-
1
-
-
0026612385
-
Influenza Virus M2 Protein has Ion Channel Activity
-
Pinto, L. H.; Holsinger, L. J.; Lamb, R. A. Influenza Virus M2 Protein has Ion Channel Activity Cell 1992, 69 (3) 517-528
-
(1992)
Cell
, vol.69
, Issue.3
, pp. 517-528
-
-
Pinto, L.H.1
Holsinger, L.J.2
Lamb, R.A.3
-
2
-
-
0034708477
-
Mechanism for Proton Conduction of the M(2) Ion Channel of Influenza A Virus
-
Mould, J. A.; Li, H. C.; Dudlak, C. S.; Lear, J. D.; Pekosz, A.; Lamb, R. A.; Pinto, L. H. Mechanism for Proton Conduction of the M(2) Ion Channel of Influenza A Virus J. Biol. Chem. 2000, 275 (12) 8592-8599
-
(2000)
J. Biol. Chem.
, vol.275
, Issue.12
, pp. 8592-8599
-
-
Mould, J.A.1
Li, H.C.2
Dudlak, C.S.3
Lear, J.D.4
Pekosz, A.5
Lamb, R.A.6
Pinto, L.H.7
-
3
-
-
0034612883
-
Permeation and Activation of the M2 Ion Channel of Influenza A Virus
-
Mould, J. A.; Drury, J. E.; Frings, S. M.; Kaupp, U. B.; Pekosz, A.; Lamb, R. A.; Pinto, L. H. Permeation and Activation of the M2 Ion Channel of Influenza A Virus J. Biol. Chem. 2000, 275 (40) 31038-31050
-
(2000)
J. Biol. Chem.
, vol.275
, Issue.40
, pp. 31038-31050
-
-
Mould, J.A.1
Drury, J.E.2
Frings, S.M.3
Kaupp, U.B.4
Pekosz, A.5
Lamb, R.A.6
Pinto, L.H.7
-
4
-
-
0030881872
-
A Functionally Defined Model for the M-2 Proton Channel of Influenza A Virus Suggests a Mechanism for its Ion Selectivity
-
Pinto, L. H.; Dieckmann, G. R.; Gandhi, C. S.; Papworth, C. G.; Braman, J.; Shaughnessy, M. A.; Lear, J. D.; Lamb, R. A.; DeGrado, W. F. A Functionally Defined Model for the M-2 Proton Channel of Influenza A Virus Suggests a Mechanism for its Ion Selectivity Proc. Natl. Acad. Sci. U.S.A. 1997, 94 (21) 11301-11306
-
(1997)
Proc. Natl. Acad. Sci. U.S.A.
, vol.94
, Issue.21
, pp. 11301-11306
-
-
Pinto, L.H.1
Dieckmann, G.R.2
Gandhi, C.S.3
Papworth, C.G.4
Braman, J.5
Shaughnessy, M.A.6
Lear, J.D.7
Lamb, R.A.8
Degrado, W.F.9
-
5
-
-
67650018858
-
Identification of the Functional Core of the Influenza A Virus A/M2 Proton-selective Ion Channel
-
Ma, C. L.; Polishchuk, A. L.; Ohigashi, Y.; Stouffer, A. L.; Schon, A.; Magavern, E.; Jing, X. H.; Lear, J. D.; Freire, E.; Lamb, R. A.; DeGrado, W. F.; Pinto, L. H. Identification of the Functional Core of the Influenza A Virus A/M2 Proton-selective Ion Channel Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (30) 12283-12288
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.30
, pp. 12283-12288
-
-
Ma, C.L.1
Polishchuk, A.L.2
Ohigashi, Y.3
Stouffer, A.L.4
Schon, A.5
Magavern, E.6
Jing, X.H.7
Lear, J.D.8
Freire, E.9
Lamb, R.A.10
Degrado, W.F.11
Pinto, L.H.12
-
6
-
-
0027963402
-
Neutron-Diffraction Reveals the Site of Amantadine Blockade in the Influenza-a M2 Ion-Channel
-
Duff, K. C.; Gilchrist, P. J.; Saxena, A. M.; Bradshaw, J. P. Neutron-Diffraction Reveals the Site of Amantadine Blockade in the Influenza-a M2 Ion-Channel Virology 1994, 202 (1) 287-293
-
(1994)
Virology
, vol.202
, Issue.1
, pp. 287-293
-
-
Duff, K.C.1
Gilchrist, P.J.2
Saxena, A.M.3
Bradshaw, J.P.4
-
7
-
-
41149097104
-
Structural Basis for the Function and Inhibition of an Influenza Virus Proton Channel (vol 451, pg 596, 2008)
-
Stouffer, A. L.; Acharya, R.; Salom, D.; Levine, A. S.; Di Costanzo, L.; Soto, C. S.; Tereshko, V.; Nanda, V.; Stayrook, S.; DeGrado, W. F. Structural Basis for the Function and Inhibition of an Influenza Virus Proton Channel (vol 451, pg 596, 2008) Nature 2008, 452 (7185) 380-380
-
(2008)
Nature
, vol.452
, Issue.7185
, pp. 380-380
-
-
Stouffer, A.L.1
Acharya, R.2
Salom, D.3
Levine, A.S.4
Di Costanzo, L.5
Soto, C.S.6
Tereshko, V.7
Nanda, V.8
Stayrook, S.9
Degrado, W.F.10
-
8
-
-
77956996035
-
Structure and Mechanism of Proton Transport through the Transmembrane Tetrameric M2 Protein Bundle of the Influenza A Virus
-
Acharya, R.; Carnevale, V.; Fiorin, G.; Levine, B. G.; Polishchuk, A. L.; Balannik, V.; Samish, I.; Lamb, R. A.; Pinto, L. H.; DeGrado, W. F.; Klein, M. L. Structure and Mechanism of Proton Transport through the Transmembrane Tetrameric M2 Protein Bundle of the Influenza A Virus Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (34) 15075-15080
