-
1
-
-
0037972522
-
Mitochondrial respiratory-chain diseases
-
DiMauro S, Schon EA (2003) Mitochondrial respiratory-chain diseases. N Engl J Med 348: 2656-2668.
-
(2003)
N Engl J Med
, vol.348
, pp. 2656-2668
-
-
DiMauro, S.1
Schon, E.A.2
-
2
-
-
70149101621
-
Clinical and molecular features of mitochondrial DNA depletion syndromes
-
Spinazzola A, Invernizzi F, Carrara F, Lamantea E, Donati A, et al. (2008) Clinical and molecular features of mitochondrial DNA depletion syndromes. J Inherit Metab Dis.
-
(2008)
J Inherit Metab Dis
-
-
Spinazzola, A.1
Invernizzi, F.2
Carrara, F.3
Lamantea, E.4
Donati, A.5
-
3
-
-
33845744837
-
Initiation and beyond: Multiple functions of the human mitochondrial transcription machinery
-
Bonawitz ND, Clayton DA, Shadel GS (2006) Initiation and beyond: multiple functions of the human mitochondrial transcription machinery. Mol Cell 24: 813-825.
-
(2006)
Mol Cell
, vol.24
, pp. 813-825
-
-
Bonawitz, N.D.1
Clayton, D.A.2
Shadel, G.S.3
-
4
-
-
56349124605
-
Assembly of the oxidative phosphorylation system in humans: What we have learned by studying its defects
-
Fernandez-Vizarra E, Tiranti V, Zeviani M (2009) Assembly of the oxidative phosphorylation system in humans: what we have learned by studying its defects. Biochim Biophys Acta 1793: 200-211.
-
(2009)
Biochim Biophys Acta
, vol.1793
, pp. 200-211
-
-
Fernandez-Vizarra, E.1
Tiranti, V.2
Zeviani, M.3
-
5
-
-
9644266773
-
Biochemical and molecular diagnosis of mitochondrial respiratory chain disorders
-
DOI 10.1016/j.bbabio.2004.08.006, PII S0005272804002439, Euromit 6
-
Thorburn DR, Sugiana C, Salemi R, Kirby DM, Worgan L, et al. (2004) Biochemical and molecular diagnosis of mitochondrial respiratory chain disorders. Biochim Biophys Acta 1659: 121-128. (Pubitemid 39575498)
-
(2004)
Biochimica et Biophysica Acta - Bioenergetics
, vol.1659
, Issue.2-3
, pp. 121-128
-
-
Thorburn, D.R.1
Sugiana, C.2
Salemi, R.3
Kirby, D.M.4
Worgan, L.5
Ohtake, A.6
Ryan, M.T.7
-
6
-
-
58149328514
-
Batteries not included: Diagnosis and management of mitochondrial disease
-
McFarland R, Turnbull DM (2009) Batteries not included: diagnosis and management of mitochondrial disease. J Intern Med 265: 210-228.
-
(2009)
J Intern Med
, vol.265
, pp. 210-228
-
-
McFarland, R.1
Turnbull, D.M.2
-
7
-
-
31644440530
-
Mutation detection in four candidate genes (OXA1L, MRS2L, YME1L and MIPEP) for combined deficiencies in the oxidative phosphorylation system
-
DOI 10.1007/s10545-005-4483-y
-
Coenen MJ, Smeitink JA, Smeets R, Trijbels FJ, van den Heuvel LP (2005) Mutation detection in four candidate genes (OXA1L, MRS2L, YME1L and MIPEP) for combined deficiencies in the oxidative phosphorylation system. J Inherit Metab Dis 28: 1091-1097. (Pubitemid 43168946)
-
(2005)
Journal of Inherited Metabolic Disease
, vol.28
, Issue.6
, pp. 1091-1097
-
-
Coenen, M.J.H.1
Smeitink, J.A.M.2
Smeets, R.3
Trijbels, F.J.M.4
Van Den Heuvel, L.P.5
-
8
-
-
84899128183
-
Sequence variants in four candidate genes (NIPSNAP1, GBAS, CHCHD1 and METT11D1) in patients with combined oxidative phosphorylation system deficiencies
-
Smits P, Rodenburg RJ, Smeitink JA, van den Heuvel LP (2009) Sequence variants in four candidate genes (NIPSNAP1, GBAS, CHCHD1 and METT11D1) in patients with combined oxidative phosphorylation system deficiencies. J Inherit Metab Dis.
-
(2009)
J Inherit Metab Dis
-
-
Smits, P.1
Rodenburg, R.J.2
Smeitink, J.A.3
Van Den Heuvel, L.P.4
-
9
-
-
0038054341
-
PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes
-
DOI 10.1038/ng1180
-
Mootha VK, Lindgren CM, Eriksson KF, Subramanian A, Sihag S, et al. (2003) PGC-1alpha-responsive genes involved in oxidative phosphorylation are coordinately downregulated in human diabetes. Nat Genet 34: 267-273. (Pubitemid 36792858)
-
(2003)
Nature Genetics
, vol.34
, Issue.3
, pp. 267-273
-
-
Mootha, V.K.1
Lindgren, C.M.2
Eriksson, K.-F.3
Subramanian, A.4
Sihag, S.5
Lehar, J.6
Puigserver, P.7
Carlsson, E.8
Ridderstrale, M.9
Laurila, E.10
Houstis, N.11
Daly, M.J.12
Patterson, N.13
Mesirov, J.P.14
Golub, T.R.15
Tamayo, P.16
Spiegelman, B.17
Lander, E.S.18
Hirschhorn, J.N.19
Altshuler, D.20
Groop, L.C.21
more..
