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Volumn 11, Issue 7, 2011, Pages 1738-1751

Reconstructing host range evolution of bacterial plant pathogens using Pseudomonas syringae pv. tomato and its close relatives as a model

Author keywords

Ancestral state reconstruction; Bacterial plant pathogens; Host range evolution

Indexed keywords

GENOMIC DNA;

EID: 81155162492     PISSN: 15671348     EISSN: 15677257     Source Type: Journal    
DOI: 10.1016/j.meegid.2011.07.012     Document Type: Article
Times cited : (21)

References (51)
  • 1
    • 53849111617 scopus 로고    scopus 로고
    • Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens
    • Achtman M. Evolution, population structure, and phylogeography of genetically monomorphic bacterial pathogens. Annu. Rev. Microbiol. 2008, 62:53-70.
    • (2008) Annu. Rev. Microbiol. , vol.62 , pp. 53-70
    • Achtman, M.1
  • 5
    • 34547617172 scopus 로고    scopus 로고
    • Recombination rate estimation in the presence of hotspots
    • Auton A., McVean G. Recombination rate estimation in the presence of hotspots. Genome Res. 2007, 17:1219-1227.
    • (2007) Genome Res. , vol.17 , pp. 1219-1227
    • Auton, A.1    McVean, G.2
  • 6
    • 75649108199 scopus 로고    scopus 로고
    • The Tangled Roots of Agriculture
    • Balter M. The Tangled Roots of Agriculture. Science 2010, 327:404-406.
    • (2010) Science , vol.327 , pp. 404-406
    • Balter, M.1
  • 7
    • 79960028477 scopus 로고    scopus 로고
    • Multilocus sequence typing of Pseudomonas syringae sensu lato confirms previously described genomosoecies and permits rapid idenitfication of P. syringae pv. coriandricola and P. syringae pv. apii causing bacterial leaf spot on parsley
    • Bull C.T., Clarke C.R., Cai R., Vinatzer B.A., Jardini T.M., Koike S.T. Multilocus sequence typing of Pseudomonas syringae sensu lato confirms previously described genomosoecies and permits rapid idenitfication of P. syringae pv. coriandricola and P. syringae pv. apii causing bacterial leaf spot on parsley. Phytopathology 2011.
    • (2011) Phytopathology
    • Bull, C.T.1    Clarke, C.R.2    Cai, R.3    Vinatzer, B.A.4    Jardini, T.M.5    Koike, S.T.6
  • 9
    • 32944479048 scopus 로고    scopus 로고
    • Host-microbe interactions: shaping the evolution of the plant immune response
    • Chisholm S.T., Coaker G., Day B., Staskawicz B.J. Host-microbe interactions: shaping the evolution of the plant immune response. Cell 2006, 124:803-814.
    • (2006) Cell , vol.124 , pp. 803-814
    • Chisholm, S.T.1    Coaker, G.2    Day, B.3    Staskawicz, B.J.4
  • 10
    • 0022595516 scopus 로고
    • Generation and characterization of Tn5 insertion mutations in Pseudomonas syringae pv.
    • Cuppels D.A. Generation and characterization of Tn5 insertion mutations in Pseudomonas syringae pv. Tomato. Appl. Environ. Microbiol. 1986, 51:323-327.
    • (1986) Tomato. Appl. Environ. Microbiol. , vol.51 , pp. 323-327
    • Cuppels, D.A.1
  • 11
    • 0028892110 scopus 로고
    • Molecular and physiological characterization of Pseudomonas syringae pv. tomato and Pseudomonas syringae pv. maculicola Strains That Produce the Phytotoxin Coronatine
    • Cuppels D.A., Ainsworth T. Molecular and physiological characterization of Pseudomonas syringae pv. tomato and Pseudomonas syringae pv. maculicola Strains That Produce the Phytotoxin Coronatine. Appl. Environ. Microbiol. 1995, 61:3530-3536.
    • (1995) Appl. Environ. Microbiol. , vol.61 , pp. 3530-3536
    • Cuppels, D.A.1    Ainsworth, T.2
  • 12
    • 0000973939 scopus 로고
    • Identification and molecular mapping of a single Arabidopsis thaliana locus determining resistance to a phytopathogenic Pseudomonas syringae isolate
    • Debener T., Lehnackers H., Arnold M., Dangl J.L. Identification and molecular mapping of a single Arabidopsis thaliana locus determining resistance to a phytopathogenic Pseudomonas syringae isolate. Plant J. 1991, 1:289-302.
    • (1991) Plant J. , vol.1 , pp. 289-302
