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Volumn 21, Issue 12, 2008, Pages 1549-1560

Niche-specificity and the variable fraction of the Pectobacterium pan-genome

Author keywords

Erwinia; Host range; Soft rot

Indexed keywords

BACTERIAL DNA;

EID: 57149083870     PISSN: 08940282     EISSN: None     Source Type: Journal    
DOI: 10.1094/MPMI-21-12-1549     Document Type: Article
Times cited : (94)

References (59)
  • 4
    • 0028501235 scopus 로고
    • Erwinia chrysanthemi hrp genes and their involvement in soft rot pathogenesis and elicitation of the hypersensitive response
    • Bauer, D. W., Bogdanove, A. J., Beer, S. V., and Collmer, A. 1994. Erwinia chrysanthemi hrp genes and their involvement in soft rot pathogenesis and elicitation of the hypersensitive response. Mol. Plant-Microbe Interact. 7(5):573-81.
    • (1994) Mol. Plant-Microbe Interact , vol.7 , Issue.5 , pp. 573-581
    • Bauer, D.W.1    Bogdanove, A.J.2    Beer, S.V.3    Collmer, A.4
  • 5
    • 3342994863 scopus 로고    scopus 로고
    • Bell, K. S., Sebaihia, M., Pritchard, L., Holden, M. T. G., Hyman, L. J., Holeva, M. C., Thomson, N. R., Bentley, S. D., Churcher, L. J. C., Mungall, K., Atkin, R., Bason, N., Brooks, K., Chillingworth, T., Clark, K., Doggett, J., Fraser, A., Hance, Z., Hauser, H., Jagels, K., Moule, S., Norbertczak, H., Ormond, D., Price, C., Quail, M. A., Sanders, M., Walker, D., Whitehead, S., Salmond, G. P. C., Birch, P. R. J., Parkhill, J., and Toth, I. K. 2004. Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp atroseptica and characterization of virulence factors. Proc. Natl. Acad. Sci. U.S.A. 101(30):11105-11110.
    • Bell, K. S., Sebaihia, M., Pritchard, L., Holden, M. T. G., Hyman, L. J., Holeva, M. C., Thomson, N. R., Bentley, S. D., Churcher, L. J. C., Mungall, K., Atkin, R., Bason, N., Brooks, K., Chillingworth, T., Clark, K., Doggett, J., Fraser, A., Hance, Z., Hauser, H., Jagels, K., Moule, S., Norbertczak, H., Ormond, D., Price, C., Quail, M. A., Sanders, M., Walker, D., Whitehead, S., Salmond, G. P. C., Birch, P. R. J., Parkhill, J., and Toth, I. K. 2004. Genome sequence of the enterobacterial phytopathogen Erwinia carotovora subsp atroseptica and characterization of virulence factors. Proc. Natl. Acad. Sci. U.S.A. 101(30):11105-11110.
  • 6
    • 0033028398 scopus 로고    scopus 로고
    • Pseudomonas syringae phytotoxins: Mode of action, regulation, and biosynthesis by peptide and polyketide synthetases
    • Bender, C. L., Alarcon-Chaidez, F., and Gross, D. C. 1999. Pseudomonas syringae phytotoxins: Mode of action, regulation, and biosynthesis by peptide and polyketide synthetases. Microbiol. Mol. Biol. Rev. 63(2):266-292.
    • (1999) Microbiol. Mol. Biol. Rev , vol.63 , Issue.2 , pp. 266-292
    • Bender, C.L.1    Alarcon-Chaidez, F.2    Gross, D.C.3
  • 7
    • 0031923066 scopus 로고    scopus 로고
    • Erwinia amylovora secretes DspE, a pathogenicity factor and functional AvrE homolog, through the Hrp (type III secretion) pathway
    • Bogdanove, A. J., Bauer, D. W., and Beer, S. V. 1998. Erwinia amylovora secretes DspE, a pathogenicity factor and functional AvrE homolog, through the Hrp (type III secretion) pathway. J. Bacteriol. 180(8):2244-2247.
