-
1
-
-
84864059917
-
Multilocus sequence typing as a replacement for serotyping in Salmonella enterica
-
Achtman M, Wain J, Weill F-X, Nair S, Zhou Z, et al. 2012. Multilocus sequence typing as a replacement for serotyping in Salmonella enterica. PLoS Pathog. 8:e1002776
-
(2012)
PLoS Pathog.
, vol.8
-
-
Achtman, M.1
Wain, J.2
Weill, F.-X.3
Nair, S.4
Zhou, Z.5
-
2
-
-
59949101604
-
Polyphasic characterization of xanthomonads pathogenic tomembers of the Anacardiaceae and their relatedness to species of Xanthomonas
-
Ah-You N, Gagnevin L, Grimont PA, Brisse S, Nesme X, et al. 2009. Polyphasic characterization of xanthomonads pathogenic tomembers of the Anacardiaceae and their relatedness to species of Xanthomonas. Int. J. Syst. Evol. Microbiol. 59:306-18
-
(2009)
Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 306-318
-
-
Ah-You, N.1
Gagnevin, L.2
Grimont, P.A.3
Brisse, S.4
Nesme, X.5
-
3
-
-
77749330016
-
PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes
-
Almeida NF, Yan S, Cai R, Clarke CR, Morris CE, et al. 2010. PAMDB, a multilocus sequence typing and analysis database and website for plant-associated microbes. Phytopathology 100:208-15
-
(2010)
Phytopathology
, vol.100
, pp. 208-215
-
-
Almeida, N.F.1
Yan, S.2
Cai, R.3
Clarke, C.R.4
Morris, C.E.5
-
4
-
-
45749118436
-
Genetic structure and biology of Xylella fastidiosa strains causing disease in citrus and coffee in Brazil
-
Almeida RP, Nascimento FE, Chau J, Prado SS, Tsai CW, et al. 2008. Genetic structure and biology of Xylella fastidiosa strains causing disease in citrus and coffee in Brazil. Appl. Environ.Microbiol. 74:3690-701
-
(2008)
Appl. Environ.Microbiol.
, vol.74
, pp. 3690-3701
-
-
Almeida, R.P.1
Nascimento, F.E.2
Chau, J.3
Prado, S.S.4
Tsai, C.W.5
-
5
-
-
21544448078
-
Evasion of Toll-like receptor 5 by flagellated bacteria
-
Andersen-Nissen E, Smith KD, Strobe KL, Barrett SLR, Cookson BT, et al. 2005. Evasion of Toll-like receptor 5 by flagellated bacteria. Proc. Natl. Acad. Sci. USA 102:9247-52
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 9247-9252
-
-
Andersen-Nissen, E.1
Smith, K.D.2
Strobe, K.L.3
Barrett, S.L.R.4
Cookson, B.T.5
-
7
-
-
27144540463
-
Are innate immune signaling pathways in plants and animals conserved?
-
Ausubel FM. 2005. Are innate immune signaling pathways in plants and animals conserved? Nat. Immunol. 6:973-79
-
(2005)
Nat. Immunol.
, vol.6
, pp. 973-979
-
-
Ausubel, F.M.1
-
9
-
-
79960944810
-
Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates
-
Baltrus DA, Nishimura MT, Romanchuk A, Chang JH, Shahid Mukhtar M, et al. 2011. Dynamic evolution of pathogenicity revealed by sequencing and comparative genomics of 19 Pseudomonas syringae isolates. PLoS Pathog. 7:e1002132
-
(2011)
PLoS Pathog.
, vol.7
-
-
Baltrus, D.A.1
Nishimura, M.T.2
Romanchuk, A.3
Chang, J.H.4
Shahid Mukhtar, M.5
-
10
-
-
84863952738
-
High-throughput genomic sequencing of cassava bacterial blight strains identifies conserved effectors to target for durable resistance
-
Bart R, Cohn M, Kassen A, McCallum EJ, Shybut M, et al. 2012. High-throughput genomic sequencing of cassava bacterial blight strains identifies conserved effectors to target for durable resistance. Proc. Natl. Acad. Sci. USA 109:E1972-79
-
(2012)
Proc. Natl. Acad. Sci. USA 109:E1972-79
-
-
Bart, R.1
Cohn, M.2
Kassen, A.3
McCallum, E.J.4
Shybut, M.5
-
11
-
-
0032723764
-
Chromosomal gene transfer by conjugation in the plant pathogen Xanthomonas axonopodis pv. Vesicatoria
-
Basim H, Stall RE, Minsavage GV, Jones JB. 1999. Chromosomal gene transfer by conjugation in the plant pathogen Xanthomonas axonopodis pv. vesicatoria. Phytopathology 89:1044-49
-
(1999)
Phytopathology
, vol.89
, pp. 1044-1049
-
-
Basim, H.1
Stall, R.E.2
Minsavage, G.V.3
Jones, J.B.4
-
12
-
-
80053582792
-
Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp
-
Bogdanove AJ, Koebnik R, Lu H, Furutani A, Angiuoli SV, et al. 2011. Two new complete genome sequences offer insight into host and tissue specificity of plant pathogenic Xanthomonas spp. J. Bacteriol. 193:5450-64
-
(2011)
J. Bacteriol.
, vol.193
, pp. 5450-5464
-
-
Bogdanove, A.J.1
Koebnik, R.2
Lu, H.3
Furutani, A.4
Angiuoli, S.V.5
-
13
-
-
65649123807
-
Innate immunity in plants: An arms race between pattern recognition receptors in plants and effectors in microbial pathogens
-
Boller T, He SY. 2009. Innate immunity in plants: an arms race between pattern recognition receptors in plants and effectors in microbial pathogens. Science 324:742-44
-
(2009)
Science
, vol.324
, pp. 742-744
-
-
Boller, T.1
He, S.Y.2
-
14
-
-
56349134885
-
Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA)
-
Brady C, Cleenwerck I, Venter S, Vancanneyt M, Swings J, Coutinho T. 2008. Phylogeny and identification of Pantoea species associated with plants, humans and the natural environment based on multilocus sequence analysis (MLSA). Syst. Appl. Microbiol. 31:447-60
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 447-460
-
-
Brady, C.1
Cleenwerck, I.2
Venter, S.3
Vancanneyt, M.4
Swings, J.5
Coutinho, T.6
-
15
-
-
70350501148
-
Pantoea vagans sp
-
Brady CL, Venter SN, Cleenwerck I, Engelbeen K, Vancanneyt M, et al. 2009. Pantoea vagans sp. nov., Pantoea eucalypti sp. nov., Pantoea deleyi sp. nov. and Pantoea anthophila sp. nov. Int. J. Syst. Evol. Microbiol. 59:2339-45
-
(2009)
Nov., Pantoea Eucalypti Sp. Nov., Pantoea Deleyi Sp. Nov. and Pantoea Anthophila Sp. Nov. Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 2339-2345
-
-
Brady, C.L.1
Venter, S.N.2
Cleenwerck, I.3
Engelbeen, K.4
Vancanneyt, M.5
-
16
-
-
84903782478
-
Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites
-
In press. doi: 10.1111/1462-2920.12289
-
Buhlmann A, Dreo T, Rezzonico F, Pothier JF, Smits TH, et al. 2014. Phylogeography and population structure of the biologically invasive phytopathogen Erwinia amylovora inferred using minisatellites. Environ. Microbiol. In press. doi: 10.1111/1462-2920.12289
-
(2014)
Environ. Microbiol.
-
-
Buhlmann, A.1
Dreo, T.2
Rezzonico, F.3
Pothier, J.F.4
Smits, T.H.5
-
17
-
-
77949375230
-
Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv
-
Bui Thi Ngoc L, Verniere C, Jouen E, Ah-You N, Lefeuvre P, et al. 2010. Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv. bilvae. Int. J. Syst. Evol. Microbiol. 60:515-25
-
(2010)
Citri and Xanthomonas Campestris Pv. Bilvae. Int. J. Syst. Evol. Microbiol.
