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Volumn 56, Issue 1, 2014, Pages 5-12

Dynamic RNA modifications in posttranscriptional regulation

Author keywords

[No Author keywords available]

Indexed keywords

BINDING PROTEIN; MESSENGER RNA; PSEUDOURIDINE; RIBOSOME RNA; RNA; TRANSFER RNA; UNTRANSLATED RNA;

EID: 84922394767     PISSN: 10972765     EISSN: 10974164     Source Type: Journal    
DOI: 10.1016/j.molcel.2014.09.001     Document Type: Review
Times cited : (117)

References (90)
  • 1
    • 84864037029 scopus 로고    scopus 로고
    • RNA methylation by the MIS complex regulates a cell fate decision in yeast
    • Agarwala S.D., Blitzblau H.G., Hochwagen A., Fink G.R. RNA methylation by the MIS complex regulates a cell fate decision in yeast. PLoS Genet. 2012, 8:e1002732.
    • (2012) PLoS Genet. , vol.8 , pp. e1002732
    • Agarwala, S.D.1    Blitzblau, H.G.2    Hochwagen, A.3    Fink, G.R.4
  • 2
    • 0036529621 scopus 로고    scopus 로고
    • Comparative genomics and evolution of proteins involved in RNA metabolism
    • Anantharaman V., Koonin E.V., Aravind L. Comparative genomics and evolution of proteins involved in RNA metabolism. Nucleic Acids Res. 2002, 30:1427-1464.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 1427-1464
    • Anantharaman, V.1    Koonin, E.V.2    Aravind, L.3
  • 3
    • 0032428969 scopus 로고    scopus 로고
    • The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA
    • Anderson J., Phan L., Cuesta R., Carlson B.A., Pak M., Asano K., Björk G.R., Tamame M., Hinnebusch A.G. The essential Gcd10p-Gcd14p nuclear complex is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA. Genes Dev. 1998, 12:3650-3662.
    • (1998) Genes Dev. , vol.12 , pp. 3650-3662
    • Anderson, J.1    Phan, L.2    Cuesta, R.3    Carlson, B.A.4    Pak, M.5    Asano, K.6    Björk, G.R.7    Tamame, M.8    Hinnebusch, A.G.9
  • 4
    • 0028071999 scopus 로고
    • Clustering of pseudouridine residues around the peptidyltransferase center of yeast cytoplasmic and mitochondrial ribosomes
    • Bakin A., Lane B.G., Ofengand J. Clustering of pseudouridine residues around the peptidyltransferase center of yeast cytoplasmic and mitochondrial ribosomes. Biochemistry 1994, 33:13475-13483.
    • (1994) Biochemistry , vol.33 , pp. 13475-13483
    • Bakin, A.1    Lane, B.G.2    Ofengand, J.3
  • 5
    • 34249868208 scopus 로고    scopus 로고
    • Optimization of ribosome structure and function by rRNA base modification
    • Baxter-Roshek J.L., Petrov A.N., Dinman J.D. Optimization of ribosome structure and function by rRNA base modification. PLoS ONE 2007, 2:e174.
    • (2007) PLoS ONE , vol.2 , pp. e174
    • Baxter-Roshek, J.L.1    Petrov, A.N.2    Dinman, J.D.3
  • 7
    • 0034602703 scopus 로고    scopus 로고
    • Competition between a sterol biosynthetic enzyme and tRNA modification in addition to changes in the protein synthesis machinery causes altered nonsense suppression
    • Benko A.L., Vaduva G., Martin N.C., Hopper A.K. Competition between a sterol biosynthetic enzyme and tRNA modification in addition to changes in the protein synthesis machinery causes altered nonsense suppression. Proc. Natl. Acad. Sci. USA 2000, 97:61-66.
    • (2000) Proc. Natl. Acad. Sci. USA , vol.97 , pp. 61-66
    • Benko, A.L.1    Vaduva, G.2    Martin, N.C.3    Hopper, A.K.4
  • 8
    • 82255168340 scopus 로고    scopus 로고
    • The biosynthesis and functional roles of methylated nucleosides in eukaryotic mRNA
    • Sprinter, New York, H. Grosjean (Ed.)
    • Bokar J.A. The biosynthesis and functional roles of methylated nucleosides in eukaryotic mRNA. Fine-Tuning of RNA Functions by Modidcation and Editing 2005, 141-177. Sprinter, New York. H. Grosjean (Ed.).
