-
1
-
-
84858079538
-
Disentangling ribbon worm relationships: Multi-locus analysis supports traditional classification of the phylum Nemertea
-
Andrade SCS, Strand M, Schwartz M, Chen H-X, Kajihara H, vonDöhren J, Sun S-C, Junoy J, Thiel M, Norenburg JL, et al. 2012. Disentangling ribbon worm relationships: multi-locus analysis supports traditional classification of the phylum Nemertea. Cladistics 28: 141-159.
-
Cladistics
, vol.28
, pp. 141-159
-
-
Andrade, S.C.S.1
Strand, M.2
Schwartz, M.3
Chen, H.-X.4
Kajihara, H.5
Von Döhren, J.6
Sun, S.-C.7
Junoy, J.8
Thiel, M.9
Norenburg, J.L.10
-
2
-
-
84894596325
-
Conserved genes, sampling error, and phylogenomic inference
-
Betancur-R. R, Naylor G, Ortí G. 2014. Conserved genes, sampling error, and phylogenomic inference. Syst Biol. 63:257-262.
-
(2014)
Syst Biol.
, vol.63
, pp. 257-262
-
-
Betancur, R.R.1
Naylor, G.2
Ortí, G.3
-
3
-
-
67849135832
-
-
Bleidorn C, Podsiadlowski L, Zhong M, Eeckhaut I, Hartmann S, Halanych KM, Tiedemann R. 2009. On the phylogenetic position of Myzostomida: can 77 genes get it wrong? BMC Evol Biol. 9:150.
-
(2009)
On the Phylogenetic Position of Myzostomida: Can 77 Genes Get It Wrong? BMC Evol Biol.
, vol.9
, pp. 150
-
-
Bleidorn, C.1
Podsiadlowski, L.2
Zhong, M.3
Eeckhaut, I.4
Hartmann, S.5
Halanych, K.M.6
Tiedemann, R.7
-
4
-
-
67650757433
-
TrimAl: A tool for automated alignment trimming in large-scale phylogenetic analyses
-
Capella-Gutiérrez S, Silla-Martínez JM, Gabaldón T. 2009. trimAl: a tool for automated alignment trimming in large-scale phylogenetic analyses. Bioinformatics 25:1972-1973.
-
(2009)
Bioinformatics
, vol.25
, pp. 1972-1973
-
-
Capella-Gutiérrez, S.1
Silla-Martínez, J.M.2
Gabaldón, T.3
-
5
-
-
84859752085
-
A comparative study of nemertean complete mitochondrial genomes, including two new ones for Nectonemertes cf. Mirabilis and Zygeupolia rubens, may elucidate the fundamental pattern for the phylum Nemertea
-
Chen H-X, Sun S-C, Sundberg P, Ren W-C, Norenburg JL. 2012. A comparative study of nemertean complete mitochondrial genomes, including two new ones for Nectonemertes cf. mirabilis and Zygeupolia rubens, may elucidate the fundamental pattern for the phylum Nemertea. BMC Genomics 13:139.
-
(2012)
BMC Genomics
, vol.13
, pp. 139
-
-
Chen, H.-X.1
Sun, S.-C.2
Sundberg, P.3
Ren, W.-C.4
Norenburg, J.L.5
-
6
-
-
84887411307
-
Morphology of the proboscis of Hubrechtella juliae (Nemertea, Pilidiophora): Implications for pilidiophoran monophyly
-
Chernyshev AV, Magarlamov TY, Turbeville JM. 2013. Morphology of the proboscis of Hubrechtella juliae (Nemertea, Pilidiophora): implications for pilidiophoran monophyly. J Morphol. 274: 1397-1414.
-
(2013)
J Morphol.
, vol.274
, pp. 1397-1414
-
-
Chernyshev, A.V.1
Magarlamov, T.Y.2
Turbeville, J.M.3
-
7
-
-
79954529507
-
ProtTest 3: Fast selection of best-fit models of protein evolution
-
Darriba D, Taboada GL, Doallo R, Posada D. 2011. ProtTest 3: fast selection of best-fit models of protein evolution. Bioinformatics 27: 1164-1165.
-
(2011)
Bioinformatics
, vol.27
, pp. 1164-1165
-
-
Darriba, D.1
Taboada, G.L.2
Doallo, R.3
Posada, D.4
-
8
-
-
33646928341
-
Discordance of species trees with their most likely gene trees
-
Degnan JH, Rosenberg NA. 2006. Discordance of species trees with their most likely gene trees. PLoS Genet. 2:e68.