, vol.60
, pp. 515-525
-
-
Bui Thi Ngoc, L.1
Verniere, C.2
Jouen, E.3
Ah-You, N.4
Lefeuvre, P.5
-
18
-
-
79960028477
-
Multilocus sequence typing of Pseudomonas syringae sensu lato confirms previously described genomospecies and permits rapid identification of P
-
Bull CT, Clarke CR, Cai R, Vinatzer BA, Jardini TM, Koike ST. 2011. Multilocus sequence typing of Pseudomonas syringae sensu lato confirms previously described genomospecies and permits rapid identification of P. syringae pv. coriandricola and P. syringae pv. apii causing bacterial leaf spot on parsley. Phytopathology 101:847-58
-
(2011)
Syringae Pv. Coriandricola and P. Syringae Pv. Apii Causing Bacterial Leaf Spot on Parsley. Phytopathology
, vol.101
, pp. 847-858
-
-
Bull, C.T.1
Clarke, C.R.2
Cai, R.3
Vinatzer, B.A.4
Jardini, T.M.5
Koike, S.T.6
-
19
-
-
84874517965
-
Pseudomonas syringae pv
-
Butler MI, Stockwell PA, Black MA, Day RC, Lamont IL, Poulter RTM. 2013. Pseudomonas syringae pv. actinidiae from recent outbreaks of kiwifruit bacterial canker belong to different clones that originated in china. PLoS ONE 8:e57465
-
(2013)
Actinidiae from Recent Outbreaks of Kiwifruit Bacterial Canker Belong to Different Clones That Originated in China. PLoS ONE
, vol.8
-
-
Butler, M.I.1
Stockwell, P.A.2
Black, M.A.3
Day, R.C.4
Lamont, I.L.5
Poulter, R.T.M.6
-
20
-
-
80052380439
-
The plant pathogen Pseudomonas syringae pv
-
Cai R, Lewis J, Yan S, Liu H, Clarke CR, et al. 2011. The plant pathogen Pseudomonas syringae pv. tomato is genetically monomorphic and under strong selection to evade tomato immunity. PLoS Pathog. 7:e1002130
-
(2011)
Tomato Is Genetically Monomorphic and under Strong Selection to Evade Tomato Immunity. PLoS Pathog.
, vol.7
-
-
Cai, R.1
Lewis, J.2
Yan, S.3
Liu, H.4
Clarke, C.R.5
-
21
-
-
81155162492
-
Reconstructing host range evolution of bacterial plant pathogens using Pseudomonas syringae pv
-
Cai R, Yan S, Liu H, Leman S, Vinatzer BA. 2011. Reconstructing host range evolution of bacterial plant pathogens using Pseudomonas syringae pv. tomato and its close relatives as amodel. Infect. Genet. Evol. 11:1738-51
-
(2011)
Tomato and Its Close Relatives As Amodel. Infect. Genet. Evol.
, vol.11
, pp. 1738-1751
-
-
Cai, R.1
Yan, S.2
Liu, H.3
Leman, S.4
Vinatzer, B.A.5
-
23
-
-
0034644685
-
Flagellin from an incompatible strain of Pseudomonas avenae induces a resistance response in cultured rice cells
-
Che F-S, Nakajima Y, Tanaka N, Iwano M, Yoshida T, et al. 2000. Flagellin from an incompatible strain of Pseudomonas avenae induces a resistance response in cultured rice cells. J. Biol. Chem. 275:32347-56
-
(2000)
J. Biol. Chem.
, vol.275
, pp. 32347-32356
-
-
Che, F.-S.1
Nakajima, Y.2
Tanaka, N.3
Iwano, M.4
Yoshida, T.5
-
24
-
-
32944479048
-
Host-microbe interactions: Shaping the evolution of the plant immune response
-
Chisholm ST, Coaker G, Day B, Staskawicz BJ. 2006. Host-microbe interactions: shaping the evolution of the plant immune response. Cell 124:803-14
-
(2006)
Cell
, vol.124
, pp. 803-814
-
-
Chisholm, S.T.1
Coaker, G.2
Day, B.3
Staskawicz, B.J.4
-
25
-
-
75749111012
-
Pseudomonas syringae strains naturally lacking the classical P
-
Clarke CR, Cai R, Studholme DJ, Guttman DS, Vinatzer BA. 2010. Pseudomonas syringae strains naturally lacking the classical P. syringae hrp/hrc locus are common leaf colonizers equipped with an atypical type III secretion system. Mol. Plant-Microbe Interact. 23:198-210
-
(2010)
Syringae Hrp/hrc Locus Are Common Leaf Colonizers Equipped with An Atypical Type III Secretion System. Mol. Plant-Microbe Interact.
, vol.23
, pp. 198-210
-
-
Clarke, C.R.1
Cai, R.2
Studholme, D.J.3
Guttman, D.S.4
Vinatzer, B.A.5
-
26
-
-
84885431170
-
Allelic variation in two distinct Pseudomonas syringae flagellin epitopesmodulates the strength of plant immuneresponses but not bacterial motility
-
Clarke CR, Chinchilla D, Hind SR, Taguchi F, Miki Y, et al. 2013. Allelic variation in two distinct Pseudomonas syringae flagellin epitopesmodulates the strength of plant immuneresponses but not bacterial motility. New Phytol. 200:847-60
-
(2013)
New Phytol.
, vol.200
, pp. 847-860
-
-
Clarke, C.R.1
Chinchilla, D.2
Hind, S.R.3
Taguchi, F.4
Miki, Y.5
-
27
-
-
79952588420
-
Ralstonia solanacearum virulence increased following large interstrain gene transfers by natural transformation
-
Coupat-Goutaland B, Bernillon D, Guidot A, Prior P, Nesme X, Bertolla F. 2010. Ralstonia solanacearum virulence increased following large interstrain gene transfers by natural transformation. Mol. Plant- Microbe Interact. 24:497-505
-
(2010)
Mol. Plant- Microbe Interact.
, vol.24
, pp. 497-505
-
-
Coupat-Goutaland, B.1
Bernillon, D.2
Guidot, A.3
Prior, P.4
Nesme, X.5
Bertolla, F.6
-
28
-
-
84878735463
-
Population genomics of post-vaccine changes in pneumococcal epidemiology
-
Croucher NJ, Finkelstein JA, Pelton SI, Mitchell PK, Lee GM, et al. 2013. Population genomics of post-vaccine changes in pneumococcal epidemiology. Nat. Genet. 45:656-63
-
(2013)
Nat. Genet.
, vol.45
, pp. 656-663
-
-
Croucher, N.J.1
Finkelstein, J.A.2
Pelton, S.I.3
Mitchell, P.K.4
Lee, G.M.5
-
29
-
-
79251544864
-
Rapid pneumococcal evolution in response to clinical interventions
-
Croucher NJ, Harris SR, Fraser C, Quail MA, Burton J, et al. 2011. Rapid pneumococcal evolution in response to clinical interventions. Science 331:430-44
-
(2011)
Science
, vol.331
, pp. 430-444
-
-
Croucher, N.J.1
Harris, S.R.2
Fraser, C.3
Quail, M.A.4
Burton, J.5
-
30
-
-
84872185929
-
Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis
-
Cui Y, Yu C, Yan Y, Li D, Li Y, et al. 2013. Historical variations in mutation rate in an epidemic pathogen, Yersinia pestis. Proc. Natl. Acad. Sci. USA 110:577-82
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 577-582
-
-
Cui, Y.1
Yu, C.2
Yan, Y.3
Li, D.4
Li, Y.5
-
31
-
-
0037161811
-
Comparison of the genomes of two Xanthomonas pathogens with differing host specificities
-
da Silva ACR, Ferro JA, Reinach FC, Farah CS, Furlan LR, et al. 2002. Comparison of the genomes of two Xanthomonas pathogens with differing host specificities. Nature 417:459-63
-
(2002)
Nature
, vol.417
, pp. 459-463
-
-
Da Silva, A.C.R.1
Ferro, J.A.2
Reinach, F.C.3
Farah, C.S.4
Furlan, L.R.5
-
32
-
-
79951490217
-
Multilocus sequence analysis reveals the genetic diversity of European fruit tree phytoplasmas and supports the existence of inter-species recombination
-
Danet JL, Balakishiyeva G, Cimerman A, Sauvion N, Marie-Jeanne V, et al. 2011. Multilocus sequence analysis reveals the genetic diversity of European fruit tree phytoplasmas and supports the existence of inter-species recombination. Microbiology 157:438-50
-
(2011)
Microbiology
, vol.157
, pp. 438-450
-
-
Danet, J.L.1
Balakishiyeva, G.2
Cimerman, A.3
Sauvion, N.4
Marie-Jeanne, V.5
-
33
-
-
84881413993
-
Pivoting the plant immune system from dissection to deployment
-
Dangl JL, Horvath DM, Staskawicz BJ. 2013. Pivoting the plant immune system from dissection to deployment. Science 341:746-51
-
(2013)
Science
, vol.341
, pp. 746-751
-
-
Dangl, J.L.1
Horvath, D.M.2
Staskawicz, B.J.3
-
34
-
-
84874079141
-
Candidatus Phytoplasma pruni a novel taxon associated with X-disease of stone fruits, Prunus spp.: Multilocus characterization based on 16S rRNA, secY, and ribosomal protein genes
-
Davis RE, Zhao Y, Dally EL, Lee I-M, Jomantiene R, Douglas SM. 2013. "Candidatus Phytoplasma pruni" a novel taxon associated with X-disease of stone fruits, Prunus spp.: multilocus characterization based on 16S rRNA, secY, and ribosomal protein genes. Int. J. Syst. Evol. Microbiol. 63:766-76
-
(2013)
Int. J. Syst. Evol. Microbiol.