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, Issue.34
, pp. 15075-15080
-
-
Acharya, R.1
Carnevale, V.2
Fiorin, G.3
Levine, B.G.4
Polishchuk, A.L.5
Balannik, V.6
Samish, I.7
Lamb, R.A.8
Pinto, L.H.9
Degrado, W.F.10
Klein, M.L.11
-
9
-
-
77958156306
-
Insight into the Mechanism of the Influenza A Proton Channel from a Structure in a Lipid Bilayer
-
Sharma, M.; Yi, M. G.; Dong, H.; Qin, H. J.; Peterson, E.; Busath, D. D.; Zhou, H. X.; Cross, T. A. Insight into the Mechanism of the Influenza A Proton Channel from a Structure in a Lipid Bilayer Science 2010, 330 (6003) 509-512
-
(2010)
Science
, vol.330
, Issue.6003
, pp. 509-512
-
-
Sharma, M.1
Yi, M.G.2
Dong, H.3
Qin, H.J.4
Peterson, E.5
Busath, D.D.6
Zhou, H.X.7
Cross, T.A.8
-
10
-
-
33646494326
-
Histidines, Heart of the Hydrogen Ion Channel from Influenza A Virus: Toward an Understanding of Conductance and Proton Selectivity
-
Hu, J.; Fu, R.; Nishimura, K.; Zhang, L.; Zhou, H. X.; Busath, D. D.; Vijayvergiya, V.; Cross, T. A. Histidines, Heart of the Hydrogen Ion Channel from Influenza A Virus: Toward an Understanding of Conductance and Proton Selectivity Proc. Natl. Acad. Sci. U.S.A. 2006, 103 (18) 6865-6870
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, Issue.18
, pp. 6865-6870
-
-
Hu, J.1
Fu, R.2
Nishimura, K.3
Zhang, L.4
Zhou, H.X.5
Busath, D.D.6
Vijayvergiya, V.7
Cross, T.A.8
-
11
-
-
77958162674
-
Mechanisms of Proton Conduction and Gating in Influenza M2 Proton Channels from Solid-State NMR
-
Hu, F. H.; Luo, W. B.; Hong, M. Mechanisms of Proton Conduction and Gating in Influenza M2 Proton Channels from Solid-State NMR Science 2010, 330 (6003) 505-508
-
(2010)
Science
, vol.330
, Issue.6003
, pp. 505-508
-
-
Hu, F.H.1
Luo, W.B.2
Hong, M.3
-
12
-
-
76249125649
-
Structure of the Amantadine Binding Site of Influenza M2 Proton Channels in Lipid Bilayers
-
Cady, S. D.; Schmidt-Rohr, K.; Wang, J.; Soto, C. S.; DeGrado, W. F.; Hong, M. Structure of the Amantadine Binding Site of Influenza M2 Proton Channels in Lipid Bilayers Nature 2010, 463 (7281) 689-U127
-
(2010)
Nature
, vol.463
, Issue.7281
, pp. 689-U127
-
-
Cady, S.D.1
Schmidt-Rohr, K.2
Wang, J.3
Soto, C.S.4
Degrado, W.F.5
Hong, M.6
-
13
-
-
67650485535
-
Mechanism of Drug Inhibition and Drug Resistance of Influenza A M2 Channel (vol 106, pg 7379, 2009)
-
Pielak, R. M.; Schnell, J. R.; Chou, J. J. Mechanism of Drug Inhibition and Drug Resistance of Influenza A M2 Channel (vol 106, pg 7379, 2009) Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (27) 11425-11425
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.27
, pp. 11425-11425
-
-
Pielak, R.M.1
Schnell, J.R.2
Chou, J.J.3
-
14
-
-
38749106195
-
Structure and Mechanism of the M2 Proton Channel of Influenza A virus
-
Schnell, J. R.; Chou, J. J. Structure and Mechanism of the M2 Proton Channel of Influenza A virus Nature 2008, 451 (7178) 591-U12
-
(2008)
Nature
, vol.451
, Issue.7178
, pp. 591-U12
-
-
Schnell, J.R.1
Chou, J.J.2
-
15
-
-
84872875683
-
Structure and Inhibition of the Drug-resistant S31N Mutant of the M2 Ion Channel of Influenza A Virus
-
Wang, J.; Wu, Y. B.; Ma, C. L.; Fiorin, G.; Wang, J. Z.; Pinto, L. H.; Lamb, R. A.; Klein, M. L.; DeGrado, W. F. Structure and Inhibition of the Drug-resistant S31N Mutant of the M2 Ion Channel of Influenza A Virus Proc. Natl. Acad. Sci. U.S.A. 2013, 110 (4) 1315-1320
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, Issue.4
, pp. 1315-1320
-
-
Wang, J.1
Wu, Y.B.2
Ma, C.L.3
Fiorin, G.4
Wang, J.Z.5
Pinto, L.H.6
Lamb, R.A.7
Klein, M.L.8
Degrado, W.F.9
-
16
-
-
84860797609
-
Magic-Angle-Spinning NMR of the Drug Resistant S31N M2 Proton Transporter from Influenza A
-
Andreas, L. B.; Eddy, M. T.; Chou, J. J.; Griffin, R. G. Magic-Angle-Spinning NMR of the Drug Resistant S31N M2 Proton Transporter from Influenza A J. Am. Chem. Soc. 2012, 134 (17) 7215-7218
-
(2012)
