-
1
-
-
37349022132
-
Pathological variations within Xanthomonas campestris pv. mangiferaeindicae support its separation into three distinct pathovars that can be distinguished by amplified fragment length polymorphism
-
Ah-You N., Gagnevin L., Chiroleu F., Jouen E., Neto J.R., Pruvost O. Pathological variations within Xanthomonas campestris pv. mangiferaeindicae support its separation into three distinct pathovars that can be distinguished by amplified fragment length polymorphism. Phytopathology 2007, 97:1568-1577.
-
(2007)
Phytopathology
, vol.97
, pp. 1568-1577
-
-
Ah-You, N.1
Gagnevin, L.2
Chiroleu, F.3
Jouen, E.4
Neto, J.R.5
Pruvost, O.6
-
2
-
-
59949101604
-
Polyphasic characterization of xanthomonads pathogenic to Anacardiaceae and their relatedness to different Xanthomonas species
-
Ah-You N., Gagnevin L., Grimont P.A.D., Brisse S., Nesme X., Chiroleu F., Bui Thi Ngoc L., Jouen E., Lefeuvre P., Vernière C., Pruvost O. Polyphasic characterization of xanthomonads pathogenic to Anacardiaceae and their relatedness to different Xanthomonas species. Int. J. Syst. Evol. Microbiol. 2009, 59:306-318.
-
(2009)
Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 306-318
-
-
Ah-You, N.1
Gagnevin, L.2
Grimont, P.A.D.3
Brisse, S.4
Nesme, X.5
Chiroleu, F.6
Bui Thi Ngoc, L.7
Jouen, E.8
Lefeuvre, P.9
Vernière, C.10
Pruvost, O.11
-
3
-
-
23944432866
-
Structure and origin of Xanthomonas arboricola pv. pruni populations causing bacterial spot of stone fruit trees in Western Europe
-
Boudon S., Manceau C., Notteghem J.L. Structure and origin of Xanthomonas arboricola pv. pruni populations causing bacterial spot of stone fruit trees in Western Europe. Phytopathology 2005, 95:1081-1088.
-
(2005)
Phytopathology
, vol.95
, pp. 1081-1088
-
-
Boudon, S.1
Manceau, C.2
Notteghem, J.L.3
-
4
-
-
0028086665
-
Physiological, chemical, serological, and pathogenic analyses of a worldwide collection of Xanthomonas campestris pv. vesicatoria strains
-
Bouzar H., Jones J.B., Stall R.E., Hodge N.C., Minsavage G.V., Benedict A.A., Alvarez A.M. Physiological, chemical, serological, and pathogenic analyses of a worldwide collection of Xanthomonas campestris pv. vesicatoria strains. Phytopathology 1994, 84:663-671.
-
(1994)
Phytopathology
, vol.84
, pp. 663-671
-
-
Bouzar, H.1
Jones, J.B.2
Stall, R.E.3
Hodge, N.C.4
Minsavage, G.V.5
Benedict, A.A.6
Alvarez, A.M.7
-
5
-
-
77949375230
-
Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv. bilvae
-
Bui Thi Ngoc L., Vernière C., Jouen E., Ah-You N., Lefeuvre P., Chiroleu F., Gagnevin L., Pruvost O. Amplified fragment length polymorphism and multilocus sequence analysis-based genotypic relatedness among pathogenic variants of Xanthomonas citri pv. citri and Xanthomonas campestris pv. bilvae. Int. J. Syst. Evol. Microbiol. 2010, 60:515-525.
-
(2010)
Int. J. Syst. Evol. Microbiol.
, vol.60
, pp. 515-525
-
-
Bui Thi Ngoc, L.1
Vernière, C.2
Jouen, E.3
Ah-You, N.4
Lefeuvre, P.5
Chiroleu, F.6
Gagnevin, L.7
Pruvost, O.8
-
6
-
-
79955133206
-
Comprehensive list of names of plant pathogenic bacteria, 1980-2007
-
Bull C.T., De Boer S.H., Denny T.P., Firrao G., Fischer-Le Saux M., Saddler G.S., Scortichini M., Stead D.E., Takikawa Y. Comprehensive list of names of plant pathogenic bacteria, 1980-2007. J. Plant Pathol. 2010, 92:551-592.
