-
1
-
-
0033525788
-
Mitochondrial evolution
-
Gray, M. W., Burger, G. and Lang, B. F. (1999) Mitochondrial evolution. Science 283, 1476-1481
-
(1999)
Science
, vol.283
, pp. 1476-1481
-
-
Gray, M.W.1
Burger, G.2
Lang, B.F.3
-
2
-
-
0019423856
-
Sequence and organization of the human mitochondrial genome
-
DOI 10.1038/290457a0
-
Anderson, S., Bankier, A. T., Barrell, B. G., de Bruijn, M. H., Coulson, A. R., Drouin, J., Eperon, I. C., Nierlich, D. P., Roe, B. A., Sanger, F. et al. (1981) Sequence and organization of the human mitochondrial genome. Nature 290, 457-465 (Pubitemid 11159074)
-
(1981)
Nature
, vol.290
, Issue.5806
, pp. 457-465
-
-
Anderson, S.1
Bankier, A.T.2
Barrell, B.G.3
-
3
-
-
0022760932
-
Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase
-
Fearnley, I. M. and Walker, J. E. (1986) Two overlapping genes in bovine mitochondrial DNA encode membrane components of ATP synthase. EMBO J. 5, 2003-2008
-
(1986)
EMBO J.
, vol.5
, pp. 2003-2008
-
-
Fearnley, I.M.1
Walker, J.E.2
-
4
-
-
0040583581
-
Identification of initiation sites for heavy-strand and light-strand transcription in human mitochondrial DNA
-
DOI 10.1073/pnas.79.23.7195
-
Montoya, J., Christianson, T., Levens, D., Rabinowitz, M. and Attardi, G. (1982) Identification of initiation sites for heavy-strand and light-strand transcription in human mitochondrial DNA. Proc. Natl. Acad. Sci. U.S.A. 79, 7195-7199 (Pubitemid 13190454)
-
(1982)
Proceedings of the National Academy of Sciences of the United States of America
, vol.79
, Issue.23 I
, pp. 7195-7199
-
-
Montoya, J.1
Christianson, T.2
Levens, D.3
-
5
-
-
0020608833
-
The pattern of transcription of the human mitochondrial rRNA genes reveals two overlapping transcription units
-
Montoya, J., Gaines, G. L. and Attardi, G. (1983) The pattern of transcription of the human mitochondrial rRNA genes reveals two overlapping transcription units. Cell 34, 151-159 (Pubitemid 13045470)
-
(1983)
Cell
, vol.34
, Issue.1
, pp. 151-159
-
-
Montoya, J.1
Gaines, G.L.2
Attardi, G.3
-
6
-
-
34548627532
-
DNA replication and transcription in mammalian mitochondria
-
Falkenberg, M., Larsson, N. G. and Gustafsson, C. M. (2007) DNA replication and transcription in mammalian mitochondria. Annu. Rev. Biochem. 76, 679-699
-
(2007)
Annu. Rev. Biochem.
, vol.76
, pp. 679-699
-
-
Falkenberg, M.1
Larsson, N.G.2
Gustafsson, C.M.3
-
7
-
-
79958055322
-
TEFM (c17orf42) is necessary for transcription of human mtDNA
-
Minczuk, M., He, J., Duch, A. M., Ettema, T. J., Chlebowski, A., Dzionek, K., Nijtmans, L. G., Huynen, M. A. and Holt, I. J. (2011) TEFM (c17orf42) is necessary for transcription of human mtDNA. Nucleic Acids Res. 39, 4284-4299
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 4284-4299
-
-
Minczuk, M.1
He, J.2
Duch, A.M.3
Ettema, T.J.4
Chlebowski, A.5
Dzionek, K.6
Nijtmans, L.G.7
Huynen, M.A.8
Holt, I.J.9
-
8
-
-
0024365289
-
Termination of transcription in human mitochondria: Identification and purification of a DNA binding protein factor that promotes termination
-
DOI 10.1016/0092-8674(89)90853-2
-
Kruse, B., Narasimhan, N. and Attardi, G. (1989) Termination of transcription in human mitochondria: identification and purification of a DNA binding protein factor that promotes termination. Cell 58, 391-397 (Pubitemid 19191420)
-
(1989)
Cell
, vol.58
, Issue.2
, pp. 391-397
-
-
Kruse, B.1
Narasimhan, N.2
Attardi, G.3
-
9
-
-
66049104206
-
MTERF2 regulates oxidative phosphorylation by modulating mtDNA transcription
-
Wenz, T., Luca, C., Torraco, A. and Moraes, C. T. (2009) mTERF2 regulates oxidative phosphorylation by modulating mtDNA transcription. Cell Metab. 9, 499-511
-
(2009)
Cell Metab.
, vol.9
, pp. 499-511
-
-
Wenz, T.1
Luca, C.2
Torraco, A.3
Moraes, C.T.4
-
10
-
-
34447539564
-
MTERF3 Is a Negative Regulator of Mammalian mtDNA Transcription
-
DOI 10.1016/j.cell.2007.05.046, PII S009286740700685X
-
Park, C. B., Asin-Cayuela, J., Camara, Y., Shi, Y., Pellegrini, M., Gaspari, M., Wibom, R., Hultenby, K., Erdjument-Bromage, H., Tempst, P. et al. (2007) MTERF3 is a negative regulator of mammalian mtDNA transcription. Cell 130, 273-285 (Pubitemid 47081137)
-
(2007)
Cell
, vol.130
, Issue.2
, pp. 273-285
-
-
Park, C.B.1
Asin-Cayuela, J.2
Camara, Y.3
Shi, Y.4
Pellegrini, M.5
Gaspari, M.6
Wibom, R.7
Hultenby, K.8
Erdjument-Bromage, H.9
Tempst, P.10
Falkenberg, M.11
Gustafsson, C.M.12
Larsson, N.-G.13
-
11
-
-
34250376484
-
Human mitochondrial ribosomal protein MRPL12 interacts directly with mitochondrial RNA polymerase to modulate mitochondrial gene expression
-
DOI 10.1074/jbc.M700461200
-
Wang, Z., Cotney, J. and Shadel, G. S. (2007) Human mitochondrial ribosomal protein MRPL12 interacts directly with mitochondrial RNA polymerase to modulate mitochondrial gene expression. J. Biol. Chem. 282, 12610-12618 (Pubitemid 47103114)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.17
, pp. 12610-12618
-
-
Wang, Z.1
Cotney, J.2
Shadel, G.S.3
-
12
-
-
0019444843
-
tRNA punctuation model of RNA processing in human mitochondria
-
DOI 10.1038/290470a0
-
Ojala, D., Montoya, J. and Attardi, G. (1981) tRNA punctuation model of RNA processing in human mitochondria. Nature 290, 470-474 (Pubitemid 11159076)
-
(1981)
Nature
, vol.290
, Issue.5806
, pp. 470-474
-
-
Ojala, D.1
Montoya, J.2
Attardi, G.3
-
13
-
-
77953871736
-
Human mitochondrial mRNAs-like members of all families, similar but different
-
Temperley, R. J., Wydro, M., Lightowlers, R. N. and Chrzanowska- Lightowlers, Z. M. (2010) Human mitochondrial mRNAs-like members of all families, similar but different. Biochim. Biophys. Acta 1797, 1081-1085
-
(2010)
Biochim. Biophys. Acta
, vol.1797
, pp. 1081-1085
-
-
Temperley, R.J.1
Wydro, M.2
Lightowlers, R.N.3
Chrzanowska-Lightowlers, Z.M.4
-
14
-
-
0031682732
-
The deafness-associated mitochondrial DNA mutation at position 7445, which affects tRNA(Ser(UCN)) precursor processing, has long-range effects on NADH dehydrogenase subunit ND6 gene expression
-
Guan, M. X., Enriquez, J. A., Fischel-Ghodsian, N., Puranam, R. S., Lin, C. P., Maw, M. A. and Attardi, G. (1998) The deafness-associated mitochondrial DNA mutation at position 7445, which affects tRNASer(UCN) precursor processing, has long-range effects on NADH dehydrogenase subunit ND6 gene expression. Mol. Cell. Biol. 18, 5868-5879 (Pubitemid 28450538)
-
(1998)
Molecular and Cellular Biology
, vol.18
, Issue.10
, pp. 5868-5879
-
-
Guan, M.-X.1
Enriquez, J.A.2
Fischel-Ghodsian, N.3
Puranam, R.S.4
Lin, C.P.5
Maw, M.A.6
Attardi, G.7
-
15
-
-
0026537702
-
Transcription mapping of the Ori L region reveals novel precursors of mature RNA species and antisense RNAs in rat mitochondrial genome
-
Sbisa, E., Tullo, A., Nardelli, M., Tanzariello, F. and Saccone, C. (1992) Transcription mapping of the Ori L region reveals novel precursors of mature RNA species and antisense RNAs in rat mitochondrial genome. FEBS Lett. 296, 311-316
-
(1992)
FEBS Lett.
, vol.296
, pp. 311-316
-
-
Sbisa, E.1
Tullo, A.2
Nardelli, M.3
Tanzariello, F.4
Saccone, C.5
-
16
-
-
22544448652
-
Polyadenylation and degradation of human mitochondrial RNA: The prokaryotic past leaves its mark
-
DOI 10.1128/MCB.25.15.6427-6435.2005
-
Slomovic, S., Laufer, D., Geiger, D. and Schuster, G. (2005) Polyadenylation and degradation of human mitochondrial RNA: the prokaryotic past leaves its mark. Mol. Cell. Biol. 25, 6427-6435 (Pubitemid 41023219)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.15
, pp. 6427-6435
-
-
Slomovic, S.1
Laufer, D.2
Geiger, D.3
Schuster, G.4
-
17
-
-
0021814160
-
Characterization of an RNase P activity from HeLa cell mitochondria. Comparison with the cytosol RNase P activity
-
Doersen, C. J., Guerrier-Takada, C., Altman, S. and Attardi, G. (1985) Characterization of an RNase P activity from HeLa cell mitochondria. Comparison with the cytosol RNase P activity. J. Biol. Chem. 260, 5942-5949 (Pubitemid 15072493)
-
(1985)
Journal of Biological Chemistry
, vol.260
, Issue.10
, pp. 5942-5949
-
-
Doersen, C.-J.1
Guerrier-Takada, C.2
Altman, S.3
Attardi, G.4
-
18
-
-
54549088876
-
RNase P without RNA: Identification and functional reconstitution of the human mitochondrial tRNA processing enzyme
-
Holzmann, J., Frank, P., Loffler, E., Bennett, K. L., Gerner, C. and Rossmanith, W. (2008) RNase P without RNA: identification and functional reconstitution of the human mitochondrial tRNA processing enzyme. Cell 135, 462-474
-
(2008)
Cell
, vol.135
, pp. 462-474
-
-
Holzmann, J.1
Frank, P.2
Loffler, E.3
Bennett, K.L.4
Gerner, C.5
Rossmanith, W.6
-
19
-
-
77955320529
-
PNPASE regulates RNA import into mitochondria
-
Wang, G., Chen, H. W., Oktay, Y., Zhang, J., Allen, E. L., Smith, G. M., Fan, K. C., Hong, J. S., French, S. W., McCaffery, J. M. et al. (2010) PNPASE regulates RNA import into mitochondria. Cell 142, 456-467
-
(2010)
Cell
, vol.142
, pp. 456-467
-
-
Wang, G.1
Chen, H.W.2
Oktay, Y.3
Zhang, J.4
Allen, E.L.5
Smith, G.M.6
Fan, K.C.7
Hong, J.S.8
French, S.W.9
McCaffery, J.M.10
-
20
-
-
1242309516
-
Drosophila Rnase Z processes mitochondrial and nuclear pre-tRNA 3′ ends in vivo
-
DOI 10.1093/nar/gkh182
-
Dubrovsky, E. B., Dubrovskaya, V. A., Levinger, L., Schiffer, S. and Marchfelder, A. (2004) Drosophila RNase Z processes mitochondrial and nuclear pre-tRNA 3′ ends in vivo. Nucleic Acids Res. 32, 255-262 (Pubitemid 38228624)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.1
, pp. 255-262
-
-
Dubrovsky, E.B.1
Dubrovskaya, V.A.2
Levinger, L.3
Schiffer, S.4
Marchfelder, A.5
-
21
-
-
85046980054
-
Involvement of human ELAC2 gene product in 3′ end processing of mitochondrial tRNAs
-
Brzezniak, L. K., Bijata, M., Szczesny, R. J. and Stepien, P. P. (2011) Involvement of human ELAC2 gene product in 3′ end processing of mitochondrial tRNAs. RNA Biol. 8, 616-26
-
(2011)
RNA Biol.
, vol.8
, pp. 616-626
-
-
Brzezniak, L.K.1
Bijata, M.2
Szczesny, R.J.3
Stepien, P.P.4
-
22
-
-
79955716664
-
Localization of human RNase Z isoforms: Dual nuclear/ mitochondrial targeting of the ELAC2 gene product by alternative translation initiation
-
Rossmanith, W. (2011) Localization of human RNase Z isoforms: dual nuclear/ mitochondrial targeting of the ELAC2 gene product by alternative translation initiation. PLoS ONE 6, e19152
-
(2011)
PLoS ONE
, vol.6
-
-
Rossmanith, W.1
-
23
-
-
80052395499
-
RNA processing in human mitochondria
-
Sanchez, M. I., Mercer, T. R., Davies, S. M., Shearwood, A. M., Nygard, K. K., Richman, T. R., Mattick, J. S., Rackham, O. and Filipovska, A. (2011) RNA processing in human mitochondria. Cell Cycle 10, 2904-2916
-
(2011)
Cell Cycle
, vol.10
, pp. 2904-2916
-
-
Sanchez, M.I.1
Mercer, T.R.2
Davies, S.M.3
Shearwood, A.M.4
Nygard, K.K.5
Richman, T.R.6
Mattick, J.S.7
Rackham, O.8
Filipovska, A.9
-
24
-
-
66749150948
-
How do human cells react to the absence of mitochondrial DNA?
-
Mineri, R., Pavelka, N., Fernandez-Vizarra, E., Ricciardi-Castagnoli, P., Zeviani, M. and Tiranti, V. (2009) How do human cells react to the absence of mitochondrial DNA? PLoS ONE 4, e5713
-
(2009)
PLoS ONE
, vol.4
-
-
Mineri, R.1
Pavelka, N.2
Fernandez-Vizarra, E.3
Ricciardi-Castagnoli, P.4
Zeviani, M.5
Tiranti, V.6
-
25
-
-
0035955658
-
Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases
-
Nagaike, T., Suzuki, T., Tomari, Y., Takemoto-Hori, C., Negayama, F., Watanabe, K. and Ueda, T. (2001) Identification and characterization of mammalian mitochondrial tRNA nucleotidyltransferases. J. Biol. Chem. 276, 40041-40049
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 40041-40049
-
-
Nagaike, T.1
Suzuki, T.2
Tomari, Y.3
Takemoto-Hori, C.4
Negayama, F.5
Watanabe, K.6
Ueda, T.7
-
26
-
-
0036906870
-
Large functional range of steady-state levels of nuclear and mitochondrial transcripts coding for the subunits of the human mitochondrial OXPHOS system
-
Duborjal, H., Beugnot, R., Mousson de Camaret, B. and Issartel, J. P. (2002) Large functional range of steady-state levels of nuclear and mitochondrial transcripts coding for the subunits of the human mitochondrial OXPHOS system. Genome Res. 12, 1901-1909
-
(2002)
Genome Res.