    • Debener, T.1    Lehnackers, H.2    Arnold, M.3    Dangl, J.L.4
  • 13
    • 0008103884 scopus 로고
    • Differentiation of Pseudomonas syringae pv. tomato from P. syringae with a DNA hybridization probe
    • Denny T.P. Differentiation of Pseudomonas syringae pv. tomato from P. syringae with a DNA hybridization probe. Phytopathology 1988, 78:1186-1193.
    • (1988) Phytopathology , vol.78 , pp. 1186-1193
    • Denny, T.P.1
  • 14
    • 0023734087 scopus 로고
    • Genetic diversity and relationships of two pathovars of Pseudomonas syringae
    • Denny T.P. Genetic diversity and relationships of two pathovars of Pseudomonas syringae. J. Gen. Microbiol 1988, 134:1949-1960.
    • (1988) J. Gen. Microbiol , vol.134 , pp. 1949-1960
    • Denny, T.P.1
  • 16
    • 0000296003 scopus 로고
    • International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains
    • Dye D.W., Bradbury J.F., Goto M., Hayward A.C., Lelliott R.A., Schroth M.N. International standards for naming pathovars of phytopathogenic bacteria and a list of pathovar names and pathotype strains. Rev. Plant Pathol. 1980, 142:153-158.
    • (1980) Rev. Plant Pathol. , vol.142 , pp. 153-158
    • Dye, D.W.1    Bradbury, J.F.2    Goto, M.3    Hayward, A.C.4    Lelliott, R.A.5    Schroth, M.N.6
  • 17
    • 0032900419 scopus 로고    scopus 로고
    • DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959)
    • Gardan L., Shafik H., Belouin S., Broch R., Grimont F., Grimont P.A. DNA relatedness among the pathovars of Pseudomonas syringae and description of Pseudomonas tremae sp. nov. and Pseudomonas cannabina sp. nov. (ex Sutic and Dowson 1959). Int. J. Syst. Bacteriol. 1999, 49 Pt 2:469-478.
    • (1999) Int. J. Syst. Bacteriol. , pp. 469-478
    • Gardan, L.1    Shafik, H.2    Belouin, S.3    Broch, R.4    Grimont, F.5    Grimont, P.A.6
  • 18
    • 0030901705 scopus 로고    scopus 로고
    • Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution
    • Hacker J., Blum-Oehler G., Muhldorfer I., Tschape H. Pathogenicity islands of virulent bacteria: structure, function and impact on microbial evolution. Mol. Microbiol. 1997, 23:1089-1097.
    • (1997) Mol. Microbiol. , vol.23 , pp. 1089-1097
    • Hacker, J.1    Blum-Oehler, G.2    Muhldorfer, I.3    Tschape, H.4
  • 19
    • 0033827553 scopus 로고    scopus 로고
    • Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae-a pathogen, ice nucleus, and epiphyte
    • Hirano S.S., Upper C.D. Bacteria in the leaf ecosystem with emphasis on Pseudomonas syringae-a pathogen, ice nucleus, and epiphyte. Microbiol. Mol. Biol. Rev. 2000, 64:624-653.
    • (2000) Microbiol. Mol. Biol. Rev. , vol.64 , pp. 624-653
    • Hirano, S.S.1    Upper, C.D.2
  • 20
    • 0031678692 scopus 로고    scopus 로고
    • SplitsTree: analyzing and visualizing evolutionary data
    • Huson D.H. SplitsTree: analyzing and visualizing evolutionary data. Bioinformatics 1998, 14:68-73.
    • (1998) Bioinformatics , vol.14 , pp. 68-73
    • Huson, D.H.1
  • 21
    • 25144466838 scopus 로고    scopus 로고
    • Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae
    • Hwang M.S., Morgan R.L., Sarkar S.F., Wang P.W., Guttman D.S. Phylogenetic characterization of virulence and resistance phenotypes of Pseudomonas syringae. Appl. Environ. Microbiol. 2005, 71:5182-5191.
    • (2005) Appl. Environ. Microbiol. , vol.71 , pp. 5182-5191
    • Hwang, M.S.1    Morgan, R.L.2    Sarkar, S.F.3    Wang, P.W.4    Guttman, D.S.5
  • 22
    • 0030803875 scopus 로고    scopus 로고
    • Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana
    • Innan H., Terauchi R., Miyashita N.T. Microsatellite polymorphism in natural populations of the wild plant Arabidopsis thaliana. Genetics 1997, 146:1441-1452.
    • (1997) Genetics , vol.146 , pp. 1441-1452
    • Innan, H.1    Terauchi, R.2    Miyashita, N.T.3
  • 24
    • 77949283685 scopus 로고    scopus 로고
    • Molecular and evolutionary analyses of Pseudomonas syringae pv. tomato race 1