-
(2010)
J. Plant Pathol.
, vol.92
, pp. 551-592
-
-
Bull, C.T.1
De Boer, S.H.2
Denny, T.P.3
Firrao, G.4
Fischer-Le Saux, M.5
Saddler, G.S.6
Scortichini, M.7
Stead, D.E.8
Takikawa, Y.9
-
7
-
-
33749554389
-
The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process
-
Comas I., Moya A., Azad R.K., Lawrence J.G., Gonzalez-Candelas F. The evolutionary origin of Xanthomonadales genomes and the nature of the horizontal gene transfer process. Mol. Biol. Evol. 2006, 23:2049-2057.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 2049-2057
-
-
Comas, I.1
Moya, A.2
Azad, R.K.3
Lawrence, J.G.4
Gonzalez-Candelas, F.5
-
8
-
-
0000296003
-
International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains
-
Dye D.W., Bradbury J.F., Goto M., Hayward A.C., Lelliott R.A., Schroth M.N. International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains. Rev. Plant Pathol. 1980, 59:153-168.
-
(1980)
Rev. Plant Pathol.
, vol.59
, pp. 153-168
-
-
Dye, D.W.1
Bradbury, J.F.2
Goto, M.3
Hayward, A.C.4
Lelliott, R.A.5
Schroth, M.N.6
-
9
-
-
34548598619
-
Pathogenicity assays restrict the species Xanthomonas campestris into three pathovars and reveal nine races within X. campestris pv. campestris
-
Fargier E., Manceau C. Pathogenicity assays restrict the species Xanthomonas campestris into three pathovars and reveal nine races within X. campestris pv. campestris. Plant Pathol. 2007, 56:805-818.
-
(2007)
Plant Pathol.
, vol.56
, pp. 805-818
-
-
Fargier, E.1
Manceau, C.2
-
10
-
-
0000194822
-
Concerning the NJ algorithm and its unweighted version UNJ
-
American Mathematical Society, Providence, RI, USA, B. Mirkin, F.R. McMorris, F. Roberts, A. Rzhetsky (Eds.)
-
Gascuel O. Concerning the NJ algorithm and its unweighted version UNJ. Mathematical Hierarchies and Biology 1997, 149-171. American Mathematical Society, Providence, RI, USA. B. Mirkin, F.R. McMorris, F. Roberts, A. Rzhetsky (Eds.).
-
(1997)
Mathematical Hierarchies and Biology
, pp. 149-171
-
-
Gascuel, O.1
-
11
-
-
23944437942
-
Re-evaluating prokaryotic species
-
Gevers D., Cohan F.M., Lawrence J.G., Spratt B.G., Coenye T., Feil E.J., Stackebrandt E., Van de Peer Y., Vandamme P., Thompson F.L., Swings J. Re-evaluating prokaryotic species. Nat. Rev. Microbiol. 2005, 3:733-739.
-
(2005)
Nat. Rev. Microbiol.
, vol.3
, pp. 733-739
-
-
Gevers, D.1
Cohan, F.M.2
Lawrence, J.G.3
Spratt, B.G.4
Coenye, T.5
Feil, E.J.6
Stackebrandt, E.7
Van de Peer, Y.8
Vandamme, P.9
Thompson, F.L.10
Swings, J.11
-
12
-
-
33750398103
-
Bio3d: an R package for the comparative analysis of protein structures
-
Grant B.J., Rodrigues A.P.C., El Sawy K.M., McCammon J.A., Caves L.S.D. Bio3d: an R package for the comparative analysis of protein structures. Bioinformatics 2006, 22:2695-2696.
-
(2006)
Bioinformatics
, vol.22
, pp. 2695-2696
-
-
Grant, B.J.1
Rodrigues, A.P.C.2
El Sawy, K.M.3
McCammon, J.A.4
Caves, L.S.D.5
-
13
-
-
0242578620
-
A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood
-
Guindon S., Gascuel O. A simple, fast, and accurate algorithm to estimate large phylogenies by maximum likelihood. Syst. Biol. 2003, 52:696-704.
