-
1
-
-
84872287798
-
Inferring hierarchical orthologous groups from orthologous gene pairs
-
Altenhoff AM, Gil M, Gonnet GH, Dessimoz C. 2013. Inferring hierarchical orthologous groups from orthologous gene pairs. PLoS One 8: e53786.
-
(2013)
PLoS One
, vol.8
-
-
Altenhoff, A.M.1
Gil, M.2
Gonnet, G.H.3
Dessimoz, C.4
-
3
-
-
0038347215
-
An Early Devonian arthropod fauna from the Windyfield Cherts, Aberdeenshire, Scotland
-
Anderson LI, Trewin NH. 2003. An Early Devonian arthropod fauna from the Windyfield Cherts, Aberdeenshire, Scotland. Palaeontology 46: 457-509.
-
(2003)
Palaeontology
, vol.46
, pp. 457-509
-
-
Anderson, L.I.1
Trewin, N.H.2
-
4
-
-
0003525785
-
Multicellular animals
-
Berlin (Germany): Springer
-
Ax P. 2000. Multicellular animals, Volume II. The phylogenetic system of the Metazoa. Berlin (Germany): Springer.
-
(2000)
The Phylogenetic System of the Metazoa
, vol.2
-
-
Ax, P.1
-
5
-
-
79955456912
-
Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood
-
Berger SA, Krompass D, Stamatakis A. 2011. Performance, accuracy, and Web server for evolutionary placement of short sequence reads under maximum likelihood. Syst Biol. 60:291-302.
-
(2011)
Syst Biol.
, vol.60
, pp. 291-302
-
-
Berger, S.A.1
Krompass, D.2
Stamatakis, A.3
-
6
-
-
84894596325
-
Conserved genes, sampling error, and phylogenomic inference
-
Betancur R R, Naylor G, Ortí G. 2014. Conserved genes, sampling error, and phylogenomic inference. Syst Biol. 63:257-262.
-
(2014)
Syst Biol.
, vol.63
, pp. 257-262
-
-
Betancur, R.R.1
Naylor, G.2
Ortí, G.3
-
7
-
-
67849135832
-
On the phylogenetic position of Myzostomida: Can 77 genes get it wrong?
-
Bleidorn C, Podsiadlowski L, Zhong M, Eeckhaut I, Hartmann S, Halanych KM, Tiedemann R. 2009. On the phylogenetic position of Myzostomida: can 77 genes get it wrong? BMC Evol Biol. 9:150.
-
(2009)
BMC Evol Biol.
, vol.9
, pp. 150
-
-
Bleidorn, C.1
Podsiadlowski, L.2
Zhong, M.3
Eeckhaut, I.4
Hartmann, S.5
Halanych, K.M.6
Tiedemann, R.7
-
8
-
-
0001869963
-
Evolution und phylogenetisches system der Chilopoda (Mandibulata, Tracheata)
-
Borucki H. 1996. Evolution und phylogenetisches system der Chilopoda (Mandibulata, Tracheata). Vehr naturwiss Ver Hamburg. 35:95-226.
-
(1996)
Vehr Naturwiss Ver Hamburg.
, vol.35
, pp. 95-226
-
-
Borucki, H.1
-
9
-
-
84891755492
-
Decisive data sets in phylogenomics: Lessons from studies on the phylogenetic relationships of primarily wingless insects
-
Dell'Ampio E, Meusemann K, Szucsich NU, Peters RS, Meyer B, Borner J, Petersen M, Aberer AJ, Stamatakis A,Walzl MG, et al. 2014. Decisive data sets in phylogenomics: lessons from studies on the phylogenetic relationships of primarily wingless insects. Mol Biol Evol. 31: 239-249.
-
(2014)
Mol Biol Evol.
, vol.31
, pp. 239-249
-
-
Dell'Ampio, E.1
Meusemann, K.2
Szucsich, N.U.3
Peters, R.S.4
Meyer, B.5
Borner, J.6
Petersen, M.7
Aberer, A.J.8
Stamatakis, A.9
Walzl, M.G.10
-
10
-
-
0001846773
-
Phylogenetic pathways in the Chilopoda
-
Dohle W. 1985. Phylogenetic pathways in the Chilopoda. Bijdr Dierkunde. 55:55-66.
-
(1985)
Bijdr Dierkunde.
, vol.55
, pp. 55-66
-
-
Dohle, W.1
-
11
-
-
42149157760
-
Broad phylogenomic sampling improves resolution of the animal tree of life
-
Dunn CW, Hejnol A, Matus DQ, Pang K, Browne WE, Smith SA, Seaver E, Rouse GW, Obst M, Edgecombe GD, et al. 2008. Broad phylogenomic sampling improves resolution of the animal tree of life. Nature 452:745-749.