-
10
-
-
41049093073
-
Transcriptional co-expression and coregulation of genes coding for components of the oxidative phosphorylation system
-
van Waveren C, Moraes CT (2008) Transcriptional co-expression and coregulation of genes coding for components of the oxidative phosphorylation system. BMC Genomics 9: 18.
-
(2008)
BMC Genomics
, vol.9
, pp. 18
-
-
Van Waveren, C.1
Moraes, C.T.2
-
11
-
-
0037458031
-
Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics
-
DOI 10.1073/pnas.242716699
-
Mootha VK, Lepage P, Miller K, Bunkenborg J, Reich M, et al. (2003) Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics. Proc Natl Acad Sci U S A 100: 605-610. (Pubitemid 36126099)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.2
, pp. 605-610
-
-
Mootha, V.K.1
Lepage, P.2
Miller, K.3
Bunkenborg, J.4
Reich, M.5
Hjerrild, M.6
Delmonte, T.7
Villeneuve, A.8
Sladek, R.9
Xu, F.10
Mitchell, G.A.11
Morin, C.12
Mann, M.13
Hudson, T.J.14
Robinson, B.15
Rioux, J.D.16
Lander, E.S.17
-
12
-
-
0035956926
-
Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays
-
DOI 10.1073/pnas.041605498
-
Miki R, Kadota K, Bono H, Mizuno Y, Tomaru Y, et al. (2001) Delineating developmental and metabolic pathways in vivo by expression profiling using the RIKEN set of 18,816 full-length enriched mouse cDNA arrays. Proc Natl Acad Sci U S A 98: 2199-2204. (Pubitemid 32209459)
-
(2001)
Proceedings of the National Academy of Sciences of the United States of America
, vol.98
, Issue.5
, pp. 2199-2204
-
-
Miki, R.1
Kadota, K.2
Bono, H.3
Mizuno, Y.4
Tomaru, Y.5
Carninci, P.6
Itoh, M.7
Shibata, K.8
Kawai, J.9
Konno, H.10
Watanabe, S.11
Sato, K.12
Tokusumi, Y.13
Kikuchi, N.14
Ishii, Y.15
Hamaguchi, Y.16
Nishizuka, I.17
Goto, H.18
Nitanda, H.19
Satomi, S.20
Yoshiki, A.21
Kusakabe, M.22
Derisi, J.L.23
Eisen, M.B.24
Iyer, V.R.25
Brown, P.O.26
Muramatsu, M.27
Shimada, H.28
Okazaki, Y.29
Hayashizaki, Y.30
more..
-
13
-
-
0037007048
-
Large-scale analysis of the human and mouse transcriptomes
-
DOI 10.1073/pnas.012025199
-
Su AI, Cooke MP, Ching KA, Hakak Y, Walker JR, et al. (2002) Large-scale analysis of the human and mouse transcriptomes. Proc Natl Acad Sci U S A 99: 4465-4470. (Pubitemid 34286008)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.7
, pp. 4465-4470
-
-
Su, A.I.1
Cooke, M.P.2
Ching, K.A.3
Hakak, Y.4
Walker, J.R.5
Wiltshire, T.6
Orth, A.P.7
Vega, R.G.8
Sapinoso, L.M.9
Moqrich, A.10
Patapoutian, A.11
Hampton, G.M.12
Schultz, P.G.13
Hogenesch, J.B.14
-
14
-
-
34548499539
-
Meta-analysis of microarray results: Challenges, opportunities, and recommendations for standardization
-
Cahan P, Rovegno F, Mooney D, Newman JC, St Laurent G 3rd, et al. (2007) Meta-analysis of microarray results: challenges, opportunities, and recommendations for standardization. Gene 401: 12-18.
-
(2007)
Gene
, vol.401
, pp. 12-18
-
-
Cahan, P.1
Rovegno, F.2
Mooney, D.3
Newman, J.C.4
St Laurent III, G.5
-
15
-
-
35748950713
-
Exploring the functional landscape of gene expression: Directed search of large microarray compendia
-
DOI 10.1093/bioinformatics/btm403
-
Hibbs MA, Hess DC, Myers CL, Huttenhower C, Li K, et al. (2007) Exploring the functional landscape of gene expression: directed search of large microarray compendia. Bioinformatics 23: 2692-2699. (Pubitemid 350048333)
-
(2007)
Bioinformatics
, vol.23
, Issue.20
, pp. 2692-2699
-
-
Hibbs, M.A.1
Hess, D.C.2
Myers, C.L.3
Huttenhower, C.4
Li, K.5
Troyanskaya, O.G.6
-
16
-
-
33751359281
-
A scalable method for integration and functional analysis of multiple microarray datasets
-
DOI 10.1093/bioinformatics/btl492
-
Huttenhower C, Hibbs M, Myers C, Troyanskaya OG (2006) A scalable method for integration and functional analysis of multiple microarray datasets. Bioinformatics 22: 2890-2897. (Pubitemid 44811560)
-
(2006)
Bioinformatics
, vol.22
, Issue.23
, pp. 2890-2897
-
-
Huttenhower, C.1
Hibbs, M.2
Myers, C.3
Troyanskaya, O.G.4
-
17
-
-
63449085311
-
Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis
-
doi:10.1371/journal.pgen. 1000407
-
Hess DC, Myers CL, Huttenhower C, Hibbs MA, Hayes AP, et al. (2009) Computationally driven, quantitative experiments discover genes required for mitochondrial biogenesis. PLoS Genet 5: e1000407. doi:10.1371/journal.pgen. 1000407.
