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Volumn 25, Issue 5, 2005, Pages 1634-1644

Opposing effects of polyadenylation on the stability of edited and unedited mitochondrial RNAs in Trypanosoma brucei

Author keywords

[No Author keywords available]

Indexed keywords

EXODEOXYRIBONUCLEASE III; EXODEOXYRIBONUCLEASE V; MITOCHONDRIAL RNA; NUCLEOTIDE; POLYADENYLIC ACID; RNA;

EID: 14044264228     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.25.5.1634-1644.2005     Document Type: Article
Times cited : (65)

References (43)
  • 1
    • 0024591905 scopus 로고
    • The poly(A)-poly(A)-binding protein complex is a major determinant of mRNA stability in vitro
    • Bernstein, P., S. W. Peltz, and J. Ross. 1989. The poly(A)-poly(A)- binding protein complex is a major determinant of mRNA stability in vitro. Mol. Cell. Biol. 9:659-670.
    • (1989) Mol. Cell. Biol. , vol.9 , pp. 659-670
    • Bernstein, P.1    Peltz, S.W.2    Ross, J.3
  • 2
    • 0026530254 scopus 로고
    • Transcript-specific developmental regulation of polyadenylation in Trypanosoma brucei mitochondria
    • Bhat, G. J., A. E. Souza, J. E. Feagin, and K. Stuart. 1992. Transcript-specific developmental regulation of polyadenylation in Trypanosoma brucei mitochondria. Mol. Biochem. Parasitol. 52:231-240.
    • (1992) Mol. Biochem. Parasitol. , vol.52 , pp. 231-240
    • Bhat, G.J.1    Souza, A.E.2    Feagin, J.E.3    Stuart, K.4
  • 3
    • 0026252998 scopus 로고
    • Trypanosoma (Nannomonas) congolense: Changes in respiratory metabolism during the life cycle
    • Bienen, E. J., P. Webster, and W. R. Fish. 1991. Trypanosoma (Nannomonas) congolense: changes in respiratory metabolism during the life cycle. Exp. Parasitol. 73:403-412.
    • (1991) Exp. Parasitol. , vol.73 , pp. 403-412
    • Bienen, E.J.1    Webster, P.2    Fish, W.R.3
  • 4
    • 0033548140 scopus 로고    scopus 로고
    • Polyadenylation promotes degradation of 3′-structured RNA by the Escherichia coli mRNA degradosome in vitro
    • Blum, E., A. J. Carpousis, and C. F. Higgins. 1999. Polyadenylation promotes degradation of 3′-structured RNA by the Escherichia coli mRNA degradosome in vitro. J. Biol. Chem. 274:4009-4016.
    • (1999) J. Biol. Chem. , vol.274 , pp. 4009-4016
    • Blum, E.1    Carpousis, A.J.2    Higgins, C.F.3
  • 6
    • 0018601361 scopus 로고
    • Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium
    • Brun, R., and M. Schonenberger. 1979. Cultivation and in vitro cloning or procyclic culture forms of Trypanosoma brucei in a semi-defined medium. Acta Trop. 36:289-292.
    • (1979) Acta Trop. , vol.36 , pp. 289-292
    • Brun, R.1    Schonenberger, M.2
  • 7
    • 0024892285 scopus 로고
    • The role of a conserved dodecamer sequence in yeast mitochondrial gene expression
    • Butow, R. A., H. Zhu, P. Perlman, and H. Conrad-Webb. 1989. The role of a conserved dodecamer sequence in yeast mitochondrial gene expression. Genome 31:757-760.
    • (1989) Genome , vol.31 , pp. 757-760
    • Butow, R.A.1    Zhu, H.2    Perlman, P.3    Conrad-Webb, H.4
  • 8
    • 0032916509 scopus 로고    scopus 로고
    • mRNA degradation. A tale of poly(A) and multiprotein machines
    • Carpousis, A. J., N. F. Vanzo, and L. C. Raynal. 1999. mRNA degradation. A tale of poly(A) and multiprotein machines. Trends Genet. 15:24-28.