-
(2008)
Nature
, vol.452
, pp. 745-749
-
-
Dunn, C.W.1
Hejnol, A.2
Matus, D.Q.3
Pang, K.4
Browne, W.E.5
Smith, S.A.6
Seaver, E.7
Rouse, G.W.8
Obst, M.9
Edgecombe, G.D.10
-
12
-
-
3042666256
-
MUSCLE: Multiple sequence alignment with high accuracy and high throughput
-
Edgar RC. 2004. MUSCLE: multiple sequence alignment with high accuracy and high throughput. Nucleic Acids Res. 32:1792-1797.
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 1792-1797
-
-
Edgar, R.C.1
-
13
-
-
84883450679
-
Chilopoda-phylogeny
-
In: Minelli A, editor The Myriapoda Leiden and Boston: Brill
-
Edgecombe GD. 2011a. Chilopoda-phylogeny. In: Minelli A, editor. Treatise on zoology-anatomy, taxonomy, biology. The Myriapoda, Vol. 1. Leiden and Boston: Brill. p. 339-354.
-
(2011)
Treatise on Zoology-anatomy, Taxonomy, Biology
, vol.1
, pp. 339-354
-
-
Edgecombe, G.D.1
-
14
-
-
84864054507
-
Chilopoda - The fossil history
-
In: Minelli A, editor The Myriapoda. Leiden and Boston: Brill
-
Edgecombe GD. 2011b. Chilopoda-the fossil history. In: Minelli A, editor. Treatise on zoology-anatomy, taxonomy, biology. The Myriapoda, Vol. 1. Leiden and Boston: Brill. p. 355-361.
-
(2011)
Treatise on Zoology-anatomy, Taxonomy, Biology
, vol.1
, pp. 355-361
-
-
Edgecombe, G.D.1
-
15
-
-
2442592690
-
Adding mitochondrial sequence data (16S rRNA and cytochrome c oxidase subunit I) to the phylogeny of centipedes (Myriapoda, Chilopoda): An analysis of morphology and four molecular loci
-
Edgecombe GD, Giribet G. 2004. Adding mitochondrial sequence data (16S rRNA and cytochrome c oxidase subunit I) to the phylogeny of centipedes (Myriapoda, Chilopoda): an analysis of morphology and four molecular loci. J Zool Syst Evol Res. 42:89-134.
-
(2004)
J Zool Syst Evol Res.
, vol.42
, pp. 89-134
-
-
Edgecombe, G.D.1
Giribet, G.2
-
16
-
-
33846376591
-
Evolutionary biology of centipedes (Myriapoda: Chilopoda)
-
Edgecombe GD, Giribet G. 2007. Evolutionary biology of centipedes (Myriapoda: Chilopoda). Annu Rev Entomol. 52:151-170.
-
(2007)
Annu Rev Entomol.
, vol.52
, pp. 151-170
-
-
Edgecombe, G.D.1
Giribet, G.2
-
17
-
-
40949148219
-
A New Zealand species of the trans-Tasman centipede order Craterostigmomorpha (Arthropoda:Chilopoda) corroborated by molecular evidence
-
Edgecombe GD, Giribet G. 2008. A New Zealand species of the trans-Tasman centipede order Craterostigmomorpha (Arthropoda:Chilopoda) corroborated by molecular evidence. Invert Syst. 22:1-15.
-
(2008)
Invert Syst.
, vol.22
, pp. 1-15
-
-
Edgecombe, G.D.1
Giribet, G.2
-
19
-
-
58249100073
-
Is a new and general theory of molecular systematics emerging?
-
Edwards SV. 2009. Is a new and general theory of molecular systematics emerging? Evolution 63:1-19.
-
(2009)
Evolution
, vol.63
, pp. 1-19
-
-
Edwards, S.V.1
-
20
-
-
3242701529
-
Modeling compositional heterogeneity
-
Foster P. 2004. Modeling compositional heterogeneity. Syst Biol. 53: 485-495.
-
(2004)
Syst Biol.
, vol.53
, pp. 485-495
-
-
Foster, P.1
-
21
-
-
84870431038
-
CD-HIT: Accelerated for clustering the next-generation sequencing data
-
Fu LM, Niu BF, Zhu ZW, Wu ST, Li WZ. 2012. CD-HIT: accelerated for clustering the next-generation sequencing data. Bioinformatics 28: 3150-3152.
-
(2012)
Bioinformatics
, vol.28
, pp. 3150-3152
-
-
Fu, L.M.1
Niu, B.F.2
Zhu, Z.W.3
Wu, S.T.4
Li, W.Z.5
-
22
-
-
0001510660
-
Internal phylogeny of the Chilopoda (Myriapoda, Arthropoda) using complete 18S rDNA and partial 28S rDNA sequences
-
Giribet G, Carranza S, Riutort M, Baguñà J, Ribera C. 1999. Internal phylogeny of the Chilopoda (Myriapoda, Arthropoda) using complete 18S rDNA and partial 28S rDNA sequences. Philos Trans R Soc Lond B Biol Sci. 354:215-222.
-
(1999)
Philos Trans R Soc Lond B Biol Sci.