J. Am. Chem. Soc.
, vol.134
, Issue.17
, pp. 7215-7218
-
-
Andreas, L.B.1
Eddy, M.T.2
Chou, J.J.3
Griffin, R.G.4
-
17
-
-
80051595050
-
Molecular Dynamics Simulation Directed Rational Design of Inhibitors Targeting Drug-Resistant Mutants of Influenza A Virus M2
-
Wang, J.; Ma, C. L.; Fiorin, G.; Carnevale, V.; Wang, T.; Hu, F. H.; Lamb, R. A.; Pinto, L. H.; Hong, M.; Kein, M. L.; DeGrado, W. F. Molecular Dynamics Simulation Directed Rational Design of Inhibitors Targeting Drug-Resistant Mutants of Influenza A Virus M2 J. Am. Chem. Soc. 2011, 133 (32) 12834-12841
-
(2011)
J. Am. Chem. Soc.
, vol.133
, Issue.32
, pp. 12834-12841
-
-
Wang, J.1
Ma, C.L.2
Fiorin, G.3
Carnevale, V.4
Wang, T.5
Hu, F.H.6
Lamb, R.A.7
Pinto, L.H.8
Hong, M.9
Kein, M.L.10
Degrado, W.F.11
-
18
-
-
78650116811
-
Multiple Proton Confinement in the M2 Channel from the Influenza A Virus
-
Carnevale, V.; Fiorin, G.; Levine, B. G.; DeGrado, W. F.; Klein, M. L. Multiple Proton Confinement in the M2 Channel from the Influenza A Virus J. Phys. Chem. C 2010, 114 (48) 20856-20863
-
(2010)
J. Phys. Chem. C
, vol.114
, Issue.48
, pp. 20856-20863
-
-
Carnevale, V.1
Fiorin, G.2
Levine, B.G.3
Degrado, W.F.4
Klein, M.L.5
-
19
-
-
59049103481
-
Molecular Dynamics Calculations suggest a Conduction Mechanism for the M2 Proton Channel from Influenza A Virus
-
Khurana, E.; Dal Peraro, M.; DeVane, R.; Vemparala, S.; DeGrado, W. F.; Klein, M. L. Molecular Dynamics Calculations suggest a Conduction Mechanism for the M2 Proton Channel from Influenza A Virus Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (4) 1069-1074
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.4
, pp. 1069-1074
-
-
Khurana, E.1
Dal Peraro, M.2
Devane, R.3
Vemparala, S.4
Degrado, W.F.5
Klein, M.L.6
-
20
-
-
84878779397
-
Ab Initio Calculations and Validation of the pH-dependent Structures of the His37-Trp41 Quartet, the Heart of Acid Activation and Proton Conductance in the M2 Protein of Influenza A Virus
-
Dong, H.; Yi, M.; Cross, T. A.; Zhou, H. X. Ab Initio Calculations and Validation of the pH-dependent Structures of the His37-Trp41 Quartet, the Heart of Acid Activation and Proton Conductance in the M2 Protein of Influenza A Virus Chem. Sci. 2013, 4 (7) 2776-2787
-
(2013)
Chem. Sci.
, vol.4
, Issue.7
, pp. 2776-2787
-
-
Dong, H.1
Yi, M.2
Cross, T.A.3
Zhou, H.X.4
-
21
-
-
69549104773
-
Conformational Heterogeneity of the M2 Proton Channel and a Structural Model for Channel Activation
-
Yi, M. G.; Cross, T. A.; Zhou, H. X. Conformational Heterogeneity of the M2 Proton Channel and a Structural Model for Channel Activation Proc. Natl. Acad. Sci. U.S.A. 2009, 106 (32) 13311-13316
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, Issue.32
, pp. 13311-13316
-
-
Yi, M.G.1
Cross, T.A.2
Zhou, H.X.3
-
22
-
-
77956364593
-
Computational Study of Drug Binding to the Membrane-bound Tetrameric M2 Peptide Bundle from Influenza A Virus
-
Khurana, E.; Devane, R. H.; Dal Peraro, M.; Klein, M. L. Computational Study of Drug Binding to the Membrane-bound Tetrameric M2 Peptide Bundle from Influenza A Virus Biochim. Biophys. Acta 2011, 1808 (2) 530-537
-
(2011)
Biochim. Biophys. Acta
, vol.1808
, Issue.2
, pp. 530-537
-
-
Khurana, E.1
Devane, R.H.2
Dal Peraro, M.3
Klein, M.L.4
-
23
-
-
84921484036
-
Molecular Dynamics Study of Amantadine Inhibition of the M2 Ion Channel of Influenza a in Phospholipid Bilayers
-
Yi, M. G.; Li, C. G.; Cross, T. A.; Zhou, H. X. Molecular Dynamics Study of Amantadine Inhibition of the M2 Ion Channel of Influenza a in Phospholipid Bilayers Biophys. J. 2007, 556a-556a
-
(2007)
Biophys. J.