    • (2005) Fine-Tuning of RNA Functions by Modidcation and Editing , pp. 141-177
    • Bokar, J.A.1
  • 9
    • 0028242885 scopus 로고
    • Characterization and partial purification of mRNA N6-adenosine methyltransferase from HeLa cell nuclei. Internal mRNA methylation requires a multisubunit complex
    • Bokar J.A., Rath-Shambaugh M.E., Ludwiczak R., Narayan P., Rottman F. Characterization and partial purification of mRNA N6-adenosine methyltransferase from HeLa cell nuclei. Internal mRNA methylation requires a multisubunit complex. J.Biol. Chem. 1994, 269:17697-17704.
    • (1994) J.Biol. Chem. , vol.269 , pp. 17697-17704
    • Bokar, J.A.1    Rath-Shambaugh, M.E.2    Ludwiczak, R.3    Narayan, P.4    Rottman, F.5
  • 10
    • 0030712151 scopus 로고    scopus 로고
    • Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase
    • Bokar J.A., Shambaugh M.E., Polayes D., Matera A.G., Rottman F.M. Purification and cDNA cloning of the AdoMet-binding subunit of the human mRNA (N6-adenosine)-methyltransferase. RNA 1997, 3:1233-1247.
    • (1997) RNA , vol.3 , pp. 1233-1247
    • Bokar, J.A.1    Shambaugh, M.E.2    Polayes, D.3    Matera, A.G.4    Rottman, F.M.5
  • 11
    • 84922180958 scopus 로고    scopus 로고
    • Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells
    • Published online September 5, 2014
    • Carlile T.M., Rojas-Duran M.F., Zinshteyn B., Shin H., Bartoli K.M., Gilbert W.V. Pseudouridine profiling reveals regulated mRNA pseudouridylation in yeast and human cells. Nature 2014, Published online September 5, 2014. 10.1038/nature13802.
    • (2014) Nature
    • Carlile, T.M.1    Rojas-Duran, M.F.2    Zinshteyn, B.3    Shin, H.4    Bartoli, K.M.5    Gilbert, W.V.6
  • 12
    • 0025193111 scopus 로고
    • N6-methyladenosine residues in an intron-specific region of prolactin pre-mRNA
    • Carroll S.M., Narayan P., Rottman F.M. N6-methyladenosine residues in an intron-specific region of prolactin pre-mRNA. Mol. Cell. Biol. 1990, 10:4456-4465.
    • (1990) Mol. Cell. Biol. , vol.10 , pp. 4456-4465
    • Carroll, S.M.1    Narayan, P.2    Rottman, F.M.3
  • 13
    • 78650683942 scopus 로고    scopus 로고
    • A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress
    • Chan C.T., Dyavaiah M., DeMott M.S., Taghizadeh K., Dedon P.C., Begley T.J. A quantitative systems approach reveals dynamic control of tRNA modifications during cellular stress. PLoS Genet. 2010, 6:e1001247.
    • (2010) PLoS Genet. , vol.6 , pp. e1001247
    • Chan, C.T.1    Dyavaiah, M.2    DeMott, M.S.3    Taghizadeh, K.4    Dedon, P.C.5    Begley, T.J.6
  • 14
    • 84864828979 scopus 로고    scopus 로고
    • Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins
    • Chan C.T., Pang Y.L., Deng W., Babu I.R., Dyavaiah M., Begley T.J., Dedon P.C. Reprogramming of tRNA modifications controls the oxidative stress response by codon-biased translation of proteins. Nat. Commun. 2012, 3:937.
    • (2012) Nat. Commun. , vol.3 , pp. 937
    • Chan, C.T.1    Pang, Y.L.2    Deng, W.3    Babu, I.R.4    Dyavaiah, M.5    Begley, T.J.6    Dedon, P.C.7
  • 15
    • 0037109157 scopus 로고    scopus 로고
    • Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: a potential mechanism for the activity of the IME4 gene
    • Clancy M.J., Shambaugh M.E., Timpte C.S., Bokar J.A. Induction of sporulation in Saccharomyces cerevisiae leads to the formation of N6-methyladenosine in mRNA: a potential mechanism for the activity of the IME4 gene. Nucleic Acids Res. 2002, 30:4509-4518.