    • (1999) Trends Genet. , vol.15 , pp. 24-28
    • Carpousis, A.J.1    Vanzo, N.F.2    Raynal, L.C.3
  • 9
    • 0034693061 scopus 로고    scopus 로고
    • Poly(A) tail-dependent exonuclease AtRrp41p from Arabidopsis thaliana rescues 5.8S rRNA processing and mRNA decay defects of the yeast ski6 mutant and is found in an exosome-sized complex in plant and yeast cells
    • Chekanova, J. A., R. J. Shaw, M. A. Wills, and D. A. Belostotsky. 2000. Poly(A) tail-dependent exonuclease AtRrp41p from Arabidopsis thaliana rescues 5.8S rRNA processing and mRNA decay defects of the yeast ski6 mutant and is found in an exosome-sized complex in plant and yeast cells. J. Biol. Chem. 275:33158-33166.
    • (2000) J. Biol. Chem. , vol.275 , pp. 33158-33166
    • Chekanova, J.A.1    Shaw, R.J.2    Wills, M.A.3    Belostotsky, D.A.4
  • 10
    • 0028310842 scopus 로고
    • Cbp1p is required for message stability following 5′-processing of COB mRNA
    • Chen, W., and C. L. Dieckmann. 1994. Cbp1p is required for message stability following 5′-processing of COB mRNA. J. Biol. Chem. 269:16574-16578.
    • (1994) J. Biol. Chem. , vol.269 , pp. 16574-16578
    • Chen, W.1    Dieckmann, C.L.2
  • 11
    • 0025294781 scopus 로고
    • RNA editing involves indiscriminate U changes throughout precisely defined editing domains
    • Decker, C. J., and B. Sollner-Webb. 1990. RNA editing involves indiscriminate U changes throughout precisely defined editing domains. Cell 61:1001-1011.
    • (1990) Cell , vol.61 , pp. 1001-1011
    • Decker, C.J.1    Sollner-Webb, B.2
  • 13
    • 0035898660 scopus 로고    scopus 로고
    • The exosome of Trypanosoma brucei
    • Esterez, A. M., T. Kempf, and C. Clayton. 2001. The exosome of Trypanosoma brucei. EMBO J. 20:3831-3839.
    • (2001) EMBO J. , vol.20 , pp. 3831-3839
    • Esterez, A.M.1    Kempf, T.2    Clayton, C.3
  • 14
    • 0022432245 scopus 로고
    • Apocytochrome b and other mitochondrial DNA sequences are differentially expressed during the life cycle of Trypanosoma brucei
    • Feagin, J. E., D. P. Jasmer, and K. Stuart. 1985. Apocytochrome b and other mitochondrial DNA sequences are differentially expressed during the life cycle of Trypanosoma brucei. Nucleic Acids Res. 13:4577-4596.
    • (1985) Nucleic Acids Res. , vol.13 , pp. 4577-4596
    • Feagin, J.E.1    Jasmer, D.P.2    Stuart, K.3
  • 15
    • 0031026161 scopus 로고    scopus 로고
    • The poly(A) tail inhibits the assembly of a 3′-to-5′ exonuclease in an in vitro RNA stability system
    • Ford, L. P., P. S. Bagga, and J. Wilusz. 1997. The poly(A) tail inhibits the assembly of a 3′-to-5′ exonuclease in an in vitro RNA stability system. Mol. Cell. Biol. 17:398-406.
    • (1997) Mol. Cell. Biol. , vol.17 , pp. 398-406
    • Ford, L.P.1    Bagga, P.S.2    Wilusz, J.3
  • 16
    • 0033168679 scopus 로고    scopus 로고
    • Polyadenylation accelerates the degradation of the mitochondrial mRNA associated with cytoplasmic male sterility in sunflower
    • Gagliardi, D., and C. J. Leaver. 1999. Polyadenylation accelerates the degradation of the mitochondrial mRNA associated with cytoplasmic male sterility in sunflower. EMBO J. 18:3757-3766.
    • (1999) EMBO J. , vol.18 , pp. 3757-3766
    • Gagliardi, D.1    Leaver, C.J.2
  • 17
    • 0035941259 scopus 로고    scopus 로고
    • Plant mitochondrial polyadenylated mRNAs are degraded by a 3′-to-5′ exoribonuclease activity, which proceeds unimpeded by stable secondary structures
    • Gagliardi, D., R. Perrin, L. Marechal-Drouard, J. M. Grienenberger, and C. J. Leaver. 2001. Plant mitochondrial polyadenylated mRNAs are degraded by a 3′-to-5′ exoribonuclease activity, which proceeds unimpeded by stable secondary structures. J. Biol. Chem. 276:43541-43547.
