-
1
-
-
1842429937
-
Ancient invasions: From endosymbionts to organelles
-
Dyall SD, Brown MT, Johnson PJ (2004) Ancient invasions: from endosymbionts to organelles. Science 304:253–257.
-
(2004)
Science
, vol.304
, pp. 253-257
-
-
Dyall, S.D.1
Brown, M.T.2
Johnson, P.J.3
-
2
-
-
52649157111
-
A comparative analysis of two conserved motifs in bacterial poly(A) polymerase and CCA- adding enzyme
-
Just A, Butter F, Trenkmann M et al (2008) A comparative analysis of two conserved motifs in bacterial poly(A) polymerase and CCA- adding enzyme. Nucleic Acids Res 36:5212–5220.
-
(2008)
Nucleic Acids Res
, vol.36
, pp. 5212-5220
-
-
Just, A.1
Butter, F.2
Trenkmann, M.3
-
3
-
-
0026475908
-
Identification of the gene for an Escherichia coli poly(A) polymerase
-
Cao GJ, Sarkar N (1992) Identification of the gene for an Escherichia coli poly(A) polymerase. Proc Natl Acad Sci U S A 89: 10380–10384.
-
(1992)
Proc Natl Acad Sci U S A
, vol.89
, pp. 10380-10384
-
-
Cao, G.J.1
Sarkar, N.2
-
4
-
-
23344451161
-
Defining the domains of human polynucleotide phosphorylase (HPNPaseOLD-35) mediating cellular senescence
-
Sarkar D, Park ES, Emdad L et al (2005) Defining the domains of human polynucleotide phosphorylase (hPNPaseOLD-35) mediating cellular senescence. Mol Cell Biol 25:7333–7343.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 7333-7343
-
-
Sarkar, D.1
Park, E.S.2
Emdad, L.3
-
5
-
-
0032970686
-
Poly(A) polymerase I of Escherichia coli: Characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation
-
Raynal LC, Carpousis AJ (1999) Poly(A) polymerase I of Escherichia coli: characterization of the catalytic domain, an RNA binding site and regions for the interaction with proteins involved in mRNA degradation. Mol Microbiol 32:765–775.
-
(1999)
Mol Microbiol
, vol.32
, pp. 765-775
-
-
Raynal, L.C.1
Carpousis, A.J.2
-
6
-
-
0034160029
-
Characterization of the E. Coli poly(A) polymerase: Nucleotide specificity, RNA-binding affinities and RNA structure dependence
-
Yehudai-Resheff S, Schuster G (2000) Characterization of the E. coli poly(A) polymerase: nucleotide specificity, RNA-binding affinities and RNA structure dependence. Nucleic Acids Res 28:1139–1144.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 1139-1144
-
-
Yehudai-Resheff, S.1
Schuster, G.2
-
7
-
-
0034710943
-
Polynucleotide phosphorylase functions both as a 3′ right-arrow 5′ exonuclease and a poly(A) polymerase in Escherichia coli
-
Mohanty BK, Kushner SR (2000) Polynucleotide phosphorylase functions both as a 3′ right-arrow 5′ exonuclease and a poly(A) polymerase in Escherichia coli. Proc Natl Acad Sci U S A 97:11966–11971.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 11966-11971
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
8
-
-
67649476386
-
Polyadenylation in Arabidopsis and Chlamydomonas organelles: The input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase
-
Zimmer SL, Schein A, Zipor G et al (2009) Polyadenylation in Arabidopsis and Chlamydomonas organelles: the input of nucleotidyltransferases, poly(A) polymerases and polynucleotide phosphorylase. Plant J 59:88–99.
-
(2009)
Plant J
, vol.59
, pp. 88-99
-
-
Zimmer, S.L.1
Schein, A.2
Zipor, G.3
-
9
-
-
64049109732
-
RNA polyadenylation and decay in mitochondria and chloroplasts
-
Schuster G, Stern D (2009) RNA polyadenylation and decay in mitochondria and chloroplasts. Prog Mol Biol Transl Sci 85: 393–422.
-
(2009)
Prog Mol Biol Transl Sci
, vol.85
, pp. 393-422
-
-
Schuster, G.1
Stern, D.2
-
10
-
-
0016351601
-
Yeast mitochondrial RNA does not contain poly(A)
-
Groot GS, Flavell RA, Van Ommen GJ et al (1974) Yeast mitochondrial RNA does not contain poly(A). Nature 252:167–169.
-
(1974)
Nature
, vol.252
, pp. 167-169
-
-
Groot, G.S.1
Flavell, R.A.2
Van Ommen, G.J.3
-
11
-
-
0034003545
-
Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated
-
Wang SW, Toda T, MacCallum R et al (2000) Cid1, a fission yeast protein required for S-M checkpoint control when DNA polymerase delta or epsilon is inactivated. Mol Cell Biol 20:3234–3244.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 3234-3244
-
-
Wang, S.W.1
Toda, T.2
Maccallum, R.3
-
12
-
-
44649128170
-
3′ adenylation determines mRNA abundance and monitors completion of RNA editing in T. Brucei mitochondria
-
Etheridge RD, Aphasizheva I, Gershon PD et al (2008) 3′ adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria. EMBO J 27:1596–1608.
-
(2008)
EMBO J
, vol.27
, pp. 1596-1608
-
-
Etheridge, R.D.1
Aphasizheva, I.2
Gershon, P.D.3
-
13
-
-
11344287222
-
Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase
-
Tomecki R, Dmochowska A, Gewartowski K et al (2004) Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase. Nucleic Acids Res 32:6001–6014.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 6001-6014
-
-
Tomecki, R.1
Dmochowska, A.2
Gewartowski, K.3
-
14
-
-
21244454028
-
Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria- specific poly(A) polymerase and polynucleotide phosphorylase
-
Nagaike T, Suzuki T, Katoh T et al (2005) Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria- specific poly(A) polymerase and polynucleotide phosphorylase. J Biol Chem 280:19721–19727.
-
(2005)
J Biol Chem
, vol.280
, pp. 19721-19727
-
-
Nagaike, T.1
Suzuki, T.2
Katoh, T.3
-
15
-
-
79251554375
-
Structural basis for dimerization and activity of human PAPD1, a noncanonical poly(A) polymerase
-
Bai Y, Srivastava SK, Chang JH et al (2011) Structural basis for dimerization and activity of human PAPD1, a noncanonical poly(A) polymerase. Mol Cell 41:311–320.