    • (2002) Nucleic Acids Res. , vol.30 , pp. 4509-4518
    • Clancy, M.J.1    Shambaugh, M.E.2    Timpte, C.S.3    Bokar, J.A.4
  • 18
    • 0029566314 scopus 로고
    • Stabilization of RNA stacking by pseudouridine
    • Davis D.R. Stabilization of RNA stacking by pseudouridine. Nucleic Acids Res. 1995, 23:5020-5026.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 5020-5026
    • Davis, D.R.1
  • 19
    • 0000568977 scopus 로고
    • Ribonucleic acids from yeast which contain a fifth nucleotide
    • Davis F.F., Allen F.W. Ribonucleic acids from yeast which contain a fifth nucleotide. J.Biol. Chem. 1957, 227:907-915.
    • (1957) J.Biol. Chem. , vol.227 , pp. 907-915
    • Davis, F.F.1    Allen, F.W.2
  • 20
    • 0036629250 scopus 로고    scopus 로고
    • RRNA modifications and ribosome function
    • Decatur W.A., Fournier M.J. rRNA modifications and ribosome function. Trends Biochem. Sci. 2002, 27:344-351.
    • (2002) Trends Biochem. Sci. , vol.27 , pp. 344-351
    • Decatur, W.A.1    Fournier, M.J.2
  • 21
    • 0016285746 scopus 로고
    • Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells
    • Desrosiers R., Friderici K., Rottman F. Identification of methylated nucleosides in messenger RNA from Novikoff hepatoma cells. Proc. Natl. Acad. Sci. USA 1974, 71:3971-3975.
    • (1974) Proc. Natl. Acad. Sci. USA , vol.71 , pp. 3971-3975
    • Desrosiers, R.1    Friderici, K.2    Rottman, F.3
  • 22
    • 0016751899 scopus 로고
    • Characterization of Novikoff hepatoma mRNA methylation and heterogeneity in the methylated 5' terminus
    • Desrosiers R.C., Friderici K.H., Rottman F.M. Characterization of Novikoff hepatoma mRNA methylation and heterogeneity in the methylated 5' terminus. Biochemistry 1975, 14:4367-4374.
    • (1975) Biochemistry , vol.14 , pp. 4367-4374
    • Desrosiers, R.C.1    Friderici, K.H.2    Rottman, F.M.3
  • 23
    • 35748949345 scopus 로고    scopus 로고
    • Role of the 5'-cap in the biogenesis of spliceosomal snRNPs
    • Sprinter, New York, H. Grosjean (Ed.)
    • Dickmanns A., Ficner R. Role of the 5'-cap in the biogenesis of spliceosomal snRNPs. Fine-Tuning of RNA Functions by Modidcation and Editing 2005, 179-204. Sprinter, New York. H. Grosjean (Ed.).
    • (2005) Fine-Tuning of RNA Functions by Modidcation and Editing , pp. 179-204
    • Dickmanns, A.1    Ficner, R.2
  • 25
    • 42449153273 scopus 로고    scopus 로고
    • Genetic variants of FTO influence adiposity, insulin sensitivity, leptin levels, and resting metabolic rate in the Quebec Family Study
    • Do R., Bailey S.D., Desbiens K., Belisle A., Montpetit A., Bouchard C., Pérusse L., Vohl M.C., Engert J.C. Genetic variants of FTO influence adiposity, insulin sensitivity, leptin levels, and resting metabolic rate in the Quebec Family Study. Diabetes 2008, 57:1147-1150.
    • (2008) Diabetes , vol.57 , pp. 1147-1150
    • Do, R.1    Bailey, S.D.2    Desbiens, K.3    Belisle, A.4    Montpetit, A.5    Bouchard, C.6    Pérusse, L.7    Vohl, M.C.8    Engert, J.C.9
  • 27
    • 84884167428 scopus 로고    scopus 로고
    • The RNA methyltransferase Dnmt2 is required for efficient Dicer-2-dependent siRNA pathway activity in Drosophila
    • Durdevic Z., Mobin M.B., Hanna K., Lyko F., Schaefer M. The RNA methyltransferase Dnmt2 is required for efficient Dicer-2-dependent siRNA pathway activity in Drosophila. Cell Rep. 2013, 4:931-937.
    • (2013) Cell Rep. , vol.4 , pp. 931-937
    • Durdevic, Z.1    Mobin, M.B.2    Hanna, K.3    Lyko, F.4    Schaefer, M.5
  • 28
    • 84879642219 scopus 로고    scopus 로고
    • Transcriptome-wide mapping of 5-methylcytidine RNA modifications in bacteria, archaea, and yeast reveals m5C within archaeal mRNAs
    • Edelheit S., Schwartz S., Mumbach M.R., Wurtzel O., Sorek R. Transcriptome-wide mapping of 5-methylcytidine RNA modifications in bacteria, archaea, and yeast reveals m5C within archaeal mRNAs. PLoS Genet. 2013, 9:e1003602.