, pp. 556a-556a
-
-
Yi, M.G.1
Li, C.G.2
Cross, T.A.3
Zhou, H.X.4
-
24
-
-
36549041108
-
Proton Transport behavior through the Influenza A M2 Channel: Insights from Molecular Simulation
-
Chen, H.; Wu, Y.; Voth, G. A. Proton Transport behavior through the Influenza A M2 Channel: insights from Molecular Simulation Biophys. J. 2007, 93 (10) 3470-3479
-
(2007)
Biophys. J.
, vol.93
, Issue.10
, pp. 3470-3479
-
-
Chen, H.1
Wu, Y.2
Voth, G.A.3
-
25
-
-
84873623557
-
Free Energy Calculations Reveal the Origin of Binding Preference for Aminoadamantane Blockers of Influenza A/M2TM Pore
-
Gkeka, P.; Eleftheratos, S.; Kolocouris, A.; Cournia, Z. Free Energy Calculations Reveal the Origin of Binding Preference for Aminoadamantane Blockers of Influenza A/M2TM Pore J. Chem. Theory Comput. 2013, 9 (2) 1272-1281
-
(2013)
J. Chem. Theory Comput.
, vol.9
, Issue.2
, pp. 1272-1281
-
-
Gkeka, P.1
Eleftheratos, S.2
Kolocouris, A.3
Cournia, Z.4
-
26
-
-
84878033069
-
Structural Comparison of the Wild-Type and Drug-Resistant Mutants of the Influenza A M2 Proton Channel by Molecular Dynamics Simulations
-
Gu, R. X.; Liu, L. A.; Wang, Y. H.; Xu, Q.; Wei, D. Q. Structural Comparison of the Wild-Type and Drug-Resistant Mutants of the Influenza A M2 Proton Channel by Molecular Dynamics Simulations J. Phys. Chem. B 2013, 117 (20) 6042-6051
-
(2013)
J. Phys. Chem. B
, vol.117
, Issue.20
, pp. 6042-6051
-
-
Gu, R.X.1
Liu, L.A.2
Wang, Y.H.3
Xu, Q.4
Wei, D.Q.5
-
27
-
-
84887403792
-
Asp44 Stabilizes the Trp41 Gate of the M2 Proton Channel of Influenza A Virus
-
Ma, C. L.; Fiorin, G.; Carnevale, V.; Wang, J.; Lamb, R. A.; Klein, M. L.; Wu, Y. B.; Pinto, L. H.; DeGrado, W. F. Asp44 Stabilizes the Trp41 Gate of the M2 Proton Channel of Influenza A Virus Structure 2013, 21 (11) 2033-2041
-
(2013)
Structure
, vol.21
, Issue.11
, pp. 2033-2041
-
-
Ma, C.L.1
Fiorin, G.2
Carnevale, V.3
Wang, J.4
Lamb, R.A.5
Klein, M.L.6
Wu, Y.B.7
Pinto, L.H.8
Degrado, W.F.9
-
28
-
-
77956383657
-
Coexistence of Two Adamantane Binding Sites in the Influenza A M2 Ion Channel
-
Rosenberg, M. R.; Casarotto, M. G. Coexistence of Two Adamantane Binding Sites in the Influenza A M2 Ion Channel Proc. Natl. Acad. Sci. U.S.A. 2010, 107 (31) 13866-13871
-
(2010)
Proc. Natl. Acad. Sci. U.S.A.
, vol.107
, Issue.31
, pp. 13866-13871
-
-
Rosenberg, M.R.1
Casarotto, M.G.2
-
29
-
-
79953041331
-
Specific Binding of Adamantane Drugs and Direction of Their Polar Amines in the Pore of the Influenza M2 Transmembrane Domain in Lipid Bilayers and Dodecylphosphocholine Micelles Determined by NMR Spectroscopy
-
Cady, S. D.; Wang, J.; Wu, Y. B.; DeGrado, W. F.; Hong, M. Specific Binding of Adamantane Drugs and Direction of Their Polar Amines in the Pore of the Influenza M2 Transmembrane Domain in Lipid Bilayers and Dodecylphosphocholine Micelles Determined by NMR Spectroscopy J. Am. Chem. Soc. 2011, 133 (12) 4274-4284
-
(2011)
J. Am. Chem. Soc.
, vol.133
, Issue.12
, pp. 4274-4284
-
-
Cady, S.D.1
Wang, J.2
Wu, Y.B.3
Degrado, W.F.4
Hong, M.5
-
30
-
-
79960884898
-
Membrane-Dependent Effects of a Cytoplasmic Helix on the Structure and Drug Binding of the Influenza Virus M2 Protein
-
Cady, S.; Wang, T.; Hong, M. Membrane-Dependent Effects of a Cytoplasmic Helix on the Structure and Drug Binding of the Influenza Virus M2 Protein J. Am. Chem. Soc. 2011, 133 (30) 11572-11579
-
(2011)