-
(2003)
Syst. Biol.
, vol.52
, pp. 696-704
-
-
Guindon, S.1
Gascuel, O.2
-
14
-
-
77957989122
-
A new type of strain of Xanthomonas euvesicatoria causing bacterial spot of tomato and pepper in Grenada
-
Hamza A.A., Robène-Soustrade I., Boyer C., Laurent A., Jouen E., Wicker E., Prior P., Pruvost O., Dottin M. A new type of strain of Xanthomonas euvesicatoria causing bacterial spot of tomato and pepper in Grenada. Plant Dis. 2010, 94:1264.
-
(2010)
Plant Dis.
, vol.94
, pp. 1264
-
-
Hamza, A.A.1
Robène-Soustrade, I.2
Boyer, C.3
Laurent, A.4
Jouen, E.5
Wicker, E.6
Prior, P.7
Pruvost, O.8
Dottin, M.9
-
15
-
-
77955608568
-
Genetic and pathological diversity among Xanthomonas strains responsible for bacterial spot on tomato and pepper in the Southwest Indian ocean region
-
Hamza A.A., Robène-Soustrade I., Jouen E., Gagnevin L., Lefeuvre P., Chiroleu F., Pruvost O. Genetic and pathological diversity among Xanthomonas strains responsible for bacterial spot on tomato and pepper in the Southwest Indian ocean region. Plant Dis. 2010, 94:993-999.
-
(2010)
Plant Dis.
, vol.94
, pp. 993-999
-
-
Hamza, A.A.1
Robène-Soustrade, I.2
Jouen, E.3
Gagnevin, L.4
Lefeuvre, P.5
Chiroleu, F.6
Pruvost, O.7
-
16
-
-
0030898948
-
Comparison of 16S ribosomal DNA sequences of all Xanthomonas species
-
Hauben L., Vauterin L., Swings J., Moore E.R.B. Comparison of 16S ribosomal DNA sequences of all Xanthomonas species. Int. J. Syst. Bacteriol. 1997, 47:328-335.
-
(1997)
Int. J. Syst. Bacteriol.
, vol.47
, pp. 328-335
-
-
Hauben, L.1
Vauterin, L.2
Swings, J.3
Moore, E.R.B.4
-
17
-
-
30744470609
-
Application of phylogenetic networks in evolutionary studies
-
Huson D.H., Bryant D. Application of phylogenetic networks in evolutionary studies. Mol. Biol. Evol. 2006, 23:254-267.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 254-267
-
-
Huson, D.H.1
Bryant, D.2
-
18
-
-
9944235794
-
Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper
-
Jones J.B., Lacy G.H., Bouzar H., Stall R.E., Schaad N.W. Reclassification of the xanthomonads associated with bacterial spot disease of tomato and pepper. Syst. Appl. Microbiol. 2004, 27:755-762.
-
(2004)
Syst. Appl. Microbiol.
, vol.27
, pp. 755-762
-
-
Jones, J.B.1
Lacy, G.H.2
Bouzar, H.3
Stall, R.E.4
Schaad, N.W.5
-
19
-
-
0019296687
-
A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences
-
Kimura M. A simple method for estimating evolutionary rates of base substitutions through comparative studies of nucleotide sequences. J. Mol. Evol. 1980, 16:111-120.
-
(1980)
J. Mol. Evol.
, vol.16
, pp. 111-120
-
-
Kimura, M.1
-
20
-
-
0030724365
-
Development of a diagnostic DNA probe for xanthomonads causing bacterial spot of peppers and tomatoes
-
Kuflu K.M., Cuppels D.A. Development of a diagnostic DNA probe for xanthomonads causing bacterial spot of peppers and tomatoes. Appl. Environ. Microbiol. 1997, 63:4462-4470.
-
(1997)
Appl. Environ. Microbiol.