    • (2001) J. Biol. Chem. , vol.276 , pp. 43541-43547
    • Gagliardi, D.1    Perrin, R.2    Marechal-Drouard, L.3    Grienenberger, J.M.4    Leaver, C.J.5
  • 19
    • 0034675929 scopus 로고    scopus 로고
    • Processing of polycistronic guide RNAs is associated with RNA editing complexes in Trypanosoma brucei
    • Grams, J., M. T. McManus, and S. L. Hajduk. 2000. Processing of polycistronic guide RNAs is associated with RNA editing complexes in Trypanosoma brucei. EMBO J. 19:5525-5532.
    • (2000) EMBO J. , vol.19 , pp. 5525-5532
    • Grams, J.1    McManus, M.T.2    Hajduk, S.L.3
  • 20
    • 0025351935 scopus 로고
    • Addition of uridines to edited RNAs in trypanosome mitochondria occurs independently of transcription
    • Harris, M. E., D. R. Moore, and S. L. Hajduk. 1990. Addition of uridines to edited RNAs in trypanosome mitochondria occurs independently of transcription. J. Biol. Chem. 265:11368-11376.
    • (1990) J. Biol. Chem. , vol.265 , pp. 11368-11376
    • Harris, M.E.1    Moore, D.R.2    Hajduk, S.L.3
  • 21
    • 0025946104 scopus 로고
    • Cycles of progressive realignment of gRNA with mRNA in RNA editing
    • Koslowsky, D. J., G. J. Bhat, L. K. Read, and K. Stuart. 1991. Cycles of progressive realignment of gRNA with mRNA in RNA editing. Cell 67:537-546.
    • (1991) Cell , vol.67 , pp. 537-546
    • Koslowsky, D.J.1    Bhat, G.J.2    Read, L.K.3    Stuart, K.4
  • 22
    • 0031438786 scopus 로고    scopus 로고
    • Mitochondrial mRNA 3′ cleavage/polyadenylation and RNA editing in Trypanosoma brucei are independent events
    • Koslowsky, D. J., and G. Yahampath. 1997. Mitochondrial mRNA 3′ cleavage/polyadenylation and RNA editing in Trypanosoma brucei are independent events. Mol. Biochem. Parasitol. 90:81-94.
    • (1997) Mol. Biochem. Parasitol. , vol.90 , pp. 81-94
    • Koslowsky, D.J.1    Yahampath, G.2
  • 23
    • 0035138023 scopus 로고    scopus 로고
    • Transcript lifetime is balanced between stabilizing stem-loop structures and degradation-promoting polyadenylation in plant mitochondria
    • Kuhn, J., U. Tengler, and S. Binder. 2001. Transcript lifetime is balanced between stabilizing stem-loop structures and degradation-promoting polyadenylation in plant mitochondria. Mol. Cell. Biol. 21:731-742.
    • (2001) Mol. Cell. Biol. , vol.21 , pp. 731-742
    • Kuhn, J.1    Tengler, U.2    Binder, S.3
  • 24
    • 0029828944 scopus 로고    scopus 로고
    • Addition of destabilizing poly(A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA
    • Lisitsky, L. P. Klaff, and G. Schuster. 1996. Addition of destabilizing poly(A)-rich sequences to endonuclease cleavage sites during the degradation of chloroplast mRNA. Proc. Natl. Acad. Sci. USA 93:13398-13403.
    • (1996) Proc. Natl. Acad. Sci. USA , vol.93 , pp. 13398-13403
    • Lisitsky1    Klaff, L.P.2    Schuster, G.3
  • 25
    • 0030748658 scopus 로고    scopus 로고
    • The mechanism of preferential degradation of polyadenylated RNA in the chloroplast. The exoribonuclease 100RNP/polynucleotide phosphorylase displays high binding affinity for poly(A) sequence
    • Lisitsky, I., A. Kotler, and G. Schuster. 1997. The mechanism of preferential degradation of polyadenylated RNA in the chloroplast. The exoribonuclease 100RNP/polynucleotide phosphorylase displays high binding affinity for poly(A) sequence. J. Biol. Chem. 272:17648-17653.