J. Am. Chem. Soc.
, vol.133
, Issue.30
, pp. 11572-11579
-
-
Cady, S.1
Wang, T.2
Hong, M.3
-
31
-
-
75149171465
-
Functional Studies and Modeling of Pore-Lining Residue Mutants of the Influenza A Virus M2 Ion Channel
-
Balannik, V.; Carnevale, V.; Fiorin, G.; Levine, B. G.; Lamb, R. A.; Klein, M. L.; DeGrado, W. F.; Pinto, L. H. Functional Studies and Modeling of Pore-Lining Residue Mutants of the Influenza A Virus M2 Ion Channel Biochemistry 2010, 49 (4) 696-708
-
(2010)
Biochemistry
, vol.49
, Issue.4
, pp. 696-708
-
-
Balannik, V.1
Carnevale, V.2
Fiorin, G.3
Levine, B.G.4
Lamb, R.A.5
Klein, M.L.6
Degrado, W.F.7
Pinto, L.H.8
-
32
-
-
79954623305
-
Exploring the Requirements for the Hydrophobic Scaffold and Polar Amine in Inhibitors of M2 from Influenza A Virus
-
Wang, J.; Ma, C.; Balannik, V.; Pinto, L. H.; Lamb, R. A.; DeGrado, W. F. Exploring the Requirements for the Hydrophobic Scaffold and Polar Amine in Inhibitors of M2 from Influenza A Virus ACS Med. Chem. Lett. 2011, 2 (4) 307-312
-
(2011)
ACS Med. Chem. Lett.
, vol.2
, Issue.4
, pp. 307-312
-
-
Wang, J.1
Ma, C.2
Balannik, V.3
Pinto, L.H.4
Lamb, R.A.5
Degrado, W.F.6
-
33
-
-
84876266002
-
Discovery of novel Dual Inhibitors of the Wild-type and the most Prevalent Drug-resistant Mutant, S31N, of the M2 Proton Channel from Influenza A Virus
-
Wang, J.; Ma, C.; Wang, J.; Jo, H.; Canturk, B.; Fiorin, G.; Pinto, L. H.; Lamb, R. A.; Klein, M. L.; DeGrado, W. F. Discovery of novel Dual Inhibitors of the Wild-type and the most Prevalent Drug-resistant Mutant, S31N, of the M2 Proton Channel from Influenza A Virus J. Med. Chem. 2013, 56 (7) 2804-2812
-
(2013)
J. Med. Chem.
, vol.56
, Issue.7
, pp. 2804-2812
-
-
Wang, J.1
Ma, C.2
Wang, J.3
Jo, H.4
Canturk, B.5
Fiorin, G.6
Pinto, L.H.7
Lamb, R.A.8
Klein, M.L.9
Degrado, W.F.10
-
34
-
-
77954088453
-
Interaction of Aminoadamantane Derivatives with the Influenza A Virus M2 Channel-Docking using a Pore Blocking Model
-
Eleftheratos, S.; Spearpoint, P.; Ortore, G.; Kolocouris, A.; Martinelli, A.; Martin, S.; Hay, A. Interaction of Aminoadamantane Derivatives with the Influenza A Virus M2 Channel-Docking using a Pore Blocking Model Bioorg. Med. Chem. Lett. 2010, 20 (14) 4182-4187
-
(2010)
Bioorg. Med. Chem. Lett.
, vol.20
, Issue.14
, pp. 4182-4187
-
-
Eleftheratos, S.1
Spearpoint, P.2
Ortore, G.3
Kolocouris, A.4
Martinelli, A.5
Martin, S.6
Hay, A.7
-
35
-
-
84902455679
-
Aminoadamantanes with Persistent in Vitro Efficacy against H1N1 (2009) Influenza A
-
Kolocouris, A.; Tzitzoglaki, C.; Johnson, F. B.; Zell, R.; Wright, A. K.; Cross, T. A.; Tietjen, I.; Fedida, D.; Busath, D. D. Aminoadamantanes with Persistent in Vitro Efficacy against H1N1 (2009) Influenza A J. Med. Chem. 2014, 57, 4629-4639
-
(2014)
J. Med. Chem.
, vol.57
, pp. 4629-4639
-
-
Kolocouris, A.1
Tzitzoglaki, C.2
Johnson, F.B.3
Zell, R.4
Wright, A.K.5
Cross, T.A.6
Tietjen, I.7
Fedida, D.8
Busath, D.D.9
-
36
-
-
84904338014
-
Easily Accessible Polycyclic Amines that Inhibit the Wild-Type and Amantadine-Resistant Mutants of the M2 Channel of Influenza A Virus
-
Rey-Carrizo, M.; Barniol-Xicota, M.; Ma, C.; Frigolé-Vivas, M.; Torres, E.; Naesens, L.; Llabrés, S.; Juárez-Jiménez, J.; Luque, F. J.; DeGrado, W. F.; Lamb, R. A.; Pinto, L. H.; Vázquez, S. Easily Accessible Polycyclic Amines that Inhibit the Wild-Type and Amantadine-Resistant Mutants of the M2 Channel of Influenza A Virus J. Med. Chem. 2014, 5738
-
(2014)