, vol.12
, pp. 1901-1909
-
-
Duborjal, H.1
Beugnot, R.2
Mousson De Camaret, B.3
Issartel, J.P.4
-
27
-
-
80052007901
-
The human mitochondrial transcriptome
-
Mercer, T. R., Neph, S., Dinger, M. E., Crawford, J., Smith, M. A., Shearwood, A. M., Haugen, E., Bracken, C. P., Rackham, O., Stamatoyannopoulos, J. A. et al. (2011) The human mitochondrial transcriptome. Cell 146, 645-658
-
(2011)
Cell
, vol.146
, pp. 645-658
-
-
Mercer, T.R.1
Neph, S.2
Dinger, M.E.3
Crawford, J.4
Smith, M.A.5
Shearwood, A.M.6
Haugen, E.7
Bracken, C.P.8
Rackham, O.9
Stamatoyannopoulos, J.A.10
-
28
-
-
81255198360
-
Exonucleases and endonucleases involved in polyadenylation-assisted RNA decay
-
Slomovic, S. and Schuster, G. (2011) Exonucleases and endonucleases involved in polyadenylation-assisted RNA decay. Wiley Interdiscip. Rev. RNA 2, 106-123
-
(2011)
Wiley Interdiscip. Rev. RNA
, vol.2
, pp. 106-123
-
-
Slomovic, S.1
Schuster, G.2
-
29
-
-
0024892285
-
The role of a conserved dodecamer sequence in yeast mitochondrial gene expression
-
Butow, R. A., Zhu, H., Perlman, P. and Conrad-Webb, H. (1989) The role of a conserved dodecamer sequence in yeast mitochondrial gene expression. Genome 31, 757-760 (Pubitemid 20118467)
-
(1989)
Genome
, vol.31
, Issue.2
, pp. 757-760
-
-
Butow, R.A.1
Zhu, H.2
Perlman, P.3
Conrad-Webb, H.4
-
30
-
-
79953326716
-
Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes
-
Aphasizheva, I., Maslov, D., Wang, X., Huang, L. and Aphasizhev, R. (2011) Pentatricopeptide repeat proteins stimulate mRNA adenylation/uridylation to activate mitochondrial translation in trypanosomes. Mol. Cell 42, 106-117
-
(2011)
Mol. Cell
, vol.42
, pp. 106-117
-
-
Aphasizheva, I.1
Maslov, D.2
Wang, X.3
Huang, L.4
Aphasizhev, R.5
-
31
-
-
44649128170
-
3′ adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria
-
DOI 10.1038/emboj.2008.87, PII EMBOJ200887
-
Etheridge, R. D., Aphasizheva, I., Gershon, P. D. and Aphasizhev, R. (2008) 3′Adenylation determines mRNA abundance and monitors completion of RNA editing in T. brucei mitochondria. EMBO J. 27, 1596-1608 (Pubitemid 351794033)
-
(2008)
EMBO Journal
, vol.27
, Issue.11
, pp. 1596-1608
-
-
Etheridge, R.D.1
Aphasizheva, I.2
Gershon, P.D.3
Aphasizhev, R.4
-
32
-
-
0141590523
-
Investigation of a pathogenic mtDNA microdeletion reveals a translation-dependent deadenylation decay pathway in human mitochondria
-
DOI 10.1093/hmg/ddg238
-
Temperley, R. J., Seneca, S. H., Tonska, K., Bartnik, E., Bindoff, L. A., Lightowlers, R. N. and Chrzanowska-Lightowlers, Z. M. (2003) Investigation of a pathogenic mtDNA microdeletion reveals a translation-dependent deadenylation decay pathway in human mitochondria. Hum. Mol. Genet. 12, 2341-2348 (Pubitemid 37160878)
-
(2003)
Human Molecular Genetics
, vol.12
, Issue.18
, pp. 2341-2348
-
-
Temperley, R.J.1
Seneca, S.H.2
Tonska, K.3
Bartnik, E.4
Bindoff, L.A.5
Lightowlers, R.N.6
Chrzanowska-Lightowlers, Z.M.A.7
-
33
-
-
11344287222
-
Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase
-
DOI 10.1093/nar/gkh923
-
Tomecki, R., Dmochowska, A., Gewartowski, K., Dziembowski, A. and Stepien, P. P. (2004) Identification of a novel human nuclear-encoded mitochondrial poly(A) polymerase. Nucleic Acids Res. 32, 6001-6014 (Pubitemid 40073995)
-
(2004)
Nucleic Acids Research
, vol.32
, Issue.20
, pp. 6001-6014
-
-
Tomecki, R.1
Dmochowska, A.2
Gewartowski, K.3
Dziembowski, A.4
Stepien, P.P.5
-
34
-
-
21244454028
-
Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase
-
DOI 10.1074/jbc.M500804200
-
Nagaike, T., Suzuki, T., Katoh, T. and Ueda, T. (2005) Human mitochondrial mRNAs are stabilized with polyadenylation regulated by mitochondria-specific poly(A) polymerase and polynucleotide phosphorylase. J. Biol. Chem. 280, 19721-19727 (Pubitemid 41379497)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.20
, pp. 19721-19727
-
-
Nagaike, T.1
Suzuki, T.2
Katoh, T.3
Ueda, T.4
-
35
-
-
0037125970
-
Cytoplasmic poly(A) polymerases mediate cellular responses to S phase arrest
-
Read, R. L., Martinho, R. G., Wang, S. W., Carr, A. M. and Norbury, C. J. (2002) Cytoplasmic poly(A) polymerases mediate cellular responses to S phase arrest. Proc. Natl. Acad. Sci. U.S.A. 99, 12079-12084
-
(2002)
Proc. Natl. Acad. Sci. U.S.A.
, vol.99
, pp. 12079-12084
-
-
Read, R.L.1
Martinho, R.G.2
Wang, S.W.3
Carr, A.M.4
Norbury, C.J.5
-
36
-
-
1842585784
-
Mammalian GLD-2 homologs are poly(A) polymerases
-
DOI 10.1073/pnas.0400779101
-
Kwak, J. E., Wang, L., Ballantyne, S., Kimble, J. and Wickens, M. (2004) Mammalian GLD-2 homologs are poly(A) polymerases. Proc. Natl. Acad. Sci. U.S.A. 101, 4407-4412 (Pubitemid 38437425)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.13
, pp. 4407-4412
-
-
Kwak, J.E.1
Wang, L.2
Ballantyne, S.3
Kimble, J.4
Wickens, M.5
-
37
-
-
0037205292
-
Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA
-
Saitoh, S., Chabes, A., McDonald, W. H., Thelander, L., Yates, J. R. and Russell, P. (2002) Cid13 is a cytoplasmic poly(A) polymerase that regulates ribonucleotide reductase mRNA. Cell 109, 563-573
-
(2002)
Cell
, vol.109
, pp. 563-573
-
-
Saitoh, S.1
Chabes, A.2
McDonald, W.H.3
Thelander, L.4
Yates, J.R.5
Russell, P.6
-
38
-
-
78249252356
-
Defective mitochondrial mRNA maturation is associated with spastic ataxia
-
Crosby, A. H., Patel, H., Chioza, B. A., Proukakis, C., Gurtz, K., Patton, M. A., Sharifi, R., Harlalka, G., Simpson, M. A., Dick, K. et al. (2010) Defective mitochondrial mRNA maturation is associated with spastic ataxia. Am. J. Hum. Genet. 87, 655-660
-
(2010)
Am. J. Hum. Genet.
, vol.87
, pp. 655-660
-
-
Crosby, A.H.1
Patel, H.2
Chioza, B.A.3
Proukakis, C.4
Gurtz, K.5
Patton, M.A.6
Sharifi, R.7
Harlalka, G.8
Simpson, M.A.9
Dick, K.10
-
39
-
-
0034072252
-
Polynucleotide phosphorylase, RNase II ansi RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli
-
DOI 10.1046/j.1365-2958.2000.01921.x
-
Mohanty, B. K. and Kushner, S. R. (2000) Polynucleotide phosphorylase, RNase II and RNase E play different roles in the in vivo modulation of polyadenylation in Escherichia coli. Mol. Microbiol. 36, 982-994 (Pubitemid 30326542)
-
(2000)
Molecular Microbiology
, vol.36
, Issue.4
, pp. 982-994
-
-
Mohanty, B.K.1
Kushner, S.R.2
-
40
-
-
0037869109
-
Human polynucleotide phosphorylase, hPNPase, is localized in mitochondria
-
DOI 10.1016/S0022-2836(03)00528-X
-
Piwowarski, J., Grzechnik, P., Dziembowski, A., Dmochowska, A., Minczuk, M. and Stepien, P. P. (2003) Human polynucleotide phosphorylase, hPNPase, is localized in mitochondria. J. Mol. Biol. 329, 853-857 (Pubitemid 36683143)
-
(2003)
Journal of Molecular Biology
, vol.329
, Issue.5
, pp. 853-857
-
-
Piwowarski, J.1
Grzechnik, P.2
Dziembowski, A.3
Dmochowska, A.4
Minczuk, M.5
Stepien, P.P.6
-
41
-
-
23344451161
-
OLD-35) mediating cellular senescence
-
DOI 10.1128/MCB.25.16.7333-7343.2005
-
Sarkar, D., Park, E. S., Emdad, L., Randolph, A., Valerie, K. and Fisher, P. B. (2005) Defining the domains of human polynucleotide phosphorylase (hPNPaseOLD-35) mediating cellular senescence. Mol. Cell. Biol. 25, 7333-7343 (Pubitemid 41105928)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.16
, pp. 7333-7343
-
-
Sarkar, D.1
Park, E.S.2
Emdad, L.3
Randolph, A.4
Valerie, K.5
Fisher, P.B.6
-
42
-
-
38649100934
-
Analysis of the human polynucleotide phosphorylase (PNPase) reveals differences in RNA binding and response to phosphate compared to its bacterial and chloroplast counterparts
-
DOI 10.1261/rna.698108
-
Portnoy, V., Palnizky, G., Yehudai-Resheff, S., Glaser, F. and Schuster, G. (2008) Analysis of the human polynucleotide phosphorylase (PNPase) reveals differences in RNA binding and response to phosphate compared to its bacterial and chloroplast counterparts. RNA 14, 297-309 (Pubitemid 351171590)
-
(2008)
RNA
, vol.14
, Issue.2
, pp. 297-309
-
-
Portnoy, V.1
Palnizky, G.2
Yehudai-Resheff, S.3
Glaser, F.4
Schuster, G.5
-
43
-
-
38649115643
-
Stable PNPase RNAi silencing: Its effect on the processing and adenylation of human mitochondrial RNA
-
DOI 10.1261/rna.697308
-
Slomovic, S. and Schuster, G. (2008) Stable PNPase RNAi silencing: its effect on the processing and adenylation of human mitochondrial RNA. RNA 14, 310-323 (Pubitemid 351171591)
-
(2008)
RNA
, vol.14
, Issue.2
, pp. 310-323
-
-
Slomovic, S.1
Schuster, G.2
-
44
-
-
33751008668
-
Mammalian polynucleotide phosphorylase is an intermembrane space RNase that maintains mitochondrial homeostasis
-
DOI 10.1128/MCB.01002-06
-
Chen, H. W., Rainey, R. N., Balatoni, C. E., Dawson, D. W., Troke, J. J., Wasiak, S., Hong, J. S., McBride, H. M., Koehler, C. M., Teitell, M. A. and French, S. W. (2006) Mammalian polynucleotide phosphorylase is an intermembrane space RNase that maintains mitochondrial homeostasis. Mol. Cell. Biol. 26, 8475-8487 (Pubitemid 44748580)
-
(2006)
Molecular and Cellular Biology
, vol.26
, Issue.22
, pp. 8475-8487
-
-
Chen, H.-W.1
Rainey, R.N.2
Balatoni, C.E.3
Dawson, D.W.4
Troke, J.J.5
Wasiak, S.6
Hong, J.S.7
McBride, H.M.8
Koehler, C.M.9
Teitell, M.A.10
French, S.W.11
-
45
-
-
84864323386
-
PNPASE and RNA trafficking into mitochondria
-
doi:10.1016/j.bbagrm.2011.10.001
-
Wang, G., Shimada, E., Koehler, C. M. and Teitell, M. A. (2011) PNPASE and RNA trafficking into mitochondria. Biochim. Biophys. Acta, doi:10.1016/j.bbagrm.2011.10.001
-
(2011)
Biochim. Biophys. Acta
-
-
Wang, G.1
Shimada, E.2
Koehler, C.M.3
Teitell, M.A.4
-
46
-
-
1242314743
-
Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons
-
Chrzanowska-Lightowlers, Z. M., Temperley, R. J., Smith, P. M., Seneca, S. H. and Lightowlers, R. N. (2004) Functional polypeptides can be synthesized from human mitochondrial transcripts lacking termination codons. Biochem. J. 377, 725-731 (Pubitemid 38221844)
-
(2004)
Biochemical Journal
, vol.377
, Issue.3
, pp. 725-731
-
-
Chrzanowska-Lightowlers, Z.M.A.1
Temperley, R.J.2
Smith, P.M.3
Seneca, S.H.4
Lightowlers, R.N.5
-
47
-
-
58249083195
-
Measuring mRNA decay in human mitochondria
-
Nagao, A., Hino-Shigi, N. and Suzuki, T. (2008) Measuring mRNA decay in human mitochondria. Methods Enzymol. 447, 489-99
-
(2008)
Methods Enzymol.
, vol.447
, pp. 489-499
-
-
Nagao, A.1
Hino-Shigi, N.2
Suzuki, T.3
-
48
-
-
33645213506
-
Differential stability of mitochondrial mRNA in HeLa cells
-
Piechota, J., Tomecki, R., Gewartowski, K., Szczesny, R., Dmochowska, A., Kudla, M., Dybczynska, L., Stepien, P. P. and Bartnik, E. (2006) Differential stability of mitochondrial mRNA in HeLa cells. Acta Biochim. Pol. 53, 157-168
-
(2006)
Acta Biochim. Pol.