, vol.354
, pp. 215-222
-
-
Giribet, G.1
Carranza, S.2
Riutort, M.3
Baguñà, J.4
Ribera, C.5
-
23
-
-
33645754475
-
Conflict between data sets and phylogeny of centipedes: An analysis based on seven genes and morphology
-
Giribet G, Edgecombe GD. 2006. Conflict between data sets and phylogeny of centipedes: an analysis based on seven genes and morphology. Proc R Soc B Biol Sci. 273:531-538.
-
(2006)
Proc R Soc B Biol Sci.
, vol.273
, pp. 531-538
-
-
Giribet, G.1
Edgecombe, G.D.2
-
24
-
-
79960264362
-
Fulllength transcriptome assembly from RNA-Seq data without a reference genome
-
Grabherr MG, Haas BJ, Yassour M, Levin JZ, Thompson DA, Amit I, Adiconis X, Fan L, Raychowdhury R, Zeng Q, et al. 2011. Fulllength transcriptome assembly from RNA-Seq data without a reference genome. Nat Biotechnol. 29:644-652.
-
(2011)
Nat Biotechnol.
, vol.29
, pp. 644-652
-
-
Grabherr, M.G.1
Haas, B.J.2
Yassour, M.3
Levin, J.Z.4
Thompson, D.A.5
Amit, I.6
Adiconis, X.7
Fan, L.8
Raychowdhury, R.9
Zeng, Q.10
-
25
-
-
81855212676
-
The genome of Tetranychus urticae reveals herbivorous pest adaptations
-
Grbic M, Van Leeuwen T, Clark RM, Rombauts S, Rouzé P, Grbić V, Osborne EJ, Dermauw W, Ngoc PC, Ortego F, et al. 2011. The genome of Tetranychus urticae reveals herbivorous pest adaptations. Nature 479:487-492.
-
(2011)
Nature
, vol.479
, pp. 487-492
-
-
Grbic, M.1
Van Leeuwen, T.2
Clark, R.M.3
Rombauts, S.4
Rouzé, P.5
Grbić, V.6
Osborne, E.J.7
Dermauw, W.8
Ngoc, P.C.9
Ortego, F.10
-
26
-
-
84876552254
-
SuperQ: Computing supernetworks from quartets
-
Grünewald S, Spillner A, Bastkowski S, Bogershausen A, Moulton V. 2013. SuperQ: computing supernetworks from quartets. IEEE/ACM Trans Comput Biol Bioinform. 10:151-160.
-
(2013)
IEEE/ACM Trans Comput Biol Bioinform.
, vol.10
, pp. 151-160
-
-
Grünewald, S.1
Spillner, A.2
Bastkowski, S.3
Bogershausen, A.4
Moulton, V.5
-
27
-
-
84880266648
-
De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis
-
Haas BJ, Papanicolaou A, Yassour M, Grabherr M, Blood PD, Bowden J, Couger MB, Eccles D, Li B, Lieber M, et al. 2013. De novo transcript sequence reconstruction from RNA-seq using the Trinity platform for reference generation and analysis. Nat Protoc. 8: 1494-1512.
-
(2013)
Nat Protoc.
, vol.8
, pp. 1494-1512
-
-
Haas, B.J.1
Papanicolaou, A.2
Yassour, M.3
Grabherr, M.4
Blood, P.D.5
Bowden, J.6
Couger, M.B.7
Eccles, D.8
Li, B.9
Lieber, M.10
-
28
-
-
84856025326
-
Exploiting gene families for phylogenomic analysis of myzostomid transcriptome data
-
Hartmann S, Helm C, Nickel B, Meyer M, Struck TH, Tiedemann R, Selbig J, Bleidorn C. 2012. Exploiting gene families for phylogenomic analysis of myzostomid transcriptome data. PLoS One 7:e29843.
-
(2012)
PLoS One
, vol.7
-
-
Hartmann, S.1
Helm, C.2
Nickel, B.3
Meyer, M.4
Struck, T.H.5
Tiedemann, R.6
Selbig, J.7
Bleidorn, C.8
-
29
-
-
72749099971
-
Assessing the root of bilaterian animals with scalable phylogenomicmethods
-
Hejnol A, Obst M, Stamatakis A, Ott M, Rouse GW, Edgecombe GD, Martinez P, Baguñà J, Bailly X, Jondelius U, et al. 2009. Assessing the root of bilaterian animals with scalable phylogenomicmethods. Proc R Soc B Biol Sci. 276:4261-4270.
-
(2009)
Proc R Soc B Biol Sci.
, vol.276
, pp. 4261-4270
-
-
Hejnol, A.1
Obst, M.2
Stamatakis, A.3
Ott, M.4
Rouse, G.W.5
Edgecombe, G.D.6
Martinez, P.7
Baguñà, J.8
Bailly, X.9
Jondelius, U.10
-
30
-
-
0010295802
-
Tracheal systems in Chilopoda: A comparison under phylogenetic aspects
-
Hilken G. 1997. Tracheal systems in Chilopoda: a comparison under phylogenetic aspects. Entomol Scand Suppl. 51:49-60.