    • (2013) PLoS Genet. , vol.9 , pp. e1003602
    • Edelheit, S.1    Schwartz, S.2    Mumbach, M.R.3    Wurtzel, O.4    Sorek, R.5
  • 29
    • 84870152928 scopus 로고    scopus 로고
    • Biosynthesis and function of posttranscriptional modifications of transfer RNAs
    • El Yacoubi B., Bailly M., de Crécy-Lagard V. Biosynthesis and function of posttranscriptional modifications of transfer RNAs. Annu. Rev. Genet. 2012, 46:69-95.
    • (2012) Annu. Rev. Genet. , vol.46 , pp. 69-95
    • El Yacoubi, B.1    Bailly, M.2    de Crécy-Lagard, V.3
  • 31
    • 78449233126 scopus 로고    scopus 로고
    • The AlkB domain of mammalian ABH8 catalyzes hydroxylation of 5-methoxycarbonylmethyluridine at the wobble position of tRNA
    • Fu Y., Dai Q., Zhang W., Ren J., Pan T., He C. The AlkB domain of mammalian ABH8 catalyzes hydroxylation of 5-methoxycarbonylmethyluridine at the wobble position of tRNA. Angew. Chem. Int. Ed. Engl. 2010, 49:8885-8888.
    • (2010) Angew. Chem. Int. Ed. Engl. , vol.49 , pp. 8885-8888
    • Fu, Y.1    Dai, Q.2    Zhang, W.3    Ren, J.4    Pan, T.5    He, C.6
  • 35
    • 0033527628 scopus 로고    scopus 로고
    • An adenosine deaminase that generates inosine at the wobble position of tRNAs
    • Gerber A.P., Keller W. An adenosine deaminase that generates inosine at the wobble position of tRNAs. Science 1999, 286:1146-1149.
    • (1999) Science , vol.286 , pp. 1146-1149
    • Gerber, A.P.1    Keller, W.2
  • 37
    • 0034547125 scopus 로고    scopus 로고
    • Deletion of the Escherichia coli pseudouridine synthase gene truB blocks formation of pseudouridine 55 in tRNA invivo, does not affect exponential growth, but confers a strong selective disadvantage in competition with wild-type cells
    • Gutgsell N., Englund N., Niu L., Kaya Y., Lane B.G., Ofengand J. Deletion of the Escherichia coli pseudouridine synthase gene truB blocks formation of pseudouridine 55 in tRNA invivo, does not affect exponential growth, but confers a strong selective disadvantage in competition with wild-type cells. RNA 2000, 6:1870-1881.
    • (2000) RNA , vol.6 , pp. 1870-1881
    • Gutgsell, N.1    Englund, N.2    Niu, L.3    Kaya, Y.4    Lane, B.G.5    Ofengand, J.6
  • 38
    • 84891280075 scopus 로고    scopus 로고
    • Identification of a selective polymerase enables detection of N(6)-methyladenosine in RNA
    • Harcourt E.M., Ehrenschwender T., Batista P.J., Chang H.Y., Kool E.T. Identification of a selective polymerase enables detection of N(6)-methyladenosine in RNA. J.Am. Chem. Soc. 2013, 135:19079-19082.
    • (2013) J.Am. Chem. Soc. , vol.135 , pp. 19079-19082
    • Harcourt, E.M.1    Ehrenschwender, T.2    Batista, P.J.3    Chang, H.Y.4    Kool, E.T.5
  • 40
    • 78649267733 scopus 로고    scopus 로고
    • Grand challenge commentary: RNA epigenetics?
    • He C. Grand challenge commentary: RNA epigenetics?. Nat. Chem. Biol. 2010, 6:863-865.
    • (2010) Nat. Chem. Biol. , vol.6 , pp. 863-865
    • He, C.1
  • 42
    • 77952340870 scopus 로고    scopus 로고
    • A commonly carried allele of the obesity-related FTO gene is associated with reduced brain volume in the healthy elderly
    • Alzheimer's Disease Neuroimaging Initiative
    • Ho A.J., Stein J.L., Hua X., Lee S., Hibar D.P., Leow A.D., Dinov I.D., Toga A.W., Saykin A.J., Shen L., et al. A commonly carried allele of the obesity-related FTO gene is associated with reduced brain volume in the healthy elderly. Proc. Natl. Acad. Sci. USA 2010, 107:8404-8409. Alzheimer's Disease Neuroimaging Initiative.