-
(2006)
PLoS Genet.
, vol.2
, pp. e68
-
-
Degnan, J.H.1
Rosenberg, N.A.2
-
9
-
-
17744394753
-
Phylogenomics and the reconstruction of the tree of life
-
Delsuc F, Brinkmann H, Philippe H. 2005. Phylogenomics and the reconstruction of the tree of life. Nat Rev Genet. 6:361-375.
-
(2005)
Nat Rev Genet.
, vol.6
, pp. 361-375
-
-
Delsuc, F.1
Brinkmann, H.2
Philippe, H.3
-
10
-
-
42149157760
-
Broad phylogenomic sampling improves resolution of the animal tree of life
-
Dunn CW, Hejnol A, Matus DQ, Pang K, Browne WE, Smith SA, Seaver E, Rouse GW, Obst M, Edgecombe GD, et al. 2008. Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452:745-749.
-
(2008)
Nature
, vol.452
, pp. 745-749
-
-
Dunn, C.W.1
Hejnol, A.2
Matus, D.Q.3
Pang, K.4
Browne, W.E.5
Smith, S.A.6
Seaver, E.7
Rouse, G.W.8
Obst, M.9
Edgecombe, G.D.10
-
13
-
-
84901423154
-
Evaluating topological conflict in centipede phylogeny using transcriptomic data sets
-
Fernández R, Laumer CE, Vahtera V, Libro S, Kaluziak S, Sharma PP, Pérez-Porro AR, Edgecombe GD, Giribet G. 2014. Evaluating topological conflict in centipede phylogeny using transcriptomic data sets. Mol Biol Evol. 31:1500-1513.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 1500-1513
-
-
Fernández, R.1
Laumer, C.E.2
Vahtera, V.3
Libro, S.4
Kaluziak, S.5
Sharma, P.P.6
Pérez-Porro, A.R.7
Edgecombe, G.D.8
Giribet, G.9
-
14
-
-
0029527107
-
Nemertean genera and species of the world: An annotated checklist of original names and description citations, synonyms, current taxonomic status, habitats and recorded zoogeographic distribution
-
Gibson R. 1995. Nemertean genera and species of the world: an annotated checklist of original names and description citations, synonyms, current taxonomic status, habitats and recorded zoogeographic distribution. J Nat Hist. 29:271-562.
-
(1995)
J Nat Hist.
, vol.29
, pp. 271-562
-
-
Gibson, R.1
-
15
-
-
84876552254
-
SuperQ: Computing supernetworks from quartets
-
Grünewald S, Spillner A, Bastkowski S, Bogershausen A, Moulton V. 2013. SuperQ: computing supernetworks from quartets. IEEE/ACM Trans Comput Biol Bioinform. 10:151-160.
-
(2013)
IEEE/ACM Trans Comput Biol Bioinform.
, Issue.10
, pp. 151-160
-
-
Grünewald, S.1
Spillner, A.2
Bastkowski, S.3
Bogershausen, A.4
Moulton, V.5
-
16
-
-
84856025326
-
Exploiting gene families for phylogenomic analysis of myzostomid transcriptome data
-
Hartmann S, Helm C, Nickel B, Meyer M, Struck TH, Tiedemann R, Selbig J, Bleidorn C. 2012. Exploiting gene families for phylogenomic analysis of myzostomid transcriptome data. PLoS One 7:e29843.
-
(2012)
PLoS One
, vol.7
, pp. e29843
-
-
Hartmann, S.1
Helm, C.2
Nickel, B.3
Meyer, M.4
Struck, T.H.5
Tiedemann, R.6
Selbig, J.7
Bleidorn, C.8
-
17
-
-
72749099971
-
Assessing the root of bilaterian animals with scalable phylogenomicmethods
-
Hejnol A, Obst M, Stamatakis A, Ott M, Rouse GW, Edgecombe GD, Martinez P, Baguñá J, Bailly X, Jondelius U, et al. 2009. Assessing the root of bilaterian animals with scalable phylogenomicmethods. Proc R Soc B Biol Sci. 276:4261-4270.
-
(2009)
Proc R Soc B Biol Sci.