-
(2011)
Mol Cell
, vol.41
, pp. 311-320
-
-
Bai, Y.1
Srivastava, S.K.2
Chang, J.H.3
-
16
-
-
79953326716
-
Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes
-
Aphasizheva I, Maslov D, Wang X et al (2011) Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes. Mol Cell 42:106–117.
-
(2011)
Mol Cell
, vol.42
, pp. 106-117
-
-
Aphasizheva, I.1
Maslov, D.2
Wang, X.3
-
17
-
-
0001486263
-
Enzymatic synthesis of nucleic acidlike polynucleotides
-
Grunberg-Manago M, Oritz PJ, Ochoa S (1955) Enzymatic synthesis of nucleic acidlike polynucleotides. Science 122:907–910.
-
(1955)
Science
, vol.122
, pp. 907-910
-
-
Grunberg-Manago, M.1
Oritz, P.J.2
Ochoa, S.3
-
19
-
-
0034435974
-
A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation
-
Symmons MF, Jones GH, Luisi BF (2000) A duplicated fold is the structural basis for polynucleotide phosphorylase catalytic activity, processivity, and regulation. Structure 8: 1215–1226.
-
(2000)
Structure
, vol.8
, pp. 1215-1226
-
-
Symmons, M.F.1
Jones, G.H.2
Luisi, B.F.3
-
20
-
-
33845407784
-
Reconstitution, activities, and structure of the eukaryotic RNA exosome
-
Liu Q, Greimann JC, Lima CD (2006) Reconstitution, activities, and structure of the eukaryotic RNA exosome. Cell 127: 1223–1237.
-
(2006)
Cell
, vol.127
, pp. 1223-1237
-
-
Liu, Q.1
Greimann, J.C.2
Lima, C.D.3
-
22
-
-
84864318790
-
Of P and Z: Mitochondrial tRNA processing enzymes
-
Rossmanith W (2012) Of P and Z: mitochondrial tRNA processing enzymes. Biochim Biophys Acta 1819:1017–1026.
-
(2012)
Biochim Biophys Acta
, vol.1819
, pp. 1017-1026
-
-
Rossmanith, W.1
-
23
-
-
84862227617
-
The posttranscriptional life of mammalian mitochondrial RNA
-
Rorbach J, Minczuk M (2012) The posttranscriptional life of mammalian mitochondrial RNA. Biochem J 444:357–373.
-
(2012)
Biochem J
, vol.444
, pp. 357-373
-
-
Rorbach, J.1
Minczuk, M.2
-
24
-
-
77953790077
-
RNA turnover in human mitochondria: More questions than answers?
-
Borowski LS, Szczesny RJ, Brzezniak LK et al (2010) RNA turnover in human mitochondria: more questions than answers? Biochim Biophys Acta 1797:1066–1070.
-
(2010)
Biochim Biophys Acta
, vol.1797
, pp. 1066-1070
-
-
Borowski, L.S.1
Szczesny, R.J.2
Brzezniak, L.K.3
-
25
-
-
84871321022
-
RNase E: At the interface of bacterial RNA processing and decay
-
Mackie GA (2013) RNase E: at the interface of bacterial RNA processing and decay. Nat Rev Microbiol 11:45–57.
-
(2013)
Nat Rev Microbiol
, vol.11
, pp. 45-57
-
-
Mackie, G.A.1
-
26
-
-
85011942110
-
RNase II: The finer details of the modus operandi of a molecular killer
-
Arraiano CM, Matos RG, Barbas A (2010) RNase II: the finer details of the modus operandi of a molecular killer. RNA Biol 7:276–281.
-
(2010)
RNA Biol
, vol.7
, pp. 276-281
-
-
Arraiano, C.M.1
Matos, R.G.2
Barbas, A.3
-
27
-
-
80053219536
-
PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria
-
Rorbach J, Nicholls TJ, Minczuk M (2011) PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria. Nucleic Acids Res 39:7750–7763.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 7750-7763
-
-
Rorbach, J.1
Nicholls, T.J.2
Minczuk, M.3
-
28
-
-
79956015860
-
Human 2′-phosphodiesterase localizes to the mitochondrial matrix with a putative function in mitochondrial RNA turnover
-
Poulsen JB, Andersen KR, Kjaer KH et al (2011) Human 2′-phosphodiesterase localizes to the mitochondrial matrix with a putative function in mitochondrial RNA turnover. Nucleic Acids Res 39:3754.
-
(2011)
Nucleic Acids Res
, vol.39
, pp. 3754
-
-
Poulsen, J.B.1
Ersen, K.R.2
Kjaer, K.H.3
-
29
-
-
79960433506
-
Hfq and its constellation of RNA
-
Vogel J, Luisi BF (2011) Hfq and its constellation of RNA. Nat Rev Microbiol 9: 578–589.
-
(2011)
Nat Rev Microbiol
, vol.9
, pp. 578-589
-
-
Vogel, J.1
Luisi, B.F.2
-
30
-
-
77952044399
-
Interactions of the RNA-binding protein Hfq with cspA mRNA, encoding the major cold shock protein
-
Hankins JS, Denroche H, Mackie GA (2010) Interactions of the RNA-binding protein Hfq with cspA mRNA, encoding the major cold shock protein. J Bacteriol 192:2482–2490.
-
(2010)
J Bacteriol
, vol.192
, pp. 2482-2490
-
-
Hankins, J.S.1
Denroche, H.2
Mackie, G.A.3
-
31
-
-
0035943737
-
Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase
-
Feng Y, Huang H, Liao J et al (2001) Escherichia coli poly(A)-binding proteins that interact with components of degradosomes or impede RNA decay mediated by polynucleotide phosphorylase and RNase E. J Biol Chem 276:31651–31656.