J. Med. Chem.
, pp. 5738
-
-
Rey-Carrizo, M.1
Barniol-Xicota, M.2
Ma, C.3
Frigolé-Vivas, M.4
Torres, E.5
Naesens, L.6
Llabrés, S.7
Juárez-Jiménez, J.8
Luque, F.J.9
Degrado, W.F.10
Lamb, R.A.11
Pinto, L.H.12
Vázquez, S.13
-
37
-
-
67650540781
-
Discovery of Spiro-Piperidine Inhibitors and Their Modulation of the Dynamics of the M2 Proton Channel from Influenza A Virus
-
Wang, J.; Cady, S. D.; Balannik, V.; Pinto, L. H.; DeGrado, W. F.; Hong, M. Discovery of Spiro-Piperidine Inhibitors and Their Modulation of the Dynamics of the M2 Proton Channel from Influenza A Virus J. Am. Chem. Soc. 2009, 131 (23) 8066-8076
-
(2009)
J. Am. Chem. Soc.
, vol.131
, Issue.23
, pp. 8066-8076
-
-
Wang, J.1
Cady, S.D.2
Balannik, V.3
Pinto, L.H.4
Degrado, W.F.5
Hong, M.6
-
38
-
-
0242593434
-
Development and Current Status of the CHARMM Force Field for Nucleic Acids
-
MacKerell, A. D.; Banavali, N.; Foloppe, N. Development and Current Status of the CHARMM Force Field for Nucleic Acids Biopolymers 2000, 56 (4) 257-265
-
(2000)
Biopolymers
, vol.56
, Issue.4
, pp. 257-265
-
-
Mackerell, A.D.1
Banavali, N.2
Foloppe, N.3
-
39
-
-
77953377650
-
Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types
-
Klauda, J. B.; Venable, R. M.; Freites, J. A.; OConnor, J. W.; Tobias, D. J.; Mondragon-Ramirez, C.; Vorobyov, I.; MacKerell, A. D.; Pastor, R. W. Update of the CHARMM All-Atom Additive Force Field for Lipids: Validation on Six Lipid Types J. Phys. Chem. B 2010, 114 (23) 7830-7843
-
(2010)
J. Phys. Chem. B
, vol.114
, Issue.23
, pp. 7830-7843
-
-
Klauda, J.B.1
Venable, R.M.2
Freites, J.A.3
Oconnor, J.W.4
Tobias, D.J.5
Mondragon-Ramirez, C.6
Vorobyov, I.7
Mackerell, A.D.8
Pastor, R.W.9
-
40
-
-
76249087938
-
CHARMM General Force Field: A Force Field for Drug-Like Molecules Compatible with the CHARMM All-Atom Additive Biological Force Fields
-
Vanommeslaeghe, K.; Hatcher, E.; Acharya, C.; Kundu, S.; Zhong, S.; Shim, J.; Darian, E.; Guvench, O.; Lopes, P.; Vorobyov, I.; MacKerell, A. D. CHARMM General Force Field: A Force Field for Drug-Like Molecules Compatible with the CHARMM All-Atom Additive Biological Force Fields J. Comput. Chem. 2010, 31 (4) 671-690
-
(2010)
J. Comput. Chem.
, vol.31
, Issue.4
, pp. 671-690
-
-
Vanommeslaeghe, K.1
Hatcher, E.2
Acharya, C.3
Kundu, S.4
Zhong, S.5
Shim, J.6
Darian, E.7
Guvench, O.8
Lopes, P.9
Vorobyov, I.10
Mackerell, A.D.11
-
41
-
-
0004016501
-
Comparison of simple Potential Functions for Simulating Liquid Water
-
Jorgensen, W. L.; Chandrasekhar, J.; Madura, J. D.; Impey, R. W.; Klein, M. L. Comparison of simple Potential Functions for Simulating Liquid Water J. Chem. Phys. 1983, 79, 926-935
-
(1983)
J. Chem. Phys.
, vol.79
, pp. 926-935
-
-
Jorgensen, W.L.1
Chandrasekhar, J.2
Madura, J.D.3
Impey, R.W.4
Klein, M.L.5
-
42
-
-
27344436659
-
Scalable Molecular Dynamics with NAMD
-
Phillips, J. C.; Braun, R.; Wang, W.; Gumbart, J.; Tajkhorshid, E.; Villa, E.; Chipot, C.; Skeel, R. D.; Kale, L.; Schulten, K. Scalable Molecular Dynamics with NAMD J. Comput. Chem. 2005, 26 (16) 1781-1802
-
(2005)
J. Comput. Chem.
, vol.26
, Issue.16
, pp. 1781-1802
-
-
Phillips, J.C.1
Braun, R.2
Wang, W.3
Gumbart, J.4
Tajkhorshid, E.5
Villa, E.6
Chipot, C.7
Skeel, R.D.8
Kale, L.9
Schulten, K.10
-
43
-
-
36449003554
-
Constant-Pressure Molecular-Dynamics Algorithms
-
Martyna, G. J.; Tobias, D. J.; Klein, M. L. Constant-Pressure Molecular-Dynamics Algorithms J. Chem. Phys. 1994, 101 (5) 4177-4189
-
(1994)