-
(1997)
Entomol Scand Suppl.
, vol.51
, pp. 49-60
-
-
Hilken, G.1
-
31
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson DH, Bryant D. 2006. Application of phylogenetic networks in evolutionary studies. Mol Biol Evol. 23:254-267.
-
(2006)
Mol Biol Evol.
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
32
-
-
72049121650
-
The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times
-
Inoue J, Donoghue PCJ, Yang ZH. 2010. The impact of the representation of fossil calibrations on Bayesian estimation of species divergence times. Syst Biol. 59:74-89.
-
(2010)
Syst Biol.
, vol.59
, pp. 74-89
-
-
Inoue, J.1
Donoghue, P.C.J.2
Yang, Z.H.3
-
34
-
-
84863507534
-
Geneious basic: An integrated and extendable desktop software platform for the organization and analysis of sequence data
-
Kearse M, Moir R, Wilson A, Stones-Havas S, Cheung M, Sturrock S, Buxton S, Cooper A, Markowitz S, Duran C, et al. 2012. Geneious Basic: an integrated and extendable desktop software platform for the organization and analysis of sequence data. Bioinformatics 28: 1647-1649.
-
(2012)
Bioinformatics
, vol.28
, pp. 1647-1649
-
-
Kearse, M.1
Moir, R.2
Wilson, A.3
Stones-Havas, S.4
Cheung, M.5
Sturrock, S.6
Buxton, S.7
Cooper, A.8
Markowitz, S.9
Duran, C.10
-
35
-
-
21744435148
-
-
125 [Editorial]
-
Kennedy D. 2005. 125 [Editorial]. Science 309:19.
-
(2005)
Science
, vol.309
, pp. 19
-
-
Kennedy, D.1
-
36
-
-
84859957700
-
The preoral chamber in geophilomorph centipedes: Comparative morphology, phylogeny, and the evolution of centipede feeding structures
-
Koch M, Edgecombe GD. 2012. The preoral chamber in geophilomorph centipedes: comparative morphology, phylogeny, and the evolution of centipede feeding structures. Zool J Linn Soc. 165:1-62.
-
(2012)
Zool J Linn Soc.
, vol.165
, pp. 1-62
-
-
Koch, M.1
Edgecombe, G.D.2
-
37
-
-
80053132393
-
Phylogenomics reveals deep molluscan relationships
-
Kocot KM, Cannon JT, Todt C, Citarella MR, Kohn AB, Meyer A, Santos SR, Schander C, Moroz LL, Lieb B, et al. 2011. Phylogenomics reveals deep molluscan relationships. Nature 477:452-456.
-
(2011)
Nature
, vol.477
, pp. 452-456
-
-
Kocot, K.M.1
Cannon, J.T.2
Todt, C.3
Citarella, M.R.4
Kohn, A.B.5
Meyer, A.6
Santos, S.R.7
Schander, C.8
Moroz, L.L.9
Lieb, B.10
-
38
-
-
33847302458
-
Inconsistency of phylogenetic estimates from concatenated data under coalescence
-
Kubatko LS, Degnan JH. 2007. Inconsistency of phylogenetic estimates from concatenated data under coalescence. Syst Biol. 56:17-24.
-
(2007)
Syst Biol.
, vol.56
, pp. 17-24
-
-
Kubatko, L.S.1
Degnan, J.H.2
-
39
-
-
62349130698
-
Ultrafast and memory-efficient alignment of short DNA sequences to the human genome
-
Langmead B, Trapnell C, Pop M, Salzberg SL. 2009. Ultrafast and memory-efficient alignment of short DNA sequences to the human genome. Genome Biol. 10:R25.
-
(2009)
Genome Biol.
, vol.10
-
-
Langmead, B.1
Trapnell, C.2
Pop, M.3
Salzberg, S.L.4
-
40
-
-
2442691520
-
A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process
-
Lartillot N, Philippe H. 2004. A Bayesian mixture model for across-site heterogeneities in the amino-acid replacement process. Mol Biol Evol. 21:1095-1109.
-
(2004)
Mol Biol Evol.
, vol.21
, pp. 1095-1109
-
-
Lartillot, N.1
Philippe, H.2
-
41
-
-
40549115956
-
Improvement of molecular phylogenetic inference and the phylogeny of Bilateria
-
Lartillot N, Philippe H. 2008. Improvement of molecular phylogenetic inference and the phylogeny of Bilateria. Philos Trans R Soc Lond B Biol Sci. 363:1463-1472.
-
(2008)
Philos Trans R Soc Lond B Biol Sci.
, vol.363
, pp. 1463-1472
-
-
Lartillot, N.1
Philippe, H.2
-
42
-
-
84881629698
-
Phylo bayes MPI: Phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment
-
Lartillot N, Rodrigue N, Stubbs D, Richer J. 2013. PhyloBayes MPI: phylogenetic reconstruction with infinite mixtures of profiles in a parallel environment. Syst Biol. 62:611-615.