, vol.276
, pp. 4261-4270
-
-
Hejnol, A.1
Obst, M.2
Stamatakis, A.3
Ott, M.4
Rouse, G.W.5
Edgecombe, G.D.6
Martinez, P.7
Baguñá, J.8
Bailly, X.9
Jondelius, U.10
-
18
-
-
77249086587
-
Bayesian inference of species trees from multilocus data
-
Heled J, Drummond AJ. 2010. Bayesian inference of species trees from multilocus data. Mol Biol Evol. 27:570-580.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 570-580
-
-
Heled, J.1
Drummond, A.J.2
-
19
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D. 2006. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol. 23:254-267.
-
(2006)
Mol Biol Evol.
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
21
-
-
67349269824
-
Checklist of nemertean genera and species published between 1995-2007
-
Kajihara H, Chernyshev AV, Sun S-C, Sundberg P, Crandall FB. 2008. Checklist of nemertean genera and species published between 1995-2007. Species Div. 13:245-274.
-
(2008)
Species Div.
, vol.13
, pp. 245-274
-
-
Kajihara, H.1
Chernyshev, A.V.2
Sun, S.-C.3
Sundberg, P.4
Crandall, F.B.5
-
22
-
-
13744252890
-
MAFFT version 5: Improvement in accuracy of multiple sequence alignment
-
Katoh K, Kuma K, Toh H, Miyata T. 2005. MAFFT version 5: improvement in accuracy of multiple sequence alignment. Nucleic Acids Res. 33:511-518.
-
(2005)
Nucleic Acids Res.
, vol.33
, pp. 511-518
-
-
Katoh, K.1
Kuma, K.2
Toh, H.3
Miyata, T.4
-
23
-
-
45949107473
-
Recent developments in the MAFFT multiple sequence alignment program
-
Katoh K, Toh H. 2008. Recent developments in the MAFFT multiple sequence alignment program. Brief Bioinform. 9:286-298.
-
(2008)
Brief Bioinform.
, vol.9
, pp. 286-298
-
-
Katoh, K.1
Toh, H.2
-
24
-
-
80053132393
-
Phylogenomics reveals deep molluscan relationships
-
Kocot KM, Cannon JT, Todt C, Citarella MR, Kohn AB, Meyer A, Santos SR, Schander C, Moroz LM, Lieb B, et al. 2011. Phylogenomics reveals deep molluscan relationships. Nature 477:452-456.
-
(2011)
Nature
, vol.477
, pp. 452-456
-
-
Kocot, K.M.1
Cannon, J.T.2
Todt, C.3
Citarella, M.R.4
Kohn, A.B.5
Meyer, A.6
Santos, S.R.7
Schander, C.8
Moroz, L.M.9
Lieb, B.10
-
25
-
-
84903637222
-
New insights into the phylogeny, systematics and DNA barcoding of Nemertea
-
Kvist S, Laumer CE, Junoy J, Giribet G. 2014. New insights into the phylogeny, systematics and DNA barcoding of Nemertea. Invertebr Syst. 28:287-308.
-
(2014)
Invertebr Syst.
, vol.28
, pp. 287-308
-
-
Kvist, S.1
Laumer, C.E.2
Junoy, J.3
Giribet, G.4
-
26
-
-
40549115956
-
Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
-
Lartillot N, Philippe H. 2008. Improvement of molecular phylogenetic inference and the phylogeny of Bilateria. Philos Trans R Soc Lond B Biol Sci. 363:1463-1472.
-
(2008)
Philos Trans R Soc Lond B Biol Sci.
, vol.363
, pp. 1463-1472
-
-
Lartillot, N.1
Philippe, H.2
-
27
-
-
84866924443
-
Modeling protein evolution with several amino acid replacement matrices depending on site rates
-
Le SQ, Dang CC, Gascuel O. 2012. Modeling protein evolution with several amino acid replacement matrices depending on site rates. Mol Biol Evol. 29:2921-2936.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 2921-2936
-
-
Le Dang, S.Q.C.C.1
Gascuel, O.2
-
28
-
-
80051792622
-
Let them fall where they may: Congruence analysis in massive phylogenetically messy data sets
-
Leigh JW, Schliep K, Lopez P, Bapteste E. 2011. Let them fall where they may: congruence analysis in massive phylogenetically messy data sets. Mol Biol Evol. 28:2773-2785.
-
(2011)
Mol Biol Evol.