    • (1998) J. Bacteriol , vol.180 , Issue.8 , pp. 2244-2247
    • Bogdanove, A.J.1    Bauer, D.W.2    Beer, S.V.3
  • 8
    • 20144384250 scopus 로고    scopus 로고
    • Identification of a new quorum-sensing-controlled virulence factor in Erwinia carotovora subsp. atroseptica secreted via the type II targeting pathway
    • Corbett, M., Virtue, S., Bell, K., Birch, P., Burr, T., Hyman, L., Lilley, K., Poock, S., Toth, I., and Salmond, G. 2005. Identification of a new quorum-sensing-controlled virulence factor in Erwinia carotovora subsp. atroseptica secreted via the type II targeting pathway. Mol. Plant-Microbe Interact. 18(4):334-342.
    • (2005) Mol. Plant-Microbe Interact , vol.18 , Issue.4 , pp. 334-342
    • Corbett, M.1    Virtue, S.2    Bell, K.3    Birch, P.4    Burr, T.5    Hyman, L.6    Lilley, K.7    Poock, S.8    Toth, I.9    Salmond, G.10
  • 9
    • 3543051830 scopus 로고    scopus 로고
    • Mauve: Multiple alignment of conserved genomic sequence with rearrangements
    • Darling, A. C., Mau, B., Blattner, F. R., and Perna, N. T. 2004. Mauve: Multiple alignment of conserved genomic sequence with rearrangements. Genome Res. 14:1394-1403.
    • (2004) Genome Res , vol.14 , pp. 1394-1403
    • Darling, A.C.1    Mau, B.2    Blattner, F.R.3    Perna, N.T.4
  • 11
    • 0026012225 scopus 로고
    • Characterization, localization and transmembrane organization of the three proteins PrtD, PrtE and PrtF necessary for protease secretion by the gram-negative bacterium Erwinia chrysanthemi
    • Delepelaire, P., and Wandersman, C. 1991. Characterization, localization and transmembrane organization of the three proteins PrtD, PrtE and PrtF necessary for protease secretion by the gram-negative bacterium Erwinia chrysanthemi. Mol. Microbiol. 5(10):2427-2434.
    • (1991) Mol. Microbiol , vol.5 , Issue.10 , pp. 2427-2434
    • Delepelaire, P.1    Wandersman, C.2
  • 12
    • 1542269689 scopus 로고    scopus 로고
    • Characterization of atypical Erwinia carotovora strains causing blackleg of potato in Brazil
    • Duarte, V., de Boer, S. H., Ward, L. J., and de Oliveira, A. M. 2004. Characterization of atypical Erwinia carotovora strains causing blackleg of potato in Brazil. J. Appl. Microbiol. 96(3):535-545.
    • (2004) J. Appl. Microbiol , vol.96 , Issue.3 , pp. 535-545
    • Duarte, V.1    de Boer, S.H.2    Ward, L.J.3    de Oliveira, A.M.4
  • 14
    • 0037360648 scopus 로고    scopus 로고
    • Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. Nov. and Pectobacterium wasabiae sp. nov
    • Gardan, L., Gouy, C., Christen, R., and Samson, R. 2003. Elevation of three subspecies of Pectobacterium carotovorum to species level: Pectobacterium atrosepticum sp. nov., Pectobacterium betavasculorum sp. Nov. and Pectobacterium wasabiae sp. nov. Int. J. Syst. Evol. Microbiol. 53:381-391.
    • (2003) Int. J. Syst. Evol. Microbiol , vol.53 , pp. 381-391
    • Gardan, L.1    Gouy, C.2    Christen, R.3    Samson, R.4
  • 17
    • 33645038565 scopus 로고    scopus 로고
    • The phytopathogen Dickeya dadantii (Erwinia chrysanthemi 3937) is a pathogen of the pea aphid
    • Grenier, A. M., Duport, G., Pages, S., Condemine, G., and Rahbe, Y. 2006. The phytopathogen Dickeya dadantii (Erwinia chrysanthemi 3937) is a pathogen of the pea aphid. Appl. Environ. Microbiol. 72:1956-1965.