-
(2013)
Syst Biol.
, vol.62
, pp. 611-615
-
-
Lartillot, N.1
Rodrigue, N.2
Stubbs, D.3
Richer, J.4
-
43
-
-
84866924443
-
Modeling protein evolution with several amino acid replacement matrices depending on site rates
-
Le SQ, Dang CC, Gascuel O. 2012. Modeling protein evolution with several amino acid replacement matrices depending on site rates. Mol Biol Evol. 29:2921-2936.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 2921-2936
-
-
Le, S.Q.1
Dang, C.C.2
Gascuel, O.3
-
44
-
-
84885304485
-
Rates of phenotypic and genomic evolution during the Cambrian Explosion
-
Lee MSY, Soubrier J, Edgecombe GD. 2013. Rates of phenotypic and genomic evolution during the Cambrian Explosion. Curr Biol. 23:1-7.
-
(2013)
Curr Biol.
, vol.23
, pp. 1-7
-
-
Msy, L.1
Soubrier, J.2
Edgecombe, G.D.3
-
45
-
-
80051792622
-
Let them fall where they may: Congruence analysis in massive phylogenetically messy data sets
-
Leigh JW, Schliep K, Lopez P, Bapteste E. 2011. Let them fall where they may: congruence analysis in massive phylogenetically messy data sets. Mol Biol Evol. 28:2773-2785.
-
(2011)
Mol Biol Evol.
, vol.28
, pp. 2773-2785
-
-
Leigh, J.W.1
Schliep, K.2
Lopez, P.3
Bapteste, E.4
-
46
-
-
67449163699
-
The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference
-
Lemmon AR, Brown JM, Stanger-Hall K, Lemmon EM. 2009. The effect of ambiguous data on phylogenetic estimates obtained by maximum likelihood and Bayesian inference. Syst Biol. 58: 130-145.
-
(2009)
Syst Biol.
, vol.58
, pp. 130-145
-
-
Lemmon, A.R.1
Brown, J.M.2
Stanger-Hall, K.3
Lemmon, E.M.4
-
47
-
-
33746693659
-
Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch
-
Mallatt J, Giribet G. 2006. Further use of nearly complete 28S and 18S rRNA genes to classify Ecdysozoa: 37 more arthropods and a kinorhynch. Mol Phylogenet Evol. 40:772-794.
-
(2006)
Mol Phylogenet Evol.
, vol.40
, pp. 772-794
-
-
Mallatt, J.1
Giribet, G.2
-
48
-
-
77958144939
-
A phylogenomic approach to resolve the arthropod tree of life
-
Meusemann K, von Reumont BM, Simon S, Roeding F, Strauss S, Kück P, Ebersberger I,Walzl M, Pass G, Breuers S, et al. 2010. A phylogenomic approach to resolve the arthropod tree of life. Mol Biol Evol. 27: 2451-2464.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 2451-2464
-
-
Meusemann, K.1
Von Reumont, B.M.2
Simon, S.3
Roeding, F.4
Strauss, S.5
Kück, P.6
Ebersberger, I.7
Walzl, M.8
Pass, G.9
Breuers, S.10
-
49
-
-
32944474183
-
Fine structural organization of the lateral ocelli in two species of Scolopendra (Chilopoda: Pleurostigmophora): An evolutionary evaluation
-
Müller CHG, Meyer-Rochow VB. 2006. Fine structural organization of the lateral ocelli in two species of Scolopendra (Chilopoda: Pleurostigmophora): an evolutionary evaluation. Zoomorphology 125:13-26.
-
(2006)
Zoomorphology
, vol.125
, pp. 13-26
-
-
Müller, C.H.G.1
Meyer-Rochow, V.B.2
-
50
-
-
77956230468
-
Including secondary structure, fossils and molecular dating in the centipede tree of life
-
Murienne J, Edgecombe GD, Giribet G. 2010. Including secondary structure, fossils and molecular dating in the centipede tree of life. Mol Phylogenet Evol. 57:301-313.
-
(2010)
Mol Phylogenet Evol.
, vol.57
, pp. 301-313
-
-
Murienne, J.1
Edgecombe, G.D.2
Giribet, G.3
-
51
-
-
84875056107
-
Deep metazoan phylogeny: When different genes tell different stories
-
Nosenko T, Schreiber F, Adamska M, Adamski M, Eitel M, Hammel J, MaldonadoM,MüllerWE, Nickel M, Schierwater B, et al. 2013. Deep metazoan phylogeny: when different genes tell different stories. Mol Phylogenet Evol. 67:223-233.
-
(2013)
Mol Phylogenet Evol.