, vol.63
, pp. 766-776
-
-
Davis, R.E.1
Zhao, Y.2
Dally, E.L.3
Lee, I.-M.4
Jomantiene, R.5
Douglas, S.M.6
-
35
-
-
3042748124
-
A family of conserved bacterial effectors inhibits salicylic acid-mediated basal immunity and promotes disease necrosis in plants
-
DebRoy S, Thilmony R, Kwack Y-B, Nomura K, He SY. 2004. A family of conserved bacterial effectors inhibits salicylic acid-mediated basal immunity and promotes disease necrosis in plants. Proc. Natl. Acad. Sci. USA 101:9927-32
-
(2004)
Proc. Natl. Acad. Sci. USA
, vol.101
, pp. 9927-9932
-
-
Debroy, S.1
Thilmony, R.2
Kwack, Y.-B.3
Nomura, K.4
He, S.Y.5
-
36
-
-
60849083234
-
Phylogeny and identification of Pantoea species and typing of Pantoea agglomerans strains by multilocus gene sequencing
-
Deletoile A, Decre D, Courant S, Passet V, Audo J, et al. 2009. Phylogeny and identification of Pantoea species and typing of Pantoea agglomerans strains by multilocus gene sequencing. J. Clin. Microbiol. 47:300-10
-
(2009)
J. Clin. Microbiol.
, vol.47
, pp. 300-310
-
-
Deletoile, A.1
Decre, D.2
Courant, S.3
Passet, V.4
Audo, J.5
-
37
-
-
84862624898
-
Pseudomonas syringae naturally lacking the canonical type III secretion system are ubiquitous in nonagricultural habitats, are phylogenetically diverse and can be pathogenic
-
Diallo MD, Monteil CL, Vinatzer BA, Clarke CR, Glaux C, et al. 2012. Pseudomonas syringae naturally lacking the canonical type III secretion system are ubiquitous in nonagricultural habitats, are phylogenetically diverse and can be pathogenic. ISME J. 6:1325-35
-
(2012)
ISME J.
, vol.6
, pp. 1325-1335
-
-
Diallo, M.D.1
Monteil, C.L.2
Vinatzer, B.A.3
Clarke, C.R.4
Glaux, C.5
-
38
-
-
84865231395
-
Transforming clinical microbiology with bacterial genome sequencing
-
Didelot X, Bowden R, Wilson DJ, Peto TEA, Crook DW. 2012. Transforming clinical microbiology with bacterial genome sequencing. Nat. Rev. Genet. 13:601-12
-
(2012)
Nat. Rev. Genet.
, vol.13
, pp. 601-612
-
-
Didelot, X.1
Bowden, R.2
Wilson, D.J.3
Peto, T.E.A.4
Crook, D.W.5
-
39
-
-
77954143123
-
Impact of recombination on bacterial evolution
-
Didelot X, Maiden MCJ. 2010. Impact of recombination on bacterial evolution. Trends Microbiol. 18:315-22
-
(2010)
Trends Microbiol.
, vol.18
, pp. 315-322
-
-
Didelot, X.1
Maiden, M.C.J.2
-
40
-
-
0000296003
-
International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains
-
Dye DW, Bradbury JF, Goto M, Hayward AC, Lelliott RA, Schroth MN. 1980. International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains. Rev. Plant Pathol. 59:153-68
-
(1980)
Rev. Plant Pathol.
, vol.59
, pp. 153-168
-
-
Dye, D.W.1
Bradbury, J.F.2
Goto, M.3
Hayward, A.C.4
Lelliott, R.A.5
Schroth, M.N.6
-
41
-
-
84905490219
-
The population structure of pathogenic bacteria
-
ed. SC Stearns, JC Koella Oxford, UK: Oxford Univ. Press.
-
Dykhuizen D, Kalia A. 2007. The population structure of pathogenic bacteria. In Evolution in Health and Disease, ed. SC Stearns, JC Koella, pp. 185-98. Oxford, UK: Oxford Univ. Press.
-
(2007)
Evolution in Health and Disease
, pp. 185-198
-
-
Dykhuizen, D.1
Kalia, A.2
-
42
-
-
59149087908
-
Separable roles of the Pseudomonas syringae pv. Phaseolicola accessory protein HrpZ1 in ion-conducting pore formation and activation of plant immunity
-
Engelhardt S, Lee J, Gabler Y, Kemmerling B, Haapalainen M-L, et al. 2009. Separable roles of the Pseudomonas syringae pv. phaseolicola accessory protein HrpZ1 in ion-conducting pore formation and activation of plant immunity. Plant J. 57:706-17
-
(2009)
Plant J.
, vol.57
, pp. 706-717
-
-
Engelhardt, S.1
Lee, J.2
Gabler, Y.3
Kemmerling, B.4
Haapalainen, M.-L.5
-
43
-
-
79952538532
-
A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species
-
Fargier E, Fischer-Le Saux M, Manceau C. 2011. A multilocus sequence analysis of Xanthomonas campestris reveals a complex structure within crucifer-attacking pathovars of this species. Syst. Appl. Microbiol. 34:156-65
-
(2011)
Syst. Appl. Microbiol.
, vol.34
, pp. 156-165
-
-
Fargier, E.1
Fischer-Le Saux, M.2
Manceau, C.3
-
44
-
-
0035793056
-
Recombination within natural populations of pathogenic bacteria: Short-term empirical estimates and long-term phylogenetic consequences
-
Feil EJ, Holmes EC, Bessen DE, Chan M-S, Day NPJ, et al. 2001. Recombination within natural populations of pathogenic bacteria: Short-term empirical estimates and long-term phylogenetic consequences. Proc. Natl. Acad. Sci. USA 98:182-87
-
(2001)
Proc. Natl. Acad. Sci. USA
, vol.98
, pp. 182-187
-
-
Feil, E.J.1
Holmes, E.C.2
Bessen, D.E.3
Chan, M.-S.4
Day, N.P.J.5
-
45
-
-
0037458657
-
Molecular sensing of bacteria in plants: The highly conserved RNA-binding motif RNP-1 of bacterial cold shock proteins is recognized as an elicitor signal in tobacco
-
Felix G, Boller T. 2003. Molecular sensing of bacteria in plants: the highly conserved RNA-binding motif RNP-1 of bacterial cold shock proteins is recognized as an elicitor signal in tobacco. J. Biol. Chem. 278:6201-8
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 6201-6208
-
-
Felix, G.1
Boller, T.2
-
46
-
-
0033136465
-
Plants have a sensitive perception system for the most conserved domain of bacterial flagellin
-
Felix G, Duran JD, Volko S, Boller T. 1999. Plants have a sensitive perception system for the most conserved domain of bacterial flagellin. Plant J. 18:265-76
-
(1999)
Plant J.
, vol.18
, pp. 265-276
-
-
Felix, G.1
Duran, J.D.2
Volko, S.3
Boller, T.4
-
47
-
-
84864503694
-
Plant-bacterial pathogen interactions mediated by type III effectors
-
Feng F, Zhou J-M. 2012. Plant-bacterial pathogen interactions mediated by type III effectors. Curr. Opin. Plant Biol. 15:469-76
-
(2012)
Curr. Opin. Plant Biol.
, vol.15
, pp. 469-476
-
-
Feng, F.1
Zhou, J.-M.2
-
48
-
-
68649109673
-
Multilocus sequence typing reveals two evolutionary lineages of Acidovorax avenae subsp. Citrulli
-
Feng J, Schuenzel EL, Li J, Schaad NW. 2009. Multilocus sequence typing reveals two evolutionary lineages of Acidovorax avenae subsp. citrulli. Phytopathology 99:913-20
-
(2009)
Phytopathology
, vol.99
, pp. 913-920
-
-
Feng, J.1
Schuenzel, E.L.2
Li, J.3
Schaad, N.W.4
-
49
-
-
70350231901
-
Contributions of the effector gene hopQ1-1 to differences in host range between Pseudomonas syringae pv
-
Ferrante P, Clarke CR, Cavanaugh KA, Michelmore RW, Buonaurio R, Vinatzer BA. 2009. Contributions of the effector gene hopQ1-1 to differences in host range between Pseudomonas syringae pv. phaseolicola and P. syringae pv. tabaci. Mol. Plant Pathol. 10:837-42
-
(2009)
Phaseolicola and P. Syringae Pv. Tabaci. Mol. Plant Pathol.
, vol.10
, pp. 837-842
-
-
Ferrante, P.1
Clarke, C.R.2
Cavanaugh, K.A.3
Michelmore, R.W.4
Buonaurio, R.5
Vinatzer, B.A.6
-
50
-
-
79961188356
-
Interfamily transfer of tomato ve1 mediates verticillium resistance in Arabidopsis
-
Fradin EF, Abd-El-Haliem A, Masini L, van den Berg GCM, Joosten MHAJ, Thomma BPHJ. 2011. Interfamily transfer of tomato ve1 mediates verticillium resistance in Arabidopsis. Plant Physiol. 156:2255-65
-
(2011)
Plant Physiol.