    • Kunkeaw S., Tan S., Coaker G. Molecular and evolutionary analyses of Pseudomonas syringae pv. tomato race 1. Mol. Plant Microbe Interact. 2010, 23:415-424.
    • (2010) Mol. Plant Microbe Interact. , vol.23 , pp. 415-424
    • Kunkeaw, S.1    Tan, S.2    Coaker, G.3
  • 25
    • 46449109082 scopus 로고    scopus 로고
    • Roadmap to new virulence determinants in Pseudomonas syringae: insights from comparative genomics and genome organization
    • Lindeberg M., Myers C.R., Collmer A., Schneider D.J. Roadmap to new virulence determinants in Pseudomonas syringae: insights from comparative genomics and genome organization. Mol. Plant Microbe Interact. 2008, 21:685-700.
    • (2008) Mol. Plant Microbe Interact. , vol.21 , pp. 685-700
    • Lindeberg, M.1    Myers, C.R.2    Collmer, A.3    Schneider, D.J.4
  • 26
    • 70350223944 scopus 로고    scopus 로고
    • The evolution of Pseudomonas syringae host specificity and type III effector repertoires
    • Lindeberg M., Cunnac S., Collmer A. The evolution of Pseudomonas syringae host specificity and type III effector repertoires. Mol. Plant Pathol. 2009, 10:767-775.
    • (2009) Mol. Plant Pathol. , vol.10 , pp. 767-775
    • Lindeberg, M.1    Cunnac, S.2    Collmer, A.3
  • 27
    • 0030803040 scopus 로고    scopus 로고
    • Bacterial leaf spot of celery in California: etiology, epidemiology, and role of contaminated seed
    • Little E.L., Koike S.T., Gilbertson R.L. Bacterial leaf spot of celery in California: etiology, epidemiology, and role of contaminated seed. Plant Dis. 1997, 81:892-896.
    • (1997) Plant Dis. , vol.81 , pp. 892-896
    • Little, E.L.1    Koike, S.T.2    Gilbertson, R.L.3
  • 29
    • 81155161586 scopus 로고    scopus 로고
    • Multilocus sequence typing of bacteria
    • Maiden M.C. Multilocus sequence typing of bacteria. Annu. Rev. Microbiol. 2006, 72:7098-7110.
    • (2006) Annu. Rev. Microbiol. , vol.72 , pp. 7098-7110
    • Maiden, M.C.1
  • 31
    • 0036199914 scopus 로고    scopus 로고
    • A coalescent-based method for detecting and estimating recombination from gene sequences
    • McVean G., Awadalla P., Fearnhead P. A coalescent-based method for detecting and estimating recombination from gene sequences. Genetics 2002, 160:1231-1241.
    • (2002) Genetics , vol.160 , pp. 1231-1241
    • McVean, G.1    Awadalla, P.2    Fearnhead, P.3
  • 32
    • 79551680560 scopus 로고    scopus 로고
    • Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand
    • Morris C.E., Sands D.C., Vanneste J.L., Montarry J., Oakley B., Guilbaud C., Glaux C. Inferring the evolutionary history of the plant pathogen Pseudomonas syringae from its biogeography in headwaters of rivers in North America, Europe, and New Zealand. Ambio 2010, 1.
    • (2010) Ambio , vol.1
    • Morris, C.E.1    Sands, D.C.2    Vanneste, J.L.3    Montarry, J.4    Oakley, B.5    Guilbaud, C.6    Glaux, C.7
  • 33
    • 0022448649 scopus 로고
    • Genetic diversity and relationships in populations of Bordetella spp.
    • Musser J.M., Hewlett E.L., Peppler M.S., Selander R.K. Genetic diversity and relationships in populations of Bordetella spp. J. Bacteriol. 1986, 166:230-237.
    • (1986) J. Bacteriol. , vol.166 , pp. 230-237
    • Musser, J.M.1    Hewlett, E.L.2    Peppler, M.S.3    Selander, R.K.4
  • 34
    • 9744245452 scopus 로고    scopus 로고
    • Bayesian estimation of ancestral character states on phylogenies
    • Pagel M., Meade A., Barker D. Bayesian estimation of ancestral character states on phylogenies. Syst. Biol. 2004, 53:673-684.
    • (2004) Syst. Biol. , vol.53 , pp. 673-684
    • Pagel, M.1    Meade, A.2    Barker, D.3
  • 35
    • 42649136257 scopus 로고    scopus 로고
    • Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty
    • Parker J., Rambaut A., Pybus O.G. Correlating viral phenotypes with phylogeny: accounting for phylogenetic uncertainty. Infect. Genet. Evol. 2008, 8:239-246.
    • (2008) Infect. Genet. Evol. , vol.8 , pp. 239-246
    • Parker, J.1    Rambaut, A.2    Pybus, O.G.3
  • 36
    • 0031773680 scopus 로고    scopus 로고
    • MODELTEST: testing the model of DNA substitution