-
(2009)
PLoS Genet
, vol.5
-
-
Hess, D.C.1
Myers, C.L.2
Huttenhower, C.3
Hibbs, M.A.4
Hayes, A.P.5
-
18
-
-
33846064113
-
NCBI GEO: Mining tens of millions of expression profiles - Database and tools update
-
DOI 10.1093/nar/gkl887
-
Barrett T, Troup DB, Wilhite SE, Ledoux P, Rudnev D, et al. (2007) NCBI GEO: mining tens of millions of expression profiles-database and tools update. Nucleic Acids Res 35: D760-765. (Pubitemid 46056306)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Barrett, T.1
Troup, D.B.2
Wilhite, S.E.3
Ledoux, P.4
Rudnev, D.5
Evangelista, C.6
Kim, I.F.7
Soboleva, A.8
Tomashevsky, M.9
Edgar, R.10
-
19
-
-
66449120271
-
Exploring the human genome with functional maps
-
Huttenhower C, Haley EM, Hibbs MA, Dumeaux V, Barrett DR, et al. (2009) Exploring the human genome with functional maps. Genome Res.
-
(2009)
Genome Res
-
-
Huttenhower, C.1
Haley, E.M.2
Hibbs, M.A.3
Dumeaux, V.4
Barrett, D.R.5
-
20
-
-
33751574953
-
Bovine complex I is a complex of 45 different subunits
-
Carroll J, Fearnley IM, Skehel JM, Shannon RJ, Hirst J, et al. (2006) Bovine complex I is a complex of 45 different subunits. J Biol Chem 281: 32724-32727.
-
(2006)
J Biol Chem
, vol.281
, pp. 32724-32727
-
-
Carroll, J.1
Fearnley, I.M.2
Skehel, J.M.3
Shannon, R.J.4
Hirst, J.5
-
21
-
-
14244259670
-
Clinical Spectrum, Morbidity, and Mortality in 113 Pediatric Patients with Mitochondrial Disease
-
DOI 10.1542/peds.2004-0718
-
Scaglia F, Towbin JA, Craigen WJ, Belmont JW, Smith EO, et al. (2004) Clinical spectrum, morbidity, and mortality in 113 pediatric patients with mitochondrial disease. Pediatrics 114: 925-931. (Pubitemid 41529754)
-
(2004)
Pediatrics
, vol.114
, Issue.4
, pp. 925-931
-
-
Scaglia, F.1
Towbin, J.A.2
Craigen, W.J.3
Belmont, J.W.4
Smith, E.O.5
Neish, S.R.6
Ware, S.M.7
Hunter, J.V.8
Fernbach, S.D.9
Vladutiu, G.D.10
Wong, L.-J.C.11
Vogel, H.12
-
22
-
-
33746878763
-
Mitochondrial complex I: Structure, function and pathology
-
DOI 10.1007/s10545-006-0362-4
-
Janssen RJ, Nijtmans LG, van den Heuvel LP, Smeitink JA (2006) Mitochondrial complex I: structure, function and pathology. J Inherit Metab Dis 29: 499-515. (Pubitemid 44193264)
-
(2006)
Journal of Inherited Metabolic Disease
, vol.29
, Issue.4
, pp. 499-515
-
-
Janssen, R.J.R.J.1
Nijtmans, L.G.2
Van Den Heuvel, L.P.3
Smeitink, J.A.M.4
-
23
-
-
0032076536
-
Linear mitochondrial genomes: 30 years down the line
-
DOI 10.1016/S0168-9525(98)01443-7
-
Nosek J, Tomaska L, Fukuhara H, Suyama Y, Kovac L (1998) Linear mitochondrial genomes: 30 years down the line. Trends Genet 14: 184-188. (Pubitemid 28244242)
-
(1998)
Trends in Genetics
, vol.14
, Issue.5
, pp. 184-188
-
-
Nosek, J.1
Tomaska, L.2
Fukuhara, H.3
Suyama, Y.4
Kovac, L.5
-
24
-
-
41549094036
-
Polyadenylation in mammalian mitochondria: Insights from recent studies
-
Nagaike T, Suzuki T, Ueda T (2008) Polyadenylation in mammalian mitochondria: insights from recent studies. Biochim Biophys Acta 1779: 266-269.
-
(2008)
Biochim Biophys Acta
, vol.1779
, pp. 266-269
-
-
Nagaike, T.1
Suzuki, T.2
Ueda, T.3
-
25
-
-
0005301078
-
Modeling expert judgements for Bayesian updating
-
Genest C, Schervish MJ (1985) Modeling expert judgements for Bayesian updating. The Annals of Statistics 13: 1198-1212.