, vol.28
, pp. 2773-2785
-
-
Leigh, J.W.1
Schliep, K.2
Lopez, P.3
Bapteste, E.4
-
29
-
-
0141519279
-
OrthoMCL: Identification of ortholog groups for eukaryotic genomes
-
Li L, Stoeckert CJ, Roos DS. 2003. OrthoMCL: identification of ortholog groups for eukaryotic genomes. Genome Res. 13:2178-2189.
-
(2003)
Genome Res.
, vol.13
, pp. 2178-2189
-
-
Li, L.1
Stoeckert, C.J.2
Roos, D.S.3
-
30
-
-
47749093183
-
Estimating species trees using multiple-allele DNA sequence data
-
Liu L, Pearl DK, Brumfield RT, Edwards SV. 2008. Estimating species trees using multiple-allele DNA sequence data. Evolution 62:2080-2091.
-
(2008)
Evolution
, vol.62
, pp. 2080-2091
-
-
Liu, L.1
Pearl, D.K.2
Brumfield, R.T.3
Edwards, S.V.4
-
31
-
-
70349425459
-
Estimating species phylogenies using coalescence times among sequences
-
Liu L, Yu LL, Pearl DK, Edwards SV. 2009. Estimating species phylogenies using coalescence times among sequences. Syst Biol. 58:468-477.
-
(2009)
Syst Biol.
, vol.58
, pp. 468-477
-
-
Liu, L.1
Yu, L.L.2
Pearl, D.K.3
Edwards, S.V.4
-
32
-
-
78649571941
-
Development to metamorphosis of the nemertean pilidium larva
-
Maslakova SA. 2010a. Development to metamorphosis of the nemertean pilidium larva. Front Zool. 7:30.
-
(2010)
Front Zool.
, vol.7
, pp. 30
-
-
Maslakova, S.A.1
-
33
-
-
78650835592
-
The invention of the pilidium larva in an otherwise perfectly good spiralian phylum Nemertea
-
Maslakova SA. 2010b. The invention of the pilidium larva in an otherwise perfectly good spiralian phylum Nemertea. Int Comp Biol. 50: 734-743.
-
(2010)
Int Comp Biol.
, vol.50
, pp. 734-743
-
-
Maslakova, S.A.1
-
34
-
-
78650931246
-
Calibrating divergence times on species trees versus gene trees: Implications for speciation history of Aphelocoma jays
-
McCormack JE, Heled J, Delaney KS, Peterson AT, Knowles LL. 2011. Calibrating divergence times on species trees versus gene trees: implications for speciation history of Aphelocoma jays. Evolution 65: 184-202.
-
(2011)
Evolution
, vol.65
, pp. 184-202
-
-
McCormack, J.E.1
Heled, J.2
Delaney, K.S.3
Peterson, A.T.4
Knowles, L.L.5
-
36
-
-
77958144939
-
A phylogenomic approach to resolve the arthropod tree of life
-
Meusemann K, von Reumont BM, Simon S, Roeding F, Strauss S, Kück P, Ebersberger I,Walzl M, Pass G, Breuers S, et al. 2010. A phylogenomic approach to resolve the arthropod tree of life. Mol Biol Evol. 27: 2451-2464.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 2451-2464
-
-
Meusemann, K.1
Von Reumont, B.M.2
Simon, S.3
Roeding, F.4
Strauss, S.5
Kück, P.6
Ebersberger, I.7
Walzl, M.8
Pass, G.9
Breuers, S.10
-
37
-
-
84875056107
-
Deep metazoan phylogeny: When different genes tell different stories
-
Nosenko T, Schreiber F, Adamska M, Adamski M, Eitel M, Hammel J, Maldonado M, Müller WEG, Nickel M, Schierwater B, et al. 2013. Deep metazoan phylogeny: when different genes tell different stories. Mol Phylogenet Evol. 67:223-233.
-
(2013)
Mol Phylogenet Evol.
, vol.67
, pp. 223-233
-
-
Nosenko, T.1
Schreiber, F.2
Adamska, M.3
Adamski, M.4
Eitel, M.5
Hammel, J.6
Maldonado, M.7
Weg, M.8
Nickel, M.9
Schierwater, B.10
-
38
-
-
79953716259
-
Resolving difficult phylogenetic questions: Why more sequences are not enough
-
Philippe H, Brinkmann H, Lavrov DV, Littlewood DTJ, Manuel M, Wörheide G, Baurain D. 2011. Resolving difficult phylogenetic questions: why more sequences are not enough. PLoS Biol. 9: e1000602.