    • (1997) J. Biol. Chem. , vol.272 , pp. 17648-17653
    • Lisitsky, I.1    Kotler, A.2    Schuster, G.3
  • 26
    • 0033560992 scopus 로고    scopus 로고
    • Preferential degradation of polyadenylated and polyuridinylated RNAs by the bacterial exoribonuclease polynucleotide phosphorylase
    • Lisitsky, I., and G. Schuster. 1999. Preferential degradation of polyadenylated and polyuridinylated RNAs by the bacterial exoribonuclease polynucleotide phosphorylase. Eur. J. Biochem. 261:468-474.
    • (1999) Eur. J. Biochem. , vol.261 , pp. 468-474
    • Lisitsky, I.1    Schuster, G.2
  • 27
    • 0037154955 scopus 로고    scopus 로고
    • Editing machines: The complexities of trypanosome RNA editing
    • Madison-Antenucci, S., J. Grams, and S. L. Hajduk. 2002. Editing machines: the complexities of trypanosome RNA editing. Cell 108:435-438.
    • (2002) Cell , vol.108 , pp. 435-438
    • Madison-Antenucci, S.1    Grams, J.2    Hajduk, S.L.3
  • 28
    • 0038487811 scopus 로고    scopus 로고
    • Poly(A)-binding proteins: Multifunctional scaffolds for the post-transcriptional control of gene expression
    • Mangus, D. A., M. C. Evans, and A. Jacobson. 2003. Poly(A)-binding proteins: multifunctional scaffolds for the post-transcriptional control of gene expression. Genome Biol. 4:223.
    • (2003) Genome Biol. , vol.4 , pp. 223
    • Mangus, D.A.1    Evans, M.C.2    Jacobson, A.3
  • 29
    • 0023100252 scopus 로고
    • Developmental regulation of trypanosome mitochondrial gene expression
    • Michelotti, E. F., and S. L. Hajduk. 1987. Developmental regulation of trypanosome mitochondrial gene expression. J. Biol. Chem. 262:927-932.
    • (1987) J. Biol. Chem. , vol.262 , pp. 927-932
    • Michelotti, E.F.1    Hajduk, S.L.2
  • 30
    • 0033105945 scopus 로고    scopus 로고
    • Coordination of kRNA editing and polyadenylation in Trypanosoma brucei mitochondria: Complete editing is not required for long poly(A) tract addition
    • Militello, K. T., and L. K. Read. 1999. Coordination of kRNA editing and polyadenylation in Trypanosoma brucei mitochondria: complete editing is not required for long poly(A) tract addition. Nucleic Acids Res. 27:1377-1385.
    • (1999) Nucleic Acids Res. , vol.27 , pp. 1377-1385
    • Militello, K.T.1    Read, L.K.2
  • 31
    • 0034018551 scopus 로고    scopus 로고
    • UTP-dependent and -independent pathways of mRNA turnover in Trypanosoma brucei mitochondria
    • Militello, K. T., and L. K. Read. 2000. UTP-dependent and -independent pathways of mRNA turnover in Trypanosoma brucei mitochondria. Mol. Cell. Biol. 20:2308-2316.
    • (2000) Mol. Cell. Biol. , vol.20 , pp. 2308-2316
    • Militello, K.T.1    Read, L.K.2
  • 32
    • 1242341512 scopus 로고    scopus 로고
    • Characterization of deadenylation in trypanosome extracts and its inhibition by poly(A)-binding protein Pab1p
    • Milone, J., J. Wilusz, and V. Bellofatto. 2004. Characterization of deadenylation in trypanosome extracts and its inhibition by poly(A)-binding protein Pab1p. RNA 10:448-457.
    • (2004) RNA , vol.10 , pp. 448-457
    • Milone, J.1    Wilusz, J.2    Bellofatto, V.3
  • 33
    • 0026543293 scopus 로고
    • Extensive editing of both processed and preprocessed maxicircle CR6 transcripts in Trypanosoma brucei
    • Read, L. K., P. J. Myler, and K. Stuart. 1992. Extensive editing of both processed and preprocessed maxicircle CR6 transcripts in Trypanosoma brucei. J. Biol. Chem. 267:1123-1128.
    • (1992) J. Biol. Chem. , vol.267 , pp. 1123-1128
    • Read, L.K.1    Myler, P.J.2    Stuart, K.3
  • 34
    • 0028567988 scopus 로고
    • Developmental regulation of RNA editing and polyadenylation in four life cycle stages of Trypanosoma congolense
    • Read, L. K., K. A. Stankey, W. R. Fish, A. M. Muthiani, and K. Stuart. 1994. Developmental regulation of RNA editing and polyadenylation in four life cycle stages of Trypanosoma congolense. Mol. Biochem. Parasitol. 68:297-306.