-
(2001)
E. J Biol Chem
, vol.276
, pp. 31651-31656
-
-
Feng, Y.1
Huang, H.2
Liao, J.3
-
32
-
-
0032478202
-
A poly(A) binding protein functions in the chloroplast as a message-specific translation factor
-
Yohn CB, Cohen A, Danon A et al (1998) A poly(A) binding protein functions in the chloroplast as a message-specific translation factor. Proc Natl Acad Sci U S A 95:2238–2243.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 2238-2243
-
-
Yohn, C.B.1
Cohen, A.2
Danon, A.3
-
33
-
-
84876395971
-
Alternative translation initiation augments the human mitochondrial proteome
-
Kazak L, Reyes A, Duncan AL et al (2013) Alternative translation initiation augments the human mitochondrial proteome. Nucleic Acids Res 41:2354–2369.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 2354-2369
-
-
Kazak, L.1
Reyes, A.2
Duncan, A.L.3
-
34
-
-
56549095978
-
Pentatricopeptide repeat proteins: A socket set for organelle gene expression
-
Schmitz-Linneweber C, Small I (2008) Pentatricopeptide repeat proteins: a socket set for organelle gene expression. Trends Plant Sci 13:663–670.
-
(2008)
Trends Plant Sci
, vol.13
, pp. 663-670
-
-
Schmitz-Linneweber, C.1
Small, I.2
-
35
-
-
84869822219
-
LRPPRC/SLIRP suppresses PNPasemediated mRNA decay and promotes polyadenylation in human mitochondria
-
Chujo T, Ohira T, Sakaguchi Y et al (2012) LRPPRC/SLIRP suppresses PNPasemediated mRNA decay and promotes polyadenylation in human mitochondria. Nucleic Acids Res 40:8033–8047.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 8033-8047
-
-
Chujo, T.1
Ohira, T.2
Sakaguchi, Y.3
-
36
-
-
84857192195
-
LRPPRC is necessary for polyadenylation and coordination of translation of mitochondrial mRNAs
-
Ruzzenente B, Metodiev MD, Wredenberg A et al (2011) LRPPRC is necessary for polyadenylation and coordination of translation of mitochondrial mRNAs. EMBO J 31:443.
-
(2011)
EMBO J
, vol.31
, pp. 443
-
-
Ruzzenente, B.1
Metodiev, M.D.2
Wredenberg, A.3
-
37
-
-
0001684759
-
Ribonucleic acid-dependent ribonucleotide incorporation. I. Purification and properties of the enzyme
-
August JT, Ortiz PJ, Hurwitz J (1962) Ribonucleic acid-dependent ribonucleotide incorporation. I. Purification and properties of the enzyme. J Biol Chem 237:3786–3793.
-
(1962)
J Biol Chem
, vol.237
, pp. 3786-3793
-
-
August, J.T.1
Ortiz, P.J.2
Hurwitz, J.3
-
38
-
-
0027267498
-
The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates
-
Xu F, Lin-Chao S, Cohen SN (1993) The Escherichia coli pcnB gene promotes adenylylation of antisense RNAI of ColE1-type plasmids in vivo and degradation of RNAI decay intermediates. Proc Natl Acad Sci U S A 90:6756–6760.
-
(1993)
Proc Natl Acad Sci U S A
, vol.90
, pp. 6756-6760
-
-
Xu, F.1
Lin-Chao, S.2
Cohen, S.N.3
-
39
-
-
0027423483
-
PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColE1-related plasmids
-
He L, Soderbom F, Wagner EG et al (1993) PcnB is required for the rapid degradation of RNAI, the antisense RNA that controls the copy number of ColE1-related plasmids. Mol Microbiol 9:1131–1142.
-
(1993)
Mol Microbiol
, vol.9
, pp. 1131-1142
-
-
He, L.1
Soderbom, F.2
Wagner, E.G.3
-
40
-
-
0033214259
-
Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase
-
Coburn GA, Miao X, Briant DJ et al (1999) Reconstitution of a minimal RNA degradosome demonstrates functional coordination between a 3′ exonuclease and a DEAD-box RNA helicase. Genes Dev 13:2594–2603.
-
(1999)
Genes Dev
, vol.13
, pp. 2594-2603
-
-
Coburn, G.A.1
Miao, X.2
Briant, D.J.3
-
41
-
-
0028923019
-
Surprises at the 3′ end of prokaryotic RNA
-
Cohen SN (1995) Surprises at the 3′ end of prokaryotic RNA. Cell 80:829–832.
-
(1995)
Cell
, vol.80
, pp. 829-832
-
-
Cohen, S.N.1
-
42
-
-
0032916509
-
MRNA degradation. A tale of poly(A) and multiprotein machines
-
Carpousis AJ, Vanzo NF, Raynal LC (1999) mRNA degradation. A tale of poly(A) and multiprotein machines. Trends Genet 15:24–28.
-
(1999)
Trends Genet
, vol.15
, pp. 24-28
-
-
Carpousis, A.J.1
Vanzo, N.F.2
Raynal, L.C.3
-
43
-
-
0031009317
-
Polyadenylation of mRNA in prokaryotes
-
Sarkar N (1997) Polyadenylation of mRNA in prokaryotes. Annu Rev Biochem 66:173–197.
-
(1997)
Annu Rev Biochem
, vol.66
, pp. 173-197
-
-
Sarkar, N.1
-
44
-
-
0028986829
-
Polyadenylylation helps regulate mRNA decay in Escherichia coli
-
O’Hara EB, Chekanova JA, Ingle CA et al (1995) Polyadenylylation helps regulate mRNA decay in Escherichia coli. Proc Natl Acad Sci U S A 92:1807–1811.
-
(1995)
Proc Natl Acad Sci U S A
, vol.92
, pp. 1807-1811
-
-
O’Hara, E.B.1
Chekanova, J.A.2
Ingle, C.A.3
-
45
-
-
0032569032
-
Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes
-
Coburn GA, Mackie GA (1998) Reconstitution of the degradation of the mRNA for ribosomal protein S20 with purified enzymes. J Mol Biol 279:1061–1074.
-
(1998)
J Mol Biol
, vol.279
, pp. 1061-1074
-
-
Coburn, G.A.1
Mackie, G.A.2
-
46
-
-
0033060320
-
Roles of polyadenylation and nucleolytic cleavage in the filamentous phage mRNA processing and decay pathways in Escherichia coli
-
Goodrich AF, Steege DA (1999) Roles of polyadenylation and nucleolytic cleavage in the filamentous phage mRNA processing and decay pathways in Escherichia coli. RNA 5:972–985.