, vol.156
, pp. 2255-2265
-
-
Fradin, E.F.1
Abd-El-Haliem, A.2
Masini, L.3
Van Den Berg, G.C.M.4
Joosten, M.H.A.J.5
Thomma, B.P.H.J.6
-
51
-
-
33846625056
-
Recombination and the nature of bacterial speciation
-
Fraser C, Hanage WP, Spratt BG. 2007. Recombination and the nature of bacterial speciation. Science 315:476-80
-
(2007)
Science
, vol.315
, pp. 476-480
-
-
Fraser, C.1
Hanage, W.P.2
Spratt, B.G.3
-
52
-
-
0032900419
-
DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp
-
Gardan L, Shafik H, Belouin S, Broch R, Grimont F, Grimont PAD. 1999. DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959). Int. J. Syst. Bacteriol. 49:469-78
-
(1999)
Nov. and Pseudomonas Cannabina Sp. Nov. (Ex Sutic and Dowson 1959). Int. J. Syst. Bacteriol.
, vol.49
, pp. 469-478
-
-
Gardan, L.1
Shafik, H.2
Belouin, S.3
Broch, R.4
Grimont, F.5
Grimont, P.A.D.6
-
53
-
-
0034459551
-
Molecular evolution of virulence in natural field strains of Xanthomonas campestris pv. Vesicatoria
-
Gassmann W, Dahlbeck D, Chesnokova O, Minsavage GV, Jones JB, Staskawicz BJ. 2000. Molecular evolution of virulence in natural field strains of Xanthomonas campestris pv. vesicatoria. J. Bacteriol. 182:7053-59
-
(2000)
J. Bacteriol.
, vol.182
, pp. 7053-7059
-
-
Gassmann, W.1
Dahlbeck, D.2
Chesnokova, O.3
Minsavage, G.V.4
Jones, J.B.5
Staskawicz, B.J.6
-
54
-
-
84868331743
-
Pathogenomics of the Ralstonia solanacearum species complex
-
Genin S, Denny TP. 2012. Pathogenomics of the Ralstonia solanacearum species complex. Annu. Rev. Phytopathol. 50:67-89
-
(2012)
Annu. Rev. Phytopathol.
, vol.50
, pp. 67-89
-
-
Genin, S.1
Denny, T.P.2
-
56
-
-
57149083870
-
Niche-specificity and the variable fraction of the pectobacterium pan-genome
-
Glasner JD, Marquez-Villavicencio M, Kim HS, Jahn CE, Ma B, et al. 2008. Niche-specificity and the variable fraction of the pectobacterium pan-genome. Mol. Plant-Microbe Interact. 21:1549-60
-
(2008)
Mol. Plant-Microbe Interact.
, vol.21
, pp. 1549-1560
-
-
Glasner, J.D.1
Marquez-Villavicencio, M.2
Kim, H.S.3
Jahn, C.E.4
Ma, B.5
-
57
-
-
13744251729
-
Genetic diversity, recombination and cryptic clades in Pseudomonas viridiflava infecting natural populations of Arabidopsis thaliana
-
Goss EM, Kreitman M, Bergelson J. 2005. Genetic diversity, recombination and cryptic clades in Pseudomonas viridiflava infecting natural populations of Arabidopsis thaliana. Genetics 169:21-35
-
(2005)
Genetics
, vol.169
, pp. 21-35
-
-
Goss, E.M.1
Kreitman, M.2
Bergelson, J.3
-
58
-
-
33750097480
-
Subterfuge and manipulation: Type III effector proteins of phytopathogenic bacteria
-
Grant SR, Fisher EJ, Chang JH, Mole BM, Dangl JL. 2006. Subterfuge and manipulation: type III effector proteins of phytopathogenic bacteria. Annu. Rev. Microbiol. 60:425-49
-
(2006)
Annu. Rev. Microbiol.
, vol.60
, pp. 425-449
-
-
Grant, S.R.1
Fisher, E.J.2
Chang, J.H.3
Mole, B.M.4
Dangl, J.L.5
-
59
-
-
77956324972
-
Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv
-
Green S, Studholme DJ, Laue BE, Dorati F, Lovell H, et al. 2010. Comparative genome analysis provides insights into the evolution and adaptation of Pseudomonas syringae pv. aesculi on Aesculus hippocastanum. PLoS ONE 5:e10224
-
(2010)
Aesculi on Aesculus Hippocastanum. PLoS ONE
, vol.5
-
-
Green, S.1
Studholme, D.J.2
Laue, B.E.3
Dorati, F.4
Lovell, H.5
-
60
-
-
0036500995
-
A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae
-
Guttman DS, Vinatzer BA, Sarkar SF, Ranall MV, Kettler G, Greenberg JT. 2002. A functional screen for the type III (Hrp) secretome of the plant pathogen Pseudomonas syringae. Science 295:1722-26
-
(2002)
Science
, vol.295
, pp. 1722-1726
-
-
Guttman, D.S.1
Vinatzer, B.A.2
Sarkar, S.F.3
Ranall, M.V.4
Kettler, G.5
Greenberg, J.T.6
-
61
-
-
69949188053
-
A "repertoire for repertoire" hypothesis: Repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas
-
Hajri A, Brin C, Hunault G, Lardeux F, Lemaire C, et al. 2009. A "repertoire for repertoire" hypothesis: repertoires of type three effectors are candidate determinants of host specificity in Xanthomonas. PLoS ONE 4:e6632
-
(2009)
PLoS ONE
, vol.4
-
-
Hajri, A.1
Brin, C.2
Hunault, G.3
Lardeux, F.4
Lemaire, C.5
-
62
-
-
84858700188
-
Multilocus sequence analysis- and amplified fragment length polymorphism-based characterization of xanthomonads associated with bacterial spot of tomato and pepper and their relatedness to Xanthomonas species
-
Hamza AA, Robene-Soustrade I, Jouen E, Lefeuvre P, Chiroleu F, et al. 2012. Multilocus sequence analysis- and amplified fragment length polymorphism-based characterization of xanthomonads associated with bacterial spot of tomato and pepper and their relatedness to Xanthomonas species. Syst. Appl. Microbiol. 35:183-90
-
(2012)
Syst. Appl. Microbiol.
, vol.35
, pp. 183-190
-
-
Hamza, A.A.1
Robene-Soustrade, I.2
Jouen, E.3
Lefeuvre, P.4
Chiroleu, F.5
-
64
-
-
48349124258
-
High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi
-
Holt KE, Parkhill J, Mazzoni CJ, Roumagnac P, Weill F-X, et al. 2008. High-throughput sequencing provides insights into genome variation and evolution in Salmonella Typhi. Nat. Genet. 40:987-93
-
(2008)
Nat. Genet.
, vol.40
, pp. 987-993
-
-
Holt, K.E.1
Parkhill, J.2
Mazzoni, C.J.3
Roumagnac, P.4
Weill, F.-X.5
-
65
-
-
25144466838
-
Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae
-
Hwang MS, Morgan RL, Sarkar SF, Wang PW, Guttman DS. 2005. Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. Appl. Environ. Microbiol. 71:5182-91
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 5182-5191
-
-
Hwang, M.S.1
Morgan, R.L.2
Sarkar, S.F.3
Wang, P.W.4
Guttman, D.S.5
-
66
-
-
84862830543
-
Multilocus microsatellite analysis of "candidatus Liberibacter asiaticus" associated with citrus Huanglongbing worldwide
-
Islam M-S, Glynn J, Bai Y, Duan Y-P, Coletta-Filho H, et al. 2012. Multilocus microsatellite analysis of "Candidatus Liberibacter asiaticus" associated with citrus Huanglongbing worldwide. BMC Microbiol. 12:39
-
(2012)
BMC Microbiol.
, vol.12
, pp. 39
-
-
Islam, M.-S.1
Glynn, J.2
Bai, Y.3
Duan, Y.-P.4
Coletta-Filho, H.5
-
67
-
-
80053921532
-
The influence of the accessory genome on bacterial pathogen evolution
-
Jackson RW, Vinatzer B, Arnold DL, Dorus S, Murillo J. 2011. The influence of the accessory genome on bacterial pathogen evolution. Mobile Genet. Elem. 1:55-65
-
(2011)
Mobile Genet. Elem.