    • (2010) Proc. Natl. Acad. Sci. USA , vol.107 , pp. 8404-8409
    • Ho, A.J.1    Stein, J.L.2    Hua, X.3    Lee, S.4    Hibar, D.P.5    Leow, A.D.6    Dinov, I.D.7    Toga, A.W.8    Saykin, A.J.9    Shen, L.10
  • 43
    • 80052601644 scopus 로고    scopus 로고
    • Drosophila Inducer of MEiosis 4 (IME4) is required for Notch signaling during oogenesis
    • Hongay C.F., Orr-Weaver T.L. Drosophila Inducer of MEiosis 4 (IME4) is required for Notch signaling during oogenesis. Proc. Natl. Acad. Sci. USA 2011, 108:14855-14860.
    • (2011) Proc. Natl. Acad. Sci. USA , vol.108 , pp. 14855-14860
    • Hongay, C.F.1    Orr-Weaver, T.L.2
  • 44
    • 84877088375 scopus 로고    scopus 로고
    • Transfer RNA post-transcriptional processing, turnover, and subcellular dynamics in the yeast Saccharomyces cerevisiae
    • Hopper A.K. Transfer RNA post-transcriptional processing, turnover, and subcellular dynamics in the yeast Saccharomyces cerevisiae. Genetics 2013, 194:43-67.
    • (2013) Genetics , vol.194 , pp. 43-67
    • Hopper, A.K.1
  • 47
    • 32944454941 scopus 로고    scopus 로고
    • Design of noninflammatory synthetic siRNA mediating potent gene silencing invivo
    • Judge A.D., Bola G., Lee A.C., MacLachlan I. Design of noninflammatory synthetic siRNA mediating potent gene silencing invivo. Mol. Ther. 2006, 13:494-505.
    • (2006) Mol. Ther. , vol.13 , pp. 494-505
    • Judge, A.D.1    Bola, G.2    Lee, A.C.3    MacLachlan, I.4
  • 48
    • 0021890204 scopus 로고
    • Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing
    • Kane S.E., Beemon K. Precise localization of m6A in Rous sarcoma virus RNA reveals clustering of methylation sites: implications for RNA processing. Mol. Cell. Biol. 1985, 5:2298-2306.
    • (1985) Mol. Cell. Biol. , vol.5 , pp. 2298-2306
    • Kane, S.E.1    Beemon, K.2
  • 49
    • 84892164576 scopus 로고    scopus 로고
    • A novel protein, Pho92, has a conserved YTH domain and regulates phosphate metabolism by decreasing the mRNA stability of PHO4 in Saccharomyces cerevisiae
    • Kang H.J., Jeong S.J., Kim K.N., Baek I.J., Chang M., Kang C.M., Park Y.S., Yun C.W. A novel protein, Pho92, has a conserved YTH domain and regulates phosphate metabolism by decreasing the mRNA stability of PHO4 in Saccharomyces cerevisiae. Biochem. J. 2014, 457:391-400.
    • (2014) Biochem. J. , vol.457 , pp. 391-400
    • Kang, H.J.1    Jeong, S.J.2    Kim, K.N.3    Baek, I.J.4    Chang, M.5    Kang, C.M.6    Park, Y.S.7    Yun, C.W.8
  • 50
    • 79959284255 scopus 로고    scopus 로고
    • Converting nonsense codons into sense codons by targeted pseudouridylation
    • Karijolich J., Yu Y.T. Converting nonsense codons into sense codons by targeted pseudouridylation. Nature 2011, 474:395-398.
    • (2011) Nature , vol.474 , pp. 395-398
    • Karijolich, J.1    Yu, Y.T.2
  • 51
    • 0026524798 scopus 로고
    • Conformational rigidity of specific pyrimidine residues in tRNA arises from posttranscriptional modifications that enhance steric interaction between the base and the 2'-hydroxyl group
    • Kawai G., Yamamoto Y., Kamimura T., Masegi T., Sekine M., Hata T., Iimori T., Watanabe T., Miyazawa T., Yokoyama S. Conformational rigidity of specific pyrimidine residues in tRNA arises from posttranscriptional modifications that enhance steric interaction between the base and the 2'-hydroxyl group. Biochemistry 1992, 31:1040-1046.