-
(1985)
The Annals of Statistics
, vol.13
, pp. 1198-1212
-
-
Genest, C.1
Schervish, M.J.2
-
27
-
-
18244384210
-
Multiplelaboratory comparison of microarray platforms
-
Irizarry RA, Warren D, Spencer F, Kim IF, Biswal S, et al. (2005) Multiplelaboratory comparison of microarray platforms. Nat Methods 2: 345-350.
-
(2005)
Nat Methods
, vol.2
, pp. 345-350
-
-
Irizarry, R.A.1
Warren, D.2
Spencer, F.3
Kim, I.F.4
Biswal, S.5
-
28
-
-
27644528185
-
Cross-platform comparability of microarray technology: Intra-platform consistency and appropriate data analysis procedures are essential
-
DOI 10.1186/1471-2105-6-S2-S12
-
Shi L, Tong W, Fang H, Scherf U, Han J, et al. (2005) Cross-platform comparability of microarray technology: intra-platform consistency and appropriate data analysis procedures are essential. BMC Bioinformatics 6 Suppl 2: S12. (Pubitemid 41574315)
-
(2005)
BMC Bioinformatics
, vol.6
, Issue.SUPPL. 2
-
-
Shi, L.1
Tong, W.2
Fang, H.3
Scherf, U.4
Han, J.5
Puri, R.K.6
Frueh, F.W.7
Goodsaid, F.M.8
Guo, L.9
Su, Z.10
Han, T.11
Fuscoe, J.C.12
Xu, Z.A.13
Patterson, T.A.14
Hong, H.15
Xie, Q.16
Perkins, R.G.17
Chen, J.J.18
Casciano, D.A.19
-
29
-
-
0025120211
-
Regulation of the mevalonate pathway
-
Goldstein JL, Brown MS (1990) Regulation of the mevalonate pathway. Nature 343: 425-430.
-
(1990)
Nature
, vol.343
, pp. 425-430
-
-
Goldstein, J.L.1
Brown, M.S.2
-
30
-
-
42049114034
-
Transcriptional paradigms in mammalian mitochondrial biogenesis and function
-
Scarpulla RC (2008) Transcriptional paradigms in mammalian mitochondrial biogenesis and function. Physiol Rev 88: 611-638.
-
(2008)
Physiol Rev
, vol.88
, pp. 611-638
-
-
Scarpulla, R.C.1
-
31
-
-
33646362551
-
Systematic identification of human mitochondrial disease genes through integrative genomics
-
Calvo S, Jain M, Xie X, Sheth SA, Chang B, et al. (2006) Systematic identification of human mitochondrial disease genes through integrative genomics. Nat Genet 38: 576-582.
-
(2006)
Nat Genet
, vol.38
, pp. 576-582
-
-
Calvo, S.1
Jain, M.2
Xie, X.3
Sheth, S.A.4
Chang, B.5
-
32
-
-
34250664641
-
Pyruvate induces mitochondrial biogenesis by a PGC-1 alpha-independent mechanism
-
DOI 10.1152/ajpcell.00428.2006
-
Wilson L, Yang Q, Szustakowski JD, Gullicksen PS, Halse R (2007) Pyruvate induces mitochondrial biogenesis by a PGC-1 alpha-independent mechanism. Am J Physiol Cell Physiol 292: C1599-1605. (Pubitemid 47080574)
-
(2007)
American Journal of Physiology - Cell Physiology
, vol.292
, Issue.5
-
-
Wilson, L.1
Yang, Q.2
Szustakowski, J.D.3
Gullicksen, P.S.4
Halse, R.5
-
33
-
-
17544380551
-
The architecture of mammalian ribosomal protein promoters
-
Perry RP (2005) The architecture of mammalian ribosomal protein promoters. BMC Evol Biol 5: 15.
-
(2005)
BMC Evol Biol
, vol.5
, pp. 15
-
-
Perry, R.P.1
-
34
-
-
33645229675
-
GABP complex regulates transcription of eIF6 (p27BBP), an essential transacting factor in ribosome biogenesis
-
Donadini A, Giacopelli F, Ravazzolo R, Gandin V, Marchisio PC, et al. (2006) GABP complex regulates transcription of eIF6 (p27BBP), an essential transacting factor in ribosome biogenesis. FEBS Lett 580: 1983-1987.