, vol.1
, pp. 55-65
-
-
Jackson, R.W.1
Vinatzer, B.2
Arnold, D.L.3
Dorus, S.4
Murillo, J.5
-
68
-
-
84870769820
-
Phylogenetic analysis and polyphasic characterization of Clavibacter michiganensis strains isolated from tomato seeds reveal that nonpathogenic strains are distinct from C. Michiganensis subsp. Michiganensis
-
Jacques MA, Durand K, Orgeur G, Balidas S, Fricot C, et al. 2012. Phylogenetic analysis and polyphasic characterization of Clavibacter michiganensis strains isolated from tomato seeds reveal that nonpathogenic strains are distinct from C. michiganensis subsp. michiganensis. Appl. Environ. Microbiol. 78:8388-402
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 8388-8402
-
-
Jacques, M.A.1
Durand, K.2
Orgeur, G.3
Balidas, S.4
Fricot, C.5
-
69
-
-
33751100626
-
The plant immune system
-
Jones JDG, Dangl JL. 2006. The plant immune system. Nature 444:323-29
-
(2006)
Nature
, vol.444
, pp. 323-329
-
-
Jones, J.D.G.1
Dangl, J.L.2
-
71
-
-
67649600424
-
Phylogeny and virulence of naturally occurring type III secretion system-deficient Pectobacterium strains
-
Kim HS, Ma B, Perna NT, Charkowski AO. 2009. Phylogeny and virulence of naturally occurring type III secretion system-deficient Pectobacterium strains. Appl. Environ. Microbiol. 75:4539-49
-
(2009)
Appl. Environ. Microbiol.
, vol.75
, pp. 4539-4549
-
-
Kim, H.S.1
Ma, B.2
Perna, N.T.3
Charkowski, A.O.4
-
72
-
-
79961053793
-
Natural competence and recombination in the plant pathogen Xylella fastidiosa
-
Kung SH, Almeida RP. 2011. Natural competence and recombination in the plant pathogen Xylella fastidiosa. Appl. Environ. Microbiol. 77:5278-84
-
(2011)
Appl. Environ. Microbiol.
, vol.77
, pp. 5278-5284
-
-
Kung, S.H.1
Almeida, R.P.2
-
74
-
-
15044341489
-
The N terminus of bacterial elongation factor tu elicits innate immunity in Arabidopsis plants
-
Kunze G, Zipfel C, Robatzek S, Niehaus K, Boller T, Felix G. 2004. The N terminus of bacterial elongation factor tu elicits innate immunity in Arabidopsis plants. Plant Cell 16:3496-507
-
(2004)
Plant Cell
, vol.16
, pp. 3496-3507
-
-
Kunze, G.1
Zipfel, C.2
Robatzek, S.3
Niehaus, K.4
Boller, T.5
Felix, G.6
-
75
-
-
77950666930
-
Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance
-
Lacombe S, Rougon-Cardoso A, Sherwood E, Peeters N, Dahlbeck D, et al. 2010. Interfamily transfer of a plant pattern-recognition receptor confers broad-spectrum bacterial resistance. Nat. Biotechnol. 28:365-69
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 365-369
-
-
Lacombe, S.1
Rougon-Cardoso, A.2
Sherwood, E.3
Peeters, N.4
Dahlbeck, D.5
-
77
-
-
84893676227
-
Methods to study PAMP-triggered immunity in Brassica species
-
Lloyd SR, Schoonbeek H-j, Trick M, Zipfel C, Ridout CJ. 2013. Methods to study PAMP-triggered immunity in Brassica species. Mol. Plant-Microbe Interact. 27:286-95
-
(2013)
Mol. Plant-Microbe Interact.
, vol.27
, pp. 286-295
-
-
Lloyd, S.R.1
Schoonbeek, H.J.2
Trick, M.3
Zipfel, C.4
Ridout, C.J.5
-
78
-
-
70349269029
-
Bacterial evolution by genomic island transfer occurs via DNA transformation in planta
-
Lovell HC, Mansfield JW, Godfrey SAC, Jackson RW, Hancock JT, Arnold DL. 2009. Bacterial evolution by genomic island transfer occurs via DNA transformation in planta. Curr. Biol. 19:1586-90
-
(2009)
Curr. Biol.
, vol.19
, pp. 1586-1590
-
-
Lovell, H.C.1
Mansfield, J.W.2
Godfrey, S.A.C.3
Jackson, R.W.4
Hancock, J.T.5
Arnold, D.L.6
-
79
-
-
13144252236
-
Multilocus sequence typing: A portable approach to the identification of clones within populations of pathogenic microorganisms
-
Maiden MCJ, Bygraves JA, Feil E, Morelli G, Russell JE, et al. 1998. Multilocus sequence typing: a portable approach to the identification of clones within populations of pathogenic microorganisms. Proc. Natl. Acad. Sci. USA 95:3140-45
-
(1998)
Proc. Natl. Acad. Sci. USA
, vol.95
, pp. 3140-3145
-
-
Maiden, M.C.J.1
Bygraves, J.A.2
Feil, E.3
Morelli, G.4
Russell, J.E.5
-
80
-
-
84872252485
-
Fire blight: Applied genomic insights of the pathogen and host
-
Malnoy M, Martens S, Norelli JL, Barny MA, Sundin GW, et al. 2012. Fire blight: applied genomic insights of the pathogen and host. Annu. Rev. Phytopathol. 50:475-94
-
(2012)
Annu. Rev. Phytopathol.
, vol.50
, pp. 475-494
-
-
Malnoy, M.1
Martens, S.2
Norelli, J.L.3
Barny, M.A.4
Sundin, G.W.5
-
81
-
-
84873608021
-
Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved core
-
Mann RA, Smits THM, Buhlmann A, Blom J, Goesmann A, et al. 2013. Comparative genomics of 12 strains of Erwinia amylovora identifies a pan-genome with a large conserved core. PLoS ONE 8:e55644
-
(2013)
PLoS ONE
, vol.8
-
-
Mann, R.A.1
Smits, T.H.M.2
Buhlmann, A.3
Blom, J.4
Goesmann, A.5
-
82
-
-
84860776735
-
Pseudomonas syringae pv
-
Mazzaglia A, Studholme DJ, Taratufolo MC, Cai R, Almeida NF, et al. 2012. Pseudomonas syringae pv. actinidiae (PSA) isolates from recent bacterial canker of kiwifruit outbreaks belong to the same genetic lineage. PLoS ONE 7:e57464
-
(2012)
Actinidiae (PSA) Isolates from Recent Bacterial Canker of Kiwifruit Outbreaks Belong to the Same Genetic Lineage. PLoS ONE
, vol.7
-
-
Mazzaglia, A.1
Studholme, D.J.2
Taratufolo, M.C.3
Cai, R.4
Almeida, N.F.5
-
83
-
-
84861896440
-
Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus
-
McAdam PR, Templeton KE, Edwards GF, Holden MTG, Feil EJ, et al. 2012. Molecular tracing of the emergence, adaptation, and transmission of hospital-associated methicillin-resistant Staphylococcus aureus. Proc. Natl. Acad. Sci. USA 109:9107-12
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 9107-9112
-
-
McAdam, P.R.1
Templeton, K.E.2
Edwards, G.F.3
Holden, M.T.G.4
Feil, E.J.5
-
84
-
-
84858234134
-
Identification of innate immunity elicitors using molecular signatures of natural selection
-
McCann HC, Nahal H, Thakur S, Guttman DS. 2012. Identification of innate immunity elicitors using molecular signatures of natural selection. Proc. Natl. Acad. Sci. USA 109:4215-20
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 4215-4220
-
-
McCann, H.C.1
Nahal, H.2
Thakur, S.3
Guttman, D.S.4
-
85
-
-
84884758493
-
Genomic analysis of the kiwifruit pathogen Pseudomonas syringae pv
-
McCann HC, Rikkerink EHA, Bertels F, Fiers M, Lu A, et al. 2013. Genomic analysis of the kiwifruit pathogen Pseudomonas syringae pv. actinidiae provides insight into the origins of an emergent plant disease. PLoS Pathog. 9:e1003503
-
(2013)
Actinidiae Provides Insight into the Origins of An Emergent Plant Disease. PLoS Pathog.
, vol.9
-
-
McCann, H.C.1
Rikkerink, E.H.A.2
Bertels, F.3
Fiers, M.4
Lu, A.5
-
86
-
-
79952478288
-
Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads
-
Mhedbi-Hajri N, Darrasse A, Pigne S, Durand K, Fouteau S, et al. 2011. Sensing and adhesion are adaptive functions in the plant pathogenic xanthomonads. BMC Evol. Biol. 11:67
-
(2011)
BMC Evol. Biol.
, vol.11
, pp. 67
-
-
Mhedbi-Hajri, N.1
Darrasse, A.2
Pigne, S.3
Durand, K.4
Fouteau, S.5
-
87
-
-
84874711044
-
Evolutionary history of the plant pathogenic bacterium Xanthomonas axonopodis
-
Mhedbi-Hajri N, Hajri A, Boureau T, Darrasse A, Durand K, et al. 2013. Evolutionary history of the plant pathogenic bacterium Xanthomonas axonopodis. PLoS ONE 8:e58474
-
(2013)
PLoS ONE
, vol.8
-
-
Mhedbi-Hajri, N.1
Hajri, A.2
Boureau, T.3
Darrasse, A.4
Durand, K.5
-
88
-
-
84881435452
-
Impacts of resistance gene genetics, function, and evolution on a durable future
-
Michelmore RW, Christopoulou M, Caldwell KS. 2013. Impacts of resistance gene genetics, function, and evolution on a durable future. Annu. Rev. Phytopathol. 51:291-319
-
(2013)
Annu. Rev. Phytopathol.