, vol.63
, pp. 4462-4470
-
-
Kuflu, K.M.1
Cuppels, D.A.2
-
21
-
-
0028836045
-
Differentiation of genomic structure by rep-PCR fingerprinting to rapidly classify Xanthomonas campestris pv. vesicatoria
-
Louws F.J., Fulbright D.W., Stephens C.T., Debruijn F.J. Differentiation of genomic structure by rep-PCR fingerprinting to rapidly classify Xanthomonas campestris pv. vesicatoria. Phytopathology 1995, 85:528-536.
-
(1995)
Phytopathology
, vol.85
, pp. 528-536
-
-
Louws, F.J.1
Fulbright, D.W.2
Stephens, C.T.3
Debruijn, F.J.4
-
22
-
-
77957243284
-
RDP3: a flexible and fast computer program for analyzing recombination
-
Martin D.P., Lemey P., Lott M., Moulton V., Posada D., Lefeuvre P. RDP3: a flexible and fast computer program for analyzing recombination. Bioinformatics 2010, 26:2462-2463.
-
(2010)
Bioinformatics
, vol.26
, pp. 2462-2463
-
-
Martin, D.P.1
Lemey, P.2
Lott, M.3
Moulton, V.4
Posada, D.5
Lefeuvre, P.6
-
23
-
-
0036201363
-
A mathematical method for determining genome divergence and species delineation using AFLP
-
Mougel C., Thioulouse J., Perrière G., Nesme X. A mathematical method for determining genome divergence and species delineation using AFLP. Int. J. Syst. Evol. Microbiol. 2002, 52:573-586.
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 573-586
-
-
Mougel, C.1
Thioulouse, J.2
Perrière, G.3
Nesme, X.4
-
24
-
-
0022507362
-
Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions
-
Nei M., Gojobori T. Simple methods for estimating the numbers of synonymous and nonsynonymous nucleotide substitutions. Mol. Biol. Evol. 1986, 3:418-426.
-
(1986)
Mol. Biol. Evol.
, vol.3
, pp. 418-426
-
-
Nei, M.1
Gojobori, T.2
-
25
-
-
1042304216
-
APE: analyses of phylogenetics and evolution in R language
-
Paradis E., Claude J., Strimmer K. APE: analyses of phylogenetics and evolution in R language. Bioinformatics 2004, 20:289-290.
-
(2004)
Bioinformatics
, vol.20
, pp. 289-290
-
-
Paradis, E.1
Claude, J.2
Strimmer, K.3
-
26
-
-
34047205234
-
-
Springer, New York, NY, USA.
-
Paradis E. Book Analysis of Phylogenetics and Evolution with R 2006, Springer, New York, NY, USA, p. 211.
-
(2006)
Book Analysis of Phylogenetics and Evolution with R
, pp. 211
-
-
Paradis, E.1
-
27
-
-
37449010217
-
Phylogenetic analysis of Xanthomonas species by comparison of partial gyrase B gene sequences
-
Parkinson N., Aritua V., Heeney J., Cowie C., Bew J., Stead D. Phylogenetic analysis of Xanthomonas species by comparison of partial gyrase B gene sequences. Int. J. Syst. Evol. Microbiol. 2007, 57:2881-2887.
-
(2007)
Int. J. Syst. Evol. Microbiol.
, vol.57
, pp. 2881-2887
-
-
Parkinson, N.1
Aritua, V.2
Heeney, J.3
Cowie, C.4
Bew, J.5
Stead, D.6
-
28
-
-
63449114590
-
Phylogenetic structure of Xanthomonas determined by comparison of gyrB sequences
-
Parkinson N., Cowie C., Heeney J., Stead D. Phylogenetic structure of Xanthomonas determined by comparison of gyrB sequences. Int. J. Syst. Evol. Microbiol. 2009, 59:264-274.
-
(2009)
Int. J. Syst. Evol. Microbiol.