-
(2006)
FEBS Lett
, vol.580
, pp. 1983-1987
-
-
Donadini, A.1
Giacopelli, F.2
Ravazzolo, R.3
Gandin, V.4
Marchisio, P.C.5
-
35
-
-
46349103594
-
A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology
-
DOI 10.1016/j.cell.2008.06.016, PII S009286740800768X
-
Pagliarini DJ, Calvo SE, Chang B, Sheth SA, Vafai SB, et al. (2008) A mitochondrial protein compendium elucidates complex I disease biology. Cell 134: 112-123. (Pubitemid 351916708)
-
(2008)
Cell
, vol.134
, Issue.1
, pp. 112-123
-
-
Pagliarini, D.J.1
Calvo, S.E.2
Chang, B.3
Sheth, S.A.4
Vafai, S.B.5
Ong, S.-E.6
Walford, G.A.7
Sugiana, C.8
Boneh, A.9
Chen, W.K.10
Hill, D.E.11
Vidal, M.12
Evans, J.G.13
Thorburn, D.R.14
Carr, S.A.15
Mootha, V.K.16
-
36
-
-
0030586910
-
Cloning, mapping, and in vivo localization of a human member of the PKCI-1 protein family (PRKCNH1)
-
DOI 10.1006/geno.1996.0435
-
Brzoska PM, Chen H, Levin NA, Kuo WL, Collins C, et al. (1996) Cloning, mapping, and in vivo localization of a human member of the PKCI-1 protein family (PRKCNH1). Genomics 36: 151-156. (Pubitemid 26277768)
-
(1996)
Genomics
, vol.36
, Issue.1
, pp. 151-156
-
-
Brzoska, P.M.1
Chen, H.2
Levin, N.A.3
Kuo, W.-L.4
Collins, C.5
Fu, K.K.6
Gray, J.W.7
Christman, M.F.8
-
38
-
-
35649011448
-
Identification of two proteins associated with mammalian ATP synthase
-
DOI 10.1074/mcp.M700097-MCP200
-
Meyer B, Wittig I, Trifilieff E, Karas M, Schagger H (2007) Identification of two proteins associated with mammalian ATP synthase. Mol Cell Proteomics 6: 1690-1699. (Pubitemid 350031671)
-
(2007)
Molecular and Cellular Proteomics
, vol.6
, Issue.10
, pp. 1690-1699
-
-
Meyer, B.1
Wittig, I.2
Trifilieff, E.3
Karas, M.4
Schagger, H.5
-
39
-
-
34250886311
-
Association of two proteolipids of unknown function with ATP synthase from bovine heart mitochondria
-
DOI 10.1016/j.febslet.2007.05.079, PII S001457930700631X
-
Chen R, Runswick MJ, Carroll J, Fearnley IM, Walker JE (2007) Association of two proteolipids of unknown function with ATP synthase from bovine heart mitochondria. FEBS Lett 581: 3145-3148. (Pubitemid 46977353)
-
(2007)
FEBS Letters
, vol.581
, Issue.17
, pp. 3145-3148
-
-
Chen, R.1
Runswick, M.J.2
Carroll, J.3
Fearnley, I.M.4
Walker, J.E.5
-
40
-
-
70149122891
-
Isolated deficiencies of OXPHOS complexes I and IV are identified accurately and quickly by simple enzyme activity immunocapture assays
-
Willis JH, Capaldi RA, Huigsloot M, Rodenburg RJ, Smeitink J, et al. (2008) Isolated deficiencies of OXPHOS complexes I and IV are identified accurately and quickly by simple enzyme activity immunocapture assays. Biochim Biophys Acta.
-
(2008)
Biochim Biophys Acta
-
-
Willis, J.H.1
Capaldi, R.A.2
Huigsloot, M.3
Rodenburg, R.J.4
Smeitink, J.5
-
41
-
-
33744541544
-
SLIRP, a small SRA binding protein, is a nuclear receptor corepressor
-
Hatchell EC, Colley SM, Beveridge DJ, Epis MR, Stuart LM, et al. (2006) SLIRP, a small SRA binding protein, is a nuclear receptor corepressor. Mol Cell 22: 657-668.
-
(2006)
Mol Cell
, vol.22
, pp. 657-668
-
-
Hatchell, E.C.1
Colley, S.M.2
Beveridge, D.J.3
Epis, M.R.4
Stuart, L.M.5
-
42
-
-
21244454028
-
Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase
-
DOI 10.1074/jbc.M500804200
-
Nagaike T, Suzuki T, Katoh T, Ueda T (2005) Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase. J Biol Chem 280: 19721-19727. (Pubitemid 41379497)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.20
, pp. 19721-19727
-
-
Nagaike, T.1
Suzuki, T.2
Katoh, T.3
Ueda, T.4
-
43
-
-
0024448458
-
Human cells lacking mtDNA: Repopulation with exogenous mitochondria by complementation
-
King MP, Attardi G (1989) Human cells lacking mtDNA: repopulation with exogenous mitochondria by complementation. Science 246: 500-503.
-
(1989)
Science
, vol.246
, pp. 500-503
-
-
King, M.P.1
Attardi, G.2
-
44
-
-
0036566855
-
Modulation of mitochondrial transcription in response to mtDNA depletion and repletion in HeLa cells
-
Seidel-Rogol BL, Shadel GS (2002) Modulation of mitochondrial transcription in response to mtDNA depletion and repletion in HeLa cells. Nucleic Acids Res 30: 1929-1934.