    • (1992) Biochemistry , vol.31 , pp. 1040-1046
    • Kawai, G.1    Yamamoto, Y.2    Kamimura, T.3    Masegi, T.4    Sekine, M.5    Hata, T.6    Iimori, T.7    Watanabe, T.8    Miyazawa, T.9    Yokoyama, S.10
  • 52
    • 79951867607 scopus 로고    scopus 로고
    • The obesity related gene, FTO, interacts with APOE, and is associated with Alzheimer's disease risk: a prospective cohort study
    • Keller L., Xu W.L., Wang H.X., Winblad B., Fratiglioni L., Graff C. The obesity related gene, FTO, interacts with APOE, and is associated with Alzheimer's disease risk: a prospective cohort study. J.Alzheimers Dis. 2011, 23:461-469.
    • (2011) J.Alzheimers Dis. , vol.23 , pp. 461-469
    • Keller, L.1    Xu, W.L.2    Wang, H.X.3    Winblad, B.4    Fratiglioni, L.5    Graff, C.6
  • 53
    • 84877350071 scopus 로고    scopus 로고
    • Identification of direct targets and modified bases of RNA cytosine methyltransferases
    • Khoddami V., Cairns B.R. Identification of direct targets and modified bases of RNA cytosine methyltransferases. Nat. Biotechnol. 2013, 31:458-464.
    • (2013) Nat. Biotechnol. , vol.31 , pp. 458-464
    • Khoddami, V.1    Cairns, B.R.2
  • 55
    • 84875177348 scopus 로고    scopus 로고
    • X-inactivation, imprinting, and long noncoding RNAs in health and disease
    • Lee J.T., Bartolomei M.S. X-inactivation, imprinting, and long noncoding RNAs in health and disease. Cell 2013, 152:1308-1323.
    • (2013) Cell , vol.152 , pp. 1308-1323
    • Lee, J.T.1    Bartolomei, M.S.2
  • 56
    • 23944493378 scopus 로고    scopus 로고
    • Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis
    • Li J., Yang Z., Yu B., Liu J., Chen X. Methylation protects miRNAs and siRNAs from a 3'-end uridylation activity in Arabidopsis. Curr. Biol. 2005, 15:1501-1507.
    • (2005) Curr. Biol. , vol.15 , pp. 1501-1507
    • Li, J.1    Yang, Z.2    Yu, B.3    Liu, J.4    Chen, X.5
  • 57
    • 84888423912 scopus 로고    scopus 로고
    • Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA
    • Liu N., Parisien M., Dai Q., Zheng G.Q., He C., Pan T. Probing N6-methyladenosine RNA modification status at single nucleotide resolution in mRNA and long noncoding RNA. RNA 2013, 19:1848-1856.
    • (2013) RNA , vol.19 , pp. 1848-1856
    • Liu, N.1    Parisien, M.2    Dai, Q.3    Zheng, G.Q.4    He, C.5    Pan, T.6
  • 60
    • 84899586607 scopus 로고    scopus 로고
    • The dynamic epitranscriptome: N6-methyladenosine and gene expression control
    • Meyer K.D., Jaffrey S.R. The dynamic epitranscriptome: N6-methyladenosine and gene expression control. Nat. Rev. Mol. Cell Biol. 2014, 15:313-326.
    • (2014) Nat. Rev. Mol. Cell Biol. , vol.15 , pp. 313-326
    • Meyer, K.D.1    Jaffrey, S.R.2
  • 61
    • 84862649489 scopus 로고    scopus 로고
    • Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons
    • Meyer K.D., Saletore Y., Zumbo P., Elemento O., Mason C.E., Jaffrey S.R. Comprehensive analysis of mRNA methylation reveals enrichment in 3' UTRs and near stop codons. Cell 2012, 149:1635-1646.
    • (2012) Cell , vol.149 , pp. 1635-1646
    • Meyer, K.D.1    Saletore, Y.2    Zumbo, P.3    Elemento, O.4    Mason, C.E.5    Jaffrey, S.R.6
  • 62
    • 77956940474 scopus 로고    scopus 로고
    • The 5'-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway
    • Mitchell S.F., Walker S.E., Algire M.A., Park E.H., Hinnebusch A.G., Lorsch J.R. The 5'-7-methylguanosine cap on eukaryotic mRNAs serves both to stimulate canonical translation initiation and to block an alternative pathway. Mol. Cell 2010, 39:950-962.