, vol.59
, pp. 264-274
-
-
Parkinson, N.1
Cowie, C.2
Heeney, J.3
Stead, D.4
-
29
-
-
33751019669
-
Identification of genomic species in Agrobacterium biovar 1 by AFLP genomic markers
-
Portier P., Fischer-Le Saux M., Mougel C., Lerondelle C., Chapulliot D., Thioulouse J., Nesme X. Identification of genomic species in Agrobacterium biovar 1 by AFLP genomic markers. Appl. Environ. Microbiol. 2006, 72:7123-7131.
-
(2006)
Appl. Environ. Microbiol.
, vol.72
, pp. 7123-7131
-
-
Portier, P.1
Fischer-Le Saux, M.2
Mougel, C.3
Lerondelle, C.4
Chapulliot, D.5
Thioulouse, J.6
Nesme, X.7
-
30
-
-
70350166501
-
Occurrence of Xanthomonas campestris pv. raphani on tomato plants in the Russian federation
-
Punina N.V., Ignatov A.N., Pekhtereva E.S., Kornev K.P., Matveeva E.V., Polityko N.I., Schaad N.W. Occurrence of Xanthomonas campestris pv. raphani on tomato plants in the Russian federation. Acta Hortic. 2009, 808:287-290.
-
(2009)
Acta Hortic.
, vol.808
, pp. 287-290
-
-
Punina, N.V.1
Ignatov, A.N.2
Pekhtereva, E.S.3
Kornev, K.P.4
Matveeva, E.V.5
Polityko, N.I.6
Schaad, N.W.7
-
31
-
-
0034068106
-
Comparison of AFLP and rep-PCR genomic fingerprinting with DNA-DNA homology studies: Xanthomonas as a model system
-
Rademaker J.L.W., Hoste B., Louws F.J., Kersters K., Swings J., Vauterin L., Vauterin P., De Bruijn F.J. Comparison of AFLP and rep-PCR genomic fingerprinting with DNA-DNA homology studies: Xanthomonas as a model system. Int. J. Syst. Evol. Microbiol. 2000, 50:665-677.
-
(2000)
Int. J. Syst. Evol. Microbiol.
, vol.50
, pp. 665-677
-
-
Rademaker, J.L.W.1
Hoste, B.2
Louws, F.J.3
Kersters, K.4
Swings, J.5
Vauterin, L.6
Vauterin, P.7
De Bruijn, F.J.8
-
32
-
-
23944476569
-
A comprehensive species to strain taxonomic framework for Xanthomonas
-
Rademaker J.L.W., Louws F.J., Schultz M.H., Rossbach U., Vauterin L., Swings J., De Bruijn F.J. A comprehensive species to strain taxonomic framework for Xanthomonas. Phytopathology 2005, 95:1098-1111.
-
(2005)
Phytopathology
, vol.95
, pp. 1098-1111
-
-
Rademaker, J.L.W.1
Louws, F.J.2
Schultz, M.H.3
Rossbach, U.4
Vauterin, L.5
Swings, J.6
De Bruijn, F.J.7
-
33
-
-
0008064708
-
L'échaudure des feuilles de canne à sucre provoquée par Xanthomonas albilineans (Ashby) Dowson. II - Diagnostic et spectre d'hotes de l'agent pathogene en Afrique tropicale
-
Rott P., Chatenet M., Granier M., Baudin P. L'échaudure des feuilles de canne à sucre provoquée par Xanthomonas albilineans (Ashby) Dowson. II - Diagnostic et spectre d'hotes de l'agent pathogene en Afrique tropicale. Agron. Trop. 1988, 43:244-251.
-
(1988)
Agron. Trop.
, vol.43
, pp. 244-251
-
-
Rott, P.1
Chatenet, M.2
Granier, M.3
Baudin, P.4
-
34
-
-
0347513220
-
DnaSP, DNA polymorphism analyses by the coalescent and other methods
-
Rozas J., Sanchez-Del Barrio J.C., Messeguer X., Rozas R. DnaSP, DNA polymorphism analyses by the coalescent and other methods. Bioinformatics 2003, 19:2496-2497.