, vol.53
, pp. 157-168
-
-
Piechota, J.1
Tomecki, R.2
Gewartowski, K.3
Szczesny, R.4
Dmochowska, A.5
Kudla, M.6
Dybczynska, L.7
Stepien, P.P.8
Bartnik, E.9
-
49
-
-
77954366511
-
Targeting of the cytosolic poly(A) binding protein PABPC1 to mitochondria causes mitochondrial translation inhibition
-
Wydro, M., Bobrowicz, A., Temperley, R. J., Lightowlers, R. N. and Chrzanowska-Lightowlers, Z. M. (2010) Targeting of the cytosolic poly(A) binding protein PABPC1 to mitochondria causes mitochondrial translation inhibition. Nucleic Acids Res. 38, 3732-3742
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 3732-3742
-
-
Wydro, M.1
Bobrowicz, A.2
Temperley, R.J.3
Lightowlers, R.N.4
Chrzanowska-Lightowlers, Z.M.5
-
50
-
-
80053219536
-
PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria
-
Rorbach, J., Nicholls, T. J. and Minczuk, M. (2011) PDE12 removes mitochondrial RNA poly(A) tails and controls translation in human mitochondria. Nucleic Acids Res. 39, 7750-7763
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 7750-7763
-
-
Rorbach, J.1
Nicholls, T.J.2
Minczuk, M.3
-
51
-
-
79956015860
-
Human 2′-phosphodiesterase localizes to the mitochondrial matrix with a putative function in mitochondrial RNA turnover
-
Poulsen, J. B., Andersen, K. R., Kjaer, K. H., Durand, F., Faou, P., Vestergaard, A. L., Talbo, G. H., Hoogenraad, N., Brodersen, D. E., Justesen, J. and Martensen, P. M. (2011) Human 2′-phosphodiesterase localizes to the mitochondrial matrix with a putative function in mitochondrial RNA turnover. Nucleic Acids Res. 39, 3754-3770
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 3754-3770
-
-
Poulsen, J.B.1
Andersen, K.R.2
Kjaer, K.H.3
Durand, F.4
Faou, P.5
Vestergaard, A.L.6
Talbo, G.H.7
Hoogenraad, N.8
Brodersen, D.E.9
Justesen, J.10
Martensen, P.M.11
-
52
-
-
74549114163
-
Hungry codons promote frameshifting in human mitochondrial ribosomes
-
Temperley, R., Richter, R., Dennerlein, S., Lightowlers, R. N. and Chrzanowska-Lightowlers, Z. M. (2010) Hungry codons promote frameshifting in human mitochondrial ribosomes. Science 327, 301
-
(2010)
Science
, vol.327
, pp. 301
-
-
Temperley, R.1
Richter, R.2
Dennerlein, S.3
Lightowlers, R.N.4
Chrzanowska-Lightowlers, Z.M.5
-
53
-
-
0028310842
-
Cbp1p is required for message stability following 5′-processing of COB mRNA
-
Chen, W. and Dieckmann, C. L. (1994) Cbp1p is required for message stability following 5′-processing of COB mRNA. J. Biol. Chem. 269, 16574-16578
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 16574-16578
-
-
Chen, W.1
Dieckmann, C.L.2
-
55
-
-
0028984035
-
The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae
-
Manthey, G. M. and McEwen, J. E. (1995) The product of the nuclear gene PET309 is required for translation of mature mRNA and stability or production of intron-containing RNAs derived from the mitochondrial COX1 locus of Saccharomyces cerevisiae. EMBO J. 14, 4031-4043
-
(1995)
EMBO J.
, vol.14
, pp. 4031-4043
-
-
Manthey, G.M.1
McEwen, J.E.2
-
56
-
-
0027971392
-
Transcription of rat mitochondrial NADH-dehydrogenase subunits presence of antisense and precursor RNA species
-
DOI 10.1016/0014-5793(94)01080-3
-
Tullo, A., Tanzariello, F., D'Erchia, A. M., Nardelli, M., Papeo, P. A., Sbisa, E. and Saccone, C. (1994) Transcription of rat mitochondrial NADH-dehydrogenase subunits. Presence of antisense and precursor RNA species. FEBS Lett. 354, 30-36 (Pubitemid 24331699)
-
(1994)
FEBS Letters
, vol.354
, Issue.1
, pp. 30-36
-
-
Tullo, A.1
-
57
-
-
33748544977
-
Identification of small non-coding RNAs from mitochondria and chloroplasts
-
DOI 10.1093/nar/gkl448
-
Lung, B., Zemann, A., Madej, M. J., Schuelke, M., Techritz, S., Ruf, S., Bock, R. and Huttenhofer, A. (2006) Identification of small non-coding RNAs from mitochondria and chloroplasts. Nucleic Acids Res. 34, 3842-3852 (Pubitemid 44391000)
-
(2006)
Nucleic Acids Research
, vol.34
, Issue.14
, pp. 3842-3852
-
-
Lung, B.1
Zemann, A.2
Madej, M.J.3
Schuelke, M.4
Techritz, S.5
Ruf, S.6
Bock, R.7
Huttenhofer, A.8
-
58
-
-
3943080710
-
The molecular mechanics of eukaryotic translation
-
DOI 10.1146/annurev.biochem.73.030403.080419
-
Kapp, L. D. and Lorsch, J. R. (2004) The molecular mechanics of eukaryotic translation. Annu. Rev. Biochem. 73, 657-704 (Pubitemid 39050383)
-
(2004)
Annual Review of Biochemistry
, vol.73
, pp. 657-704
-
-
Kapp, L.D.1
Lorsch, J.R.2
-
59
-
-
0029887623
-
Acute depression of mitochondrial protein synthesis during anoxia: Contributions of oxygen sensing, matrix acidification, and redox state
-
Kwast, K. E. and Hand, S. C. (1996) Acute depression of mitochondrial protein synthesis during anoxia: contributions of oxygen sensing, matrix acidification, and redox state. J. Biol. Chem. 271, 7313-7319
-
(1996)
J. Biol. Chem.
, vol.271
, pp. 7313-7319
-
-
Kwast, K.E.1
Hand, S.C.2
-
60
-
-
0029936184
-
Profiles of nuclear and mitochondrial encoded mRNAs in developing and quiescent embryos of Artemia franciscana
-
Hardewig, I., Anchordoguy, T. J., Crawford, D. L. and Hand, S. C. (1996) Profiles of nuclear and mitochondrial encoded mRNAs in developing and quiescent embryos of Artemia franciscana . Mol. Cell. Biochem. 158, 139-47 (Pubitemid 26187595)
-
(1996)
Molecular and Cellular Biochemistry
, vol.158
, Issue.2
, pp. 139-147
-
-
Hardewig, I.1
Anchordoguy, T.J.2
Crawford, D.L.3
Hand, S.C.4
-
61
-
-
0242370136
-
Mitochondrial mRNA stability and polyadenylation during anoxia-induced quiescence in the brine shrimp Artemia franciscana
-
DOI 10.1242/jeb.00595
-
Eads, B. D. and Hand, S. C. (2003) Mitochondrial mRNA stability and polyadenylation during anoxia-induced quiescence in the brine shrimp Artemia franciscana . J. Exp. Biol. 206, 3681-3692 (Pubitemid 37343072)
-
(2003)
Journal of Experimental Biology
, vol.206
, Issue.20
, pp. 3681-3692
-
-
Eads, B.D.1
Hand, S.C.2
-
62
-
-
0023988516
-
Specific translational activation by nuclear gene products occurs in the 5′ untranslated leader of a yeast mitochondrial mRNA
-
Costanzo, M. C. and Fox, T. D. (1988) Specific translational activation by nuclear gene products occurs in the 5′ untranslated leader of a yeast mitochondrial mRNA. Proc. Natl. Acad. Sci. U.S.A. 85, 2677-2681
-
(1988)
Proc. Natl. Acad. Sci. U.S.A.
, vol.85
, pp. 2677-2681
-
-
Costanzo, M.C.1
Fox, T.D.2
-
63
-
-
0027526328
-
PET111 acts in the 5'-leader of the Saccharomyces cerevisiae mitochondrial COX2 mRNA to promote its translation
-
Mulero, J. J. and Fox, T. D. (1993) PET111 acts in the 5′-leader of the Saccharomyces cerevisiae mitochondrial COX2 mRNA to promote its translation. Genetics 133, 509-516 (Pubitemid 23066558)
-
(1993)
Genetics
, vol.133
, Issue.3
, pp. 509-516
-
-
Mulero, J.J.1
Fox, T.D.2
-
64
-
-
0023144495
-
The yeast nuclear gene CBS1 is required for translation of mitochondrial mRNAs bearing the cob5' untranslated leader
-
DOI 10.1007/BF00326534
-
Rodel, G. and Fox, T. D. (1987) The yeast nuclear gene CBS1 is required for translation of mitochondrial mRNAs bearing the cob 5′ untranslated leader. Mol. Gen. Genet. 206, 45-50 (Pubitemid 17014164)
-
(1987)
Molecular and General Genetics
, vol.206
, Issue.1
, pp. 45-50
-
-
Rodel, G.1
Fox, T.D.2
-
65
-
-
0347574101
-
Coupling of mitochondrial translation with the formation of respiratory complexes in yeast mitochondria
-
Chacinska, A. and Boguta, M. (2000) Coupling of mitochondrial translation with the formation of respiratory complexes in yeast mitochondria. Acta Biochim. Pol. 47, 973-991
-
(2000)
Acta Biochim. Pol.
, vol.47
, pp. 973-991
-
-
Chacinska, A.1
Boguta, M.2
-
66
-
-
67649833762
-
Mutation in TACO1, encoding a translational activator of COX I, results in cytochrome c oxidase deficiency and late-onset Leigh syndrome
-
Weraarpachai, W., Antonicka, H., Sasarman, F., Seeger, J., Schrank, B., Kolesar, J. E., Lochmuller, H., Chevrette, M., Kaufman, B. A., Horvath, R. and Shoubridge, E. A. (2009) Mutation in TACO1, encoding a translational activator of COX I, results in cytochrome c oxidase deficiency and late-onset Leigh syndrome. Nat. Genet. 41, 833-837
-
(2009)
Nat. Genet.
, vol.41
, pp. 833-837
-
-
Weraarpachai, W.1
Antonicka, H.2
Sasarman, F.3
Seeger, J.4
Schrank, B.5
Kolesar, J.E.6
Lochmuller, H.7
Chevrette, M.8
Kaufman, B.A.9
Horvath, R.10
Shoubridge, E.A.11
-
67
-
-
56549095978
-
Pentatricopeptide repeat proteins: A socket set for organelle gene expression
-
Schmitz-Linneweber, C. and Small, I. (2008) Pentatricopeptide repeat proteins: a socket set for organelle gene expression. Trends Plant Sci. 13, 663-670
-
(2008)
Trends Plant Sci.
, vol.13
, pp. 663-670
-
-
Schmitz-Linneweber, C.1
Small, I.2
-
68
-
-
84864293617
-
The role of mammalian PPR domain proteins in the regulation of mitochondrial gene expression
-
doi: 10.1016/j.bbagrm.2011.10.007
-
Rackham, O. and Filipovska, A. (2011) The role of mammalian PPR domain proteins in the regulation of mitochondrial gene expression. Biochim. Biophys. Acta, doi: 10.1016/j.bbagrm.2011.10.007
-
(2011)
Biochim. Biophys. Acta
-
-
Rackham, O.1
Filipovska, A.2
-
69
-
-
0037458031
-
Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics
-
DOI 10.1073/pnas.242716699
-
Mootha, V. K., Lepage, P., Miller, K., Bunkenborg, J., Reich, M., Hjerrild, M., Delmonte, T., Villeneuve, A., Sladek, R., Xu, F., Mitchell, G. A. et al. (2003) Identification of a gene causing human cytochrome c oxidase deficiency by integrative genomics. Proc. Natl. Acad. Sci. U.S.A. 100, 605-610 (Pubitemid 36126099)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.2
, pp. 605-610
-
-
Mootha, V.K.1
Lepage, P.2
Miller, K.3
Bunkenborg, J.4
Reich, M.5
Hjerrild, M.6
Delmonte, T.7
Villeneuve, A.8
Sladek, R.9
Xu, F.10
Mitchell, G.A.11
Morin, C.12
Mann, M.13
Hudson, T.J.14
Robinson, B.15
Rioux, J.D.16
Lander, E.S.17
-
70
-
-
4344595430
-
The role of the LRPPRC (leucine-rich pentatricopeptide repeal cassette) gene in cytochrome oxidase assembly: Mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA
-
DOI 10.1042/BJ20040469
-
Xu, F., Morin, C., Mitchell, G., Ackerley, C. and Robinson, B. H. (2004) The role of the LRPPRC (leucine-rich pentatricopeptide repeat cassette) gene in cytochrome oxidase assembly: mutation causes lowered levels of COX (cytochrome c oxidase) I and COX III mRNA. Biochem. J. 382, 331-336 (Pubitemid 39141597)
-
(2004)
Biochemical Journal
, vol.382
, Issue.1
, pp. 331-336
-
-
Xu, F.1
Morin, C.2
Mitchell, G.3
Ackerley, C.4
Robinson, B.H.5
-
71
-
-
33751087041
-
Defects in energy homeostasis in Leigh syndrome French Canadian variant through PGC-1α/LRP130 complex
-
DOI 10.1101/gad.1483906
-
Cooper, M. P., Qu, L., Rohas, L. M., Lin, J., Yang, W., Erdjument-Bromage, H., Tempst, P. and Spiegelman, B. M. (2006) Defects in energy homeostasis in Leigh syndrome French Canadian variant through PGC-1α/LRP130 complex. Genes Dev. 20, 2996-3009 (Pubitemid 44771734)
-
(2006)
Genes and Development
, vol.20
, Issue.21
, pp. 2996-3009
-
-
Cooper, M.P.1
Qu, L.2
Rohas, L.M.3
Lin, J.4
Yang, W.5
Erdjument-Bromage, H.6
Tempst, P.7
Spiegelman, B.M.8
-
72
-
-
77950901962
-
LRPPRC and SLIRP interact in a ribonucleoprotein complex that regulates posttranscriptional gene expression in mitochondria
-
Sasarman, F., Brunel-Guitton, C., Antonicka, H., Wai, T. and Shoubridge, E. A. (2010) LRPPRC and SLIRP interact in a ribonucleoprotein complex that regulates posttranscriptional gene expression in mitochondria. Mol. Biol. Cell 21, 1315-1323
-
(2010)
Mol. Biol. Cell
, vol.21
, pp. 1315-1323
-
-
Sasarman, F.1
Brunel-Guitton, C.2
Antonicka, H.3
Wai, T.4
Shoubridge, E.A.5
-
73
-
-
84055213668
-
LRPPRC mutation suppresses cytochrome oxidase activity by altering mitochondrial RNA transcript stability in a mouse model
-
Xu, F., Addis, J. B., Cameron, J. M. and Robinson, B. H. (2012) LRPPRC mutation suppresses cytochrome oxidase activity by altering mitochondrial RNA transcript stability in a mouse model. Biochem. J. 441, 275-283
-
(2012)
Biochem. J.