-
(2011)
PLoS Biol.
, vol.9
, pp. e1000602
-
-
Philippe, H.1
Brinkmann, H.2
Lavrov, D.V.3
Dtj, L.4
Manuel, M.5
Wörheide, G.6
Baurain, D.7
-
39
-
-
77955497041
-
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships
-
Pick KS, Philippe H, Schreiber F, Erpenbeck D, Jackson DJ, Wrede P, Wiens M, Alie A, Morgenstern B, Manuel M, et al. 2010. Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships. Mol Biol Evol. 27:1983-1987.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 1983-1987
-
-
Pick, K.S.1
Philippe, H.2
Schreiber, F.3
Erpenbeck, D.4
Jackson, D.J.5
Wrede, P.6
Wiens, M.7
Alie, A.8
Morgenstern, B.9
Manuel, M.10
-
40
-
-
80055121128
-
Dating the arthropod tree based on large-scale transcriptome data
-
Rehm P, Borner J, Meusemann K, von Reumont BM, Simon S, Hadrys H, Misof B, Burmester T. 2011. Dating the arthropod tree based on large-scale transcriptome data. Mol Phylogenet Evol. 61:880-887.
-
(2011)
Mol Phylogenet Evol.
, vol.61
, pp. 880-887
-
-
Rehm, P.1
Borner, J.2
Meusemann, K.3
Von Reumont, B.M.4
Simon, S.5
Hadrys, H.6
Misof, B.7
Burmester, T.8
-
41
-
-
84870060244
-
Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa
-
Riesgo A, Andrade SC, Sharma PP, Novo M, Pérez-Porro AR, Vahtera V, González VL, Kawauchi GY, Giribet G. 2012. Comparative description of ten transcriptomes of newly sequenced invertebrates and efficiency estimation of genomic sampling in non-model taxa. Front Zool. 9:33.
-
(2012)
Front Zool.
, vol.9
, pp. 33
-
-
Riesgo, A.1
Andrade, S.C.2
Sharma, P.P.3
Novo, M.4
Pérez-Porro, A.R.5
Vahtera, V.6
González, V.L.7
Kawauchi, G.Y.8
Giribet, G.9
-
42
-
-
84856735827
-
Optimization of preservation and storage time of sponge tissues to obtain quality mRNA for next-generation sequencing
-
Riesgo A, Pérez-Porro AR, Carmona S, Leys SP, Giribet G. 2012. Optimization of preservation and storage time of sponge tissues to obtain quality mRNA for next-generation sequencing. Mol Ecol Resour. 12:312-322.
-
(2012)
Mol Ecol Resour.
, vol.12
, pp. 312-322
-
-
Riesgo, A.1
Pérez-Porro, A.R.2
Carmona, S.3
Leys, S.P.4
Giribet, G.5
-
43
-
-
84860109324
-
MrBayes 3.2: Efficient Bayesian phylogenetic inference and model choice across a large model space
-
Ronquist F, Teslenko M, van der Mark P, Ayres DL, Darling A, Höhna S, Larget B, Liu L, Suchard MA, Huelsenbeck JP. 2012. MrBayes 3.2: efficient Bayesian phylogenetic inference and model choice across a large model space. Syst Biol. 61:539-542.
-
(2012)
Syst Biol.
, vol.61
, pp. 539-542
-
-
Ronquist, F.1
Teslenko, M.2
Van Der Mark, P.3
Ayres, D.L.4
Darling, A.5
Höhna, S.6
Larget, B.7
Liu, L.8
Suchard, M.A.9
Huelsenbeck, J.P.10
-
44
-
-
84871842306
-
Impact of missing data on phylogenies inferred from empirical phylogenomic data sets
-
Roure B, Baurain D, Philippe H. 2013. Impact of missing data on phylogenies inferred from empirical phylogenomic data sets. Mol Biol Evol. 30:197-214.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 197-214
-
-
Roure, B.1
Baurain, D.2
Philippe, H.3
-
45
-
-
79954579960
-
Evaluating ortholog prediction algorithms in a yeast model clade
-
Salichos L, Rokas A. 2011. Evaluating ortholog prediction algorithms in a yeast model clade. PLoS One 6:e18755.