    • (1994) Mol. Biochem. Parasitol. , vol.68 , pp. 297-306
    • Read, L.K.1    Stankey, K.A.2    Fish, W.R.3    Muthiani, A.M.4    Stuart, K.5
  • 35
    • 0042858518 scopus 로고    scopus 로고
    • Polyadenylation regulates the stability of Trypanosoma brucei mitochondrial RNAs
    • Ryan, C. M., K. T. Militello, and L. K. Read. 2003. Polyadenylation regulates the stability of Trypanosoma brucei mitochondrial RNAs. J. Biol. Chem. 278:32753-32762.
    • (2003) J. Biol. Chem. , vol.278 , pp. 32753-32762
    • Ryan, C.M.1    Militello, K.T.2    Read, L.K.3
  • 36
    • 0031009317 scopus 로고    scopus 로고
    • Polyadenylation of mRNA in prokaryotes
    • Sarkar, N. 1997. Polyadenylation of mRNA in prokaryotes. Annu. Rev. Biochem. 66:173-197.
    • (1997) Annu. Rev. Biochem. , vol.66 , pp. 173-197
    • Sarkar, N.1
  • 37
    • 1642580825 scopus 로고    scopus 로고
    • Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing
    • Simpson, L., R. Aphasizhev, G. Gao, and X. Kang. 2004. Mitochondrial proteins and complexes in Leishmania and Trypanosoma involved in U-insertion/deletion RNA editing. RNA 10:159-170.
    • (2004) RNA , vol.10 , pp. 159-170
    • Simpson, L.1    Aphasizhev, R.2    Gao, G.3    Kang, X.4
  • 38
    • 0037371743 scopus 로고    scopus 로고
    • Uridine insertion/deletion RNA editing in trypanosome mitochondria: A complex business
    • Simpson, L., S. Sbicego, and R. Aphasizhev. 2003. Uridine insertion/deletion RNA editing in trypanosome mitochondria: a complex business. RNA 9:265-276.
    • (2003) RNA , vol.9 , pp. 265-276
    • Simpson, L.1    Sbicego, S.2    Aphasizhev, R.3
  • 39
    • 0026780756 scopus 로고
    • Maxicircle CR1 transcripts of Trypanosoma brucei are edited and developmentally regulated and encode a putative iron-sulfur protein homologous to an NADH dehydrogenase subunit
    • Souza, A. E., P. J. Myler, and K. Stuart. 1992. Maxicircle CR1 transcripts of Trypanosoma brucei are edited and developmentally regulated and encode a putative iron-sulfur protein homologous to an NADH dehydrogenase subunit. Mol. Cell. Biol. 12:2100-2107.
    • (1992) Mol. Cell. Biol. , vol.12 , pp. 2100-2107
    • Souza, A.E.1    Myler, P.J.2    Stuart, K.3
  • 40
    • 0036364353 scopus 로고    scopus 로고
    • RNA editing: Complexity and complications
    • Stuart, K., and A. K. Panigrahi. 2002. RNA editing: complexity and complications. Mol. Microbiol. 45:591-596.
    • (2002) Mol. Microbiol. , vol.45 , pp. 591-596
    • Stuart, K.1    Panigrahi, A.K.2
  • 42
    • 0023796283 scopus 로고
    • Posttranscriptional regulation of cytochrome c expression during the developmental cycle of Trypanosoma brucei
    • Torri, A. F., and S. L. Hajduk. 1988. Posttranscriptional regulation of cytochrome c expression during the developmental cycle of Trypanosoma brucei. Mol. Cell. Biol. 8:4625-4633.
    • (1988) Mol. Cell. Biol. , vol.8 , pp. 4625-4633
    • Torri, A.F.1    Hajduk, S.L.2
  • 43
    • 0034761729 scopus 로고    scopus 로고
    • Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts
    • Wilusz, C. J., M. Gao, C. L. Jones, J. Wilusz, and S. W. Peltz. 2001. Poly(A)-binding proteins regulate both mRNA deadenylation and decapping in yeast cytoplasmic extracts. RNA 7:1416-1424.
    • (2001) RNA , vol.7 , pp. 1416-1424
    • Wilusz, C.J.1    Gao, M.2    Jones, C.L.3    Wilusz, J.4    Peltz, S.W.5


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.