    • (2006) Appl. Environ. Microbiol , vol.72 , pp. 1956-1965
    • Grenier, A.M.1    Duport, G.2    Pages, S.3    Condemine, G.4    Rahbe, Y.5
  • 18
    • 0005562631 scopus 로고
    • Waste potato dumps as sources of insects contaminated with soft rot coliform bacteria in relation to re-contamination of pathogen-free potato stocks
    • Harrison, M., Quinn, C., Ann Sells, I., and Graham, D. 1977. Waste potato dumps as sources of insects contaminated with soft rot coliform bacteria in relation to re-contamination of pathogen-free potato stocks. Potato Res. 20(1):37-52.
    • (1977) Potato Res , vol.20 , Issue.1 , pp. 37-52
    • Harrison, M.1    Quinn, C.2    Ann Sells, I.3    Graham, D.4
  • 20
    • 0029893695 scopus 로고    scopus 로고
    • Role of the Yersinia pestis hemin storage (hms) locus in the transmission of plague by fleas
    • Hinnebusch, B. J., Perry, R. D., and Schwan, T. G. 1996. Role of the Yersinia pestis hemin storage (hms) locus in the transmission of plague by fleas. Science 273:367-370.
    • (1996) Science , vol.273 , pp. 367-370
    • Hinnebusch, B.J.1    Perry, R.D.2    Schwan, T.G.3
  • 21
    • 4143146354 scopus 로고    scopus 로고
    • Use of a pooled transposon mutation grid to demonstrate roles in disease development for Erwinia carotovora subsp atroseptica putative type III secreted effector (DspE/A) and helper (HrpN) proteins
    • Holeva, M. C., Bell, K. S., Hyman, L. J., Avrova, A. O., Whisson, S. C., Birch, P. R. J., and Toth, I. K. 2004. Use of a pooled transposon mutation grid to demonstrate roles in disease development for Erwinia carotovora subsp atroseptica putative type III secreted effector (DspE/A) and helper (HrpN) proteins. Mol. Plant-Microbe Interact. 17(9):943-950.
    • (2004) Mol. Plant-Microbe Interact , vol.17 , Issue.9 , pp. 943-950
    • Holeva, M.C.1    Bell, K.S.2    Hyman, L.J.3    Avrova, A.O.4    Whisson, S.C.5    Birch, P.R.J.6    Toth, I.K.7
  • 22
    • 24944453122 scopus 로고    scopus 로고
    • Joardar, V., Lindeberg, M., Jackson, R. W., Selengut, J., Dodson, R., Brinkac, L. M., Daugherty, S. C., DeBoy, R., Durkin, A. S., Giglio, M. G., Madupu, R., Nelson, W. C., Rosovitz, M. J., Sullivan, S., Crabtree, J., Creasy, T., Davidsen, T., Haft, D. H., Zafar, N., Zhou, L. W., Halpin, R., Holley, T., Khouri, H., Feldblyum, T., White, O., Fraser, C. M., Chatterjee, A. K., Cartinhour, S., Schneider, D. J., Mansfield, J., Collmer, A., and Buell, C. R. 2005. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J. Bacteriol. 187(18):6488-6498.
    • Joardar, V., Lindeberg, M., Jackson, R. W., Selengut, J., Dodson, R., Brinkac, L. M., Daugherty, S. C., DeBoy, R., Durkin, A. S., Giglio, M. G., Madupu, R., Nelson, W. C., Rosovitz, M. J., Sullivan, S., Crabtree, J., Creasy, T., Davidsen, T., Haft, D. H., Zafar, N., Zhou, L. W., Halpin, R., Holley, T., Khouri, H., Feldblyum, T., White, O., Fraser, C. M., Chatterjee, A. K., Cartinhour, S., Schneider, D. J., Mansfield, J., Collmer, A., and Buell, C. R. 2005. Whole-genome sequence analysis of Pseudomonas syringae pv. phaseolicola 1448A reveals divergence among pathovars in genes involved in virulence and transposition. J. Bacteriol. 187(18):6488-6498.
  • 23
    • 33751100626 scopus 로고    scopus 로고
    • The plant immune system
    • Jones, J. D. G., and Dangl, J. L. 2006. The plant immune system. Nature 444:323-329.