-
(2011)
PLoS One
, vol.6
, pp. e18755
-
-
Salichos, L.1
Rokas, A.2
-
46
-
-
84878113118
-
Inferring ancient divergences requires genes with strong phylogenetic signals
-
Salichos L, Rokas A. 2013. Inferring ancient divergences requires genes with strong phylogenetic signals. Nature 497:327-331.
-
(2013)
Nature
, vol.497
, pp. 327-331
-
-
Salichos, L.1
Rokas, A.2
-
47
-
-
84898641369
-
Novel information theory-based measures for quantifying incongruence among phylogenetic trees
-
Salichos L, Stamatakis A, Rokas A. 2014. Novel information theory-based measures for quantifying incongruence among phylogenetic trees. Mol Biol Evol. 31:1261-1271.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 1261-1271
-
-
Salichos, L.1
Stamatakis, A.2
Rokas, A.3
-
48
-
-
80053148534
-
Inferring species trees from gene trees in a radiation of California trapdoor spiders (Araneae, Antrodiaetidae, Aliatypus)
-
Satler JD, Starrett J, Hayashi CY, Hedin M. 2011. Inferring species trees from gene trees in a radiation of California trapdoor spiders (Araneae, Antrodiaetidae, Aliatypus). PLoS One 6:e25355.
-
(2011)
PLoS One
, vol.6
, pp. e25355
-
-
Satler, J.D.1
Starrett, J.2
Hayashi, C.Y.3
Hedin, M.4
-
50
-
-
84859768479
-
Oases: Robust de novo RNA-seq assembly across the dynamic range of expression levels
-
Schulz MH, Zerbino DR, Vingron M, Birney E. 2012. Oases: robust de novo RNA-seq assembly across the dynamic range of expression levels. Bioinformatics 28:1086-1092.
-
(2012)
Bioinformatics
, vol.28
, pp. 1086-1092
-
-
Schulz, M.H.1
Zerbino, D.R.2
Vingron, M.3
Birney, E.4
-
51
-
-
84910635621
-
Phylogenomic interrogation of Chelicerata reveals systemic conflicts in phylogenetic signal
-
Sharma PP, Kaluziak S, Pérez-Porro AR, González VL, Hormiga G, Wheeler WC, Giribet G. 2014. Phylogenomic interrogation of Chelicerata reveals systemic conflicts in phylogenetic signal. Mol Biol Evol. 31:2963-2984.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 2963-2984
-
-
Sharma, P.P.1
Kaluziak, S.2
Pérez-Porro, A.R.3
González, V.L.4
Hormiga, G.5
Wheeler, W.C.6
Giribet, G.7
-
52
-
-
83555166100
-
Resolving the evolutionary relationships of molluscs with phylogenomic tools
-
Smith S, Wilson NG, Goetz F, Feehery C, Andrade SCS, Rouse GW, Giribet G, Dunn CW. 2011. Resolving the evolutionary relationships of molluscs with phylogenomic tools. Nature 480:364-367.
-
(2011)
Nature
, vol.480
, pp. 364-367
-
-
Smith, S.1
Wilson, N.G.2
Goetz, F.3
Feehery, C.4
Scs, A.5
Rouse, G.W.6
Giribet, G.7
Dunn, C.W.8
-
53
-
-
33750403801
-
RAxML-VI-HPC: Maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models
-
Stamatakis A. 2006. RAxML-VI-HPC: maximum likelihood-based phylogenetic analyses with thousands of taxa and mixed models. Bioinformatics 22:2688-2690.
-
(2006)
Bioinformatics
, vol.22
, pp. 2688-2690
-
-
Stamatakis, A.1
-
54
-
-
0002585075
-
Die Polystilifera der Siboga-Expedition
-
Stiasny-Wijnhoff G. 1936. Die Polystilifera der Siboga-Expedition. Siboga Exped. 22:1-214.
-
(1936)
Siboga Exped.
, vol.22
, pp. 1-214
-
-
Stiasny-Wijnhoff, G.1
-
55
-
-
79952254741
-
Phylogenomic analyses unravel annelid evolution
-
Struck TH, Paul C, Hill N, Hartmann S, Hösel C, Kube M, Lieb B, Meyer A, Tiedemann R, Purschke G, et al. 2011. Phylogenomic analyses unravel annelid evolution. Nature 471:95-98.
