Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis

Current Biology

Volumn 15, Issue 16, 2005, Pages 1501-1507

  Li, Junjie ^a,b   Yang, Zhiyong ^a   Yu, Bin ^a   Liu, Jun ^a,c   Chen, Xuemei ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

^b NEW YORK UNIVERSITY SCHOOL OF MEDICINE   (United States)

^c SHANGHAI UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

ARABIDOPSIS PROTEIN; CELL CYCLE PROTEIN; DCL1 PROTEIN, ARABIDOPSIS; HEN1 PROTEIN, ARABIDOPSIS; MICRORNA; RIBONUCLEASE III; SMALL INTERFERING RNA; URIDINE;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARTICLE; COMPARATIVE STUDY; GENETICS; METABOLISM; METHYLATION; MOLECULAR CLONING; MOLECULAR GENETICS; PHYSIOLOGY; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; RNA PROCESSING;

AMINO ACID SEQUENCE; ARABIDOPSIS; ARABIDOPSIS PROTEINS; CELL CYCLE PROTEINS; CLONING, MOLECULAR; METHYLATION; MICRORNAS; MOLECULAR SEQUENCE DATA; REVERSE TRANSCRIPTASE POLYMERASE CHAIN REACTION; RIBONUCLEASE III; RNA 3' END PROCESSING; RNA, SMALL INTERFERING; URIDINE;

ARABIDOPSIS;

EID: 23944493378     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2005.07.029     Document Type: Article

References (24)

1. D.P. Bartel MicroRNAs: Genomics, biogenesis, mechanism, and function Cell 116 2004 281 297
2. W. Park, J. Li, R. Song, J. Messing, and X. Chen CARPEL FACTORY, a Dicer homolog, and HEN1, a novel protein, act in microRNA metabolism in Arabidopsis thaliana Curr. Biol. 12 2002 1484 1495
3. B.J. Reinhart, E.G. Weinstein, M.W. Rhoades, B. Bartel, and D.P. Bartel MicroRNAs in plants Genes Dev. 16 2002 1616 1626
4. S. Boutet, F. Vazquez, J. Liu, C. Beclin, M. Fagard, A. Gratias, J.B. Morel, P. Crete, X. Chen, and H. Vaucheret Arabidopsis HEN1: A genetic link between endogenous miRNA controlling development and siRNA controlling transgene silencing and virus resistance Curr. Biol. 13 2003 843 848
5. M.H. Han, S. Goud, L. Song, and N. Fedoroff The Arabidopsis double-stranded RNA-binding protein HYL1 plays a role in microRNA-mediated gene regulation Proc. Natl. Acad. Sci. USA 101 2004 1093 1098
6. F. Vazquez, V. Gasciolli, P. Crete, and H. Vaucheret The nuclear dsRNA binding protein HYL1 is required for microRNA accumulation and plant development, but not posttranscriptional transgene silencing Curr. Biol. 14 2004 346 351
7. Z. Xie, L.K. Johansen, A.M. Gustafson, K.D. Kasschau, A.D. Lellis, D. Zilberman, S.E. Jacobsen, and J.C. Carrington Genetic and functional diversification of small RNA pathways in plants PLoS Biol. 2 2004 E104
8. B. Yu, Z. Yang, J. Li, S. Minakhina, M. Yang, R.W. Padgett, R. Steward, and X. Chen Methylation as a crucial step in plant microRNA biogenesis Science 307 2005 932 935
9. F. Vazquez, H. Vaucheret, R. Rajagopalan, C. Lepers, V. Gasciolli, A.C. Mallory, J.L. Hilbert, D.P. Bartel, and P. Crete Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs Mol. Cell 16 2004 69 79
10. A. Peragine, M. Yoshikawa, G. Wu, H.L. Albrecht, and R.S. Poethig SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis Genes Dev. 18 2004 2368 2379
11. R. Sunkar, and J.K. Zhu Novel and stress-regulated microRNAs and other small RNAs from Arabidopsis Plant Cell 16 2004 2001 2019
12. S. Alefelder, B.K. Patel, and F. Eckstein Incorporation of terminal phosphorothioates into oligonucleotides Nucleic Acids Res. 26 1998 4983 4988
13. G. Hutvágner, J. McLachlan, A.E. Pasquinelli, É. Balint, T. Tuschl, and P.D. Zamore A cellular function for the RNA-interference enzyme Dicer in the maturation of the let-7 small temporal RNA Science 293 2001 834 838
14. E.J. Chapman, A.I. Prokhnevsky, K. Gopinath, V.V. Dolja, and J.C. Carrington Viral RNA silencing suppressors inhibit the microRNA pathway at an intermediate step Genes Dev. 18 2004 1179 1186
15. P. Dunoyer, C.H. Lecellier, E.A. Parizotto, C. Himber, and O. Voinnet Probing the microRNA and small interfering RNA pathways with virus-encoded suppressors of RNA silencing Plant Cell 16 2004 1235 1250
16. Y. Tomari, C. Matranga, B. Haley, N. Martinez, and P.D. Zamore A protein sensor for siRNA asymmetry Science 306 2004 1377 1380
17. D.S. Schwarz, G. Hutvagner, T. Du, Z. Xu, N. Aronin, and P.D. Zamore Asymmetry in the assembly of the RNAi enzyme complex Cell 115 2003 199 208
18. A. Khvorova, A. Reynolds, and S.D. Jayasena Functional siRNAs and miRNAs exhibit strand bias Cell 115 2003 209 216
19. J. Liu, Y. He, R. Amasino, and X. Chen siRNAs targeting an intronic transposon in the regulation of natural flowering behavior in Arabidopsis Genes Dev. 18 2004 2873 2878
20. C.F. Chuang, and E.M. Meyerowitz Specific and heritable genetic interference by double-stranded RNA in Arabidopsis thaliana Proc. Natl. Acad. Sci. USA 97 2000 4985 4990
21. C. Beclin, S. Boutet, P. Waterhouse, and H. Vaucheret A branched pathway for transgene-induced RNA silencing in plants Curr. Biol. 12 2002 684 688
22. E. Allen, Z. Xie, A.M. Gustafson, and J.C. Carrington microRNA-directed phasing during trans-acting siRNA biogenesis in plants Cell 121 2005 207 221
23. B. Shen, and H.M. Goodman Uridine addition after microRNA-directed cleavage Science 306 2004 997
24. Y. Lee, K. Jeon, J.-T. Lee, S. Kim, and V.N. Kim MicroRNA maturation: Stepwise processing and subcellular localization EMBO J. 21 2002 4663 4670