J. Chem. Phys.
, vol.101
, Issue.5
, pp. 4177-4189
-
-
Martyna, G.J.1
Tobias, D.J.2
Klein, M.L.3
-
44
-
-
36449007836
-
Constant-Pressure Molecular-Dynamics Simulation - The Langevin Piston Method
-
Feller, S. E.; Zhang, Y. H.; Pastor, R. W.; Brooks, B. R. Constant-Pressure Molecular-Dynamics Simulation-the Langevin Piston Method J. Chem. Phys. 1995, 103 (11) 4613-4621
-
(1995)
J. Chem. Phys.
, vol.103
, Issue.11
, pp. 4613-4621
-
-
Feller, S.E.1
Zhang, Y.H.2
Pastor, R.W.3
Brooks, B.R.4
-
46
-
-
84889585833
-
Using Collective variables to Drive Molecular Dynamics Simulations
-
Fiorin, G.; Klein, M. L.; Henin, J. Using Collective variables to Drive Molecular Dynamics Simulations Mol. Phys. 2013, 111 (22-23) 3345-3362
-
(2013)
Mol. Phys.
, vol.111
, Issue.2223
, pp. 3345-3362
-
-
Fiorin, G.1
Klein, M.L.2
Henin, J.3
-
47
-
-
0033556236
-
Peptide folding: When Simulation meets Experiment
-
Daura, X.; Gademann, K.; Jaun, B.; Seebach, D.; van Gunsteren, W. F.; Mark, A. E. Peptide folding: When Simulation meets Experiment Angew. Chem., Int. Ed. 1999, 38 (1-2) 236-240
-
(1999)
Angew. Chem., Int. Ed.
, vol.38
, Issue.12
, pp. 236-240
-
-
Daura, X.1
Gademann, K.2
Jaun, B.3
Seebach, D.4
Van Gunsteren, W.F.5
Mark, A.E.6
-
48
-
-
0029878720
-
VMD: Visual Molecular Dynamics
-
Humphrey, W.; Dalke, A.; Schulten, K. VMD: Visual Molecular Dynamics J. Mol. Graphics Modell. 1996, 14 (1) 33-38
-
(1996)
J. Mol. Graphics Modell.
, vol.14
, Issue.1
, pp. 33-38
-
-
Humphrey, W.1
Dalke, A.2
Schulten, K.3
-
49
-
-
77958165108
-
The Flus Proton Escort
-
Fiorin, G.; Carnevale, V.; DeGrado, W. F. The Flus Proton Escort Science 2010, 330 (6003) 456-458
-
(2010)
Science
, vol.330
, Issue.6003
, pp. 456-458
-
-
Fiorin, G.1
Carnevale, V.2
Degrado, W.F.3
-
50
-
-
68249112089
-
Free-energy Profiles for Ions in the Influenza M2-TMD Channel
-
Mustafa, M.; Henderson, D. J.; Busath, D. D. Free-energy Profiles for Ions in the Influenza M2-TMD Channel Proteins 2009, 76 (4) 794-807
-
(2009)
Proteins
, vol.76
, Issue.4
, pp. 794-807
-
-
Mustafa, M.1
Henderson, D.J.2
Busath, D.D.3
-
51
-
-
84885674437
-
Proton Affinity of the Histidine-tryptophan Cluster Motif from the Influenza A Virus from ab initio Molecular Dynamics
-
Bankura, A.; Klein, M. L.; Carnevale, V. Proton Affinity of the Histidine-tryptophan Cluster Motif from the Influenza A Virus from ab initio Molecular Dynamics Chem. Phys. 2013, 422, 156-164
-
(2013)
Chem. Phys.
, vol.422
, pp. 156-164
-
-
Bankura, A.1
Klein, M.L.2
Carnevale, V.3
-
52
-
-
0032478818
-
The Structure of the Potassium Channel: Molecular basis of K+ Conduction and Selectivity
-
Doyle, D. A.; Cabral, J. M.; Pfuetzner, R. A.; Kuo, A. L.; Gulbis, J. M.; Cohen, S. L.; Chait, B. T.; MacKinnon, R. The Structure of the Potassium Channel: Molecular basis of K+ Conduction and Selectivity Science 1998, 280 (5360) 69-77
-
(1998)
Science
, vol.280
, Issue.5360
, pp. 69-77
-
-
Doyle, D.A.1
Cabral, J.M.2
Pfuetzner, R.A.3
Kuo, A.L.4
Gulbis, J.M.5
Cohen, S.L.6
Chait, B.T.7
Mackinnon, R.8
-
53
-
-
0033516590
-
The Cavity and Pore Helices the KcsA K+ Channel: Electrostatic Stabilization of Monovalent Cations
-
Roux, B.; MacKinnon, R. The Cavity and Pore Helices the KcsA K+ Channel: Electrostatic Stabilization of Monovalent Cations Science 1999, 285 (5424) 100-102
-
(1999)
Science
, vol.285
, Issue.5424
, pp. 100-102
-
-
Roux, B.1
Mackinnon, R.2
-
54
-
-
0345735309
-
Shape Signatures: A new Approach to Computer-aided Ligand- and Receptor-based Drug Design
-
Zauhar, R. J.; Moyna, G.; Tian, L. F.; Li, Z. J.; Welsh, W. J. Shape Signatures: A new Approach to Computer-aided Ligand- and Receptor-based Drug Design J. Med. Chem. 2003, 46 (26) 5674-5690
-
(2003)