-
(1999)
RNA
, vol.5
, pp. 972-985
-
-
Goodrich, A.F.1
Steege, D.A.2
-
47
-
-
0033457296
-
Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism
-
Mohanty BK, Kushner SR (1999) Analysis of the function of Escherichia coli poly(A) polymerase I in RNA metabolism. Mol Microbiol 34:1094–1108.
-
(1999)
Mol Microbiol
, vol.34
, pp. 1094-1108
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
48
-
-
0029891493
-
The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation
-
Haugel-Nielsen J, Hajnsdorf E, Regnier P (1996) The rpsO mRNA of Escherichia coli is polyadenylated at multiple sites resulting from endonucleolytic processing and exonucleolytic degradation. EMBO J 15:3144–3152.
-
(1996)
EMBO J
, vol.15
, pp. 3144-3152
-
-
Haugel-Nielsen, J.1
Hajnsdorf, E.2
Regnier, P.3
-
49
-
-
0036267108
-
CDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor
-
Bralley P, Jones GH (2002) cDNA cloning confirms the polyadenylation of RNA decay intermediates in Streptomyces coelicolor. Microbiology 148:1421–1425.
-
(2002)
Microbiology
, vol.148
, pp. 1421-1425
-
-
Bralley, P.1
Jones, G.H.2
-
50
-
-
21844443073
-
Addition of poly(A) and heteropolymeric 3′ ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains
-
Campos-Guillen J, Bralley P, Jones GH et al (2005) Addition of poly(A) and heteropolymeric 3′ ends in Bacillus subtilis wild-type and polynucleotide phosphorylase-deficient strains. J Bacteriol 187:4698–4706.
-
(2005)
J Bacteriol
, vol.187
, pp. 4698-4706
-
-
Campos-Guillen, J.1
Bralley, P.2
Jones, G.H.3
-
51
-
-
0038182527
-
RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli
-
Rott R, Zipor G, Portnoy V et al (2003) RNA polyadenylation and degradation in cyanobacteria are similar to the chloroplast but different from Escherichia coli. J Biol Chem 278:15771–15777.
-
(2003)
J Biol Chem
, vol.278
, pp. 15771-15777
-
-
Rott, R.1
Zipor, G.2
Portnoy, V.3
-
53
-
-
0030468099
-
Polyadenylation accelerates degradation of chloroplast mRNA
-
Kudla J, Hayes R, Gruissem W (1996) Polyadenylation accelerates degradation of chloroplast mRNA. EMBO J 15:7137–7146.
-
(1996)
EMBO J
, vol.15
, pp. 7137-7146
-
-
Kudla, J.1
Hayes, R.2
Gruissem, W.3
-
54
-
-
0029828944
-
Addition of destabilizing poly (A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA
-
Lisitsky I, Klaff P, Schuster G (1996) Addition of destabilizing poly (A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA. Proc Natl Acad Sci U S A 93:13398–13403.
-
(1996)
Proc Natl Acad Sci U S A
, vol.93
, pp. 13398-13403
-
-
Lisitsky, I.1
Klaff, P.2
Schuster, G.3
-
55
-
-
0034934778
-
Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts
-
Yehudai-Resheff S, Hirsh M, Schuster G (2001) Polynucleotide phosphorylase functions as both an exonuclease and a poly(A) polymerase in spinach chloroplasts. Mol Cell Biol 21:5408–5416.
-
(2001)
Mol Cell Biol
, vol.21
, pp. 5408-5416
-
-
Yehudai-Resheff, S.1
Hirsh, M.2
Schuster, G.3
-
56
-
-
69449096380
-
Polyadenylation-assisted RNA degradation processes in plants
-
Lange H, Sement FM, Canaday J et al (2009) Polyadenylation-assisted RNA degradation processes in plants. Trends Plant Sci 14:497–504.
-
(2009)
Trends Plant Sci
, vol.14
, pp. 497-504
-
-
Lange, H.1
Sement, F.M.2
Canaday, J.3
-
57
-
-
2442530075
-
Messenger RNA stability in mitochondria: Different means to an end
-
Gagliardi D, Stepien PP, Temperley RJ et al (2004) Messenger RNA stability in mitochondria: different means to an end. Trends Genet 20:260–267.
-
(2004)
Trends Genet
, vol.20
, pp. 260-267
-
-
Gagliardi, D.1
Stepien, P.P.2
Temperley, R.J.3
-
58
-
-
0020074053
-
Oligoadenylate is present in the mitochondrial RNA of Saccharomyces cerevisiae
-
Yuckenberg PD, Phillips SL (1982) Oligoadenylate is present in the mitochondrial RNA of Saccharomyces cerevisiae. Mol Cell Biol 2:450–456.
-
(1982)
Mol Cell Biol
, vol.2
, pp. 450-456
-
-
Yuckenberg, P.D.1
Phillips, S.L.2
-
59
-
-
0024892285
-
The role of a conserved dodecamer sequence in yeast mitochondrial gene expression
-
Butow RA, Zhu H, Perlman P et al (1989) The role of a conserved dodecamer sequence in yeast mitochondrial gene expression. Genome 31:757–760.
-
(1989)
Genome
, vol.31
, pp. 757-760
-
-
Butow, R.A.1
Zhu, H.2
Perlman, P.3
-
60
-
-
0037449772
-
The yeast mitochondrial degradosome. Its composition, interplay between RNA helicase and RNase activities and the role in mitochondrial RNA metabolism
-
Dziembowski A, Piwowarski J, Hoser R et al (2003) The yeast mitochondrial degradosome. Its composition, interplay between RNA helicase and RNase activities and the role in mitochondrial RNA metabolism. J Biol Chem 278:1603–1611.
-
(2003)
J Biol Chem
, vol.278
, pp. 1603-1611
-
-
Dziembowski, A.1
Piwowarski, J.2
Hoser, R.3
-
61
-
-
0034018551
-
UTPdependent and-independent pathways of mRNA turnover in Trypanosoma brucei mitochondria
-
Militello KT, Read LK (2000) UTPdependent and-independent pathways of mRNA turnover in Trypanosoma brucei mitochondria. Mol Cell Biol 20:2308–2316.