, vol.51
, pp. 291-319
-
-
Michelmore, R.W.1
Christopoulou, M.2
Caldwell, K.S.3
-
89
-
-
84868457606
-
Characterization of Clavibacter michiganensis subsp
-
Milijasevic-Marcic S, Gartemann K-H, Frohwitter J, Eichenlaub R, Todorovic B, et al. 2012. Characterization of Clavibacter michiganensis subsp. michiganensis strains from recent outbreaks of bacterial wilt and canker in Serbia. Eur. J. Plant Pathol. 134:697-711
-
(2012)
Michiganensis Strains from Recent Outbreaks of Bacterial Wilt and Canker in Serbia. Eur. J. Plant Pathol.
, vol.134
, pp. 697-711
-
-
Milijasevic-Marcic, S.1
Gartemann, K.-H.2
Frohwitter, J.3
Eichenlaub, R.4
Todorovic, B.5
-
90
-
-
41949092518
-
Naturally occurring nonpathogenic isolates of the plant pathogen Pseudomonas syringae lack a type III secretion system and effector gene orthologues
-
Mohr TJ, Liu H, Yan S, Morris CE, Castillo JA, et al. 2008. Naturally occurring nonpathogenic isolates of the plant pathogen Pseudomonas syringae lack a type III secretion system and effector gene orthologues. J. Bacteriol. 190:2858-70
-
(2008)
J. Bacteriol.
, vol.190
, pp. 2858-2870
-
-
Mohr, T.J.1
Liu, H.2
Yan, S.3
Morris, C.E.4
Castillo, J.A.5
-
91
-
-
84864520212
-
Plant pattern recognition receptor complexes at the plasma membrane
-
Monaghan J, Zipfel C. 2012. Plant pattern recognition receptor complexes at the plasma membrane. Curr. Opin. Plant Biol. 15:349-57
-
(2012)
Curr. Opin. Plant Biol.
, vol.15
, pp. 349-357
-
-
Monaghan, J.1
Zipfel, C.2
-
92
-
-
84880297601
-
Non-agricultural reservoirs contribute to emergence and evolution of Pseudomonas syringae crop pathogens
-
Monteil CL, Cai R, Liu H, Mechan Llontop ME, Leman S, et al. 2013. Non-agricultural reservoirs contribute to emergence and evolution of Pseudomonas syringae crop pathogens. New Phytol. 199:800-11
-
(2013)
New Phytol.
, vol.199
, pp. 800-811
-
-
Monteil, C.L.1
Cai, R.2
Liu, H.3
Mechan Llontop, M.E.4
Leman, S.5
-
93
-
-
84864385600
-
Emigration of the plant pathogen Pseudomonas syringae from leaf litter contributes to its population dynamics in alpine snowpack
-
Monteil CL, Guilbaud C, Glaux C, Lafolie F, Soubeyrand S, Morris CE. 2012. Emigration of the plant pathogen Pseudomonas syringae from leaf litter contributes to its population dynamics in alpine snowpack. Environ. Microbiol. 14:2099-112
-
(2012)
Environ. Microbiol.
, vol.14
, pp. 2099-2112
-
-
Monteil, C.L.1
Guilbaud, C.2
Glaux, C.3
Lafolie, F.4
Soubeyrand, S.5
Morris, C.E.6
-
94
-
-
77957331293
-
Microevolution of Helicobacter pylori during prolonged infection of single hosts and within families
-
Morelli G, Didelot X, Kusecek B, Schwarz S, Bahlawane C, et al. 2010. Microevolution of Helicobacter pylori during prolonged infection of single hosts and within families. PLoS Genet. 6:e1001036
-
(2010)
PLoS Genet.
, vol.6
-
-
Morelli, G.1
Didelot, X.2
Kusecek, B.3
Schwarz, S.4
Bahlawane, C.5
-
95
-
-
78649470145
-
Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity
-
Morelli G, Song Y, Mazzoni CJ, Eppinger M, Roumagnac P, et al. 2010. Yersinia pestis genome sequencing identifies patterns of global phylogenetic diversity. Nat. Genet. 42:1140-43
-
(2010)
Nat. Genet.
, vol.42
, pp. 1140-1143
-
-
Morelli, G.1
Song, Y.2
Mazzoni, C.J.3
Eppinger, M.4
Roumagnac, P.5
-
96
-
-
84881401888
-
The life history of Pseudomonas syringae: Linking agriculture and Earth system processes
-
Morris CE, Monteil CL, Berge O. 2013. The life history of Pseudomonas syringae: linking agriculture and Earth system processes. Annu. Rev. Phytopathol. 51:85-104
-
(2013)
Annu. Rev. Phytopathol.
, vol.51
, pp. 85-104
-
-
Morris, C.E.1
Monteil, C.L.2
Berge, O.3
-
97
-
-
79551680560
-
Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand
-
Morris CE, Sands DC, Vanneste JL, Montarry J, Oakley B, et al. 2010. Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand. mBio 1:1-10
-
(2010)
MBio
, vol.1
, pp. 1-10
-
-
Morris, C.E.1
Sands, D.C.2
Vanneste, J.L.3
Montarry, J.4
Oakley, B.5
-
98
-
-
40249113894
-
The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle
-
Morris CE, Sands DC, Vinatzer BA, Glaux C, Guilbaud C, et al. 2008. The life history of the plant pathogen Pseudomonas syringae is linked to the water cycle. ISME J. 2:321-34
-
(2008)
ISME J.
, vol.2
, pp. 321-334
-
-
Morris, C.E.1
Sands, D.C.2
Vinatzer, B.A.3
Glaux, C.4
Guilbaud, C.5
-
99
-
-
84866991543
-
Contamination risks in work with synthetic peptides: Flg22 as an example of a pirate in commercial peptide preparations
-
Mueller K, Chinchilla D, Albert M, Jehle AK, Kalbacher H, et al. 2012. Contamination risks in work with synthetic peptides: flg22 as an example of a pirate in commercial peptide preparations. Plant Cell 24:3193-97
-
(2012)
Plant Cell
, vol.24
, pp. 3193-3197
-
-
Mueller, K.1
Chinchilla, D.2
Albert, M.3
Jehle, A.K.4
Kalbacher, H.5
-
100
-
-
58749092473
-
Divergent selection and heterogeneous genomic divergence
-
Nosil P, Funk DJ, Ortiz-Barrientos D. 2009. Divergent selection and heterogeneous genomic divergence. Mol. Ecol. 18:375-402
-
(2009)
Mol. Ecol.
, vol.18
, pp. 375-402
-
-
Nosil, P.1
Funk, D.J.2
Ortiz-Barrientos, D.3
-
101
-
-
77954065669
-
A timescale for evolution, population expansion, and spatial spread of an emerging clone of methicillin-resistant Staphylococcus aureus
-
NubelU, Dordel J, Kurt K, Strommenger B, Westh H, et al. 2010. A timescale for evolution, population expansion, and spatial spread of an emerging clone of methicillin-resistant Staphylococcus aureus. PLoS Pathog. 6:e100855
-
(2010)
PLoS Pathog.
, vol.6
-
-
Nubel, U.1
Dordel, J.2
Kurt, K.3
Strommenger, B.4
Westh, H.5
-
102
-
-
52949129115
-
Frequent emergence and limited geographic dispersal of methicillin-resistant Staphylococcus aureus
-
Nubel U, Roumagnac P, Feldkamp M, Song J-H, Ko KS, et al. 2008. Frequent emergence and limited geographic dispersal of methicillin-resistant Staphylococcus aureus. Proc.Natl. Acad. Sci. USA105:14130-35
-
(2008)
Proc.Natl. Acad. Sci. USA105
, pp. 14130-14135
-
-
Nubel, U.1
Roumagnac, P.2
Feldkamp, M.3
Song, J.-H.4
Ko, K.S.5
-
103
-
-
78649504381
-
Population genomic analysis of a bacterial plant pathogen: Novel insight into the origin of Pierce's disease of grapevine in the U.S
-
Nunney L, Yuan X, Bromley R, Hartung J, Montero-Astua M, et al. 2010. Population genomic analysis of a bacterial plant pathogen: novel insight into the origin of Pierce's disease of grapevine in the U.S. PLoS ONE 5:e15488
-
(2010)
PLoS ONE
, vol.5
-
-
Nunney, L.1
Yuan, X.2
Bromley, R.3
Hartung, J.4
Montero-Astua, M.5
-
104
-
-
84864081840
-
Detecting genetic introgression: High levels of intersubspecific recombination found in Xylella fastidiosa in Brazil
-
Nunney L, Yuan X, Bromley RE, Stouthamer R. 2012. Detecting genetic introgression: high levels of intersubspecific recombination found in Xylella fastidiosa in Brazil. Appl. Environ. Microbiol. 78:4702-14
-
(2012)
Appl. Environ. Microbiol.