    • (2010) Mol. Cell , vol.39 , pp. 950-962
    • Mitchell, S.F.1    Walker, S.E.2    Algire, M.A.3    Park, E.H.4    Hinnebusch, A.G.5    Lorsch, J.R.6
  • 63
    • 38549164687 scopus 로고    scopus 로고
    • The 3D rRNA modification maps database: with interactive tools for ribosome analysis
    • Piekna-Przybylska D., Decatur W.A., Fournier M.J. The 3D rRNA modification maps database: with interactive tools for ribosome analysis. Nucleic Acids Res. 2008, 36(Database issue):D178-D183.
    • (2008) Nucleic Acids Res. , vol.36 , Issue.DATABASE ISSUE , pp. D178-D183
    • Piekna-Przybylska, D.1    Decatur, W.A.2    Fournier, M.J.3
  • 65
    • 84872584130 scopus 로고    scopus 로고
    • TRNAHis 5-methylcytidine levels increase in response to several growth arrest conditions in Saccharomyces cerevisiae
    • Preston M.A., D'Silva S., Kon Y., Phizicky E.M. tRNAHis 5-methylcytidine levels increase in response to several growth arrest conditions in Saccharomyces cerevisiae. RNA 2013, 19:243-256.
    • (2013) RNA , vol.19 , pp. 243-256
    • Preston, M.A.1    D'Silva, S.2    Kon, Y.3    Phizicky, E.M.4
  • 66
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn J.L., Chang H.Y. Genome regulation by long noncoding RNAs. Annu. Rev. Biochem. 2012, 81:145-166.
    • (2012) Annu. Rev. Biochem. , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 67
    • 77953643795 scopus 로고    scopus 로고
    • Genome-wide analysis of N1-methyl-adenosine modification in human tRNAs
    • Saikia M., Fu Y., Pavon-Eternod M., He C., Pan T. Genome-wide analysis of N1-methyl-adenosine modification in human tRNAs. RNA 2010, 16:1317-1327.
    • (2010) RNA , vol.16 , pp. 1317-1327
    • Saikia, M.1    Fu, Y.2    Pavon-Eternod, M.3    He, C.4    Pan, T.5
  • 69
    • 84888101866 scopus 로고    scopus 로고
    • Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands
    • Schreiber J., Wescoe Z.L., Abu-Shumays R., Vivian J.T., Baatar B., Karplus K., Akeson M. Error rates for nanopore discrimination among cytosine, methylcytosine, and hydroxymethylcytosine along individual DNA strands. Proc. Natl. Acad. Sci. USA 2013, 110:18910-18915.
    • (2013) Proc. Natl. Acad. Sci. USA , vol.110 , pp. 18910-18915
    • Schreiber, J.1    Wescoe, Z.L.2    Abu-Shumays, R.3    Vivian, J.T.4    Baatar, B.5    Karplus, K.6    Akeson, M.7
  • 71
    • 84907527348 scopus 로고    scopus 로고
    • Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA
    • Published online September 10, 2014
    • Schwartz S., Bernstein D.A., Mumbach M.R., Jovanovic M., Herbst R.H., Leon-Ricardo B.X., Engreitz J.M., et al. Transcriptome-wide mapping reveals widespread dynamic-regulated pseudouridylation of ncRNA and mRNA. Cell 2014, Published online September 10, 2014. 10.1016/j.cell.2014.08.028.
    • (2014) Cell
    • Schwartz, S.1    Bernstein, D.A.2    Mumbach, M.R.3    Jovanovic, M.4    Herbst, R.H.5    Leon-Ricardo, B.X.6    Engreitz, J.M.7
  • 72
    • 0026561541 scopus 로고
    • IME4, a gene that mediates MAT and nutritional control of meiosis in Saccharomyces cerevisiae
    • Shah J.C., Clancy M.J. IME4, a gene that mediates MAT and nutritional control of meiosis in Saccharomyces cerevisiae. Mol. Cell. Biol. 1992, 12:1078-1086.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 1078-1086
    • Shah, J.C.1    Clancy, M.J.2
  • 73
    • 80555131009 scopus 로고    scopus 로고
    • Initiation factor eIF2γ promotes eIF2-GTP-Met-tRNAi(Met) ternary complex binding to the 40S ribosome
    • Shin B.S., Kim J.R., Walker S.E., Dong J., Lorsch J.R., Dever T.E. Initiation factor eIF2γ promotes eIF2-GTP-Met-tRNAi(Met) ternary complex binding to the 40S ribosome. Nat. Struct. Mol. Biol. 2011, 18:1227-1234.