-
(2000)
Mol Cell Biol
, vol.20
, pp. 2308-2316
-
-
Militello, K.T.1
Read, L.K.2
-
62
-
-
17844369437
-
UTP-dependent turnover of Trypanosoma brucei mitochondrial mRNA requires UTP polymerization and involves the RET1 TUTase
-
Ryan CM, Read LK (2005) UTP-dependent turnover of Trypanosoma brucei mitochondrial mRNA requires UTP polymerization and involves the RET1 TUTase. RNA 11:763–773.
-
(2005)
RNA
, vol.11
, pp. 763-773
-
-
Ryan, C.M.1
Read, L.K.2
-
63
-
-
0042858518
-
Polyadenylation regulates the stability of Trypanosoma brucei mitochondrial RNAs
-
Ryan CM, Militello KT, Read LK (2003) Polyadenylation regulates the stability of Trypanosoma brucei mitochondrial RNAs. J Biol Chem 278:32753–32762.
-
(2003)
J Biol Chem
, vol.278
, pp. 32753-32762
-
-
Ryan, C.M.1
Militello, K.T.2
Read, L.K.3
-
64
-
-
14044264228
-
Opposing effects of polyadenylation on the stability of edited and unedited mitochondrial RNAs in Trypanosoma brucei
-
Kao CY, Read LK (2005) Opposing effects of polyadenylation on the stability of edited and unedited mitochondrial RNAs in Trypanosoma brucei. Mol Cell Biol 25:1634–1644.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 1634-1644
-
-
Kao, C.Y.1
Read, L.K.2
-
65
-
-
79960890415
-
Mitochondrial RNA processing in trypanosomes
-
Aphasizhev R, Aphasizheva I (2011) Mitochondrial RNA processing in trypanosomes. Res Microbiol 162:655–663.
-
(2011)
Res Microbiol
, vol.162
, pp. 655-663
-
-
Aphasizhev, R.1
Aphasizheva, I.2
-
66
-
-
77953871736
-
Human mitochondrial mRNAslike members of all families, similar but different
-
Temperley RJ, Wydro M, Lightowlers RN et al (2010) Human mitochondrial mRNAslike members of all families, similar but different. Biochim Biophys Acta 1797:1081–1085.
-
(2010)
Biochim Biophys Acta
, vol.1797
, pp. 1081-1085
-
-
Temperley, R.J.1
Wydro, M.2
Lightowlers, R.N.3
-
67
-
-
77954366511
-
Targeting of the cytosolic poly(A) binding protein PABPC1 to mitochondria causes mitochondrial translation inhibition
-
Wydro M, Bobrowicz A, Temperley RJ et al (2010) Targeting of the cytosolic poly(A) binding protein PABPC1 to mitochondria causes mitochondrial translation inhibition. Nucleic Acids Res 38:3732–3742.
-
(2010)
Nucleic Acids Res
, vol.38
, pp. 3732-3742
-
-
Wydro, M.1
Bobrowicz, A.2
Temperley, R.J.3
-
68
-
-
38649115643
-
Stable PNPase RNAi silencing: Its effect on the processing and adenylation of human mitochondrial RNA
-
Slomovic S, Schuster G (2008) Stable PNPase RNAi silencing: its effect on the processing and adenylation of human mitochondrial RNA. RNA 14:310–323.
-
(2008)
RNA
, vol.14
, pp. 310-323
-
-
Slomovic, S.1
Schuster, G.2
-
69
-
-
79953014914
-
Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq
-
Shepard PJ, Choi EA, Lu J et al (2011) Complex and dynamic landscape of RNA polyadenylation revealed by PAS-Seq. RNA 17:761–772.
-
(2011)
RNA
, vol.17
, pp. 761-772
-
-
Shepard, P.J.1
Choi, E.A.2
Lu, J.3
-
70
-
-
0028988981
-
Polyadenylylation destabilizes the rpsO mRNA of Escherichia coli
-
Hajnsdorf E, Braun F, Haugel-Nielsen J et al (1995) Polyadenylylation destabilizes the rpsO mRNA of Escherichia coli. Proc Natl Acad Sci U S A 92:3973–3977.
-
(1995)
Proc Natl Acad Sci U S A
, vol.92
, pp. 3973-3977
-
-
Hajnsdorf, E.1
Braun, F.2
Haugel-Nielsen, J.3
-
71
-
-
0032539857
-
3′ exoribonucleolytic trimming is a common feature of the maturation of small, stable RNAs in Escherichia coli
-
Li Z, Pandit S, Deutscher MP (1998) 3′ exoribonucleolytic trimming is a common feature of the maturation of small, stable RNAs in Escherichia coli. Proc Natl Acad Sci U S A 95:2856–2861.
-
(1998)
Proc Natl Acad Sci U S A
, vol.95
, pp. 2856-2861
-
-
Li, Z.1
Pandit, S.2
Deutscher, M.P.3
-
72
-
-
0036500552
-
RNA quality control: Degradation of defective transfer RNA
-
Li Z, Reimers S, Pandit S et al (2002) RNA quality control: degradation of defective transfer RNA. EMBO J 21:1132–1138.
-
(2002)
EMBO J
, vol.21
, pp. 1132-1138
-
-
Li, Z.1
Reimers, S.2
Pandit, S.3
-
73
-
-
84861560266
-
Polyadenylation helps regulate functional tRNA levels in Escherichia coli
-
Mohanty BK, Maples VF, Kushner SR (2012) Polyadenylation helps regulate functional tRNA levels in Escherichia coli. Nucleic Acids Res 40:4589–4603.
-
(2012)
Nucleic Acids Res
, vol.40
, pp. 4589-4603
-
-
Mohanty, B.K.1
Maples, V.F.2
Kushner, S.R.3
-
74
-
-
34250330356
-
Polyadenylation of a functional mRNA controls gene expression in Escherichia coli
-
Joanny G, Le Derout J, Brechemier-Baey D et al (2007) Polyadenylation of a functional mRNA controls gene expression in Escherichia coli. Nucleic Acids Res 35:2494–2502.