    • (2006) Nature , vol.444 , pp. 323-329
    • Jones, J.D.G.1    Dangl, J.L.2
  • 26
    • 24044455869 scopus 로고    scopus 로고
    • Margulies, M, Egholm, M, Altman, W. E, Attiya, S, Bader, J. S, Bemben, L. A, Berka, J, Braverman, M. S, Chen, Y. J, Chen, Z. T, Dewell, S. B, Du, L, Fierro, J. M, Gomes, X. V, Godwin, B. C, He, W, Helgesen, S, Ho, C. H, Irzyk, G. P, Jando, S. C, Alenquer, M. L. I, Jarvie, T. P, Jirage, K. B, Kim, J. B, Knight, J. R, Lanza, J. R, Leamon, J. H, Lefkowitz, S. M, Lei, M, Li, J. Lohman, K. L. Lu, H. Makhijani, V. B, McDade, K. E, McKenna, M. P, Myers, E. W. Nickerson, E, Nobile, J. R. Plant, R. Puc, B. P, Ronan, M. T, Roth, G. T, Sarkis, G. J, Simons, J. F, Simpson, J. W, Srinivasan, M, Tartaro, K. R, Tomasz, A, Vogt, K. A, Volkmer, G. A, Wang, S. H, Wang, Y, Weiner, M. P, Yu, P. G, Begley, R. F, and Rothberg, J. M. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437:376-380
    • Margulies, M., Egholm, M., Altman, W. E., Attiya, S., Bader, J. S., Bemben, L. A., Berka, J., Braverman, M. S., Chen, Y. J., Chen, Z. T., Dewell, S. B., Du, L., Fierro, J. M., Gomes, X. V., Godwin, B. C., He, W., Helgesen, S., Ho, C. H., Irzyk, G. P., Jando, S. C., Alenquer, M. L. I., Jarvie, T. P., Jirage, K. B., Kim, J. B., Knight, J. R., Lanza, J. R., Leamon, J. H., Lefkowitz, S. M., Lei, M., Li, J. Lohman, K. L. Lu, H. Makhijani, V. B., McDade, K. E., McKenna, M. P., Myers, E. W. Nickerson, E., Nobile, J. R. Plant, R. Puc, B. P., Ronan, M. T., Roth, G. T., Sarkis, G. J., Simons, J. F., Simpson, J. W., Srinivasan, M., Tartaro, K. R., Tomasz, A., Vogt, K. A., Volkmer, G. A., Wang, S. H., Wang, Y., Weiner, M. P., Yu, P. G., Begley, R. F., and Rothberg, J. M. 2005. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437:376-380.
  • 27
    • 0041823005 scopus 로고    scopus 로고
    • Isolation of an extracellular protease gene of Erwinia carotovora subsp. carotovora strain SCC3193 by transposon mutagenesis and the role of protease in phytopathogenicity
    • Marits, R., Koiv, V., Laasik, E., and Mae, A. 1999. Isolation of an extracellular protease gene of Erwinia carotovora subsp. carotovora strain SCC3193 by transposon mutagenesis and the role of protease in phytopathogenicity. Microbiology 145:1959-1966.
    • (1999) Microbiology , vol.145 , pp. 1959-1966
    • Marits, R.1    Koiv, V.2    Laasik, E.3    Mae, A.4
  • 29
    • 84985079691 scopus 로고
    • Soft rot Erwinia bacteria in the rhizosphere of weeds and crop plants in Colorado, United States and Scotland
    • McCarter-Zorner, N. J., Harrison, M. D., Franc, G. D., Quinn, C. E., Sells, I. A., and Graham, D. C. 1985. Soft rot Erwinia bacteria in the rhizosphere of weeds and crop plants in Colorado, United States and Scotland. J. Appl. Bacteriol. 59:357-368.