, vol.67
, pp. 223-233
-
-
Nosenko, T.1
Schreiber, F.2
Adamska, M.3
Adamski, M.4
Eitel, M.5
Hammel, J.6
Maldonado, M.7
Müller, W.E.8
Nickel, M.9
Schierwater, B.10
-
52
-
-
79953716259
-
Resolving difficult phylogenetic questions: Why more sequences are not enough
-
Philippe H, Brinkmann H, Lavrov DV, Littlewood DTJ, Manuel M, Wörheide G, Baurain D. 2011. Resolving difficult phylogenetic questions: why more sequences are not enough. PLoS Biol. 9: e1000602.
-
(2011)
PLoS Biol.
, vol.9
-
-
Philippe, H.1
Brinkmann, H.2
Lavrov, D.V.3
Dtj, L.4
Manuel, M.5
Wörheide, G.6
Baurain, D.7
-
53
-
-
33749516796
-
Large-scale sequencing and the new animal phylogeny
-
Philippe H, TelfordMJ. 2006. Large-scale sequencing and the new animal phylogeny. Trends Ecol Evol. 21:614-620.
-
(2006)
Trends Ecol Evol.
, vol.21
, pp. 614-620
-
-
Philippe, H.1
Telford, M.J.2
-
54
-
-
77955497041
-
Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships
-
Pick KS, Philippe H, Schreiber F, Erpenbeck D, Jackson DJ, Wrede P, Wiens M, Alié A, Morgenstern B, Manuel M, et al. 2010. Improved phylogenomic taxon sampling noticeably affects nonbilaterian relationships. Mol Biol Evol. 27: 1983-1987.
-
(2010)
Mol Biol Evol.
, vol.27
, pp. 1983-1987
-
-
Pick, K.S.1
Philippe, H.2
Schreiber, F.3
Erpenbeck, D.4
Jackson, D.J.5
Wrede, P.6
Wiens, M.7
Alié, A.8
Morgenstern, B.9
Manuel, M.10
-
55
-
-
0010259130
-
A new and annectant type of chilopod
-
Pocock RI. 1902. A new and annectant type of chilopod. Quart J Microsc Sci. 45:417-448.
-
(1902)
Quart J Microsc Sci.
, vol.45
, pp. 417-448
-
-
Pocock, R.I.1
-
56
-
-
77949718257
-
FastTree 2-approximately maximum-likelihood trees for large alignments
-
Price MN, Dehal PS, Arkin AP. 2010. FastTree 2-approximately maximum-likelihood trees for large alignments. PLoS One 5:e9490.
-
(2010)
PLoS One
, vol.5
-
-
Price, M.N.1
Dehal, P.S.2
Arkin, A.P.3
-
57
-
-
84901425843
-
Supernumerary Malpighian tubules in chilopods
-
Prunescu C-C, Prunescu P. 1996. Supernumerary Malpighian tubules in chilopods. Acta Myriapodol. 169:437-440.
-
(1996)
Acta Myriapodol.
, vol.169
, pp. 437-440
-
-
Prunescu, C.-C.1
Prunescu, P.2
-
58
-
-
40949086914
-
Rudimentary supernumerary Malpighian tubules in the order Craterostigmomorpha Pocock 1902
-
Prunescu C-C, Prunescu P. 2006. Rudimentary supernumerary Malpighian tubules in the order Craterostigmomorpha Pocock 1902. Norwegian J Entomol. 53:113-118.
-
(2006)
Norwegian J Entomol.
, vol.53
, pp. 113-118
-
-
Prunescu, C.-C.1
Prunescu, P.2
-
59
-
-
77649189590
-
Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences
-
Regier JC, Shultz JW, Zwick A, Hussey A, Ball B, Wetzer R, Martin JW, Cunningham CW. 2010. Arthropod relationships revealed by phylogenomic analysis of nuclear protein-coding sequences. Nature 463: 1079-1083.
-
(2010)
Nature
, vol.463
, pp. 1079-1083
-
-
Regier, J.C.1
Shultz, J.W.2
Zwick, A.3
Hussey, A.4
Ball, B.5
Wetzer, R.6
Martin, J.W.7
Cunningham, C.W.8
-
60
-
-
9744246914
-
Phylogenetic analysis of Myriapoda using three nuclear protein-coding genes
-
Regier JC, Wilson HM, Shultz JW. 2005. Phylogenetic analysis of Myriapoda using three nuclear protein-coding genes. Mol Phylogenet Evol. 34:147-158.
-
(2005)
Mol Phylogenet Evol.
, vol.34
, pp. 147-158
-
-
Regier, J.C.1
Wilson, H.M.2
Shultz, J.W.3
-
61
-
-
80055121128
-
Dating the arthropod tree based on large-scale transcriptome data
-
Rehm P, Borner J, Meusemann K, von Reumont BM, Simon S, Hadrys H, Misof B, Burmester T. 2011. Dating the arthropod tree based on large-scale transcriptome data. Mol Phylogenet Evol. 61:880-887.
-
(2011)
Mol Phylogenet Evol.