-
(2007)
Nucleic Acids Res
, vol.35
, pp. 2494-2502
-
-
Joanny, G.1
Le Derout, J.2
Brechemier-Baey, D.3
-
75
-
-
84873685962
-
Deregulation of poly(A) polymerase I in Escherichia coli inhibits protein synthesis and leads to cell death
-
Mohanty BK, Kushner SR (2013) Deregulation of poly(A) polymerase I in Escherichia coli inhibits protein synthesis and leads to cell death. Nucleic Acids Res 41:1757–1766.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 1757-1766
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
76
-
-
84958822384
-
In vivo analysis of polyadenylation in prokaryotes
-
In: Rorbach J, Bobrowicz AJ, Humana, New York
-
Mohanty BK, Kushner SR (2013) In vivo analysis of polyadenylation in prokaryotes. In: Rorbach J, Bobrowicz AJ (eds) Polyadenylation, Methods in molecular biology. Humana, New York.
-
(2013)
Polyadenylation, Methods in Molecular Biology
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
77
-
-
84958822385
-
Polyadenylation of RNA in E. Coli: RNA polymerase- associated (rA)n-synthetic activities
-
In: Rorbach J, Bobrowicz AJ, Humana, New York
-
Encalade GA, Sukhodolets MV (2013) Polyadenylation of RNA in E. coli: RNA polymerase- associated (rA)n-synthetic activities. In: Rorbach J, Bobrowicz AJ (eds) Polyadenylation, Methods in molecular biology. Humana, New York.
-
(2013)
Polyadenylation, Methods in Molecular Biology
-
-
Encalade, G.A.1
Sukhodolets, M.V.2
-
78
-
-
84958822386
-
Analysis of the human mitochondrial transcriptome using directional deep sequencing and parallel analysis of RNA ends
-
In: Rorbach J, Bobrowicz AJ, Humana, New York
-
Rackham O, Filipovska A (2013) Analysis of the human mitochondrial transcriptome using directional deep sequencing and parallel analysis of RNA ends. In: Rorbach J, Bobrowicz AJ (eds) Polyadenylation, Methods in molecular biology. Humana, New York.
-
(2013)
Polyadenylation, Methods in Molecular Biology
-
-
Rackham, O.1
Filipovska, A.2
-
79
-
-
84958822387
-
Measurement of mitochondrial RNA stability by metabolic labelling of transcripts with 4-thiouridine
-
In: Rorbach J, Bobrowicz AJ, Humana, New York
-
Borowski LS, Szczesny RJ (2013) Measurement of mitochondrial RNA stability by metabolic labelling of transcripts with 4-thiouridine. In: Rorbach J, Bobrowicz AJ (eds) Polyadenylation, Methods in molecular biology. Humana, New York.
-
(2013)
Polyadenylation, Methods in Molecular Biology
-
-
Borowski, L.S.1
Szczesny, R.J.2
-
80
-
-
7044285063
-
The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli
-
Mohanty BK, Maples VF, Kushner SR (2004) The Sm-like protein Hfq regulates polyadenylation dependent mRNA decay in Escherichia coli. Mol Microbiol 54:905–920.
-
(2004)
Mol Microbiol
, vol.54
, pp. 905-920
-
-
Mohanty, B.K.1
Maples, V.F.2
Kushner, S.R.3
-
81
-
-
33750984542
-
The majority of Escherichia coli mRNAs undergo post- transcriptional modification in exponentially growing cells
-
Mohanty BK, Kushner SR (2006) The majority of Escherichia coli mRNAs undergo post- transcriptional modification in exponentially growing cells. Nucleic Acids Res 34: 5695–5704.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 5695-5704
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
82
-
-
0141590523
-
Investigation of a pathogenic mtDNA microdeletion reveals a translation-dependent deadenylation decay pathway in human mitochondria
-
Temperley RJ, Seneca SH, Tonska K et al (2003) Investigation of a pathogenic mtDNA microdeletion reveals a translation-dependent deadenylation decay pathway in human mitochondria. Hum Mol Genet 12:2341–2348.
-
(2003)
Hum Mol Genet
, vol.12
, pp. 2341-2348
-
-
Temperley, R.J.1
Seneca, S.H.2
Tonska, K.3
-
83
-
-
1242314743
-
Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons
-
Chrzanowska-Lightowlers ZM, Temperley RJ, Smith PM et al (2004) Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons. Biochem J 377:725–731.
-
(2004)
Biochem J
, vol.377
, pp. 725-731
-
-
Chrzanowska-Lightowlers, Z.M.1
Temperley, R.J.2
Smith, P.M.3
-
85
-
-
15644361965
-
RapA, a novel RNA polymerase-associated protein, is a bacterial homolog of SWI2/SNF 2
-
Sukhodolets MV, Jin DJ (1998) RapA, a novel RNA polymerase-associated protein, is a bacterial homolog of SWI2/SNF 2. J Biol Chem 273:7018–7023.
-
(1998)
J Biol Chem
, vol.273
, pp. 7018-7023
-
-
Sukhodolets, M.V.1
Jin, D.J.2
-
86
-
-
0037709369
-
Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq
-
Sukhodolets MV, Garges S (2003) Interaction of Escherichia coli RNA polymerase with the ribosomal protein S1 and the Sm-like ATPase Hfq. Biochemistry 42:8022–8034.
-
(2003)
Biochemistry
, vol.42
, pp. 8022-8034
-
-
Sukhodolets, M.V.1
Garges, S.2
-
87
-
-
0346120328
-
Purification and activity assays of RapA, the RNA polymerase-associated homolog of the SWI/SNF protein superfamily
-
Sukhodolets MV, Garges S, Jin DJ (2003) Purification and activity assays of RapA, the RNA polymerase-associated homolog of the SWI/SNF protein superfamily. Methods Enzymol 370:283–290.
-
(2003)
Methods Enzymol
, vol.370
, pp. 283-290
-
-
Sukhodolets, M.V.1
Garges, S.2
Jin, D.J.3
-
88
-
-
0346750976
-
Escherichia coli proteins eluted from mono Q chromatography, a final step during RNA polymerase purification procedure
-
Zhi H, Yang W, Jin DJ (2003) Escherichia coli proteins eluted from mono Q chromatography, a final step during RNA polymerase purification procedure. Methods Enzymol 370:291–300.
-
(2003)
Methods Enzymol
, vol.370
, pp. 291-300
-
-
Zhi, H.1
Yang, W.2
Jin, D.J.3
-
89
-
-
79955448026
-
Oligomerization of the E. Coli core RNA polymerase: Formation of (alpha2betabeta′omega)2- DNA complexes and regulation of the oligomerization by auxiliary subunits
-
Kansara SG, Sukhodolets MV (2011) Oligomerization of the E. coli core RNA polymerase: formation of (alpha2betabeta′omega)2- DNA complexes and regulation of the oligomerization by auxiliary subunits. PLoS One 6:e18990.