    • (1985) J. Appl. Bacteriol , vol.59 , pp. 357-368
    • McCarter-Zorner, N.J.1    Harrison, M.D.2    Franc, G.D.3    Quinn, C.E.4    Sells, I.A.5    Graham, D.C.6
  • 30
    • 0012365179 scopus 로고
    • Transmission of Erwinia carotovora var. atroseptica by Drosophila melanogaster Meig. I. Acquisition and transmission of the bacterium
    • Molina, J. M., Harrison, D., and Brewer, J. W. 1974. Transmission of Erwinia carotovora var. atroseptica by Drosophila melanogaster Meig. I. Acquisition and transmission of the bacterium. Am. Potato J. 51:245-250.
    • (1974) Am. Potato J , vol.51 , pp. 245-250
    • Molina, J.M.1    Harrison, D.2    Brewer, J.W.3
  • 31
    • 33845496790 scopus 로고    scopus 로고
    • Erwinia carotovora Evf antagonizes the elimination of bacteria in the gut of Drosophila larvae
    • Muniz, C. A., Jaillard, D., Lemaitre, B., and Boccard, F. 2007. Erwinia carotovora Evf antagonizes the elimination of bacteria in the gut of Drosophila larvae. Cell. Microbiol. 9(1):106-119.
    • (2007) Cell. Microbiol , vol.9 , Issue.1 , pp. 106-119
    • Muniz, C.A.1    Jaillard, D.2    Lemaitre, B.3    Boccard, F.4
  • 33
    • 0036483588 scopus 로고    scopus 로고
    • Temperature-dependent production of carotovoricin Er and pectin lyase in phytopathogenic Erwinia carotovora subsp. carotovora Er
    • Nguyen, H. A., Kaneko, J., and Kamio, Y. 2002. Temperature-dependent production of carotovoricin Er and pectin lyase in phytopathogenic Erwinia carotovora subsp. carotovora Er. Biosci. Biotechnol. Biochem. 66(2):444-447.
    • (2002) Biosci. Biotechnol. Biochem , vol.66 , Issue.2 , pp. 444-447
    • Nguyen, H.A.1    Kaneko, J.2    Kamio, Y.3
  • 34
    • 0035685617 scopus 로고    scopus 로고
    • DNA inversion in the tail fiber gene alters the host range specificity of carotovoricin Er, a phage-tail-like bacteriocin of phytopathogenic Erwinia carotovora subsp. carotovora Er
    • Nguyen, H. A., Tomita, T., Hirota, M., Kaneko, J., Hayashi, T., and Kamio, Y. 2001. DNA inversion in the tail fiber gene alters the host range specificity of carotovoricin Er, a phage-tail-like bacteriocin of phytopathogenic Erwinia carotovora subsp. carotovora Er. J. Bacteriol. 183(21):6274-6281.
    • (2001) J. Bacteriol , vol.183 , Issue.21 , pp. 6274-6281
    • Nguyen, H.A.1    Tomita, T.2    Hirota, M.3    Kaneko, J.4    Hayashi, T.5    Kamio, Y.6
  • 35
    • 0032564475 scopus 로고    scopus 로고
    • The pir gene of Erwinia chrysanthemi EC16 regulates hyperinduction of pectate lyase virulence genes in response to plant signals
    • Nomura, K., Nasser, W., Kawagishi, H., and Tsuyumu, S. 1998. The pir gene of Erwinia chrysanthemi EC16 regulates hyperinduction of pectate lyase virulence genes in response to plant signals. Proc. Natl. Acad. Sci. U.S.A. 95(24):14034-14039.
    • (1998) Proc. Natl. Acad. Sci. U.S.A , vol.95 , Issue.24 , pp. 14034-14039
    • Nomura, K.1    Nasser, W.2    Kawagishi, H.3    Tsuyumu, S.4
  • 37
    • 15744376062 scopus 로고    scopus 로고
    • Collaborative signaling by bacterial chemoreceptors
    • Parkinson, J. H., Ames, P., and Studdert, C. A. 2005. Collaborative signaling by bacterial chemoreceptors. Curr. Opin. Microbiol. 8:116-121.