, vol.441
, pp. 275-283
-
-
Xu, F.1
Addis, J.B.2
Cameron, J.M.3
Robinson, B.H.4
-
74
-
-
77956136985
-
Leucine-rich pentatricopeptide-repeat containing protein regulates mitochondrial transcription
-
Sondheimer, N., Fang, J. K., Polyak, E., Falk, M. J. and Avadhani, N. G. (2010) Leucine-rich pentatricopeptide-repeat containing protein regulates mitochondrial transcription. Biochemistry 49, 7467-7473
-
(2010)
Biochemistry
, vol.49
, pp. 7467-7473
-
-
Sondheimer, N.1
Fang, J.K.2
Polyak, E.3
Falk, M.J.4
Avadhani, N.G.5
-
75
-
-
84857192195
-
LRPPRC is necessary for polyadenylation and coordination of translation of mitochondrial mRNAs
-
Ruzzenente, B., Metodiev, M. D., Wredenberg, A., Bratic, A., Park, C. B., Camara, Y., Milenkovic, D., Zickermann, V., Wibom, R., Hultenby, K. et al. (2011) LRPPRC is necessary for polyadenylation and coordination of translation of mitochondrial mRNAs. EMBO J. 31, 443-456
-
(2011)
EMBO J.
, vol.31
, pp. 443-456
-
-
Ruzzenente, B.1
Metodiev, M.D.2
Wredenberg, A.3
Bratic, A.4
Park, C.B.5
Camara, Y.6
Milenkovic, D.7
Zickermann, V.8
Wibom, R.9
Hultenby, K.10
-
76
-
-
57649136397
-
Modulation of PGC-1 coactivator pathways in brown fat differentiation through LRP130
-
Cooper, M. P., Uldry, M., Kajimura, S., Arany, Z. and Spiegelman, B. M. (2008) Modulation of PGC-1 coactivator pathways in brown fat differentiation through LRP130. J. Biol. Chem. 283, 31960-31967
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 31960-31967
-
-
Cooper, M.P.1
Uldry, M.2
Kajimura, S.3
Arany, Z.4
Spiegelman, B.M.5
-
77
-
-
77955420680
-
LRPPRC is a mitochondrial matrix protein that is conserved in metazoans
-
Sterky, F. H., Ruzzenente, B., Gustafsson, C. M., Samuelsson, T. and Larsson, N. G. (2010) LRPPRC is a mitochondrial matrix protein that is conserved in metazoans. Biochem. Biophys. Res. Commun. 398, 759-764
-
(2010)
Biochem. Biophys. Res. Commun.
, vol.398
, pp. 759-764
-
-
Sterky, F.H.1
Ruzzenente, B.2
Gustafsson, C.M.3
Samuelsson, T.4
Larsson, N.G.5
-
78
-
-
33744541544
-
SLIRP, a Small SRA Binding Protein, Is a Nuclear Receptor Corepressor
-
DOI 10.1016/j.molcel.2006.05.024, PII S109727650600339X
-
Hatchell, E. C., Colley, S. M., Beveridge, D. J., Epis, M. R., Stuart, L. M., Giles, K. M., Redfern, A. D., Miles, L. E., Barker, A., MacDonald, L. M. et al. (2006) SLIRP, a small SRA binding protein, is a nuclear receptor corepressor. Mol. Cell 22, 657-668 (Pubitemid 43817609)
-
(2006)
Molecular Cell
, vol.22
, Issue.5
, pp. 657-668
-
-
Hatchell, E.C.1
Colley, S.M.2
Beveridge, D.J.3
Epis, M.R.4
Stuart, L.M.5
Giles, K.M.6
Redfern, A.D.7
Miles, L.E.C.8
Barker, A.9
MacDonald, L.M.10
Arthur, P.G.11
Lui, J.C.K.12
Golding, J.L.13
McCulloch, R.K.14
Metcalf, C.B.15
Wilce, J.A.16
Wilce, M.C.J.17
Lanz, R.B.18
O'Malley, B.W.19
Leedman, P.J.20
more..
-
79
-
-
67849130819
-
A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis
-
Baughman, J. M., Nilsson, R., Gohil, V. M., Arlow, D. H., Gauhar, Z. and Mootha, V. K. (2009) A computational screen for regulators of oxidative phosphorylation implicates SLIRP in mitochondrial RNA homeostasis. PLoS Genet. 5, e1000590
-
(2009)
PLoS Genet.
, vol.5
-
-
Baughman, J.M.1
Nilsson, R.2
Gohil, V.M.3
Arlow, D.H.4
Gauhar, Z.5
Mootha, V.K.6
-
80
-
-
0036629250
-
rRNA modifications and ribosome function
-
DOI 10.1016/S0968-0004(02)02109-6, PII S0968000402021096
-
Decatur, W. A. and Fournier, M. J. (2002) rRNA modifications and ribosome function. Trends Biochem Sci. 27, 344-351 (Pubitemid 34756517)
-
(2002)
Trends in Biochemical Sciences
, vol.27
, Issue.7
, pp. 344-351
-
-
Decatur, W.A.1
Fournier, M.J.2
-
81
-
-
80755169463
-
Human mitochondrial tRNAs: Biogenesis, function, structural aspects, and diseases
-
Suzuki, T. and Nagao, A. (2011) Human mitochondrial tRNAs: biogenesis, function, structural aspects, and diseases. Annu. Rev. Genet. 45, 299-329
-
(2011)
Annu. Rev. Genet.
, vol.45
, pp. 299-329
-
-
Suzuki, T.1
Nagao, A.2
-
82
-
-
77952560288
-
Unique features of animal mitochondrial translation systems. The non-universal genetic code, unusual features of the translational apparatus and their relevance to human mitochondrial diseases
-
Watanabe, K. (2010) Unique features of animal mitochondrial translation systems. The non-universal genetic code, unusual features of the translational apparatus and their relevance to human mitochondrial diseases. Proc. Jpn. Acad. Ser. B Phys. Biol. Sci. 86, 11-39
-
(2010)
Proc. Jpn. Acad. Ser. B Phys. Biol. Sci.
, vol.86
, pp. 11-39
-
-
Watanabe, K.1
-
83
-
-
59449106678
-
Specific features of 5S rRNA structure: Its interactions with macromolecules and possible functions
-
Smirnov, A. V., Entelis, N. S., Krasheninnikov, I. A., Martin, R. and Tarassov, I. A. (2008) Specific features of 5S rRNA structure: its interactions with macromolecules and possible functions. Biochemistry 73, 1418-1437
-
(2008)
Biochemistry
, vol.73
, pp. 1418-1437
-
-
Smirnov, A.V.1
Entelis, N.S.2
Krasheninnikov, I.A.3
Martin, R.4
Tarassov, I.A.5
-
84
-
-
0019495572
-
Synthesis and turnover of mitochondrial ribonucleic acid in HeLa cells: The mature ribosomal and messenger ribonucleic acid species are metabolically unstable
-
Gelfand, R. and Attardi, G. (1981) Synthesis and turnover of mitochondrial ribonucleic acid in HeLa cells: the mature ribosomal and messenger ribonucleic acid species are metabolically unstable. Mol. Cell. Biol. 1, 497-511 (Pubitemid 11035829)
-
(1981)
Molecular and Cellular Biology
, vol.1
, Issue.6
, pp. 497-511
-
-
Gelfand, R.1
Attardi, G.2
-
85
-
-
34250377197
-
The weird and wonderful world of bacterial ribosome regulation
-
DOI 10.1080/10409230701360843, PII 779479355
-
Wilson, D. N. and Nierhaus, K. H. (2007) The weird and wonderful world of bacterial ribosome regulation. Crit. Rev. Biochem. Mol. Biol. 42, 187-219 (Pubitemid 46911961)
-
(2007)
Critical Reviews in Biochemistry and Molecular Biology
, vol.42
, Issue.3
, pp. 187-219
-
-
Wilson, D.N.1
Nierhaus, K.H.2
-
86
-
-
0033367325
-
Ribosome synthesis in Saccharomyces cerevisiae
-
DOI 10.1146/annurev.genet.33.1.261
-
Venema, J. and Tollervey, D. (1999) Ribosome synthesis in Saccharomyces cerevisiae. Annu. Rev. Genet. 33, 261-311 (Pubitemid 30083125)
-
(1999)
Annual Review of Genetics
, vol.33
, pp. 261-311
-
-
Venema, J.1
Tollervey, D.2
-
88
-
-
38549164687
-
The 3D rRNA modification maps database: With interactive tools for ribosome analysis
-
Piekna-Przybylska, D., Decatur, W. A. and Fournier, M. J. (2008) The 3D rRNA modification maps database: with interactive tools for ribosome analysis. Nucleic Acids Res. 36, D178-D83
-
(2008)
Nucleic Acids Res.
, vol.36
-
-
Piekna-Przybylska, D.1
Decatur, W.A.2
Fournier, M.J.3
-
89
-
-
0028932720
-
Implications of a functional large ribosomal RNA with only three modified nucleotides
-
Sirum-Connolly, K., Peltier, J. M., Crain, P. F., McCloskey, J. A. and Mason, T. L. (1995) Implications of a functional large ribosomal RNA with only three modified nucleotides. Biochimie 77, 30-39
-
(1995)
Biochimie
, vol.77
, pp. 30-39
-
-
Sirum-Connolly, K.1
Peltier, J.M.2
Crain, P.F.3
McCloskey, J.A.4
Mason, T.L.5
-
90
-
-
77956658496
-
Human ERAL1 is a mitochondrial RNA chaperone involved in the assembly of the 28S small mitochondrial ribosomal subunit
-
Dennerlein, S., Rozanska, A., Wydro, M., Chrzanowska-Lightowlers, Z. M. and Lightowlers, R. N. (2010) Human ERAL1 is a mitochondrial RNA chaperone involved in the assembly of the 28S small mitochondrial ribosomal subunit. Biochem. J. 430, 551-558
-
(2010)
Biochem. J.
, vol.430
, pp. 551-558
-
-
Dennerlein, S.1
Rozanska, A.2
Wydro, M.3
Chrzanowska-Lightowlers, Z.M.4
Lightowlers, R.N.5
-
91
-
-
77956539977
-
ERAL1 is associated with mitochondrial ribosome and elimination of ERAL1 leads to mitochondrial dysfunction and growth retardation
-
Uchiumi, T., Ohgaki, K., Yagi, M., Aoki, Y., Sakai, A., Matsumoto, S. and Kang, D. (2010) ERAL1 is associated with mitochondrial ribosome and elimination of ERAL1 leads to mitochondrial dysfunction and growth retardation. Nucleic Acids Res. 38, 5554-5568
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5554-5568
-
-
Uchiumi, T.1
Ohgaki, K.2
Yagi, M.3
Aoki, Y.4
Sakai, A.5
Matsumoto, S.6
Kang, D.7
-
92
-
-
67349234111
-
Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation
-
Davies, S. M., Rackham, O., Shearwood, A. M., Hamilton, K. L., Narsai, R., Whelan, J. and Filipovska, A. (2009) Pentatricopeptide repeat domain protein 3 associates with the mitochondrial small ribosomal subunit and regulates translation. FEBS Lett. 583, 1853-1858
-
(2009)
FEBS Lett.
, vol.583
, pp. 1853-1858
-
-
Davies, S.M.1
Rackham, O.2
Shearwood, A.M.3
Hamilton, K.L.4
Narsai, R.5
Whelan, J.6
Filipovska, A.7
-
93
-
-
0037345834
-
RNA-binding proteins of mammalian mitochondria
-
DOI 10.1016/S1567-7249(03)00005-9, PII S1567724903000059
-
Koc, E. C. and Spremulli, L. L. (2003) RNA-binding proteins of mammalian mitochondria. Mitochondrion 2, 277-291 (Pubitemid 36342349)
-
(2003)
Mitochondrion
, vol.2
, Issue.4
, pp. 277-291
-
-
Koc, E.C.1
Spremulli, L.L.2
-
94
-
-
80054966979
-
Contacts between mammalian mitochondrial translational initiation factor 3 and ribosomal proteins in the small subunit
-
Haque, M. E., Koc, H., Cimen, H., Koc, E. C. and Spremulli, L. L. (2011) Contacts between mammalian mitochondrial translational initiation factor 3 and ribosomal proteins in the small subunit. Biochim. Biophys. Acta 1814, 1779-1784
-
(2011)
Biochim. Biophys. Acta
, vol.1814
, pp. 1779-1784
-
-
Haque, M.E.1
Koc, H.2
Cimen, H.3
Koc, E.C.4
Spremulli, L.L.5
-
95
-
-
84861392482
-
C7orf30 is necessary for biogenesis of the large subunit of the mitochondrial ribosome
-
doi:10.1093/nar/gkr1282
-
Rorbach, J., Gammage, P. A. and Minczuk, M. (2012) C7orf30 is necessary for biogenesis of the large subunit of the mitochondrial ribosome. Nucleic Acids Res., doi:10.1093/nar/gkr1282
-
(2012)
Nucleic Acids Res.
-
-
Rorbach, J.1
Gammage, P.A.2
Minczuk, M.3
-
96
-
-
71749091518
-
Pentatricopeptide repeat domain protein 1 lowers the levels of mitochondrial leucine tRNAs in cells
-
Rackham, O., Davies, S. M., Shearwood, A. M., Hamilton, K. L., Whelan, J. and Filipovska, A. (2009) Pentatricopeptide repeat domain protein 1 lowers the levels of mitochondrial leucine tRNAs in cells. Nucleic Acids Res. 37, 5859-5867
-
(2009)
Nucleic Acids Res.
, vol.37
, pp. 5859-5867
-
-
Rackham, O.1
Davies, S.M.2
Shearwood, A.M.3
Hamilton, K.L.4
Whelan, J.5
Filipovska, A.6
-
97
-
-
80052395499
-
RNA processing in human mitochondria
-
Lopez Sanchez, M. I., Mercer, T. R., Davies, S. M., Shearwood, A. M., Nygard, K. K., Richman, T. R., Mattick, J. S., Rackham, O. and Filipovska, A. (2011) RNA processing in human mitochondria. Cell Cycle 10, 2904-2916
-
(2011)
Cell Cycle
, vol.10
, pp. 2904-2916
-
-
Lopez Sanchez, M.I.1
Mercer, T.R.2
Davies, S.M.3
Shearwood, A.M.4
Nygard, K.K.5
Richman, T.R.6
Mattick, J.S.7
Rackham, O.8
Filipovska, A.9
-
98
-
-
0016248247
-
Methylated nucleotide content of mitochondrial ribosomal RNA from hamster cells
-
Dubin, D. T. (1974) Methylated nucleotide content of mitochondrial ribosomal RNA from hamster cells. J. Mol. Biol. 84, 257-273
-
(1974)
J. Mol. Biol.
, vol.84
, pp. 257-273
-
-
Dubin, D.T.1
-
99
-
-
0017881089
-
Modification of mitochondrial ribosomal RNA from hamster cells: The presence of GmG and late-methylated UmGmU in the large subunit (17S)RNA
-
Dubin, D. T. and Taylor, R. H. (1978) Modification of mitochondrial ribosomal RNA from hamster cells: the presence of GmG and late-methylated UmGmU in the large subunit (17S) RNA. J. Mol. Biol. 121, 523-540 (Pubitemid 8365628)
-
(1978)
Journal of Molecular Biology
, vol.121
, Issue.4
, pp. 523-540
-
-
Dubin, D.T.1
Taylor, R.H.2
-
100
-
-
0019322659
-
The 3′-terminal sequence of the small subunit ribosomal RNA from hamster mitochondria
-
Baer, R. and Dubin, D. T. (1980) The 3′-terminal sequence of the small subunit ribosomal RNA from hamster mitochondria. Nucleic Acids Res. 8, 4927-4941
-
(1980)
Nucleic Acids Res.