-
(2011)
Plos One
, vol.6
-
-
Kansara, S.G.1
Sukhodolets, M.V.2
-
90
-
-
80052007901
-
The human mitochondrial transcriptome
-
Mercer TR, Neph S, Dinger ME et al (2011) The human mitochondrial transcriptome. Cell 146:645–658.
-
(2011)
Cell
, vol.146
, pp. 645-658
-
-
Mercer, T.R.1
Neph, S.2
Dinger, M.E.3
-
91
-
-
63849207321
-
Construction of parallel analysis of RNA ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome
-
German MA, Luo S, Schroth G et al (2009) Construction of parallel analysis of RNA ends (PARE) libraries for the study of cleaved miRNA targets and the RNA degradome. Nat Protoc 4:356–362.
-
(2009)
Nat Protoc
, vol.4
, pp. 356-362
-
-
German, M.A.1
Luo, S.2
Schroth, G.3
-
92
-
-
49449118943
-
Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends
-
German MA, Pillay M, Jeong DH et al (2008) Global identification of microRNA-target RNA pairs by parallel analysis of RNA ends. Nat Biotechnol 26:941–946.
-
(2008)
Nat Biotechnol
, vol.26
, pp. 941-946
-
-
German, M.A.1
Pillay, M.2
Jeong, D.H.3
-
93
-
-
84864293617
-
The role of mammalian PPR domain proteins in the regulation of mitochondrial gene expression
-
Rackham O, Filipovska A (2011) The role of mammalian PPR domain proteins in the regulation of mitochondrial gene expression. Biochim Biophys Acta 1819:1008.
-
(2011)
Biochim Biophys Acta
, vol.1819
, pp. 1008
-
-
Rackham, O.1
Filipovska, A.2
-
94
-
-
84867580040
-
MRPS27 is a pentatricopeptide repeat domain protein required for the translation of mitochondrially encoded proteins
-
Davies SM, Lopez Sanchez MI, Narsai R et al (2012) MRPS27 is a pentatricopeptide repeat domain protein required for the translation of mitochondrially encoded proteins. FEBS Lett 586:3555–3561.
-
(2012)
FEBS Lett
, vol.586
, pp. 3555-3561
-
-
Davies, S.M.1
Lopez Sanchez, M.I.2
Narsai, R.3
-
95
-
-
84867571779
-
The human mitochondrial transcriptome and the RNA-binding proteins that regulate its expression
-
Rackham O, Mercer TR, Filipovska A (2012) The human mitochondrial transcriptome and the RNA-binding proteins that regulate its expression. Wiley Interdiscip Rev RNA 3: 675–695.
-
(2012)
Wiley Interdiscip Rev RNA
, vol.3
, pp. 675-695
-
-
Rackham, O.1
Mercer, T.R.2
Filipovska, A.3
-
96
-
-
77953529585
-
A compendium of human mitochondrial gene expression machinery with links to disease
-
Shutt TE, Shadel GS (2010) A compendium of human mitochondrial gene expression machinery with links to disease. Environ Mol Mutagen 51:360–379.
-
(2010)
Environ Mol Mutagen
, vol.51
, pp. 360-379
-
-
Shutt, T.E.1
Shadel, G.S.2
-
97
-
-
74549114163
-
Hungry codons promote frameshifting in human mitochondrial ribosomes
-
Temperley R, Richter R, Dennerlein S et al (2010) Hungry codons promote frameshifting in human mitochondrial ribosomes. Science 327:301.
-
(2010)
Science
, vol.327
, pp. 301
-
-
Temperley, R.1
Richter, R.2
Dennerlein, S.3
-
98
-
-
84864319440
-
Mechanism of protein biosynthesis in mammalian mitochondria
-
Christian BE, Spremulli LL (2012) Mechanism of protein biosynthesis in mammalian mitochondria. Biochim Biophys Acta 1819:1035–1054.
-
(2012)
Biochim Biophys Acta
, vol.1819
, pp. 1035-1054
-
-
Christian, B.E.1
Spremulli, L.L.2
-
99
-
-
77749325035
-
RET1- catalyzed uridylylation shapes the mitochondrial transcriptome in Trypanosoma brucei
-
Aphasizheva I, Aphasizhev R (2010) RET1- catalyzed uridylylation shapes the mitochondrial transcriptome in Trypanosoma brucei. Mol Cell Biol 30:1555–1567.
-
(2010)
Mol Cell Biol
, vol.30
, pp. 1555-1567
-
-
Aphasizheva, I.1
Aphasizhev, R.2
-
100
-
-
80955177475
-
Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3′-end maturation and intron degradation
-
Germain A, Herlich S, Larom S et al (2011) Mutational analysis of Arabidopsis chloroplast polynucleotide phosphorylase reveals roles for both RNase PH core domains in polyadenylation, RNA 3′-end maturation and intron degradation. Plant J 67:381–394.
-
(2011)
Plant J
, vol.67
, pp. 381-394
-
-
Germain, A.1
Herlich, S.2
Larom, S.3
-
101
-
-
0034072252
-
Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli
-
Mohanty BK, Kushner SR (2000) Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli. Mol Microbiol 36:982–994.
-
(2000)
Mol Microbiol
, vol.36
, pp. 982-994
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
102
-
-
0036549769
-
The Escherichia coli RNA degradosome: Structure, function and relationship in other ribonucleolytic multienzyme complexes
-
Carpousis AJ (2002) The Escherichia coli RNA degradosome: structure, function and relationship in other ribonucleolytic multienzyme complexes. Biochem Soc Trans 30: 150–155.
-
(2002)
Biochem Soc Trans
, vol.30
, pp. 150-155
-
-
Carpousis, A.J.1
-
103
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase
-
Carpousis AJ (2007) The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu Rev Microbiol 61:71–87.
-
(2007)
E. Annu Rev Microbiol
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
104
-
-
79955713801
-
Swapping the domains of exoribonucleases RNase II and RNase R: Conferring upon RNase II the ability to degrade ds RNA
-
Matos RG, Barbas A, Gomez-Puertas P et al (2011) Swapping the domains of exoribonucleases RNase II and RNase R: conferring upon RNase II the ability to degrade ds RNA. Proteins 79:1853–1867.