-
(2002)
Nucleic Acids Res
, vol.30
, pp. 1929-1934
-
-
Seidel-Rogol, B.L.1
Shadel, G.S.2
-
45
-
-
4344595430
-
The role of the LRPPRC (leucine-rich pentatricopeptide repeal cassette) gene in cytochrome oxidase assembly: Mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA
-
DOI 10.1042/BJ20040469
-
Xu F, Morin C, Mitchell G, Ackerley C, Robinson BH (2004) The role of the LRPPRC (leucine-rich pentatricopeptide repeat cassette) gene in cytochrome oxidase assembly: mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA. Biochem J 382: 331-336. (Pubitemid 39141597)
-
(2004)
Biochemical Journal
, vol.382
, Issue.1
, pp. 331-336
-
-
Xu, F.1
Morin, C.2
Mitchell, G.3
Ackerley, C.4
Robinson, B.H.5
-
46
-
-
34249849560
-
Characterization of the cytochrome c oxidase assembly factor Cox19 of Saccharomyces cerevisiae
-
DOI 10.1074/jbc.M610082200
-
Rigby K, Zhang L, Cobine PA, George GN, Winge DR (2007) characterization of the cytochrome c oxidase assembly factor Cox19 of Saccharomyces cerevisiae. J Biol Chem 282: 10233-10242. (Pubitemid 47093419)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.14
, pp. 10233-10242
-
-
Rigby, K.1
Zhang, L.2
Cobine, P.A.3
George, G.N.4
Winge, D.R.5
-
47
-
-
26844566827
-
HCOX18 and hCOX19: Two human genes involved in cytochrome c oxidase assembly
-
DOI 10.1016/j.bbrc.2005.09.127, PII S0006291X05021340
-
Sacconi S, Trevisson E, Pistollato F, Baldoin MC, Rezzonico R, et al. (2005) hCOX18 and hCOX19: two human genes involved in cytochrome c oxidase assembly. Biochem Biophys Res Commun 337: 832-839. (Pubitemid 41446989)
-
(2005)
Biochemical and Biophysical Research Communications
, vol.337
, Issue.3
, pp. 832-839
-
-
Sacconi, S.1
Trevisson, E.2
Pistollato, F.3
Baldoin, M.C.4
Rezzonico, R.5
Bourget, I.6
Desnuelle, C.7
Tenconi, R.8
Basso, G.9
Dimauro, S.10
Salviati, L.11
-
48
-
-
55949128232
-
Emerging pathways in genetic Parkinson's disease: Autosomal-recessive genes in Parkinson's disease-a common pathway?
-
Fitzgerald JC, Plun-Favreau H (2008) Emerging pathways in genetic Parkinson's disease: autosomal-recessive genes in Parkinson's disease-a common pathway? Febs J 275: 5758-5766.
-
(2008)
Febs J
, vol.275
, pp. 5758-5766
-
-
Fitzgerald, J.C.1
Plun-Favreau, H.2
-
49
-
-
20144389422
-
Hypersensitivity of DJ-1-deficient mice to 1-methyl-4-phenyl-1,2,3,6- tetrahydropyrindine (MPTP) and oxidative stress
-
Kim RH, Smith PD, Aleyasin H, Hayley S, Mount MP, et al. (2005) Hypersensitivity of DJ-1-deficient mice to 1-methyl-4-phenyl-1,2,3,6- tetrahydropyrindine (MPTP) and oxidative stress. Proc Natl Acad Sci U S A 102: 5215-5220.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 5215-5220
-
-
Kim, R.H.1
Smith, P.D.2
Aleyasin, H.3
Hayley, S.4
Mount, M.P.5
-
50
-
-
44649174333
-
Mechanisms of DJ-1 neuroprotection in a cellular model of Parkinson's disease
-
DOI 10.1111/j.1471-4159.2008.05333.x
-
Liu F, Nguyen JL, Hulleman JD, Li L, Rochet JC (2008) Mechanisms of DJ-1 neuroprotection in a cellular model of Parkinson's disease. J Neurochem. (Pubitemid 351782273)
-
(2008)
Journal of Neurochemistry
, vol.105
, Issue.6
, pp. 2435-2453
-
-
Liu, F.1
Nguyen, J.L.2
Hulleman, J.D.3
Li, L.4
Rochet, J.-C.5
-
51
-
-
0028011017
-
Activation of the human mitochondrial transcription factor a gene by nuclear respiratory factors: A potential regulatory link between nuclear and mitochondrial gene expression in organelle biogenesis
-
Virbasius JV, Scarpulla RC (1994) Activation of the human mitochondrial transcription factor A gene by nuclear respiratory factors: a potential regulatory link between nuclear and mitochondrial gene expression in organelle biogenesis. Proc Natl Acad Sci U S A 91: 1309-1313.