, vol.8
, pp. 4927-4941
-
-
Baer, R.1
Dubin, D.T.2
-
101
-
-
0019887180
-
Methylated regions of hamster mitochondrial ribosomal RNA: Structural and functional correlates
-
Baer, R. J. and Dubin, D. T. (1981) Methylated regions of hamster mitochondrial ribosomal RNA: structural and functional correlates. Nucleic Acids Res. 9, 323-337
-
(1981)
Nucleic Acids Res.
, vol.9
, pp. 323-337
-
-
Baer, R.J.1
Dubin, D.T.2
-
102
-
-
0037228525
-
Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop
-
Seidel-Rogol, B. L., McCulloch, V. and Shadel, G. S. (2003) Human mitochondrial transcription factor B1 methylates ribosomal RNA at a conserved stem-loop. Nat. Genet. 33, 23-24
-
(2003)
Nat. Genet.
, vol.33
, pp. 23-24
-
-
Seidel-Rogol, B.L.1
McCulloch, V.2
Shadel, G.S.3
-
103
-
-
0036648997
-
Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA
-
Falkenberg, M., Gaspari, M., Rantanen, A., Trifunovic, A., Larsson, N. G. and Gustafsson, C. M. (2002) Mitochondrial transcription factors B1 and B2 activate transcription of human mtDNA. Nat. Genet. 31, 289-294
-
(2002)
Nat. Genet.
, vol.31
, pp. 289-294
-
-
Falkenberg, M.1
Gaspari, M.2
Rantanen, A.3
Trifunovic, A.4
Larsson, N.G.5
Gustafsson, C.M.6
-
104
-
-
0036148610
-
A human mitochondrial transcription factor is related to RNA adenine methyltransferases and binds S-adenosylmethionine
-
DOI 10.1128/MCB.22.4.1116-1125.2002
-
McCulloch, V., Seidel-Rogol, B. L. and Shadel, G. S. (2002) A human mitochondrial transcription factor is related to RNA adenine methyltransferases and binds S-adenosylmethionine. Mol. Cell. Biol. 22, 1116-1125 (Pubitemid 34094848)
-
(2002)
Molecular and Cellular Biology
, vol.22
, Issue.4
, pp. 1116-1125
-
-
McCulloch, V.1
Seidel-Rogol, B.L.2
Shadel, G.S.3
-
105
-
-
33751521683
-
Evidence for an early gene duplication event in the evolution of the mitochondrial transcription factor B family and maintenance of rRNA methyltransferase activity in human mtTFB1 and mtTFB2
-
DOI 10.1007/s00239-006-0075-1
-
Cotney, J. and Shadel, G. S. (2006) Evidence for an early gene duplication event in the evolution of the mitochondrial transcription factor B family and maintenance of rRNA methyltransferase activity in human mtTFB1 and mtTFB2. J. Mol. Evol. 63, 707-717 (Pubitemid 44833232)
-
(2006)
Journal of Molecular Evolution
, vol.63
, Issue.5
, pp. 707-717
-
-
Cotney, J.1
Shadel, G.S.2
-
106
-
-
77953529585
-
A compendium of human mitochondrial gene expression machinery with links to disease
-
Shutt, T. E. and Shadel, G. S. (2010) A compendium of human mitochondrial gene expression machinery with links to disease. Environ. Mol. Mutagen. 51, 360-379
-
(2010)
Environ. Mol. Mutagen.
, vol.51
, pp. 360-379
-
-
Shutt, T.E.1
Shadel, G.S.2
-
107
-
-
63449105579
-
Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome
-
Metodiev, M. D., Lesko, N., Park, C. B., Camara, Y., Shi, Y., Wibom, R., Hultenby, K., Gustafsson, C. M. and Larsson, N. G. (2009) Methylation of 12S rRNA is necessary for in vivo stability of the small subunit of the mammalian mitochondrial ribosome. Cell Metab. 9, 386-397
-
(2009)
Cell Metab.
, vol.9
, pp. 386-397
-
-
Metodiev, M.D.1
Lesko, N.2
Park, C.B.3
Camara, Y.4
Shi, Y.5
Wibom, R.6
Hultenby, K.7
Gustafsson, C.M.8
Larsson, N.G.9
-
108
-
-
20444458289
-
Drosophila mitochondrial transcription factor B1 modulates mitochondrial translation but not transcription or DNA copy number in Schneider cells
-
DOI 10.1074/jbc.M500569200
-
Matsushima, Y., Adan, C., Garesse, R. and Kaguni, L. S. (2005) Drosophila mitochondrial transcription factor B1 modulates mitochondrial translation but not transcription or DNA copy number in Schneider cells. J. Biol. Chem. 280, 16815-16820 (Pubitemid 41389140)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.17
, pp. 16815-16820
-
-
Matsushima, Y.1
Adan, C.2
Garesse, R.3
Kaguni, L.S.4
-
109
-
-
0031944479
-
Yeast 18S rRNA dimethylase Dim1p: A quality control mechanism in ribosome synthesis?
-
Lafontaine, D. L., Preiss, T. and Tollervey, D. (1998) Yeast 18S rRNA dimethylase Dim1p: a quality control mechanism in ribosome synthesis? Mol. Cell. Biol. 18, 2360-2370 (Pubitemid 28152682)
-
(1998)
Molecular and Cellular Biology
, vol.18
, Issue.4
, pp. 2360-2370
-
-
Lafontaine, D.L.J.1
Preiss, T.2
Tollervey, D.3
-
110
-
-
0018868238
-
6-dimethyladenosines near the 3' end of 16 S ribosomal RNA of Escherichia coli. IV. The effect of the methylgroups on ribosomal subunit interaction
-
Poldermans, B., Bakker, H. and Van Knippenberg, P. H. (1980) Studies on the function of two adjacent N6,N6-dimethyladenosines near the 3′ end of 16S ribosomal RNA of Escherichia coli. IV. The effect of the methylgroups on ribosomal subunit interaction. Nucleic Acids Res. 8, 143-151 (Pubitemid 10154679)
-
(1980)
Nucleic Acids Research
, vol.8
, Issue.1
, pp. 143-151
-
-
Poldermans, B.1
Bakker, H.2
Van Knippenberg, P.H.3
-
111
-
-
43249093216
-
A conserved rRNA methyltransferase regulates ribosome biogenesis
-
DOI 10.1038/nsmb.1408, PII NSMB1408
-
Xu, Z., O'Farrell, H. C., Rife, J. P. and Culver, G. M. (2008) A conserved rRNA methyltransferase regulates ribosome biogenesis. Nat. Struct. Mol. Biol. 15, 534-536 (Pubitemid 351653583)
-
(2008)
Nature Structural and Molecular Biology
, vol.15
, Issue.5
, pp. 534-536
-
-
Xu, Z.1
O'Farrell, H.C.2
Rife, J.P.3
Culver, G.M.4
-
112
-
-
78649652763
-
Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function
-
Demirci, H., Murphy, F. T., Belardinelli, R., Kelley, A. C., Ramakrishnan, V., Gregory, S. T., Dahlberg, A. E. and Jogl, G. (2010) Modification of 16S ribosomal RNA by the KsgA methyltransferase restructures the 30S subunit to optimize ribosome function. RNA 16, 2319-2324
-
(2010)
RNA
, vol.16
, pp. 2319-2324
-
-
Demirci, H.1
Murphy, F.T.2
Belardinelli, R.3
Kelley, A.C.4
Ramakrishnan, V.5
Gregory, S.T.6
Dahlberg, A.E.7
Jogl, G.8
-
113
-
-
77950361036
-
Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA
-
Kimura, S. and Suzuki, T. (2010) Fine-tuning of the ribosomal decoding center by conserved methyl-modifications in the Escherichia coli 16S rRNA. Nucleic Acids Res. 38, 1341-1352
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 1341-1352
-
-
Kimura, S.1
Suzuki, T.2
-
114
-
-
79955633747
-
MTERF4 regulates translation by targeting the methyltransferase NSUN4 to the mammalian mitochondrial ribosome
-
Camara, Y., Asin-Cayuela, J., Park, C. B., Metodiev, M. D., Shi, Y., Ruzzenente, B., Kukat, C., Habermann, B., Wibom, R., Hultenby, K. et al. (2011) MTERF4 regulates translation by targeting the methyltransferase NSUN4 to the mammalian mitochondrial ribosome. Cell Metab. 13, 527-39
-
(2011)
Cell Metab.
, vol.13
, pp. 527-539
-
-
Camara, Y.1
Asin-Cayuela, J.2
Park, C.B.3
Metodiev, M.D.4
Shi, Y.5
Ruzzenente, B.6
Kukat, C.7
Habermann, B.8
Wibom, R.9
Hultenby, K.10
-
115
-
-
33646806139
-
5C Methyltransferase Specific for 16 S rRNA Nucleotide 1407
-
DOI 10.1016/j.jmb.2006.04.007, PII S0022283606004566
-
Andersen, N. M. and Douthwaite, S. (2006) YebU is a m5C methyltransferase specific for 16 S rRNA nucleotide 1407. J. Mol. Biol. 359, 777-786 (Pubitemid 43767262)
-
(2006)
Journal of Molecular Biology
, vol.359
, Issue.3
, pp. 777-786
-
-
Andersen, N.M.1
Douthwaite, S.2
-
116
-
-
79952088991
-
Site-directed mutants of 16S rRNA reveal important RNA domains for KsgA function and 30S subunit assembly
-
Desai, P. M., Culver, G. M. and Rife, J. P. (2011) Site-directed mutants of 16S rRNA reveal important RNA domains for KsgA function and 30S subunit assembly. Biochemistry 50, 854-863
-
(2011)
Biochemistry
, vol.50
, pp. 854-863
-
-
Desai, P.M.1
Culver, G.M.2
Rife, J.P.3
-
117
-
-
78651104165
-
NOA1 is an essential GTPase required for mitochondrial protein synthesis
-
Kolanczyk, M., Pech, M., Zemojtel, T., Yamamoto, H., Mikula, I., Calvaruso, M. A., van den Brand, M., Richter, R., Fischer, B., Ritz, A. et al. (2011) NOA1 is an essential GTPase required for mitochondrial protein synthesis. Mol. Biol. Cell 22, 1-11
-
(2011)
Mol. Biol. Cell
, vol.22
, pp. 1-11
-
-
Kolanczyk, M.1
Pech, M.2
Zemojtel, T.3
Yamamoto, H.4
Mikula, I.5
Calvaruso, M.A.6
Van Den Brand, M.7
Richter, R.8
Fischer, B.9
Ritz, A.10
-
118
-
-
33645050402
-
The essential GTPase RbgA (YlqF) is required for 50S ribosome assembly in Bacillus subtilis
-
Uicker, W. C., Schaefer, L. and Britton, R. A. (2006) The essential GTPase RbgA (YlqF) is required for 50S ribosome assembly in Bacillus subtilis. Mol. Microbiol. 59, 528-540
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 528-540
-
-
Uicker, W.C.1
Schaefer, L.2
Britton, R.A.3
-
119
-
-
0038308501
-
MTG1 codes for a conserved protein required for mitochondrial translation
-
DOI 10.1091/mbc.E02-10-0636
-
Barrientos, A., Korr, D., Barwell, K. J., Sjulsen, C., Gajewski, C. D., Manfredi, G., Ackerman, S. and Tzagoloff, A. (2003) MTG1 codes for a conserved protein required for mitochondrial translation. Mol. Biol. Cell 14, 2292-2302 (Pubitemid 36724321)
-
(2003)
Molecular Biology of the Cell
, vol.14
, Issue.6
, pp. 2292-2302
-
-
Barrientos, A.1
Korr, D.2
Barwell, K.J.3
Sjulsen, C.4
Gajewski, C.D.5
Manfredi, G.6
Ackerman, S.7
Tzagoloff, A.8
-
120
-
-
26844484821
-
The m-AAA protease defective in hereditary spastic paraplegia controls ribosome assembly in mitochondria
-
DOI 10.1016/j.cell.2005.08.003, PII S0092867405008068
-
Nolden, M., Ehses, S., Koppen, M., Bernacchia, A., Rugarli, E. I. and Langer, T. (2005) The m-AAA protease defective in hereditary spastic paraplegia controls ribosome assembly in mitochondria. Cell 123, 277-289 (Pubitemid 41457217)
-
(2005)
Cell
, vol.123
, Issue.2
, pp. 277-289
-
-
Nolden, M.1
Ehses, S.2
Koppen, M.3
Bernacchia, A.4
Rugarli, E.I.5
Langer, T.6
-
121
-
-
84861414389
-
C7orf30 specifically associates with the large subunit of the mitochondrial ribosome and is involved in translation
-
doi: 10.1093/nar/gkr1271
-
Wanschers, B.F.J., Szklarczyk, R., Pajak, A., van den Brand, M.A.M., Gloerich, J., Rodenburg, R.J.T., Lightowlers, R. N., Nijtmans., L. G. and Huynen, M. A. (2012) C7orf30 specifically associates with the large subunit of the mitochondrial ribosome and is involved in translation. Nucleic Acids Res., doi: 10.1093/nar/gkr1271
-
(2012)
Nucleic Acids Res.