    • (2011) Nat. Struct. Mol. Biol. , vol.18 , pp. 1227-1234
    • Shin, B.S.1    Kim, J.R.2    Walker, S.E.3    Dong, J.4    Lorsch, J.R.5    Dever, T.E.6
  • 75
    • 84859985750 scopus 로고    scopus 로고
    • A yeast prion, Mod5, promotes acquired drug resistance and cell survival under environmental stress
    • Suzuki G., Shimazu N., Tanaka M. A yeast prion, Mod5, promotes acquired drug resistance and cell survival under environmental stress. Science 2012, 336:355-359.
    • (2012) Science , vol.336 , pp. 355-359
    • Suzuki, G.1    Shimazu, N.2    Tanaka, M.3
  • 76
    • 70350023619 scopus 로고    scopus 로고
    • The maternal-to-zygotic transition: a play in two acts
    • Tadros W., Lipshitz H.D. The maternal-to-zygotic transition: a play in two acts. Development 2009, 136:3033-3042.
    • (2009) Development , vol.136 , pp. 3033-3042
    • Tadros, W.1    Lipshitz, H.D.2
  • 78
    • 0026463886 scopus 로고
    • Partial purification of a 6-methyladenine mRNA methyltransferase which modifies internal adenine residues
    • Tuck M.T. Partial purification of a 6-methyladenine mRNA methyltransferase which modifies internal adenine residues. Biochem. J. 1992, 288:233-240.
    • (1992) Biochem. J. , vol.288 , pp. 233-240
    • Tuck, M.T.1
  • 79
  • 80
    • 84906346430 scopus 로고    scopus 로고
    • Reading RNA methylation codes through methyl-specific binding proteins
    • Wang X., He C. Reading RNA methylation codes through methyl-specific binding proteins. RNA Biol. 2014, 11:669-672.
    • (2014) RNA Biol. , vol.11 , pp. 669-672
    • Wang, X.1    He, C.2
  • 82
    • 84893310526 scopus 로고    scopus 로고
    • N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells
    • Wang Y., Li Y., Toth J.I., Petroski M.D., Zhang Z., Zhao J.C. N6-methyladenosine modification destabilizes developmental regulators in embryonic stem cells. Nat. Cell Biol. 2014, 16:191-198.
    • (2014) Nat. Cell Biol. , vol.16 , pp. 191-198
    • Wang, Y.1    Li, Y.2    Toth, J.I.3    Petroski, M.D.4    Zhang, Z.5    Zhao, J.C.6
  • 83
    • 0017367836 scopus 로고
    • Nucleotide sequences at the N6-methyladenosine sites of HeLa cell messenger ribonucleic acid
    • Wei C.M., Moss B. Nucleotide sequences at the N6-methyladenosine sites of HeLa cell messenger ribonucleic acid. Biochemistry 1977, 16:1672-1676.
    • (1977) Biochemistry , vol.16 , pp. 1672-1676
    • Wei, C.M.1    Moss, B.2
  • 84
    • 0017296194 scopus 로고
    • 5'-Terminal and internal methylated nucleotide sequences in HeLa cell mRNA
    • Wei C.M., Gershowitz A., Moss B. 5'-Terminal and internal methylated nucleotide sequences in HeLa cell mRNA. Biochemistry 1976, 15:397-401.
    • (1976) Biochemistry , vol.15 , pp. 397-401
    • Wei, C.M.1    Gershowitz, A.2    Moss, B.3
  • 85
    • 84255209216 scopus 로고    scopus 로고
    • Cellular dynamics of RNA modification
    • Yi C., Pan T. Cellular dynamics of RNA modification. Acc. Chem. Res. 2011, 44:1380-1388.
    • (2011) Acc. Chem. Res. , vol.44 , pp. 1380-1388
    • Yi, C.1    Pan, T.2
  • 89
    • 57749089784 scopus 로고    scopus 로고
    • MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor
    • Zhong S., Li H., Bodi Z., Button J., Vespa L., Herzog M., Fray R.G. MTA is an Arabidopsis messenger RNA adenosine methylase and interacts with a homolog of a sex-specific splicing factor. Plant Cell 2008, 20:1278-1288.
    • (2008) Plant Cell , vol.20 , pp. 1278-1288
    • Zhong, S.1    Li, H.2    Bodi, Z.3    Button, J.4    Vespa, L.5    Herzog, M.6    Fray, R.G.7


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