, vol.61
, pp. 880-887
-
-
Rehm, P.1
Borner, J.2
Meusemann, K.3
Von Reumont, B.M.4
Simon, S.5
Hadrys, H.6
Misof, B.7
Burmester, T.8
-
62
-
-
84875224424
-
Molecular timetrees reveal a Cambrian colonization of land and a new scenario for ecdysozoan evolution
-
Rota-Stabelli O, Daley AC, Pisani D. 2013. Molecular timetrees reveal a Cambrian colonization of land and a new scenario for ecdysozoan evolution. Curr Biol. 23:392-398.
-
(2013)
Curr Biol.
, vol.23
, pp. 392-398
-
-
Rota-Stabelli, O.1
Daley, A.C.2
Pisani, D.3
-
63
-
-
84871842306
-
Impact of missing data on phylogenies inferred from empirical phylogenomic data sets
-
Roure B, Baurain D, Philippe H. 2013. Impact of missing data on phylogenies inferred from empirical phylogenomic data sets. Mol Biol Evol. 30:197-214.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 197-214
-
-
Roure, B.1
Baurain, D.2
Philippe, H.3
-
64
-
-
79954579960
-
Evaluating ortholog prediction algorithms in a yeast model clade
-
Salichos L, Rokas A. 2011. Evaluating ortholog prediction algorithms in a yeast model clade. PLoS One 6:e18755.
-
(2011)
PLoS One
, vol.6
-
-
Salichos, L.1
Rokas, A.2
-
65
-
-
84878113118
-
Inferring ancient divergences requires genes with strong phylogenetic signals
-
Salichos L, Rokas A. 2013. Inferring ancient divergences requires genes with strong phylogenetic signals. Nature 497:327-331.
-
(2013)
Nature
, vol.497
, pp. 327-331
-
-
Salichos, L.1
Rokas, A.2
-
66
-
-
84898641369
-
Novel information theory-based measures for quantifying incongruence among phylogenetic trees
-
Salichos L, Stamatakis A, Rokas A. 2014. Novel information theory-based measures for quantifying incongruence among phylogenetic trees. Mol Biol Evol. 31(5):1261-1271.
-
(2014)
Mol Biol Evol.
, vol.31
, Issue.5
, pp. 1261-1271
-
-
Salichos, L.1
Stamatakis, A.2
Rokas, A.3
-
67
-
-
0002397153
-
Devonobiomorpha, a new order of centipeds (Chilopoda) from the middle Devonian of Gilboa, New York State, USA, and the phylogeny of centiped orders
-
Shear WA, Bonamo PM. 1988. Devonobiomorpha, a new order of centipeds (Chilopoda) from the middle Devonian of Gilboa, New York State, USA, and the phylogeny of centiped orders. Am Mus Novitates. 2927:1-30.
-
(1988)
Am Mus Novitates.
, vol.2927
, pp. 1-30
-
-
Shear, W.A.1
Bonamo, P.M.2
-
68
-
-
77950551889
-
The geological record and phylogeny of Myriapoda
-
Shear WA, Edgecombe GD. 2010. The geological record and phylogeny of Myriapoda. Arthropod Struct Dev. 39:174-190.
-
(2010)
Arthropod Struct Dev.
, vol.39
, pp. 174-190
-
-
Shear, W.A.1
Edgecombe, G.D.2
-
69
-
-
0001896444
-
Centiped legs (Arthropoda, Chilopoda, Scutigeromorpha) from the Silurian and Devonian of Britain and the devonian of North America
-
Shear WA, Jeram AJ, Selden PA. 1998. Centiped legs (Arthropoda, Chilopoda, Scutigeromorpha) from the Silurian and Devonian of Britain and the Devonian of North America. Am Mus Novitates. 3231:1-16.
-
(1998)
Am Mus Novitates.
, vol.3231
, pp. 1-16
-
-
Shear, W.A.1
Jeram, A.J.2
Selden, P.A.3
-
70
-
-
0002073226
-
Progress toward a molecular phylogeny of the centipede orders (Chilopoda)
-
Shultz JW, Regier JC. 1997. Progress toward a molecular phylogeny of the centipede orders (Chilopoda). Entomol Scand Suppl. 51:25-32.
-
(1997)
Entomol Scand Suppl.
, vol.51
, pp. 25-32
-
-
Shultz, J.W.1
Regier, J.C.2
-
71
-
-
83555166100
-
Resolving the evolutionary relationships of molluscs with phylogenomic tools
-
Smith S, Wilson NG, Goetz F, Feehery C, Andrade SCS, Rouse GW, Giribet G, Dunn CW. 2011. Resolving the evolutionary relationships of molluscs with phylogenomic tools. Nature 480:364-367.
-
(2011)
Nature
, vol.480
, pp. 364-367
-
-
Smith, S.1
Wilson, N.G.2
Goetz, F.3
Feehery, C.4
Scs, A.5
Rouse, G.W.6
Giribet, G.7
Dunn, C.W.8
-
72
-
-
40049112246
-
Phyutility: A phyloinformatics tool for trees, alignments and molecular data
-
Smith SA, Dunn CW. 2008. Phyutility: a phyloinformatics tool for trees, alignments and molecular data. Bioinformatics 24:715-716.