-
(2011)
Nature
, vol.471
, pp. 95-98
-
-
Struck, T.H.1
Paul, C.2
Hill, N.3
Hartmann, S.4
Hösel, C.5
Kube, M.6
Lieb, B.7
Meyer, A.8
Tiedemann, R.9
Purschke, G.10
-
56
-
-
84903701024
-
Platyzoan paraphyly based on phylogenomic data supports a non-coelomate ancestry of Spiralia
-
Struck TH, Wey-Fabrizius AR, Golombek A, Hering L, Weigert A, Bleidorn C, Klebow S, Iakovenko N, Hausdorf B, Petersen M, et al. 2014. Platyzoan paraphyly based on phylogenomic data supports a non-coelomate ancestry of Spiralia. Mol Biol Evol. 31:1833-1849.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 1833-1849
-
-
Struck, T.H.1
Wey-Fabrizius, A.R.2
Golombek, A.3
Hering, L.4
Weigert, A.5
Bleidorn, C.6
Klebow, S.7
Iakovenko, N.8
Hausdorf, B.9
Petersen, M.10
-
57
-
-
35549004491
-
Annulonemertes (phylum Nemertea): When segments do not count
-
Sundberg P, Strand M. 2007. Annulonemertes (phylum Nemertea): when segments do not count. Biol Lett. 3:570-573.
-
(2007)
Biol Lett.
, vol.3
, pp. 570-573
-
-
Sundberg, P.1
Strand, M.2
-
58
-
-
0034854012
-
Phylogenetic relationships among higher nemertean (Nemertea) taxa inferred from 18S rDNA sequences
-
Sundberg P, Turbeville JM, Lindh S. 2001. Phylogenetic relationships among higher nemertean (Nemertea) taxa inferred from 18S rDNA sequences. Mol Phylogenet Evol. 20:327-334.
-
(2001)
Mol Phylogenet Evol.
, vol.20
, pp. 327-334
-
-
Sundberg, P.1
Turbeville, J.M.2
Lindh, S.3
-
59
-
-
0037460766
-
Ribbon worm relationships: A phylogeny of the phylum Nemertea
-
Thollesson M, Norenburg JL. 2003. Ribbon worm relationships: a phylogeny of the phylum Nemertea. Proc R Soc B Biol Sci. 270: 407-415.
-
(2003)
Proc R Soc B Biol Sci.
, vol.270
, pp. 407-415
-
-
Thollesson, M.1
Norenburg, J.L.2
-
60
-
-
0036625772
-
Progress in nemertean biology: Development and phylogeny
-
Turbeville JM. 2002. Progress in nemertean biology: development and phylogeny. Integr Comp Biol. 42:692-703.
-
(2002)
Integr Comp Biol.
, vol.42
, pp. 692-703
-
-
Turbeville, J.M.1
-
61
-
-
84857215053
-
Pancrustacean phylogeny in the light of new phylogenomic data: Support for Remipedia as the possible sister group of Hexapoda
-
von Reumont BM, Jenner RA, Wills MA, Dell'Ampio E, Pass G, Ebersberger I, Meyer B, Koenemann S, Iliffe TM, Stamatakis A, et al. 2012. Pancrustacean phylogeny in the light of new phylogenomic data: support for Remipedia as the possible sister group of Hexapoda. Mol Biol Evol. 29:1031-1045.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 1031-1045
-
-
Von Reumont, B.M.1
Jenner, R.A.2
Wills, M.A.3
Dell'Ampio, E.4
Pass, G.5
Ebersberger, I.6
Meyer, B.7
Koenemann, S.8
Iliffe, T.M.9
Stamatakis, A.10
-
62
-
-
13244256972
-
Prot4EST: Translating expressed sequence tags from neglected genomes
-
Wasmuth JD, Blaxter ML. 2004. prot4EST: translating expressed sequence tags from neglected genomes. BMC Bioinformatics 5:187.
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 187
-
-
Wasmuth, J.D.1
Blaxter, M.L.2
-
64
-
-
43149115851
-
Velvet: Algorithms for de novo short read assembly using de Bruijn graphs
-
Zerbino DR, Birney E. 2008. Velvet: algorithms for de novo short read assembly using de Bruijn graphs. Genome Res. 18:821-829.
-
(2008)
Genome Res.
, vol.18
, pp. 821-829
-
-
Zerbino, D.R.1
Birney, E.2
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