    • (2005) Curr. Opin. Microbiol , vol.8 , pp. 116-121
    • Parkinson, J.H.1    Ames, P.2    Studdert, C.A.3
  • 38
    • 11844294109 scopus 로고    scopus 로고
    • The hrpK operon of Pseudomonas syringae pv. tomato DC3000 encodes two proteins secreted by the type III (Hrp) protein secretion system: HopB1 and HrpK, a putative type III translocator
    • Petnicki-Ocwieja, T., van Dijk, K., and Alfano, J. R. 2005. The hrpK operon of Pseudomonas syringae pv. tomato DC3000 encodes two proteins secreted by the type III (Hrp) protein secretion system: HopB1 and HrpK, a putative type III translocator. J. Bacteriol. 187(2):649-663.
    • (2005) J. Bacteriol , vol.187 , Issue.2 , pp. 649-663
    • Petnicki-Ocwieja, T.1    van Dijk, K.2    Alfano, J.R.3
  • 39
    • 57149096473 scopus 로고
    • Direct fluorescent antibody stain procedure applied to insect transmission of Erwinia carotovora
    • Phillips, J. A., and Kelman, A. 1982. Direct fluorescent antibody stain procedure applied to insect transmission of Erwinia carotovora. Phytopathology 72(7):898-901.
    • (1982) Phytopathology , vol.72 , Issue.7 , pp. 898-901
    • Phillips, J.A.1    Kelman, A.2
  • 40
    • 0030917519 scopus 로고    scopus 로고
    • Mutual control of the PecS/PecM couple, two proteins regulating virulence-factor synthesis in Erwinia chrysanthemi
    • Praillet, T., Reverchon, S., and Nasser, W. 1997. Mutual control of the PecS/PecM couple, two proteins regulating virulence-factor synthesis in Erwinia chrysanthemi. Mol. Microbiol. 24(4):803-814.
    • (1997) Mol. Microbiol , vol.24 , Issue.4 , pp. 803-814
    • Praillet, T.1    Reverchon, S.2    Nasser, W.3
  • 42
    • 34249796972 scopus 로고    scopus 로고
    • Quilis, J., Meynard, D., Vila, L., Aviles, F. X., Guiderdoni, E., and San Segundo, B. 2007. A potato carboxypeptidase inhibitor gene provides pathogen resistance in transgenic rice. Plant Biotechnol. J. 5(4):537-553.
    • Quilis, J., Meynard, D., Vila, L., Aviles, F. X., Guiderdoni, E., and San Segundo, B. 2007. A potato carboxypeptidase inhibitor gene provides pathogen resistance in transgenic rice. Plant Biotechnol. J. 5(4):537-553.
  • 43
    • 0034916081 scopus 로고    scopus 로고
    • Type III secretion contributes to the pathogenesis of the soft- rot pathogen Erwinia carotovora: Partial characterization of the hrp gene cluster
    • Rantakari, A., Virtaharju, O., Vahamiko, S., Taira, S., Palva, E. T., Saarilahti, H. T., and Romantschuk, M. 2001. Type III secretion contributes to the pathogenesis of the soft- rot pathogen Erwinia carotovora: Partial characterization of the hrp gene cluster. Mol. Plant-Microbe Interact. 14(8):962-968.
    • (2001) Mol. Plant-Microbe Interact , vol.14 , Issue.8 , pp. 962-968
    • Rantakari, A.1    Virtaharju, O.2    Vahamiko, S.3    Taira, S.4    Palva, E.T.5    Saarilahti, H.T.6    Romantschuk, M.7
  • 44
    • 0023472541 scopus 로고
    • An nptI-sacB-sacR cartridge for constructing directed, unmarked mutations in gram-negative bacteria by marker-exchange-eviction mutagenesis
    • Ried, J. L., and Collmer, A. 1987. An nptI-sacB-sacR cartridge for constructing directed, unmarked mutations in gram-negative bacteria by marker-exchange-eviction mutagenesis. Gene 57:239-246.