-
(2003)
Bioinformatics
, vol.19
, pp. 2496-2497
-
-
Rozas, J.1
Sanchez-Del Barrio, J.C.2
Messeguer, X.3
Rozas, R.4
-
35
-
-
0023375195
-
The neighbor-joining method: a new method for reconstructing phylogenetic trees
-
Saitou N., Nei M. The neighbor-joining method: a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 1987, 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
36
-
-
21944436664
-
Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov., and X. alfalfae subsp. citrumelo (ex Riker and Jones) Gabriel et al., 1989 sp. nov. nom. rev. comb. nov.; X. campestris pv. malvacearum (ex Smith 1901)
-
Schaad N.W., Postnikova E., Lacy G.H., Sechler A., Agarkova I., Stromberg P.E., Stromberg V.K., Vidaver A.K. Reclassification of Xanthomonas campestris pv. citri (ex Hasse 1915) Dye 1978 forms A, B/C/D, and E as X. smithii subsp. citri (ex Hasse) sp. nov. nom. rev. comb. nov., X. fuscans subsp. aurantifolii (ex Gabriel 1989) sp. nov. nom. rev. comb. nov., and X. alfalfae subsp. citrumelo (ex Riker and Jones) Gabriel et al., 1989 sp. nov. nom. rev. comb. nov.; X. campestris pv. malvacearum (ex Smith 1901) Dye 1978 as X. smithii subsp. smithii nov. comb. nov. nom. nov.; X. campestris pv. alfalfae (ex Riker and Jones, 1935) Dye 1978 as X. alfalfae subsp. alfalfae (ex Riker et al., 1935) sp. nov. nom. rev.; and "var. fuscans" of X. campestris pv. phaseoli (ex Smith, 1987) Dye 1978 as X. fuscans subsp. fuscans sp. nov. Syst. Appl. Microbiol. 2005, 28:494-518.
-
(2005)
Syst. Appl. Microbiol.
, vol.28
, pp. 494-518
-
-
Schaad, N.W.1
Postnikova, E.2
Lacy, G.H.3
Sechler, A.4
Agarkova, I.5
Stromberg, P.E.6
Stromberg, V.K.7
Vidaver, A.K.8
-
37
-
-
0032766857
-
Multiple comparisons of log-likelihoods with applications to phylogenetic inference
-
Shimodaira M., Hasegawa M. Multiple comparisons of log-likelihoods with applications to phylogenetic inference. Mol. Biol. Evol. 1999, 16:1114-1116.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1114-1116
-
-
Shimodaira, M.1
Hasegawa, M.2
-
38
-
-
0035989633
-
Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology
-
Stackebrandt E., Frederiksen W., Garrity G.M., Grimont P.A.D., Kampfer P., Maiden M.C.J., Nesme X., Rossello-Mora R., Swings J., Truper H.G., Vauterin L., Ward A.C., Whitman W.B. Report of the ad hoc committee for the re-evaluation of the species definition in bacteriology. Int. J. Syst. Evol. Microbiol. 2002, 52:1043-1047.
-
(2002)
Int. J. Syst. Evol. Microbiol.
, vol.52
, pp. 1043-1047
-
-
Stackebrandt, E.1
Frederiksen, W.2
Garrity, G.M.3
Grimont, P.A.D.4
Kampfer, P.5
Maiden, M.C.J.6
Nesme, X.7
Rossello-Mora, R.8
Swings, J.9
Truper, H.G.10
Vauterin, L.11
Ward, A.C.12
Whitman, W.B.13
-
39
-
-
25144467187
-
Nucleotide substitution models
-
Cambridge University Press, Cambridge, M. Salemi, A.M. Vandamme (Eds.)
-
Strimmer K., Von Haeseler A. Nucleotide substitution models. The Phylogenetic Handbook 2003, 72-100. Cambridge University Press, Cambridge. M. Salemi, A.M. Vandamme (Eds.).
-
(2003)
The Phylogenetic Handbook
, pp. 72-100
-
-
Strimmer, K.1
Von Haeseler, A.2
-
40
-
-
33646584164
-
Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria
-
Susko E., Leigh J., Doolittle W.F., Bapteste E. Visualizing and assessing phylogenetic congruence of core gene sets: a case study of the gamma-proteobacteria. Mol. Biol. Evol. 2006, 23:1019-1030.