-
(1994)
Proc Natl Acad Sci U S A
, vol.91
, pp. 1309-1313
-
-
Virbasius, J.V.1
Scarpulla, R.C.2
-
52
-
-
13444306450
-
Control of mitochondrial transcription specificity factors (TFB1M and TFB2M) by nuclear respiratory factors (NRF-1 and NRF-2) and PGC-1 family coactivators
-
DOI 10.1128/MCB.25.4.1354-1366.2005
-
Gleyzer N, Vercauteren K, Scarpulla RC (2005) Control of mitochondrial transcription specificity factors (TFB1M and TFB2M) by nuclear respiratory factors (NRF-1 and NRF-2) and PGC-1 family coactivators. Mol Cell Biol 25: 1354-1366. (Pubitemid 40204913)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.4
, pp. 1354-1366
-
-
Gleyzer, N.1
Vercauteren, K.2
Scarpulla, R.C.3
-
53
-
-
11344287222
-
Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase
-
DOI 10.1093/nar/gkh923
-
Tomecki R, Dmochowska A, Gewartowski K, Dziembowski A, Stepien PP (2004) Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase. Nucleic Acids Res 32: 6001-6014. (Pubitemid 40073995)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.20
, pp. 6001-6014
-
-
Tomecki, R.1
Dmochowska, A.2
Gewartowski, K.3
Dziembowski, A.4
Stepien, P.P.5
-
54
-
-
0021365976
-
Assembly of the mitochondrial membrane system. CBP1, a yeast nuclear gene involved in 5' end processing of cytochrome b pre-mRNA
-
Dieckmann CL, Koerner TJ, Tzagoloff A (1984) Assembly of the mitochondrial membrane system. CBP1, a yeast nuclear gene involved in 59 end processing of cytochrome b pre-mRNA. J Biol Chem 259: 4722-4731. (Pubitemid 14144192)
-
(1984)
Journal of Biological Chemistry
, vol.259
, Issue.8
, pp. 4722-4731
-
-
Dieckmann, C.L.1
Koerner, T.J.2
Tzagoloff, A.3
-
55
-
-
1942533644
-
+-translocating ATP Synthase of Saccharomyces cerevisiae
-
DOI 10.1074/jbc.M314162200
-
Ellis TP, Helfenbein KG, Tzagoloff A, Dieckmann CL (2004) Aep3p stabilizes the mitochondrial bicistronic mRNA encoding subunits 6 and 8 of the H+- translocating ATP synthase of Saccharomyces cerevisiae. J Biol Chem 279: 15728-15733. (Pubitemid 38509257)
-
(2004)
Journal of Biological Chemistry
, vol.279
, Issue.16
, pp. 15728-15733
-
-
Ellis, T.P.1
Helfenbein, K.G.2
Tzagoloff, A.3
Dieckmann, C.L.4
-
56
-
-
0028984035
-
The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of introncontaining RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae
-
Manthey GM, McEwen JE (1995) The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of introncontaining RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. Embo J 14: 4031-4043.
-
(1995)
Embo J
, vol.14
, pp. 4031-4043
-
-
Manthey, G.M.1
McEwen, J.E.2
-
57
-
-
56049093869
-
Disruption of a mitochondrial RNA-binding protein gene results in decreased cytochrome b expression and a marked reduction in ubiquinol-cytochrome c reductase activity in mouse heart mitochondria
-
Xu F, Ackerley C, Maj MC, Addis JB, Levandovskiy V, et al. (2008) Disruption of a mitochondrial RNA-binding protein gene results in decreased cytochrome b expression and a marked reduction in ubiquinol-cytochrome c reductase activity in mouse heart mitochondria. Biochem J 416: 15-26.
-
(2008)
Biochem J
, vol.416
, pp. 15-26
-
-
Xu, F.1
Ackerley, C.2
Maj, M.C.3
Addis, J.B.4
Levandovskiy, V.5
-
58
-
-
55249119103
-
Role of SUV3 helicase in maintaining mitochondrial homeostasis in human cells
-
Khidr L, Wu G, Davila A, Procaccio V, Wallace D, et al. (2008) Role of SUV3 helicase in maintaining mitochondrial homeostasis in human cells. J Biol Chem 283: 27064-27073.
-
(2008)
J Biol Chem
, vol.283
, pp. 27064-27073
-
-
Khidr, L.1
Wu, G.2
Davila, A.3
Procaccio, V.4
Wallace, D.5
-
59
-
-
25844439570
-
Disease gene discovery through integrative genomics
-
DOI 10.1146/annurev.genom.6.080604.162234
-
Giallourakis C, Henson C, Reich M, Xie X, Mootha VK (2005) Disease gene discovery through integrative genomics. Annu Rev Genomics Hum Genet 6: 381-406. (Pubitemid 41397089)
-
(2005)
Annual Review of Genomics and Human Genetics
, vol.6
, pp. 381-406
-
-
Giallourakis, C.1
Henson, C.2
Reich, M.3
Xie, X.4
Mootha, V.K.5
-
60
-
-
67849094731
-
Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis
-
In Press
-
Nilsson R, Schultz IJ, Pierce EL, Soltis KA, Naranuntarat A, et al. (2009) Discovery of genes essential for heme biosynthesis through large-scale gene expression analysis. Cell Metab In Press.
-
(2009)
Cell Metab
-
-
Nilsson, R.1
Schultz, I.J.2
Pierce, E.L.3
Soltis, K.A.4
Naranuntarat, A.5
-
61
-
-
47549116997
-
A critical assessment of Mus musculus gene function prediction using integrated genomic evidence
-
DOI 10.1186/gb-2008-9-s1-s2
-
Pena-Castillo L, Tasan M, Myers CL, Lee H, Joshi T, et al. (2008) A critical assessment of Mus musculus gene function prediction using integrated genomic evidence. Genome Biol 9 Suppl 1: S2. (Pubitemid 352006140)
-
(2008)
Genome Biology
, vol.9
, Issue.SUPPL. 1
-
-
Pena-Castillo, L.1
Tasan, M.2
Myers, C.L.3
Lee, H.4
Joshi, T.5
Zhang, C.6
Guan, Y.7
Leone, M.8
Pagnani, A.9
Kim, W.K.10
Krumpelman, C.11
Tian, W.12
Obozinski, G.13
Qi, Y.14
Mostafavi, S.15
Lin, G.N.16
Berriz, G.F.17
Gibbons, F.D.18
Lanckriet, G.19
Qiu, J.20
Grant, C.21
Barutcuoglu, Z.22
Hill, D.P.23
Warde-Farley, D.24
Grouios, C.25
Ray, D.26
Blake, J.A.27
Deng, M.28
Jordan, M.I.29
Noble, W.S.30
Morris, Q.31
Klein-Seetharaman, J.32
Bar-Joseph, Z.33
Chen, T.34
Sun, F.35
Troyanskaya, O.G.36
Marcotte, E.M.37
Xu, D.38
Hughes, T.R.39
Roth, F.P.40
more..