    • (1987) Gene , vol.57 , pp. 239-246
    • Ried, J.L.1    Collmer, A.2
  • 45
    • 0036791036 scopus 로고    scopus 로고
    • HecA is a member of a class of adhesins produced by diverse pathogenic bacteria and contributes to the attachment, aggregation, epidermal cell killing, and virulence phenotypes of Erwinia chrysanthemi EC16 on Nicotiana clevelandii seedlings
    • Rojas, C. M., Ham, J.-H., Deng, W.-L., Doyle, J. J., and Collmer, A. 2002. HecA is a member of a class of adhesins produced by diverse pathogenic bacteria and contributes to the attachment, aggregation, epidermal cell killing, and virulence phenotypes of Erwinia chrysanthemi EC16 on Nicotiana clevelandii seedlings. Proc. Natl. Acad. Sci. U.S.A. 99:13142-13147.
    • (2002) Proc. Natl. Acad. Sci. U.S.A , vol.99 , pp. 13142-13147
    • Rojas, C.M.1    Ham, J.-H.2    Deng, W.-L.3    Doyle, J.J.4    Collmer, A.5
  • 47
    • 25444524604 scopus 로고    scopus 로고
    • Tettelin, H, Masignani, V, Cieslewicz, M. J, Donati, C, Medini, D, Ward, N. L, Angiuoli, S. V, Crabtree, J, Jones, A. L, Durkin, A. S, Deboy, R. T, Davidsen, T. M, Mora, M, Scarselli, M, Margarit y Ros, I, Peterson, J. D, Hauser, C. R, Sundaram, J. P, Nelson, W. C, Madupu, R, Brinkac, L. M, Dodson, R. J, Rosovitz, M. J, Sullivan, S. A, Daugherty, S. C, Haft, D. H, Selengut, J, Gwinn, M. L, Zhou, L, Zafar, N, Khouri, H, Radune, D, Dimitrov, G, Watkins, K, O'Connor, K. J. Smith, S, Utterback, T. R, White, O, Rubens, C. E, Grandi, G, Madoff, L. C, Kasper, D. L, Telford, J. L, Wessels, M. R, Rappuoli, R, and Fraser. C. M. 2005. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial pan-genome. Proc. Natl. Acad. Sci. U.S.A. 102 (39):13950-13955
    • Tettelin, H., Masignani, V., Cieslewicz, M. J., Donati, C., Medini, D., Ward, N. L., Angiuoli, S. V., Crabtree, J., Jones, A. L., Durkin, A. S., Deboy, R. T., Davidsen, T. M., Mora, M., Scarselli, M., Margarit y Ros, I., Peterson, J. D., Hauser, C. R., Sundaram, J. P., Nelson, W. C., Madupu, R., Brinkac, L. M., Dodson, R. J., Rosovitz, M. J., Sullivan, S. A., Daugherty, S. C., Haft, D. H., Selengut, J., Gwinn, M. L., Zhou, L., Zafar, N., Khouri, H., Radune, D., Dimitrov, G., Watkins, K., O'Connor, K. J. Smith, S., Utterback, T. R., White, O., Rubens, C. E., Grandi, G., Madoff, L. C., Kasper, D. L., Telford, J. L., Wessels, M. R., Rappuoli, R., and Fraser. C. M. 2005. Genome analysis of multiple pathogenic isolates of Streptococcus agalactiae: Implications for the microbial "pan-genome." Proc. Natl. Acad. Sci. U.S.A. 102 (39):13950-13955.
  • 48
    • 27144440067 scopus 로고    scopus 로고
    • Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Buttner, D., Caldana, C., Gaigalat, L., Goesmann, A., Kay, S., Kirchner, O., Lanz, C., Linke, B., McHardy, A. C., Meyer, F., Mittenhuber, G., Nies, D. H., Niesbach-Klosgen, U., Patschkowski, T., Ruckert, C., Rupp, O., Schneiker, S., Schuster, S. C., Vorholter, F. J., Weber, E., Puhler, A., Bonas, U., Bartels, D., and Kaiser, O. 2005. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187(21):7254-7266.
    • Thieme, F., Koebnik, R., Bekel, T., Berger, C., Boch, J., Buttner, D., Caldana, C., Gaigalat, L., Goesmann, A., Kay, S., Kirchner, O., Lanz, C., Linke, B., McHardy, A. C., Meyer, F., Mittenhuber, G., Nies, D. H., Niesbach-Klosgen, U., Patschkowski, T., Ruckert, C., Rupp, O., Schneiker, S., Schuster, S. C., Vorholter, F. J., Weber, E., Puhler, A., Bonas, U., Bartels, D., and Kaiser, O. 2005. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 187(21):7254-7266.