J. Med. Chem.
, vol.46
, Issue.26
, pp. 5674-5690
-
-
Zauhar, R.J.1
Moyna, G.2
Tian, L.F.3
Li, Z.J.4
Welsh, W.J.5
-
55
-
-
14944348527
-
A Shape-based 3-D Scaffold hopping Method and its Application to a Bacterial Protein-protein Interaction
-
Rush, T. S.; Grant, J. A.; Mosyak, L.; Nicholls, A. A Shape-based 3-D Scaffold hopping Method and its Application to a Bacterial Protein-protein Interaction J. Med. Chem. 2005, 48 (5) 1489-1495
-
(2005)
J. Med. Chem.
, vol.48
, Issue.5
, pp. 1489-1495
-
-
Rush, T.S.1
Grant, J.A.2
Mosyak, L.3
Nicholls, A.4
-
56
-
-
84891875006
-
Fragment-based Shape Signatures: A new Tool for Virtual Screening and Drug Discovery
-
Zauhar, R. J.; Gianti, E.; Welsh, W. J. Fragment-based Shape Signatures: a new Tool for Virtual Screening and Drug Discovery J. Comput.-Aided Mol. Des. 2013, 27 (12) 1009-1036
-
(2013)
J. Comput.-Aided Mol. Des.
, vol.27
, Issue.12
, pp. 1009-1036
-
-
Zauhar, R.J.1
Gianti, E.2
Welsh, W.J.3
-
57
-
-
33845868822
-
PHASE: A new Engine for Pharmacophore Perception, 3D QSAR Model Development, and 3D Database Screening: 1. Methodology and Preliminary Results
-
Dixon, S. L.; Smondyrev, A. M.; Knoll, E. H.; Rao, S. N.; Shaw, D. E.; Friesner, R. A. PHASE: a new Engine for Pharmacophore Perception, 3D QSAR Model Development, and 3D Database Screening: 1. Methodology and Preliminary Results J. Comput.-Aided Mol. Des. 2006, 20 (10-11) 647-671
-
(2006)
J. Comput.-Aided Mol. Des.
, vol.20
, Issue.1011
, pp. 647-671
-
-
Dixon, S.L.1
Smondyrev, A.M.2
Knoll, E.H.3
Rao, S.N.4
Shaw, D.E.5
Friesner, R.A.6
-
58
-
-
61449104961
-
Fragment-based Identification of Druggable hot spotsof Proteins using Fourier Domain Correlation Techniques
-
Brenke, R.; Kozakov, D.; Chuang, G. Y.; Beglov, D.; Hall, D.; Landon, M. R.; Mattos, C.; Vajda, S. Fragment-based Identification of Druggable hot spotsof Proteins using Fourier Domain Correlation Techniques Bioinformatics 2009, 25 (5) 621-627
-
(2009)
Bioinformatics
, vol.25
, Issue.5
, pp. 621-627
-
-
Brenke, R.1
Kozakov, D.2
Chuang, G.Y.3
Beglov, D.4
Hall, D.5
Landon, M.R.6
Mattos, C.7
Vajda, S.8
-
59
-
-
33846524439
-
Motifs for Molecular Recognition Exploiting Hydrophobic Enclosure in Protein-ligand Binding
-
Young, T.; Abel, R.; Kim, B.; Berne, B. J.; Friesner, R. A. Motifs for Molecular Recognition Exploiting Hydrophobic Enclosure in Protein-ligand Binding Proc. Natl. Acad. Sci. U.S.A. 2007, 104 (3) 808-813
-
(2007)
Proc. Natl. Acad. Sci. U.S.A.
, vol.104
, Issue.3
, pp. 808-813
-
-
Young, T.1
Abel, R.2
Kim, B.3
Berne, B.J.4
Friesner, R.A.5
-
60
-
-
84857748866
-
Rapid and Accurate Prediction and Scoring of Water Molecules in Protein Binding Sites
-
Ross, G. A.; Morris, G. M.; Biggin, P. C., Rapid and Accurate Prediction and Scoring of Water Molecules in Protein Binding Sites. PLoS One 2012, 7 (3).
-
(2012)
PLoS One
, vol.7
, Issue.3
-
-
Ross, G.A.1
Morris, G.M.2
Biggin, P.C.3
-
61
-
-
70350315092
-
Energetics of Displacing Water Molecules from Protein Binding Sites: Consequences for Ligand Optimization
-
Michel, J.; Tirado-Rives, J.; Jorgensen, W. L. Energetics of Displacing Water Molecules from Protein Binding Sites: Consequences for Ligand Optimization J. Am. Chem. Soc. 2009, 131 (42) 15403-15411
-
(2009)
J. Am. Chem. Soc.
, vol.131
, Issue.42
, pp. 15403-15411
-
-
Michel, J.1
Tirado-Rives, J.2
Jorgensen, W.L.3
|