-
(2008)
Bioinformatics
, vol.24
, pp. 715-716
-
-
Smith, S.A.1
Dunn, C.W.2
-
73
-
-
79952254741
-
Phylogenomic analyses unravel annelid evolution
-
Struck TH, Paul C, Hill N, Hartmann S, Hösel C, Kube M, Lieb B, Meyer A, Tiedemann R, Purschke G, et al. 2011. Phylogenomic analyses unravel annelid evolution. Nature 471:95-98.
-
(2011)
Nature
, vol.471
, pp. 95-98
-
-
Struck, T.H.1
Paul, C.2
Hill, N.3
Hartmann, S.4
Hösel, C.5
Kube, M.6
Lieb, B.7
Meyer, A.8
Tiedemann, R.9
Purschke, G.10
-
74
-
-
77954202497
-
Dendro Py: A Python library for phylogenetic computing
-
Sukumaran J, Holder MT. 2010. DendroPy: a Python library for phylogenetic computing. Bioinformatics 26:1569-1571.
-
(2010)
Bioinformatics
, vol.26
, pp. 1569-1571
-
-
Sukumaran, J.1
Holder, M.T.2
-
75
-
-
0010269895
-
Gliederfüssler: Arthropoda: Klasse chilopoda
-
abt. 2, Buch 1. Leipzig (Germany): Akademische Verlagsgesellschaft
-
Verhoeff KW. 1902-1925. Gliederfüssler: Arthropoda: Klasse Chilopoda. In: Klassen und Ordnungen des Tierreichs 5, abt. 2, Buch 1. Leipzig (Germany): Akademische Verlagsgesellschaft. 725.
-
(1902)
Klassen und Ordnungen des Tierreichs
, vol.5
, pp. 725
-
-
Verhoeff, K.W.1
-
76
-
-
84857215053
-
Pancrustacean phylogeny in the light of new phylogenomic data: Support for Remipedia as the possible sister group of Hexapoda
-
von Reumont BM, Jenner RA, Wills MA, Dell'ampio E, Pass G, Ebersberger I, Meyer B, Koenemann S, Iliffe TM, Stamatakis A, et al. 2012. Pancrustacean phylogeny in the light of new phylogenomic data: support for Remipedia as the possible sister group of Hexapoda. Mol Biol Evol. 29:1031-1045.
-
(2012)
Mol Biol Evol.
, vol.29
, pp. 1031-1045
-
-
Von Reumont, B.M.1
Jenner, R.A.2
Wills, M.A.3
Dell'Ampio, E.4
Pass, G.5
Ebersberger, I.6
Meyer, B.7
Koenemann, S.8
Iliffe, T.M.9
Stamatakis, A.10
-
77
-
-
0346462945
-
Morphology and taxonomy of paleozoic millipedes (Diplopoda: Chilognatha: Archipolypoda) from Scotland
-
Wilson HM, Anderson LI. 2004. Morphology and taxonomy of Paleozoic millipedes (Diplopoda: Chilognatha: Archipolypoda) from Scotland. J Paleontol. 78:169-184.
-
(2004)
J Paleontol.
, vol.78
, pp. 169-184
-
-
Wilson, H.M.1
Anderson, L.I.2
-
78
-
-
0036655122
-
The circulatory system in Chilopoda: Functional morphology and phylogenetic aspects
-
Wirkner CS, Pass G. 2002. The circulatory system in Chilopoda: functional morphology and phylogenetic aspects. Acta Zool. 83: 193-202.
-
(2002)
Acta Zool.
, vol.83
, pp. 193-202
-
-
Wirkner, C.S.1
Pass, G.2
-
79
-
-
84855824416
-
Accounting for alignment uncertainty in phylogenomics
-
Wu M, Chatterji S, Eisen JA. 2012. Accounting for alignment uncertainty in phylogenomics. PLoS One 7:e30288.
-
(2012)
PLoS One
, vol.7
-
-
Wu, M.1
Chatterji, S.2
Eisen, J.A.3
-
80
-
-
28944451210
-
Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds
-
Yang Z, Rannala B. 2006. Bayesian estimation of species divergence times under a molecular clock using multiple fossil calibrations with soft bounds. Mol Biol Evol. 23:212-226.
-
(2006)
Mol Biol Evol.
, vol.23
, pp. 212-226
-
-
Yang, Z.1
Rannala, B.2
-
81
-
-
84879304797
-
Improving phylogenetic inference with a semiempirical amino acid substitution model
-
Zoller S, Schneider A. 2013. Improving phylogenetic inference with a semiempirical amino acid substitution model. Mol Biol Evol. 30: 469-479.
-
(2013)
Mol Biol Evol.
, vol.30
, pp. 469-479
-
-
Zoller, S.1
Schneider, A.2
|