  • 50
    • 33748959178 scopus 로고    scopus 로고
    • Comparative genomics reveals what makes an enterobacterial plant pathogen
    • Toth, I. K., Pritchard, L., and Birch, P. R. J. 2006. Comparative genomics reveals what makes an enterobacterial plant pathogen. Annu. Rev. Phytopathol. 44:305-336.
    • (2006) Annu. Rev. Phytopathol , vol.44 , pp. 305-336
    • Toth, I.K.1    Pritchard, L.2    Birch, P.R.J.3
  • 51
    • 33751007012 scopus 로고    scopus 로고
    • Genetic differences between blight-causing Erwinia species with differing host specificities, identified by suppression subtractive hybridization
    • Triplett, L. R., Zhao, Y., and Sundin, G. W. 2006. Genetic differences between blight-causing Erwinia species with differing host specificities, identified by suppression subtractive hybridization. Appl. Environ. Microbiol. 72(11):7359-7364.
    • (2006) Appl. Environ. Microbiol , vol.72 , Issue.11 , pp. 7359-7364
    • Triplett, L.R.1    Zhao, Y.2    Sundin, G.W.3
  • 52
    • 23144442407 scopus 로고    scopus 로고
    • Projector 2: Contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies
    • van Hijum, S. A. F. T., Zomer, A. L., Kuipers, O. P., and Kok, J. 2005. Projector 2: Contig mapping for efficient gap-closure of prokaryotic genome sequence assemblies. Nucleic Acids Res. 33:W560-W566.
    • (2005) Nucleic Acids Res , vol.33
    • van Hijum, S.A.F.T.1    Zomer, A.L.2    Kuipers, O.P.3    Kok, J.4
  • 53
    • 0025215915 scopus 로고
    • Secretion processing and activation of Erwinia chrysanthemi proteases
    • Wandersman, C., Delepelaire, P., and Letoffe, S. 1990. Secretion processing and activation of Erwinia chrysanthemi proteases. Biochimie 72(2-3):143-146.
    • (1990) Biochimie , vol.72 , Issue.2-3 , pp. 143-146
    • Wandersman, C.1    Delepelaire, P.2    Letoffe, S.3
  • 55
    • 40449093894 scopus 로고    scopus 로고
    • Characterization of probiotic Escherichia coli isolates with a novel pangenome microarray
    • Willenbrock, H., Hallin, P. F., Wassenaar, T. M., and Ussery, D. W. 2007. Characterization of probiotic Escherichia coli isolates with a novel pangenome microarray. Genome Biol. 8(12):R267.
    • (2007) Genome Biol , vol.8 , Issue.12
    • Willenbrock, H.1    Hallin, P.F.2    Wassenaar, T.M.3    Ussery, D.W.4
  • 56
    • 2442674450 scopus 로고    scopus 로고
    • Genomic diversity of Erwinia carotovora subsp. carotovora and its correlation with virulence
    • Yap, M.-N., Barak, J. D., and Charkowski, A. O. 2004. Genomic diversity of Erwinia carotovora subsp. carotovora and its correlation with virulence. Appl. Environ. Microbiol. 70:3013-3023.
    • (2004) Appl. Environ. Microbiol , vol.70 , pp. 3013-3023
    • Yap, M.-N.1    Barak, J.D.2    Charkowski, A.O.3
  • 57
    • 57149109168 scopus 로고    scopus 로고
    • The University of Wisconsin's ASAP database: asap.ahabs.wisc.edu/asap/ home.php
    • The University of Wisconsin's ASAP database: asap.ahabs.wisc.edu/asap/ home.php
  • 59
    • 57149085513 scopus 로고    scopus 로고
    • RAST (Rapid Annotation using Subsystem Technology) server: rast.nmpdr.org
    • RAST (Rapid Annotation using Subsystem Technology) server: rast.nmpdr.org


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.