-
-
Wanschers, B.F.J.1
Szklarczyk, R.2
Pajak, A.3
Van Den Brand, M.A.M.4
Gloerich, J.5
Rodenburg, R.J.T.6
Lightowlers, R.N.7
Nijtmans, L.G.8
Huynen, M.A.9
-
122
-
-
0027752458
-
Functional requirement of a site-specific ribose methylation in ribosomal RNA
-
Sirum-Connolly, K. and Mason, T. L. (1993) Functional requirement of a site-specific ribose methylation in ribosomal RNA. Science 262, 1886-1889 (Pubitemid 24041862)
-
(1993)
Science
, vol.262
, Issue.5141
, pp. 1886-1889
-
-
Sirum-Connolly, K.1
Mason, T.L.2
-
123
-
-
0035162971
-
The rlmB gene is essential for formation of Gm2251 in 23S rRNA but not for ribosome maturation in Escherichia coli
-
DOI 10.1128/JB.183.23.6957-6960.2001
-
Lovgren, J. M. and Wikstrom, P. M. (2001) The rlmB gene is essential for formation of Gm2251 in 23S rRNA but not for ribosome maturation in Escherichia coli. J. Bacteriol. 183, 6957-6960 (Pubitemid 33064212)
-
(2001)
Journal of Bacteriology
, vol.183
, Issue.23
, pp. 6957-6960
-
-
Lovgren, J.M.1
Wikstrom, P.M.2
-
124
-
-
0036500548
-
MRM2 encodes a novel yeast mitochondrial 21s rRNA methyltransferase
-
DOI 10.1093/emboj/21.5.1139
-
Pintard, L., Bujnicki, J. M., Lapeyre, B. and Bonnerot, C. (2002) MRM2 encodes a novel yeast mitochondrial 21S rRNA methyltransferase. EMBO J. 21, 1139-1147 (Pubitemid 34206187)
-
(2002)
EMBO Journal
, vol.21
, Issue.5
, pp. 1139-1147
-
-
Pintard, L.1
Bujnicki, J.M.2
Lapeyre, B.3
Bonnerot, C.4
-
125
-
-
0034685640
-
2552 23S ribosomal RNA methyltransferase RrmJ/FTSJ
-
DOI 10.1006/bbrc.2000.2702
-
Caldas, T., Binet, E., Bouloc, P. and Richarme, G. (2000) Translational defects of Escherichia coli mutants deficient in the Um2552 23S ribosomal RNA methyltransferase RrmJ/FTSJ. Biochem. Biophys. Res. Commun. 271, 714-718 (Pubitemid 30444694)
-
(2000)
Biochemical and Biophysical Research Communications
, vol.271
, Issue.3
, pp. 714-718
-
-
Caldas, T.1
Binet, E.2
Bouloc, P.3
Richarme, G.4
-
126
-
-
0034596029
-
The FtsJ/RrmJ heat shock protein of Escherichia coli is a 23 S ribosomal RNA methyltransferase
-
DOI 10.1074/jbc.M001854200
-
Caldas, T., Binet, E., Bouloc, P., Costa, A., Desgres, J. and Richarme, G. (2000) The FtsJ/RrmJ heat shock protein of Escherichia coli is a 23 S ribosomal RNA methyltransferase. J. Biol. Chem. 275, 16414-16419 (Pubitemid 30398860)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.22
, pp. 16414-16419
-
-
Caldas, T.1
Binet, E.2
Bouloc, P.3
Costa, A.4
Desgres, J.5
Richarme, G.6
-
127
-
-
14844297380
-
U2552 methylation at the ribosomal A-site is a negative modulator of translational accuracy
-
DOI 10.1016/j.gene.2004.12.025
-
Widerak, M., Kern, R., Malki, A. and Richarme, G. (2005) U2552 methylation at the ribosomal A-site is a negative modulator of translational accuracy. Gene 347, 109-114 (Pubitemid 40348705)
-
(2005)
Gene
, vol.347
, Issue.1
, pp. 109-114
-
-
Widerak, M.1
Kern, R.2
Malki, A.3
Richarme, G.4
-
128
-
-
0033231562
-
Base-pairing between 23S rRNA and tRNA in the ribosomal A site
-
Kim, D. F. and Green, R. (1999) Base-pairing between 23S rRNA and tRNA in the ribosomal A site. Mol. Cell 4, 859-864
-
(1999)
Mol. Cell
, vol.4
, pp. 859-864
-
-
Kim, D.F.1
Green, R.2
-
129
-
-
8844219672
-
2922 in the ribosome catalytic center occurs at a late processing stage
-
DOI 10.1016/j.molcel.2004.10.022, PII S1097276504006483
-
Lapeyre, B. and Purushothaman, S. K. (2004) Spb1p-directed formation of Gm2922 in the ribosome catalytic center occurs at a late processing stage. Mol. Cell 16, 663-669 (Pubitemid 39531888)
-
(2004)
Molecular Cell
, vol.16
, Issue.4
, pp. 663-669
-
-
Lapeyre, B.1
Purushothaman, S.K.2
-
130
-
-
0031581856
-
Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts
-
DOI 10.1006/jmbi.1996.0737
-
Ofengand, J. and Bakin, A. (1997) Mapping to nucleotide resolution of pseudouridine residues in large subunit ribosomal RNAs from representative eukaryotes, prokaryotes, archaebacteria, mitochondria and chloroplasts. J. Mol. Biol. 266, 246-268 (Pubitemid 27171012)
-
(1997)
Journal of Molecular Biology
, vol.266
, Issue.2
, pp. 246-268
-
-
Ofengand, J.1
Bakin, A.2
-
131
-
-
0034193118
-
2819 in 21S mitochondrial ribosomal RNA
-
Ansmant, I., Massenet, S., Grosjean, H., Motorin, Y. and Branlant, C. (2000) Identification of the Saccharomyces cerevisiae RNA:pseudouridine synthase responsible for formation of ψ2819 in 21S mitochondrial ribosomal RNA. Nucleic Acids Res. 28, 1941-1946 (Pubitemid 30229660)
-
(2000)
Nucleic Acids Research
, vol.28
, Issue.9
, pp. 1941-1946
-
-
Ansmant, I.1
Massenet, S.2
Grosjean, H.3
Motorin, Y.4
Branlant, C.5
-
132
-
-
85011942140
-
The eukaryotic RNA exosome: Same scaffold but variable catalytic subunits
-
Lykke-Andersen, S., Tomecki, R., Jensen, T. H. and Dziembowski, A. (2011) The eukaryotic RNA exosome: same scaffold but variable catalytic subunits. RNA Biol. 8, 61-66
-
(2011)
RNA Biol.
, vol.8
, pp. 61-66
-
-
Lykke-Andersen, S.1
Tomecki, R.2
Jensen, T.H.3
Dziembowski, A.4
-
133
-
-
0036549769
-
The Escherichia coli RNA degradosome: Structure, function and relationship in other ribonucleolytic multienzyme complexes
-
Carpousis, A. J. (2002) The Escherichia coli RNA degradosome: structure, function and relationship in other ribonucleolytic multienzyme complexes. Biochem. Soc. Trans. 30, 150-155
-
(2002)
Biochem. Soc. Trans.
, vol.30
, pp. 150-155
-
-
Carpousis, A.J.1
-
134
-
-
0029089849
-
The novel nuclear gene DSS-1 of Saccharomyces cerevisiae is necessary for mitochondrial biogenesis
-
Dmochowska, A., Golik, P. and Stepien, P. P. (1995) The novel nuclear gene DSS-1 of Saccharomyces cerevisiae is necessary for mitochondrial biogenesis. Curr. Genet. 28, 108-112
-
(1995)
Curr. Genet.
, vol.28
, pp. 108-112
-
-
Dmochowska, A.1
Golik, P.2
Stepien, P.P.3
-
135
-
-
0037449772
-
The yeast mitochondrial degradosome: Its composition, interplay between RNA helicase and RNase activities and the role in mitochondrial RNA metabolism
-
DOI 10.1074/jbc.M208287200
-
Dziembowski, A., Piwowarski, J., Hoser, R., Minczuk, M., Dmochowska, A., Siep, M., van der Spek, H., Grivell, L. and Stepien, P. P. (2003) The yeast mitochondrial degradosome. Its composition, interplay between RNA helicase and RNase activities and the role in mitochondrial RNA metabolism. J. Biol. Chem. 278, 1603-1611 (Pubitemid 36801390)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.3
, pp. 1603-1611
-
-
Dziembowski, A.1
Piwowarski, J.2
Hoser, R.3
Minczuk, M.4
Dmochowska, A.5
Siep, M.6
Van Der, S.H.7
Grivell, L.8
Stepien, P.P.9
-
136
-
-
34547683820
-
In vitro Reconstitution and Characterization of the Yeast Mitochondrial Degradosome Complex Unravels Tight Functional Interdependence
-
DOI 10.1016/j.jmb.2007.06.074, PII S0022283607008856
-
Malecki, M., Jedrzejczak, R., Stepien, P. P. and Golik, P. (2007) In vitro reconstitution and characterization of the yeast mitochondrial degradosome complex unravels tight functional interdependence. J. Mol. Biol. 372, 23-36 (Pubitemid 47223232)
-
(2007)
Journal of Molecular Biology
, vol.372
, Issue.1
, pp. 23-36
-
-
Malecki, M.1
Jedrzejczak, R.2
Stepien, P.P.3
Golik, P.4
-
137
-
-
0030034498
-
The DExH box protein Suv3p is a component of a yeast mitochondrial 3′-to-5′ exoribonuclease that suppresses group I intron toxicity
-
Margossian, S. P., Li, H., Zassenhaus, H. P. and Butow, R. A. (1996) The DExH box protein Suv3p is a component of a yeast mitochondrial 3′-to-5′ exoribonuclease that suppresses group I intron toxicity. Cell 84, 199-209
-
(1996)
Cell
, vol.84
, pp. 199-209
-
-
Margossian, S.P.1
Li, H.2
Zassenhaus, H.P.3
Butow, R.A.4
-
138
-
-
0031725399
-
The yeast nuclear gene DSS1, which codes for a putative RNase II, is necessary for the function of the mitochondrial degradosome in processing and turnover of RNA
-
DOI 10.1007/s004380050876
-
Dziembowski, A., Malewicz, M., Minczuk, M., Golik, P., Dmochowska, A. and Stepien, P. P. (1998) The yeast nuclear gene DSS1, which codes for a putative RNase II, is necessary for the function of the mitochondrial degradosome in processing and turnover of RNA. Mol. Gen. Genet. 260, 108-114 (Pubitemid 28502227)
-
(1998)
Molecular and General Genetics
, vol.260
, Issue.1
, pp. 108-114
-
-
Dziembowski, A.1
Malewicz, M.2
Minczuk, M.3
Golik, P.4
Dmochowska, A.5
Stepien, P.P.6
-
139
-
-
0032617822
-
A human putative Suv3-like RNA helicase is conserved between Rhodobacter and all eukaryotes
-
Dmochowska, A., Kalita, K., Krawczyk, M., Golik, P., Mroczek, K., Lazowska, J., Stepien, P. P. and Bartnik, E. (1999) A human putative Suv3-like RNA helicase is conserved between Rhodobacter and all eukaryotes. Acta Biochim. Pol. 46, 155-162 (Pubitemid 129541539)
-
(1999)
Acta Biochimica Polonica
, vol.46
, Issue.1
, pp. 155-162
-
-
Dmochowska, A.1
Kalita, K.2
Krawczyk, M.3
Golik, P.4
Mroczek, K.5
Lazowska, J.6
Stepien, P.P.7
Bartnik, E.8
-
140
-
-
0036929748
-
Localisation of the human hSuv3p helicase in the mitochondrial matrix and its preferential unwinding of dsDNA
-
DOI 10.1093/nar/gkf647
-
Minczuk, M., Piwowarski, J., Papworth, M. A., Awiszus, K., Schalinski, S., Dziembowski, A., Dmochowska, A., Bartnik, E., Tokatlidis, K., Stepien, P. P. and Borowski, P. (2002) Localisation of the human hSuv3p helicase in the mitochondrial matrix and its preferential unwinding of dsDNA. Nucleic Acids Res. 30, 5074-5086 (Pubitemid 36033024)
-
(2002)
Nucleic Acids Research
, vol.30
, Issue.23
, pp. 5074-5086
-
-
Minczuk, M.1
Piwowarski, J.2
Papworth, M.A.3
Awiszus, K.4
Schalinski, S.5
Dziembowski, A.6
Dmochowska, A.7
Bartnik, E.8
Tokatlidis, K.9
Stepien, P.P.10
Borowski, P.11
-
141
-
-
33748746678
-
Human mitochondrial DNA nucleoids are linked to protein folding machinery and metabolic enzymes at the mitochondrial inner membrane
-
DOI 10.1074/jbc.M604501200
-
Wang, Y. and Bogenhagen, D. F. (2006) Human mitochondrial DNA nucleoids are linked to protein folding machinery and metabolic enzymes at the mitochondrial inner membrane. J. Biol. Chem. 281, 25791-25802 (Pubitemid 44401967)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.35
, pp. 25791-25802
-
-
Wang, Y.1
Bogenhagen, D.F.2
-
142
-
-
1942438570
-
Purified Human SUV3p Exhibits Multiple-Substrate Unwinding Activity upon Conformational Change
-
DOI 10.1021/bi0356449
-
Shu, Z., Vijayakumar, S., Chen, C. F., Chen, P. L. and Lee, W. H. (2004) Purified human SUV3p exhibits multiple-substrate unwinding activity upon conformational change. Biochemistry 43, 4781-4790 (Pubitemid 38509099)
-
(2004)
Biochemistry
, vol.43
, Issue.16
, pp. 4781-4790
-
-
Shu, Z.1
Vijayakumar, S.2
Chen, C.-F.3
Chen, P.-L.4
Lee, W.-H.5
-
143
-
-
55249119103
-
Role of SUV3 helicase in maintaining mitochondrial homeostasis in human cells
-
Khidr, L., Wu, G., Davila, A., Procaccio, V., Wallace, D. and Lee, W. H. (2008) Role of SUV3 helicase in maintaining mitochondrial homeostasis in human cells. J. Biol. Chem. 283, 27064-27073
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 27064-27073
-
-
Khidr, L.1
Wu, G.2
Davila, A.3
Procaccio, V.4
Wallace, D.5
Lee, W.H.6
-
144
-
-
75649152422
-
Human mitochondrial RNA turnover caught in flagranti: Involvement of hSuv3p helicase in RNA surveillance
-
Szczesny, R. J., Borowski, L. S., Brzezniak, L. K., Dmochowska, A., Gewartowski, K., Bartnik, E. and Stepien, P. P. (2010) Human mitochondrial RNA turnover caught in flagranti: involvement of hSuv3p helicase in RNA surveillance. Nucleic Acids Res. 38, 279-298
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 279-298
-
-
Szczesny, R.J.1
Borowski, L.S.2
Brzezniak, L.K.3
Dmochowska, A.4
Gewartowski, K.5
Bartnik, E.6
Stepien, P.P.7
-
145
-
-
80055074798
-
Uncoupling the roles of the SUV3 helicase in maintenance of mitochondrial genome stability and RNA degradation
-