-
(2006)
Mol. Biol. Evol.
, vol.23
, pp. 1019-1030
-
-
Susko, E.1
Leigh, J.2
Doolittle, W.F.3
Bapteste, E.4
-
41
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
Tajima F. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 1989, 123:585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
Tajima, F.1
-
42
-
-
34547781750
-
MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
-
Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
-
(2007)
Mol. Biol. Evol.
, vol.24
, pp. 1596-1599
-
-
Tamura, K.1
Dudley, J.2
Nei, M.3
Kumar, S.4
-
43
-
-
27144440067
-
Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence
-
Thieme F., Koebnik R., Bekel T., Berger C., Boch J., Buttner D., Caldana C., Gaigalat L., Goesmann A., Kay S., Kirchner O., Lanz C., Linke B., McHardy A.C., Meyer F., Mittenhuber G., Nies D.H., Niesbach-Klosgen U., Patschkowski T., Ruckert C., Rupp O., Schneiker S., Schuster S.C., Vorholter F.J., Weber E., Puhler A., Bonas U., Bartels D., Kaiser O. Insights into genome plasticity and pathogenicity of the plant pathogenic bacterium Xanthomonas campestris pv. vesicatoria revealed by the complete genome sequence. J. Bacteriol. 2005, 187:7254-7266.
-
(2005)
J. Bacteriol.
, vol.187
, pp. 7254-7266
-
-
Thieme, F.1
Koebnik, R.2
Bekel, T.3
Berger, C.4
Boch, J.5
Buttner, D.6
Caldana, C.7
Gaigalat, L.8
Goesmann, A.9
Kay, S.10
Kirchner, O.11
Lanz, C.12
Linke, B.13
McHardy, A.C.14
Meyer, F.15
Mittenhuber, G.16
Nies, D.H.17
Niesbach-Klosgen, U.18
Patschkowski, T.19
Ruckert, C.20
Rupp, O.21
Schneiker, S.22
Schuster, S.C.23
Vorholter, F.J.24
Weber, E.25
Puhler, A.26
Bonas, U.27
Bartels, D.28
Kaiser, O.29
more..
-
44
-
-
0031574072
-
The clustal×windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools
-
Thompson J.D., Gibson T.J., Plewniak F., Jeanmougin F., Higgins D.G. The clustal×windows interface: flexible strategies for multiple sequence alignment aided by quality analysis tools. Nucleic Acids Res. 1997, 25:4876-4882.
-
(1997)
Nucleic Acids Res.
, vol.25
, pp. 4876-4882
-
-
Thompson, J.D.1
Gibson, T.J.2
Plewniak, F.3
Jeanmougin, F.4
Higgins, D.G.5
-
45
-
-
0029038306
-
Reclassification of Xanthomonas
-
Vauterin L., Hoste B., Kersters K., Swings J. Reclassification of Xanthomonas. Int. J. Syst. Bacteriol. 1995, 45:472-489.
-
(1995)
Int. J. Syst. Bacteriol.
, vol.45
, pp. 472-489
-
-
Vauterin, L.1
Hoste, B.2
Kersters, K.3
Swings, J.4
-
46
-
-
0034848170
-
DAMBE: software package for data analysis in molecular biology and evolution
-
Xia X., Xie Z. DAMBE: software package for data analysis in molecular biology and evolution. J. Hered. 2001, 92:371-373.
-
(2001)
J. Hered.
, vol.92
, pp. 371-373
-
-
Xia, X.1
Xie, Z.2
-
47
-
-
54849378000
-
A multilocus sequence analysis of the genus Xanthomonas
-
Young J.M., Park D.C., Shearman H.M., Fargier E. A multilocus sequence analysis of the genus Xanthomonas. Syst. Appl. Microbiol. 2008, 31:366-377.
-
(2008)
Syst. Appl. Microbiol.
, vol.31
, pp. 366-377
-
-
Young, J.M.1
Park, D.C.2
Shearman, H.M.3
Fargier, E.4
|