-
62
-
-
33846086800
-
STRING 7 - Recent developments in the integration and prediction of protein interactions
-
DOI 10.1093/nar/gkl825
-
von Mering C, Jensen LJ, Kuhn M, Chaffron S, Doerks T, et al. (2007) STRING 7-recent developments in the integration and prediction of protein interactions. Nucleic Acids Res 35: D358-362. (Pubitemid 46056231)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.SUPPL. 1
-
-
Von Mering, C.1
Jensen, L.J.2
Kuhn, M.3
Chaffron, S.4
Doerks, T.5
Kruger, B.6
Snel, B.7
Bork, P.8
-
63
-
-
27344435774
-
Gene set enrichment analysis: A knowledge-based approach for interpreting genome-wide expression profiles
-
DOI 10.1073/pnas.0506580102
-
Subramanian A, Tamayo P, Mootha VK, Mukherjee S, Ebert BL, et al. (2005) Gene set enrichment analysis: a knowledge-based approach for interpreting genome-wide expression profiles. Proc Natl Acad Sci U S A 102: 15545-15550. (Pubitemid 41528093)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.43
, pp. 15545-15550
-
-
Subramanian, A.1
Tamayo, P.2
Mootha, V.K.3
Mukherjee, S.4
Ebert, B.L.5
Gillette, M.A.6
Paulovich, A.7
Pomeroy, S.L.8
Golub, T.R.9
Lander, E.S.10
Mesirov, J.P.11
-
64
-
-
38949198791
-
Size, power and false discovery rates
-
Efron B (2007) Size, power and false discovery rates. Annals of Statistics 35: 1351-1377.
-
(2007)
Annals of Statistics
, vol.35
, pp. 1351-1377
-
-
Efron, B.1
-
65
-
-
29144535372
-
Evolving gene/transcript definitions significantly alter the interpretation of GeneChip data
-
DOI 10.1093/nar/gni179
-
Dai M, Wang P, Boyd AD, Kostov G, Athey B, et al. (2005) Evolving gene/ transcript definitions significantly alter the interpretation of GeneChip data. Nucleic Acids Res 33: e175. (Pubitemid 41806403)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.20
-
-
Dai, M.1
Wang, P.2
Boyd, A.D.3
Kostov, G.4
Athey, B.5
Jones, E.G.6
Bunney, W.E.7
Myers, R.M.8
Speed, T.P.9
Akil, H.10
Watson, S.J.11
Meng, F.12
-
66
-
-
0037484275
-
Human CLK2 links cell cycle progression, apoptosis, and telomere length regulation
-
DOI 10.1074/jbc.M300286200
-
Jiang N, Benard CY, Kebir H, Shoubridge EA, Hekimi S (2003) Human CLK2 links cell cycle progression, apoptosis, and telomere length regulation. J Biol Chem 278: 21678-21684. (Pubitemid 36792569)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.24
, pp. 21678-21684
-
-
Jiang, N.1
Benard, C.Y.2
Kebir, H.3
Shoubridge, E.A.4
Hekimi, S.5
-
67
-
-
33646033137
-
A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen
-
Moffat J, Grueneberg DA, Yang X, Kim SY, Kloepfer AM, et al. (2006) A lentiviral RNAi library for human and mouse genes applied to an arrayed viral high-content screen. Cell 124: 1283-1298.
-
(2006)
Cell
, vol.124
, pp. 1283-1298
-
-
Moffat, J.1
Grueneberg, D.A.2
Yang, X.3
Kim, S.Y.4
Kloepfer, A.M.5
-
68
-
-
11844296807
-
Multiplex polymerase chain reaction for simultaneous quantitation of human nuclear, mitochondrial, and male Y-chromosome DNA: Application in human identification
-
DOI 10.1016/j.ab.2004.09.036, PII S0003269704007729
-
Walker JA, Hedges DJ, Perodeau BP, Landry KE, Stoilova N, et al. (2005) Multiplex polymerase chain reaction for simultaneous quantitation of human nuclear, mitochondrial, and male Y-chromosome DNA: application in human identification. Anal Biochem 337: 89-97. (Pubitemid 40092783)
-
(2005)
Analytical Biochemistry
, vol.337
, Issue.1
, pp. 89-97
-
-
Walker, J.A.1
Hedges, D.J.2
Perodeau, B.P.3
Landry, K.E.4
Stoilova, N.5
Laborde, M.E.6
Shewale, J.7
Sinha, S.K.8
Batzer, M.A.9
|