Guo, X. E., Chen, C. F., Wang, D. D., Modrek, A. S., Phan, V. H., Lee, W. H. and Chen, P. L. (2011) Uncoupling the roles of the SUV3 helicase in maintenance of mitochondrial genome stability and RNA degradation. J. Biol. Chem. 286, 38783-38794
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 38783-38794
-
-
Guo, X.E.1
Chen, C.F.2
Wang, D.D.3
Modrek, A.S.4
Phan, V.H.5
Lee, W.H.6
Chen, P.L.7
-
146
-
-
37349107091
-
Interaction of human SUV3 RNA/DNA helicase with BLM helicase; loss of the SUV3 gene results in mouse embryonic lethality
-
DOI 10.1016/j.mad.2007.09.001, PII S0047637407001376
-
Pereira, M., Mason, P., Szczesny, R. J., Maddukuri, L., Dziwura, S., Jedrzejczak, R., Paul, E., Wojcik, A., Dybczynska, L., Tudek, B. et al. (2007)
-
(2007)
Mechanisms of Ageing and Development
, vol.128
, Issue.11-12
, pp. 609-617
-
-
Pereira, M.1
Mason, P.2
Szczesny, R.J.3
Maddukuri, L.4
Dziwura, S.5
Jedrzejczak, R.6
Paul, E.7
Wojcik, A.8
Dybczynska, L.9
Tudek, B.10
Bartnik, E.11
Klysik, J.12
Bohr, V.A.13
Stepien, P.P.14
-
147
-
-
59649125006
-
Disruption of Supv3L1 damages the skin and causes sarcopenia, loss of fat, and death
-
Paul, E., Cronan, R., Weston, P. J., Boekelheide, K., Sedivy, J. M., Lee, S. Y., Wiest, D. L., Resnick, M. B. and Klysik, J. E. (2009) Disruption of Supv3L1 damages the skin and causes sarcopenia, loss of fat, and death. Mamm. Genome 20, 92-108
-
(2009)
Mamm. Genome
, vol.20
, pp. 92-108
-
-
Paul, E.1
Cronan, R.2
Weston, P.J.3
Boekelheide, K.4
Sedivy, J.M.5
Lee, S.Y.6
Wiest, D.L.7
Resnick, M.B.8
Klysik, J.E.9
-
148
-
-
2642580016
-
Premature ageing in mice expressing defective mitochondrial DNA polymerase
-
DOI 10.1038/nature02517
-
Trifunovic, A., Wredenberg, A., Falkenberg, M., Spelbrink, J. N., Rovio, A. T., Bruder, C. E., Bohlooly, Y. M., Gidlof, S., Oldfors, A., Wibom, R. et al. (2004) Premature ageing in mice expressing defective mitochondrial DNA polymerase. Nature 429, 417-423 (Pubitemid 38715133)
-
(2004)
Nature
, vol.429
, Issue.6990
, pp. 417-423
-
-
Trifunovic, A.1
Wredenberg, A.2
Falkenberg, M.3
Spelbrink, J.N.4
Rovio, A.T.5
Bruder, C.E.6
Bohlooly-Y, M.7
Gldlof, S.8
Oldfors, A.9
Wibom, R.10
Tornell, J.11
Jacobs, H.T.12
Larsson, N.-G.13
-
149
-
-
22344456832
-
Mitochondrial DNA mutations, oxidative stress, and apoptosis in mammalian aging
-
Kujoth, G. C., Hiona, A., Pugh, T. D., Someya, S., Panzer, K., Wohlgemuth, S. E., Hofer, T., Seo, A. Y., Sullivan, R., Jobling, W. A. et al. (2005) Mitochondrial DNA mutations, oxidative stress, and apoptosis in mammalian aging. Science 309, 481-484
-
(2005)
Science
, vol.309
, pp. 481-484
-
-
Kujoth, G.C.1
Hiona, A.2
Pugh, T.D.3
Someya, S.4
Panzer, K.5
Wohlgemuth, S.E.6
Hofer, T.7
Seo, A.Y.8
Sullivan, R.9
Jobling, W.A.10
-
150
-
-
34249804768
-
Down-regulation of human RNA/DNA helicase SUV3 induces apoptosis by a caspase- and AIF-dependent pathway
-
Szczesny, R. J., Obriot, H., Paczkowska, A., Jedrzejczak, R., Dmochowska, A., Bartnik, E., Formstecher, P., Polakowska, R. and Stepien, P. P. (2007) Down-regulation of human RNA/DNA helicase SUV3 induces apoptosis by a caspase- and AIF-dependent pathway. Biol. Cell 99, 323-332
-
(2007)
Biol. Cell
, vol.99
, pp. 323-332
-
-
Szczesny, R.J.1
Obriot, H.2
Paczkowska, A.3
Jedrzejczak, R.4
Dmochowska, A.5
Bartnik, E.6
Formstecher, P.7
Polakowska, R.8
Stepien, P.P.9
-
151
-
-
81155154361
-
The human Suv3 helicase interacts with replication protein A and flap endonuclease 1 in the nucleus
-
Veno, S. T., Kulikowicz, T., Pestana, C., Stepien, P. P., Stevnsner, T. and Bohr, V. A. (2011) The human Suv3 helicase interacts with replication protein A and flap endonuclease 1 in the nucleus. Biochem. J. 440, 293-300
-
(2011)
Biochem. J.
, vol.440
, pp. 293-300
-
-
Veno, S.T.1
Kulikowicz, T.2
Pestana, C.3
Stepien, P.P.4
Stevnsner, T.5
Bohr, V.A.6
-
152
-
-
26244453890
-
Human ATP-dependent RNA/DNA helicase hSuv3p interacts with the cofactor of survivin HBXIP
-
DOI 10.1111/j.1742-4658.2005.04910.x
-
Minczuk, M., Mroczek, S., Pawlak, S. D. and Stepien, P. P. (2005) Human ATP-dependent RNA/DNA helicase hSuv3p interacts with the cofactor of survivin HBXIP. FEBS J. 272, 5008-5019 (Pubitemid 41415123)
-
(2005)
FEBS Journal
, vol.272
, Issue.19
, pp. 5008-5019
-
-
Minczuk, M.1
Mroczek, S.2
Pawlak, S.D.3
Stepien, P.P.4
-
153
-
-
33745951483
-
Characterization of the Functional Domains of Escherichia coli RNase II
-
DOI 10.1016/j.jmb.2006.05.043, PII S0022283606006437
-
Amblar, M., Barbas, A., Fialho, A. M. and Arraiano, C. M. (2006) Characterization of the functional domains of Escherichia coli RNase II. J. Mol. Biol. 360, 921-933 (Pubitemid 44062510)
-
(2006)
Journal of Molecular Biology
, vol.360
, Issue.5
, pp. 921-933
-
-
Amblar, M.1
Barbas, A.2
Fialho, A.M.3
Arraiano, C.M.4
-
154
-
-
67650269376
-
Evidence for a degradosome-like complex in the mitochondria of Trypanosoma brucei
-
Mattiacio, J. L. and Read, L. K. (2009) Evidence for a degradosome-like complex in the mitochondria of Trypanosoma brucei. FEBS Lett. 583, 2333-2338
-
(2009)
FEBS Lett.
, vol.583
, pp. 2333-2338
-
-
Mattiacio, J.L.1
Read, L.K.2
-
155
-
-
40849083259
-
The 3′ ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria
-
Hoffmann, B., Nickel, J., Speer, F. and Schafer, B. (2008) The 3′ ends of mature transcripts are generated by a processosome complex in fission yeast mitochondria. J. Mol. Biol. 377, 1024-1037
-
(2008)
J. Mol. Biol.
, vol.377
, pp. 1024-1037
-
-
Hoffmann, B.1
Nickel, J.2
Speer, F.3
Schafer, B.4
-
156
-
-
69449096380
-
Polyadenylation-assisted RNA degradation processes in plants
-
Lange, H., Sement, F. M., Canaday, J. and Gagliardi, D. (2009) Polyadenylation-assisted RNA degradation processes in plants. Trends Plant Sci. 14, 497-504
-
(2009)
Trends Plant Sci.
, vol.14
, pp. 497-504
-
-
Lange, H.1
Sement, F.M.2
Canaday, J.3
Gagliardi, D.4
-
157
-
-
35548995356
-
The RNA degradosome of Escherichia coli: An mRNA-degrading machine assembled on RNase E
-
Carpousis, A. J. (2007) The RNA degradosome of Escherichia coli: an mRNA-degrading machine assembled on RNase E. Annu. Rev. Microbiol. 61, 71-87
-
(2007)
Annu. Rev. Microbiol.
, vol.61
, pp. 71-87
-
-
Carpousis, A.J.1
-
158
-
-
68949108247
-
Human mitochondrial SUV3 and polynucleotide phosphorylase form a 330-kDa heteropentamer to cooperatively degrade double-stranded RNA with a 3′-to-5′ directionality
-
Wang, D. D., Shu, Z., Lieser, S. A., Chen, P. L. and Lee, W. H. (2009) Human mitochondrial SUV3 and polynucleotide phosphorylase form a 330-kDa heteropentamer to cooperatively degrade double-stranded RNA with a 3′-to-5′ directionality. J. Biol. Chem. 284, 20812-20821
-
(2009)
J. Biol. Chem.
, vol.284
, pp. 20812-20821
-
-
Wang, D.D.1
Shu, Z.2
Lieser, S.A.3
Chen, P.L.4
Lee, W.H.5
-
159
-
-
77953790077
-
RNA turnover in human mitochondria: More questions than answers?
-
Borowski, L. S., Szczesny, R. J., Brzezniak, L. K. and Stepien, P. P. (2010) RNA turnover in human mitochondria: more questions than answers? Biochim. Biophys. Acta 1797, 1066-1070
-
(2010)
Biochim. Biophys. Acta
, vol.1797
, pp. 1066-1070
-
-
Borowski, L.S.1
Szczesny, R.J.2
Brzezniak, L.K.3
Stepien, P.P.4
-
160
-
-
61349175928
-
Native R-loops persist throughout the mouse mitochondrial DNA genome
-
Brown, T. A., Tkachuk, A. N. and Clayton, D. A. (2008) Native R-loops persist throughout the mouse mitochondrial DNA genome. J. Biol. Chem. 283, 36743-36751
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 36743-36751
-
-
Brown, T.A.1
Tkachuk, A.N.2
Clayton, D.A.3
-
161
-
-
0027220698
-
Promiscuous exoribonucleases of Escherichia coli
-
Deutscher, M. P. (1993) Promiscuous exoribonucleases of Escherichia coli. J. Bacteriol. 175, 4577-4583
-
(1993)
J. Bacteriol.
, vol.175
, pp. 4577-4583
-
-
Deutscher, M.P.1
-
162
-
-
0032958751
-
YNT20, a bypass suppressor of yme1 yme2, encodes a putative 3'-5' exonuclease localized in mitochondria of Saccharomyces cerevisiae
-
DOI 10.1007/s002940050418
-
Hanekamp, T. and Thorsness, P. E. (1999) YNT20, a bypass suppressor of yme1 yme2, encodes a putative 3′→5′ exonuclease localized in mitochondria of Saccharomyces cerevisiae. Curr. Genet. 34, 438-448 (Pubitemid 29057381)
-
(1999)
Current Genetics
, vol.34
, Issue.6
, pp. 438-448
-
-
Hanekamp, T.1
Thorsness, P.E.2
-
164
-
-
0028983910
-
Birth of the snoRNPs: The evolution of RNase MRP and the eukaryotic pre-rRNA-processing system
-
Morrissey, J. P. and Tollervey, D. (1995) Birth of the snoRNPs: the evolution of RNase MRP and the eukaryotic pre-rRNA-processing system. Trends Biochem. Sci. 20, 78-82
-
(1995)
Trends Biochem. Sci.
, vol.20
, pp. 78-82
-
-
Morrissey, J.P.1
Tollervey, D.2
-
165
-
-
0034714196
-
The human homolog of Escherichia coli Orn degrades small single-stranded RNA and DNA oligomers
-
Nguyen, L. H., Erzberger, J. P., Root, J. and Wilson, III, D. M. (2000) The human homolog of Escherichia coli Orn degrades small single-stranded RNA and DNA oligomers. J. Biol. Chem. 275, 25900-25906
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 25900-25906
-
-
Nguyen, L.H.1
Erzberger, J.P.2
Root, J.3
Wilson III, D.M.4
-
166
-
-
0024278708
-
Purification and properties of the major nuclease from mitochondria of Saccharomyces cerevisiae
-
Dake, E., Hofmann, T. J., McIntire, S., Hudson, A. and Zassenhaus, H. P. (1988) Purification and properties of the major nuclease from mitochondria of Saccharomyces cerevisiae. J. Biol. Chem. 263, 7691-702
-
(1988)
J. Biol. Chem.
, vol.263
, pp. 7691-7702
-
-
Dake, E.1
Hofmann, T.J.2
McIntire, S.3
Hudson, A.4
Zassenhaus, H.P.5
-
167
-
-
0028012341
-
Analysis of the role of the NUC1 endolexonuclease in yeast mitochondrial DNA recombination
-
Zassenhaus, H. P. and Denniger, G. (1994) Analysis of the role of the NUC1 endo/exonuclease in yeast mitochondrial DNA recombination. Curr. Genet. 25, 142-149 (Pubitemid 24025646)
-
(1994)
Current Genetics
, vol.25
, Issue.2
, pp. 142-149
-
-
Zassenhaus, H.P.1
Denniger, G.2
-
168
-
-
33846223232
-
Endonuclease G Regulates Budding Yeast Life and Death
-
DOI 10.1016/j.molcel.2006.12.021, PII S1097276506008951
-
Buttner, S., Eisenberg, T., Carmona-Gutierrez, D., Ruli, D., Knauer, H., Ruckenstuhl, C., Sigrist, C., Wissing, S., Kollroser, M., Frohlich, K. U. et al. (2007) Endonuclease G regulates budding yeast life and death. Mol. Cell 25, 233-246 (Pubitemid 46109611)
-
(2007)
Molecular Cell
, vol.25
, Issue.2
, pp. 233-246
-
-
Buttner, S.1
Eisenberg, T.2
Carmona-Gutierrez, D.3
Ruli, D.4
Knauer, H.5
Ruckenstuhl, C.6
Sigrist, C.7
Wissing, S.8
Kollroser, M.9
Frohlich, K.-U.10
Sigrist, S.11
Madeo, F.12
-
169
-
-
40249097634
-
EXOG, a novel paralog of Endonuclease G in higher eukaryotes
-
DOI 10.1093/nar/gkm1169
-
Cymerman, I. A., Chung, I., Beckmann, B. M., Bujnicki, J. M. and Meiss, G. (2008) EXOG, a novel paralog of endonuclease G in higher eukaryotes. Nucleic Acids Res. 36, 1369-1379 (Pubitemid 351330951)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.4
, pp. 1369-1379
-
-
Cymerman, I.A.1
Chung, I.2
Beckmann, B.M.3
Bujnicki, J.M.4
Meiss, G.5
-
170
-
-
0035811496
-
Endonuclease G is an apoptotic DNase when released from mitochondria
-
DOI 10.1038/35083620
-
Li, L. Y., Luo, X. and Wang, X. (2001) Endonuclease G is an apoptotic DNase when released from mitochondria. Nature 412, 95-99 (Pubitemid 32851517)
-
(2001)
Nature
, vol.412
, Issue.6842
, pp. 95-99
-
-
Li, L.Y.1
Luo, X.2
Wang, X.3
-
171
-
-
80052698492
-
Apoptosis induced by persistent single-strand breaks in mitochondrial genome: Critical role of EXOG (5′-EXO/endonuclease) in their repair
-
Tann, A. W., Boldogh, I., Meiss, G., Qian, W., Van Houten, B., Mitra, S. and Szczesny, B. (2011) Apoptosis induced by persistent single-strand breaks in mitochondrial genome: critical role of EXOG (5′-EXO/endonuclease) in their repair. J. Biol. Chem. 286, 31975-31983
-
(2011)