-
(2011)
Proteins
, vol.79
, pp. 1853-1867
-
-
Matos, R.G.1
Barbas, A.2
Gomez-Puertas, P.3
-
106
-
-
84875307449
-
Human mitochondrial RNA decay mediated by PNPase-hSuv3 complex takes place in distinct foci
-
Borowski LS, Dziembowski A, Hejnowicz MS et al (2013) Human mitochondrial RNA decay mediated by PNPase-hSuv3 complex takes place in distinct foci. Nucleic Acids Res 41:1223–1240.
-
(2013)
Nucleic Acids Res
, vol.41
, pp. 1223-1240
-
-
Borowski, L.S.1
Dziembowski, A.2
Hejnowicz, M.S.3
-
107
-
-
67849130819
-
A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis
-
Baughman JM, Nilsson R, Gohil VM et al (2009) A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis. PLoS Genet 5:e1000590.
-
(2009)
Plos Genet
, vol.5
-
-
Baughman, J.M.1
Nilsson, R.2
Gohil, V.M.3
-
108
-
-
77950901962
-
LRPPRC and SLIRP interact in a ribonucleoprotein complex that regulates posttranscriptional gene expression in mitochondria
-
Sasarman F, Brunel-Guitton C, Antonicka H et al (2010) LRPPRC and SLIRP interact in a ribonucleoprotein complex that regulates posttranscriptional gene expression in mitochondria. Mol Biol Cell 21:1315–1323.
-
(2010)
Mol Biol Cell
, vol.21
, pp. 1315-1323
-
-
Sasarman, F.1
Brunel-Guitton, C.2
Antonicka, H.3
-
109
-
-
67650269376
-
Evidence for a degradosome-like complex in the mitochondria of Trypanosoma brucei
-
Mattiacio JL, Read LK (2009) Evidence for a degradosome-like complex in the mitochondria of Trypanosoma brucei. FEBS Lett 583:2333–2338.
-
(2009)
FEBS Lett
, vol.583
, pp. 2333-2338
-
-
Mattiacio, J.L.1
Read, L.K.2
-
111
-
-
0031007946
-
The spinach chloroplast endoribonuclease CSP41 cleaves the 3′-untranslated region of petD mRNA primarily within its terminal stem-loop structure
-
Yang J, Stern DB (1997) The spinach chloroplast endoribonuclease CSP41 cleaves the 3′-untranslated region of petD mRNA primarily within its terminal stem-loop structure. J Biol Chem 272:12874–12880.
-
(1997)
J Biol Chem
, vol.272
, pp. 12874-12880
-
-
Yang, J.1
Stern, D.B.2
-
112
-
-
0043163808
-
Divalent metal-dependent catalysis and cleavage specificity of CSP41, a chloroplast endoribonuclease belonging to the short chain dehydrogenase/reductase superfamily
-
Bollenbach TJ, Stern DB (2003) Divalent metal-dependent catalysis and cleavage specificity of CSP41, a chloroplast endoribonuclease belonging to the short chain dehydrogenase/reductase superfamily. Nucleic Acids Res 31:4317–4325.
-
(2003)
Nucleic Acids Res
, vol.31
, pp. 4317-4325
-
-
Bollenbach, T.J.1
Stern, D.B.2
-
113
-
-
0345580792
-
Polyadenylation occurs at multiple sites in maize mitochondrial cox2 mRNA and is independent of editing status
-
Lupold DS, Caoile AG, Stern DB (1999) Polyadenylation occurs at multiple sites in maize mitochondrial cox2 mRNA and is independent of editing status. Plant Cell 11: 1565–1578.
-
(1999)
Plant Cell
, vol.11
, pp. 1565-1578
-
-
Lupold, D.S.1
Caoile, A.G.2
Stern, D.B.3
-
114
-
-
0035941259
-
Plant mitochondrial polyadenylated mRNAs are degraded by a 3′- to 5′-exoribonuclease activity, which proceeds unimpeded by stable secondary structures
-
Gagliardi D, Perrin R, Marechal-Drouard L et al (2001) Plant mitochondrial polyadenylated mRNAs are degraded by a 3′- to 5′-exoribonuclease activity, which proceeds unimpeded by stable secondary structures. J Biol Chem 276:43541–43547.
-
(2001)
J Biol Chem
, vol.276
, pp. 43541-43547
-
-
Gagliardi, D.1
Perrin, R.2
Marechal-Drouard, L.3
-
115
-
-
41549094036
-
Polyadenylation in mammalian mitochondria: Insights from recent studies
-
Nagaike T, Suzuki T, Ueda T (2008) Polyadenylation in mammalian mitochondria: insights from recent studies. Biochim Biophys Acta 1779:266–269.
-
(2008)
Biochim Biophys Acta
, vol.1779
, pp. 266-269
-
-
Nagaike, T.1
Suzuki, T.2
Ueda, T.3
-
116
-
-
33645213506
-
Differential stability of mitochondrial mRNA in HeLa cells
-
Piechota J, Tomecki R, Gewartowski K et al (2006) Differential stability of mitochondrial mRNA in HeLa cells. Acta Biochim Pol 53: 157–168.
-
(2006)
Acta Biochim Pol
, vol.53
, pp. 157-168
-
-
Piechota, J.1
Tomecki, R.2
Gewartowski, K.3
-
118
-
-
22544448652
-
Polyadenylation and degradation of human mitochondrial RNA: The prokaryotic past leaves its mark
-
Slomovic S, Laufer D, Geiger D et al (2005) Polyadenylation and degradation of human mitochondrial RNA: the prokaryotic past leaves its mark. Mol Cell Biol 25:6427–6435.
-
(2005)
Mol Cell Biol
, vol.25
, pp. 6427-6435
-
-
Slomovic, S.1
Laufer, D.2
Geiger, D.3
-
119
-
-
33745116597
-
Polyadenylation of ribosomal RNA in human cells
-
Slomovic S, Laufer D, Geiger D et al (2006) Polyadenylation of ribosomal RNA in human cells. Nucleic Acids Res 34:2966–2975.
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 2966-2975
-
-
Slomovic, S.1
Laufer, D.2
Geiger, D.3
|