, vol.78
, pp. 4702-4714
-
-
Nunney, L.1
Yuan, X.2
Bromley, R.E.3
Stouthamer, R.4
-
105
-
-
84870811273
-
Revised phylogeny and novel horizontally acquired virulence determinants of the model soft rot phytopathogen Pectobacterium wasabiae SCC3193
-
Nykyri J, Niemi O, Koskinen P, Nokso-Koivisto J, Pasanen M, et al. 2012. Revised phylogeny and novel horizontally acquired virulence determinants of the model soft rot phytopathogen Pectobacterium wasabiae SCC3193. PLoS Pathog. 8:e1003013
-
(2012)
PLoS Pathog.
, vol.8
-
-
Nykyri, J.1
Niemi, O.2
Koskinen, P.3
Nokso-Koivisto, J.4
Pasanen, M.5
-
106
-
-
84864580809
-
Extensive remodeling of the Pseudomonas syringae pv
-
O'Brien H, Thakur S, Gong Y, Fung P, Zhang J, et al. 2012. Extensive remodeling of the Pseudomonas syringae pv. avellanae type III secretome associated with two independent host shifts onto hazelnut. BMC Microbiol. 12:141
-
(2012)
Avellanae Type III Secretome Associated with Two Independent Host Shifts onto Hazelnut. BMC Microbiol.
, vol.12
, pp. 141
-
-
O'Brien, H.1
Thakur, S.2
Gong, Y.3
Fung, P.4
Zhang, J.5
-
107
-
-
39049094525
-
The role of horizontal transfer in the evolution of a highly variable lipopolysaccharide biosynthesis locus in xanthomonads that infect rice, citrus and crucifers
-
Patil P, Bogdanove A, Sonti R. 2007. The role of horizontal transfer in the evolution of a highly variable lipopolysaccharide biosynthesis locus in xanthomonads that infect rice, citrus and crucifers. BMC Evol. Biol. 7:243
-
(2007)
BMC Evol. Biol.
, vol.7
, pp. 243
-
-
Patil, P.1
Bogdanove, A.2
Sonti, R.3
-
108
-
-
29044432423
-
Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants
-
Pitman AR, Jackson RW, Mansfield JW, Kaitell V, Thwaites R, Arnold DL. 2005. Exposure to host resistance mechanisms drives evolution of bacterial virulence in plants. Curr. Biol. 15:2230-35
-
(2005)
Curr. Biol.
, vol.15
, pp. 2230-2235
-
-
Pitman, A.R.1
Jackson, R.W.2
Mansfield, J.W.3
Kaitell, V.4
Thwaites, R.5
Arnold, D.L.6
-
109
-
-
79952477092
-
Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper
-
Potnis N, Krasileva K, Chow V, Almeida NF, Patil PB, et al. 2011. Comparative genomics reveals diversity among xanthomonads infecting tomato and pepper. BMC Genomics 12:146
-
(2011)
BMC Genomics
, vol.12
, pp. 146
-
-
Potnis, N.1
Krasileva, K.2
Chow, V.3
Almeida, N.F.4
Patil, P.B.5
-
110
-
-
84879673810
-
Recent development in the phylogeny and classification of Ralstonia solanacearum
-
ed. T Momol, JB Jones Leuven, Belgium: ISHS-Acta Horticulturae
-
Prior P, Fegan M. 2005. Recent development in the phylogeny and classification of Ralstonia solanacearum. In Proceedings of the First International Symposium on Tomato Diseases, ed. T Momol, JB Jones, pp. 127-36. Leuven, Belgium: ISHS-Acta Horticulturae
-
(2005)
Proceedings of the First International Symposium on Tomato Diseases
, pp. 127-136
-
-
Prior, P.1
Fegan, M.2
-
111
-
-
0029908527
-
Fastidious xylem-limited bacterial plant pathogens
-
Purcell AH, Hopkins DL. 1996. Fastidious xylem-limited bacterial plant pathogens. Annu. Rev. Phytopathol. 34:131-51
-
(1996)
Annu. Rev. Phytopathol.
, vol.34
, pp. 131-151
-
-
Purcell, A.H.1
Hopkins, D.L.2
-
112
-
-
77954582930
-
Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence
-
Remenant B, Coupat-Goutaland B, Guidot A, Cellier G, Wicker E, et al. 2010. Genomes of three tomato pathogens within the Ralstonia solanacearum species complex reveal significant evolutionary divergence. BMC Genomics 11:379
-
(2010)
BMC Genomics
, vol.11
, pp. 379
-
-
Remenant, B.1
Coupat-Goutaland, B.2
Guidot, A.3
Cellier, G.4
Wicker, E.5
-
113
-
-
80052525932
-
Ralstonia syzygii, the blood disease bacterium and some asian R
-
Remenant B, de Cambiaire J-C, Cellier G, Jacobs JM, Mangenot S, et al. 2011. Ralstonia syzygii, the blood disease bacterium and some asian R. solanacearum strains form a single genomic species despite divergent lifestyles. PLoS ONE 6:e24356
-
(2011)
Solanacearum Strains Form A Single Genomic Species Despite Divergent Lifestyles. PLoS ONE
, vol.6
-
-
Remenant, B.1
De Cambiaire, J.-C.2
Cellier, G.3
Jacobs, J.M.4
Mangenot, S.5
-
114
-
-
77749314807
-
So similar, yet so different: Uncovering distinctive features in the genomes of Salmonella enterica serovars Typhimurium and Typhi
-
Sabbagh SC, Forest CG, Lepage C, Leclerc J-M, Daigle F. 2010. So similar, yet so different: uncovering distinctive features in the genomes of Salmonella enterica serovars Typhimurium and Typhi. FEMS Microbiol. Lett. 305:1-13
-
(2010)
FEMS Microbiol. Lett.
, vol.305
, pp. 1-13
-
-
Sabbagh, S.C.1
Forest, C.G.2
Lepage, C.3
Leclerc, J.-M.4
Daigle, F.5
-
115
-
-
33750471586
-
Comparative genomics of host-specific virulence in Pseudomonas syringae
-
Sarkar SF, Gordon JS, Martin GB, Guttman DS. 2006. Comparative genomics of host-specific virulence in Pseudomonas syringae. Genetics 174:1041-56
-
(2006)
Genetics
, vol.174
, pp. 1041-1056
-
-
Sarkar, S.F.1
Gordon, J.S.2
Martin, G.B.3
Guttman, D.S.4
-
116
-
-
1642319596
-
Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen
-
Sarkar SF, Guttman DS. 2004. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Appl. Environ. Microbiol. 70:1999-2012
-
(2004)
Appl. Environ. Microbiol.
, vol.70
, pp. 1999-2012
-
-
Sarkar, S.F.1
Guttman, D.S.2
-
117
-
-
29144526081
-
Multilocus sequence type system for the plant pathogen Xylella fastidiosa and relative contributions of recombination and point mutation to clonal diversity
-
Scally M, Schuenzel EL, Stouthamer R, Nunney L. 2005. Multilocus sequence type system for the plant pathogen Xylella fastidiosa and relative contributions of recombination and point mutation to clonal diversity. Appl. Environ. Microbiol. 71:8491-99
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 8491-8499
-
-
Scally, M.1
Schuenzel, E.L.2
Stouthamer, R.3
Nunney, L.4
-
118
-
-
22144448608
-
A multigene phylogenetic study of clonal diversity and divergence inNorth American strains of the plant pathogen Xylella fastidiosa
-
Schuenzel EL, Scally M, Stouthamer R, Nunney L. 2005. A multigene phylogenetic study of clonal diversity and divergence inNorth American strains of the plant pathogen Xylella fastidiosa. Appl. Environ. Microbiol. 71:3832-39
-
(2005)
Appl. Environ. Microbiol.
, vol.71
, pp. 3832-3839
-
-
Schuenzel, E.L.1
Scally, M.2
Stouthamer, R.3
Nunney, L.4
-
119
-
-
84859499489
-
Population genomics of early events in the ecological differentiation of bacteria
-
Shapiro BJ, Friedman J, Cordero OX, Preheim SP, Timberlake SC, et al. 2012. Population genomics of early events in the ecological differentiation of bacteria. Science 336:48-51
-
(2012)
Science
, vol.336
, pp. 48-51
-
-
Shapiro, B.J.1
Friedman, J.2
Cordero, O.X.3
Preheim, S.P.4
Timberlake, S.C.5
-
120
-
-
53649106195
-
Next-generation DNA sequencing
-
Shendure J, Ji H. 2008. Next-generation DNA sequencing. Nat. Biotechnol. 26:1135-45
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1135-1145
-
-
Shendure, J.1
Ji, H.2
-
121
-
-
84880366261
-
Genome-wide association study identifies vitamin B-5 biosynthesis as a host specificity factor in Campylobacter
-
Sheppard SK, Didelot X, Meric G, Torralbo A, Jolley KA, et al. 2013. Genome-wide association study identifies vitamin B-5 biosynthesis as a host specificity factor in Campylobacter. Proc. Natl. Acad. Sci. USA 110:11923-27
-
(2013)
Proc. Natl. Acad. Sci. USA
, vol.110
, pp. 11923-11927
-
-
Sheppard, S.K.1
Didelot, X.2
Meric, G.3
Torralbo, A.4
Jolley, K.A.5
-
123
-
-
0347776208
-
Toll-like receptor 5 recognizes a conserved site on flagellin required for protofilament formation and bacterial motility
-
Smith KD, Andersen-Nissen E, Hayashi F, Strobe K, Bergman MA, et al. 2003. Toll-like receptor 5 recognizes a conserved site on flagellin required for protofilament formation and bacterial motility. Nat. Immunol. 4:1247-53
-
(2003)
Nat. Immunol.