J. Biol. Chem.
, vol.286
, pp. 31975-31983
-
-
Tann, A.W.1
Boldogh, I.2
Meiss, G.3
Qian, W.4
Van Houten, B.5
Mitra, S.6
Szczesny, B.7
-
172
-
-
33749150990
-
RNase L: Its biological roles and regulation
-
DOI 10.1080/15216540600838232, PII QW28XRNUX638M8T1
-
Liang, S. L., Quirk, D. and Zhou, A. (2006) RNase L: its biological roles and regulation. IUBMB Life 58, 508-514 (Pubitemid 44470236)
-
(2006)
IUBMB Life
, vol.58
, Issue.9
, pp. 508-514
-
-
Liang, S.-L.1
Quirk, D.2
Zhou, A.3
-
173
-
-
0035930588
-
The 2-5A/RNase L/RNase L inhibitor (RLI) [correction of (RNI)] pathway regulates mitochondrial mRNAs stability in interferon α-treated H9 cells
-
Le Roy, F., Bisbal, C., Silhol, M., Martinand, C., Lebleu, B. and Salehzada, T. (2001) The 2-5A/RNase L/RNase L inhibitor (RLI) [correction of (RNI)] pathway regulates mitochondrial mRNAs stability in interferon α-treated H9 cells. J. Biol. Chem. 276, 48473-48482
-
(2001)
J. Biol. Chem.
, vol.276
, pp. 48473-48482
-
-
Le Roy, F.1
Bisbal, C.2
Silhol, M.3
Martinand, C.4
Lebleu, B.5
Salehzada, T.6
-
174
-
-
7444230420
-
RNase-L regulates the stability of mitochondrial DNA-encoded mRNAs in mouse embryo fibroblasts
-
DOI 10.1016/j.bbrc.2004.10.016, PII S0006291X04023101
-
Chandrasekaran, K., Mehrabian, Z., Li, X. L. and Hassel, B. (2004) RNase-L regulates the stability of mitochondrial DNA-encoded mRNAs in mouse embryo fibroblasts. Biochem. Biophys. Res. Commun. 325, 18-23 (Pubitemid 39441155)
-
(2004)
Biochemical and Biophysical Research Communications
, vol.325
, Issue.1
, pp. 18-23
-
-
Chandrasekaran, K.1
Mehrabian, Z.2
Li, X.-L.3
Hassel, B.4
-
175
-
-
34447636435
-
Regulation of mitochondrial mRNA stability by RNase L is translation-dependent and controls IFNα-induced apoptosis
-
DOI 10.1038/sj.cdd.4402130, PII 4402130
-
Le Roy, F., Silhol, M., Salehzada, T. and Bisbal, C. (2007) Regulation of mitochondrial mRNA stability by RNase L is translation-dependent and controls IFNα-induced apoptosis. Cell Death Differ. 14, 1406-1413 (Pubitemid 47086729)
-
(2007)
Cell Death and Differentiation
, vol.14
, Issue.8
, pp. 1406-1413
-
-
Le, R.F.1
Silhol, M.2
Salehzada, T.3
Bisbal, C.4
-
176
-
-
77954877566
-
The human core exosome interacts with differentially localized processive RNases: HDIS3 and hDIS3L
-
Tomecki, R., Kristiansen, M. S., Lykke-Andersen, S., Chlebowski, A., Larsen, K. M., Szczesny, R. J., Drazkowska, K., Pastula, A., Andersen, J. S., Stepien, P. P. et al. (2010) The human core exosome interacts with differentially localized processive RNases: hDIS3 and hDIS3L. EMBO J. 29, 2342-2357
-
(2010)
EMBO J.
, vol.29
, pp. 2342-2357
-
-
Tomecki, R.1
Kristiansen, M.S.2
Lykke-Andersen, S.3
Chlebowski, A.4
Larsen, K.M.5
Szczesny, R.J.6
Drazkowska, K.7
Pastula, A.8
Andersen, J.S.9
Stepien, P.P.10
-
177
-
-
77954867631
-
Dis3-like 1: A novel exoribonuclease associated with the human exosome
-
Staals, R. H., Bronkhorst, A. W., Schilders, G., Slomovic, S., Schuster, G., Heck, A. J., Raijmakers, R. and Pruijn, G. J. (2010) Dis3-like 1: a novel exoribonuclease associated with the human exosome. EMBO J. 29, 2358-2367
-
(2010)
EMBO J.
, vol.29
, pp. 2358-2367
-
-
Staals, R.H.1
Bronkhorst, A.W.2
Schilders, G.3
Slomovic, S.4
Schuster, G.5
Heck, A.J.6
Raijmakers, R.7
Pruijn, G.J.8
-
178
-
-
1342346710
-
A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans
-
DOI 10.1038/nature02302
-
Kennedy, S., Wang, D. and Ruvkun, G. (2004) A conserved siRNA-degrading RNase negatively regulates RNA interference in C. elegans. Nature 427, 645-649 (Pubitemid 38248485)
-
(2004)
Nature
, vol.427
, Issue.6975
, pp. 645-649
-
-
Kennedy, S.1
Wang, D.2
Ruvkun, G.3
-
179
-
-
43249092177
-
The exonuclease ERI-1 has a conserved dual role in 5.8S rRNA processing and RNAi
-
DOI 10.1038/nsmb.1411, PII NSMB1411
-
Gabel, H. W. and Ruvkun, G. (2008) The exonuclease ERI-1 has a conserved dual role in 5.8S rRNA processing and RNAi. Nat. Struct. Mol. Biol. 15, 531-533 (Pubitemid 351653584)
-
(2008)
Nature Structural and Molecular Biology
, vol.15
, Issue.5
, pp. 531-533
-
-
Gabel, H.W.1
Ruvkun, G.2
-
180
-
-
33750044572
-
Characterization of 3′hExo, a 3′ exonuclease specifically interacting with the 3′ end of histone mRNA
-
DOI 10.1074/jbc.M602947200
-
Yang, X. C., Purdy, M., Marzluff, W. F. and Dominski, Z. (2006) Characterization of 3′hExo, a 3′ exonuclease specifically interacting with the 3′ end of histone mRNA. J. Biol. Chem. 281, 30447-30454 (Pubitemid 44582100)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.41
, pp. 30447-30454
-
-
Yang, X.-C.1
Purdy, M.2
Marzluff, W.F.3
Dominski, Z.4
-
181
-
-
0034743345
-
A member of the YER057 c/yjgf/Uk114 family links isoleucine biosynthesis and intact mitochondria maintenance in Saccharomyces cerevisiae
-
DOI 10.1046/j.1365-2443.2001.00443.x
-
Kim, J. M., Yoshikawa, H. and Shirahige, K. (2001) A member of the YER057c/yjgf/Uk114 family links isoleucine biosynthesis and intact mitochondria maintenance in Saccharomyces cerevisiae. Genes Cells 6, 507-517 (Pubitemid 32655383)
-
(2001)
Genes to Cells
, vol.6
, Issue.6
, pp. 507-517
-
-
Kim, J.-M.1
Yoshikawa, H.2
Shirahige, K.3
-
182
-
-
78049389236
-
Members of the YjgF/YER057c/UK114 family of proteins inhibit phosphoribosylamine synthesis in vitro
-
Lambrecht, J. A., Browne, B. A. and Downs, D. M. (2010) Members of the YjgF/YER057c/UK114 family of proteins inhibit phosphoribosylamine synthesis in vitro. J. Biol. Chem. 285, 34401-34407
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 34401-34407
-
-
Lambrecht, J.A.1
Browne, B.A.2
Downs, D.M.3
-
183
-
-
0029585753
-
Isolation and characterization of a novel perchloric acid-soluble protein inhibiting cell-free protein synthesis
-
DOI 10.1074/jbc.270.50.30060
-
Oka, T., Tsuji, H., Noda, C., Sakai, K., Hong, Y. M., Suzuki, I., Munoz, S. and Natori, Y. (1995) Isolation and characterization of a novel perchloric acid-soluble protein inhibiting cell-free protein synthesis. J. Biol. Chem. 270, 30060-30067 (Pubitemid 26001680)
-
(1995)
Journal of Biological Chemistry
, vol.270
, Issue.50
, pp. 30060-30067
-
-
Oka, T.1
Tsuji, H.2
Noda, C.3
Sakai, K.4
Hong, Y.-M.5
Suzuki, I.6
Munoz, S.7
Natori, Y.8
-
184
-
-
0033575262
-
Ribonuclease activity of rat liver perchloric acid-soluble protein, a potent inhibitor of protein synthesis
-
Morishita, R., Kawagoshi, A., Sawasaki, T., Madin, K., Ogasawara, T., Oka, T. and Endo, Y. (1999) Ribonuclease activity of rat liver perchloric acid-soluble protein, a potent inhibitor of protein synthesis. J. Biol. Chem. 274, 20688-20692
-
(1999)
J. Biol. Chem.
, vol.274
, pp. 20688-20692
-
-
Morishita, R.1
Kawagoshi, A.2
Sawasaki, T.3
Madin, K.4
Ogasawara, T.5
Oka, T.6
Endo, Y.7
-
185
-
-
46349103594
-
A Mitochondrial Protein Compendium Elucidates Complex I Disease Biology
-
DOI 10.1016/j.cell.2008.06.016, PII S009286740800768X
-
Pagliarini, D. J., Calvo, S. E., Chang, B., Sheth, S. A., Vafai, S. B., Ong, S. E., Walford, G. A., Sugiana, C., Boneh, A., Chen, W. K. et al. (2008) A mitochondrial protein compendium elucidates complex I disease biology. Cell 134, 112-123 (Pubitemid 351916708)
-
(2008)
Cell
, vol.134
, Issue.1
, pp. 112-123
-
-
Pagliarini, D.J.1
Calvo, S.E.2
Chang, B.3
Sheth, S.A.4
Vafai, S.B.5
Ong, S.-E.6
Walford, G.A.7
Sugiana, C.8
Boneh, A.9
Chen, W.K.10
Hill, D.E.11
Vidal, M.12
Evans, J.G.13
Thorburn, D.R.14
Carr, S.A.15
Mootha, V.K.16
-
186
-
-
0033805464
-
Mmf1p, a novel yeast mitochondrial protein conserved throughout evolution and involved in maintenance of the mitochondrial genome
-
Oxelmark, E., Marchini, A., Malanchi, I., Magherini, F., Jaquet, L., Hajibagheri, M. A., Blight, K. J., Jauniaux, J. C. and Tommasino, M. (2000) Mmf1p, a novel yeast mitochondrial protein conserved throughout evolution and involved in maintenance of the mitochondrial genome. Mol. Cell. Biol. 20, 7784-7797
-
(2000)
Mol. Cell. Biol.
, vol.20
, pp. 7784-7797
-
-
Oxelmark, E.1
Marchini, A.2
Malanchi, I.3
Magherini, F.4
Jaquet, L.5
Hajibagheri, M.A.6
Blight, K.J.7
Jauniaux, J.C.8
Tommasino, M.9
-
187
-
-
2542526151
-
High levels of the mitochondrial large ribosomal subunit protein 40 prevent loss of mitochondrial DNA in null mmfl Saccharomyces cerevisiae cells
-
DOI 10.1002/yea.1121
-
Accardi, R., Oxelmark, E., Jauniaux, N., de Pinto, V., Marchini, A. and Tommasino, M. (2004) High levels of the mitochondrial large ribosomal subunit protein 40 prevent loss of mitochondrial DNA in null mmf1 Saccharomyces cerevisiae cells. Yeast 21, 539-548 (Pubitemid 38702111)
-
(2004)
Yeast
, vol.21
, Issue.7
, pp. 539-548
-
-
Accardi, R.1
Oxelmark, E.2
Jauniaux, N.3
De Pinto, V.4
Marchini, A.5
Tommasino, M.6
-
188
-
-
33645704767
-
Quantitative proteomic comparison of rat mitochondria from muscle, heart, and liver
-
Forner, F., Foster, L. J., Campanaro, S., Valle, G. and Mann, M. (2006) Quantitative proteomic comparison of rat mitochondria from muscle, heart, and liver. Mol. Cell. Proteomics 5, 608-619
-
(2006)
Mol. Cell. Proteomics
, vol.5
, pp. 608-619
-
-
Forner, F.1
Foster, L.J.2
Campanaro, S.3
Valle, G.4
Mann, M.5
-
189
-
-
0037336905
-
Characterization of the human heart mitochondrial proteome
-
DOI 10.1038/nbt793
-
Taylor, S. W., Fahy, E., Zhang, B., Glenn, G. M., Warnock, D. E., Wiley, S., Murphy, A. N., Gaucher, S. P., Capaldi, R. A., Gibson, B. W. and Ghosh, S. S. (2003) Characterization of the human heart mitochondrial proteome. Nat. Biotechnol. 21, 281-286 (Pubitemid 36314812)
-
(2003)
Nature Biotechnology
, vol.21
, Issue.3
, pp. 281-286
-
-
Taylor, S.W.1
Fahy, E.2
Zhang, B.3
Glenn, G.M.4
Warnock, D.E.5
Wiley, S.6
Murphy, A.N.7
Gaucher, S.P.8
Capaldi, R.A.9
Gibson, B.W.10
Ghosh, S.S.11
-
190
-
-
33646362551
-
Systematic identification of human mitochondrial disease genes through integrative genomics
-
Calvo, S., Jain, M., Xie, X., Sheth, S. A., Chang, B., Goldberger, O. A., Spinazzola, A., Zeviani, M., Carr, S. A. and Mootha, V. K. (2006) Systematic identification of human mitochondrial disease genes through integrative genomics. Nat. Genet. 38, 576-582
-
(2006)
Nat. Genet.
, vol.38
, pp. 576-582
-
-
Calvo, S.1
Jain, M.2
Xie, X.3
Sheth, S.A.4
Chang, B.5
Goldberger, O.A.6
Spinazzola, A.7
Zeviani, M.8
Carr, S.A.9
Mootha, V.K.10
-
191
-
-
81755161589
-
Long noncoding RNAs are generated from the mitochondrial genome and regulated by nuclear-encoded proteins
-
Rackham, O., Shearwood, A. M., Mercer, T. R., Davies, S. M., Mattick, J. S. and Filipovska, A. (2011) Long noncoding RNAs are generated from the mitochondrial genome and regulated by nuclear-encoded proteins. RNA 17, 2085-2093
-
(2011)
RNA
, vol.17
, pp. 2085-2093
-
-
Rackham, O.1
Shearwood, A.M.2
Mercer, T.R.3
Davies, S.M.4
Mattick, J.S.5
Filipovska, A.6
|