, vol.4
, pp. 1247-1253
-
-
Smith, K.D.1
Andersen-Nissen, E.2
Hayashi, F.3
Strobe, K.4
Bergman, M.A.5
-
124
-
-
79960307422
-
Evolutionary insights from Erwinia amylovora genomics
-
Smits THM, Rezzonico F, Duffy B. 2011. Evolutionary insights from Erwinia amylovora genomics. J. Biotechnol. 155:34-39
-
(2011)
J. Biotechnol.
, vol.155
, pp. 34-39
-
-
Smits, T.H.M.1
Rezzonico, F.2
Duffy, B.3
-
125
-
-
77949295507
-
Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp
-
Smits THM, Rezzonico F, Kamber T, Blom J, Goesmann A, et al. 2010. Complete genome sequence of the fire blight pathogen Erwinia amylovora CFBP 1430 and comparison to other Erwinia spp. Mol. Plant-Microbe Interact. 23:384-93
-
(2010)
Mol. Plant-Microbe Interact.
, vol.23
, pp. 384-393
-
-
Smits, T.H.M.1
Rezzonico, F.2
Kamber, T.3
Blom, J.4
Goesmann, A.5
-
127
-
-
33646847604
-
Within-species flagellin polymorphism in Xanthomonas campestris pv campestris and its impact on elicitation of Arabidopsis FLAGELLIN SENSING2-dependent defenses
-
Sun W, Dunning FM, Pfund C, Weingarten R, Bent AF. 2006. Within-species flagellin polymorphism in Xanthomonas campestris pv campestris and its impact on elicitation of Arabidopsis FLAGELLIN SENSING2-dependent defenses. Plant Cell 18:764-79
-
(2006)
Plant Cell
, vol.18
, pp. 764-779
-
-
Sun, W.1
Dunning, F.M.2
Pfund, C.3
Weingarten, R.4
Bent, A.F.5
-
128
-
-
0037406659
-
Flagellin from an incompatible strain of Acidovorax avenae mediates H2O2 generation accompanying hypersensitive cell death and expression of PAL, Cht-1, and PBZ1, but not of LOX in rice
-
Tanaka N, Che F-S, Watanabe N, Fujiwara S, Takayama S, Isogai A. 2003. Flagellin from an incompatible strain of Acidovorax avenae mediates H2O2 generation accompanying hypersensitive cell death and expression of PAL, Cht-1, and PBZ1, but not of LOX in rice. Mol. Plant-Microbe Interact. 16:422-28
-
(2003)
Mol. Plant-Microbe Interact.
, vol.16
, pp. 422-428
-
-
Tanaka, N.1
Che, F.-S.2
Watanabe, N.3
Fujiwara, S.4
Takayama, S.5
Isogai, A.6
-
129
-
-
79960437304
-
Degeneration of hrpZ gene in Pseudomonas syringae pv
-
Tsunemi K, Taguchi F, Marutani M, Watanabe-Sugimoto M, Inagaki Y, et al. 2011. Degeneration of hrpZ gene in Pseudomonas syringae pv. tabaci to evade tobacco defence: an arms race between tobacco and its bacterial pathogen. Mol. Plant Pathol. 12:709-14
-
(2011)
Tabaci to Evade Tobacco Defence: An Arms Race between Tobacco and Its Bacterial Pathogen. Mol. Plant Pathol.
, vol.12
, pp. 709-714
-
-
Tsunemi, K.1
Taguchi, F.2
Marutani, M.3
Watanabe-Sugimoto, M.4
Inagaki, Y.5
-
130
-
-
84861386202
-
Flagellin perception varies quantitatively in Arabidopsis thaliana and its relatives
-
Vetter MM, Kronholm I, He F, Haweker H, Reymond M, et al. 2012. Flagellin perception varies quantitatively in Arabidopsis thaliana and its relatives. Mol. Biol. Evol. 29:1655-67
-
(2012)
Mol. Biol. Evol.
, vol.29
, pp. 1655-1667
-
-
Vetter, M.M.1
Kronholm, I.2
He, F.3
Haweker, H.4
Reymond, M.5
-
131
-
-
80051774062
-
Understanding and exploiting late blight resistance in the age of effectors
-
Vleeshouwers VGAA, Raffaele S, Vossen JH, Champouret N, Oliva R, et al. 2011. Understanding and exploiting late blight resistance in the age of effectors. Annu. Rev. Phytopathol. 49:507-31
-
(2011)
Annu. Rev. Phytopathol.
, vol.49
, pp. 507-531
-
-
Vgaa, V.1
Raffaele, S.2
Vossen, J.H.3
Champouret, N.4
Oliva, R.5
-
133
-
-
84865073011
-
Genome-wide sequencing reveals two major sub-lineages in the genetically monomorphic pathogen Xanthomonas campestris pv
-
Wasukira A, Tayebwa J, Thwaites R, Paszkiewicz K, Aritua V, et al. 2012. Genome-wide sequencing reveals two major sub-lineages in the genetically monomorphic pathogen Xanthomonas campestris pv. musacearum. Genes 3:361-77
-
(2012)
Musacearum. Genes
, vol.3
, pp. 361-377
-
-
Wasukira, A.1
Tayebwa, J.2
Thwaites, R.3
Paszkiewicz, K.4
Aritua, V.5
-
134
-
-
84859894446
-
Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA
-
Wicker E, Lefeuvre P, de Cambiaire JC, Lemaire C, Poussier S, Prior P. 2012. Contrasting recombination patterns and demographic histories of the plant pathogen Ralstonia solanacearum inferred from MLSA. ISME J. 6:961-74
-
(2012)
ISME J.
, vol.6
, pp. 961-974
-
-
Wicker, E.1
Lefeuvre, P.2
De Cambiaire, J.C.3
Lemaire, C.4
Poussier, S.5
Prior, P.6
-
135
-
-
60649107475
-
Population dynamics of Pseudomonas syringae pv. Tomato strains on tomato cultivars Rio Grande and Rio Grande-Pto under field conditions
-
Willis DK, Kinscherf TG. 2009. Population dynamics of Pseudomonas syringae pv. tomato strains on tomato cultivars Rio Grande and Rio Grande-Pto under field conditions. J. Phytopathol. 157:219-27
-
(2009)
J. Phytopathol.
, vol.157
, pp. 219-227
-
-
Willis, D.K.1
Kinscherf, T.G.2
-
136
-
-
44249087418
-
Role of recombination in the evolution of the model plant pathogen Pseudomonas syringae pv
-
Yan S, Liu H, Mohr TJ, Jenrette J, Chiodini R, et al. 2008. Role of recombination in the evolution of the model plant pathogen Pseudomonas syringae pv. tomato DC3000, a very atypical tomato strain. Appl. Environ. Microbiol. 74:3171-81
-
(2008)
Tomato DC3000, A Very Atypical Tomato Strain. Appl. Environ. Microbiol.
, vol.74
, pp. 3171-3181
-
-
Yan, S.1
Liu, H.2
Mohr, T.J.3
Jenrette, J.4
Chiodini, R.5
-
137
-
-
84863338394
-
Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease
-
Young BC, Golubchik T, Batty EM, Fung R, Larner-Svensson H, et al. 2012. Evolutionary dynamics of Staphylococcus aureus during progression from carriage to disease. Proc. Natl. Acad. Sci. USA 109:4550-55
-
(2012)
Proc. Natl. Acad. Sci. USA
, vol.109
, pp. 4550-4555
-
-
Young, B.C.1
Golubchik, T.2
Batty, E.M.3
Fung, R.4
Larner-Svensson, H.5
-
139
-
-
77953205346
-
Multilocus sequence typing of Xylella fastidiosa causing Pierce's disease and oleander leaf scorch in the United States
-
Yuan X, Morano L, Bromley R, Spring-Pearson S, Stouthamer R, Nunney L. 2010. Multilocus sequence typing of Xylella fastidiosa causing Pierce's disease and oleander leaf scorch in the United States. Phytopathology 100:601-11
-
(2010)
Phytopathology
, vol.100
, pp. 601-611
-
-
Yuan, X.1
Morano, L.2
Bromley, R.3
Spring-Pearson, S.4
Stouthamer, R.5
Nunney, L.6
|