    • Posada D., Crandall K.A. MODELTEST: testing the model of DNA substitution. Bioinformatics 1998, 14:817-818.
    • (1998) Bioinformatics , vol.14 , pp. 817-818
    • Posada, D.1    Crandall, K.A.2
  • 37
    • 0026602983 scopus 로고
    • The cloned avirulence gene avrPto induces disease resistance in tomato cultivars containing the Pto resistance gene
    • Ronald P.C., Salmeron J.M., Carland F.M., Staskawicz B.J. The cloned avirulence gene avrPto induces disease resistance in tomato cultivars containing the Pto resistance gene. J. Bacteriol. 1992, 174:1604-1611.
    • (1992) J. Bacteriol. , vol.174 , pp. 1604-1611
    • Ronald, P.C.1    Salmeron, J.M.2    Carland, F.M.3    Staskawicz, B.J.4
  • 38
    • 4344648036 scopus 로고    scopus 로고
    • Bayesian inference of character evolution
    • Ronquist F. Bayesian inference of character evolution. Trends Ecol. Evol. 2004, 19:475-481.
    • (2004) Trends Ecol. Evol. , vol.19 , pp. 475-481
    • Ronquist, F.1
  • 40
    • 1642319596 scopus 로고    scopus 로고
    • Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen
    • Sarkar S.F., Guttman D.S. Evolution of the core genome of Pseudomonas syringae, a highly clonal, endemic plant pathogen. Appl. Environ. Microbiol. 2004, 70:1999-2012.
    • (2004) Appl. Environ. Microbiol. , vol.70 , pp. 1999-2012
    • Sarkar, S.F.1    Guttman, D.S.2
  • 41
    • 33750471586 scopus 로고    scopus 로고
    • Comparative genomics of host-specific virulence in Pseudomonas syringae
    • Sarkar S.F., Gordon J.S., Martin G.B., Guttman D.S. Comparative genomics of host-specific virulence in Pseudomonas syringae. Genetics 2006, 174:1041-1056.
    • (2006) Genetics , vol.174 , pp. 1041-1056
    • Sarkar, S.F.1    Gordon, J.S.2    Martin, G.B.3    Guttman, D.S.4
  • 42
    • 44349091185 scopus 로고    scopus 로고
    • First report of bacterial speck of tomato caused by Pseudomonas syringae pv. tomato in Tanzania
    • Shenge K.C., Mabagala R.B., Mortensen C.N., Stephan D., Wydra K. First report of bacterial speck of tomato caused by Pseudomonas syringae pv. tomato in Tanzania. Plant Dis. Note 2007, 91:462.
    • (2007) Plant Dis. Note , vol.91 , pp. 462
    • Shenge, K.C.1    Mabagala, R.B.2    Mortensen, C.N.3    Stephan, D.4    Wydra, K.5
  • 43
    • 0032766857 scopus 로고    scopus 로고
    • Log-likelihoods with application to phylogenetic inference
    • Shimodaira H., Hasegawa M. Log-likelihoods with application to phylogenetic inference. Mol. Biol. Evol. 1999, 16:1114-1116.
    • (1999) Mol. Biol. Evol. , vol.16 , pp. 1114-1116
    • Shimodaira, H.1    Hasegawa, M.2
  • 45
    • 33646847604 scopus 로고    scopus 로고
    • Within-species flagellin polymorphism in Xanthomonas campestris pv. campestris and its impact on elicitation of Arabidopsis FLAGELLIN SENSING2-dependent defenses
    • Sun W., Dunning F.M., Pfund C., Weingarten R., Bent A.F. Within-species flagellin polymorphism in Xanthomonas campestris pv. campestris and its impact on elicitation of Arabidopsis FLAGELLIN SENSING2-dependent defenses. Plant Cell 2006, 18:764-779.
    • (2006) Plant Cell , vol.18 , pp. 764-779
    • Sun, W.1    Dunning, F.M.2    Pfund, C.3    Weingarten, R.4    Bent, A.F.5
  • 46
    • 0242575011 scopus 로고    scopus 로고
    • Flagellin glycosylation island in Pseudomonas syringae pv. Glycinea and its role in host specificity
    • Takeuchi K., Taguchi F., Inagaki Y., Toyoda K., Shiraishi T., Ichinose Y. Flagellin glycosylation island in Pseudomonas syringae pv. Glycinea and its role in host specificity. J. Bacteriol. 2003, 185:6658-6665.
    • (2003) J. Bacteriol. , vol.185 , pp. 6658-6665
    • Takeuchi, K.1    Taguchi, F.2    Inagaki, Y.3    Toyoda, K.4    Shiraishi, T.5    Ichinose, Y.6
  • 47
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol. Biol. Evol. 2007, 24:1596-1599.
    • (2007) Mol. Biol. Evol. , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 48
    • 0025717464 scopus 로고
    • Identification of Pseudomonas syringae pathogens of Arabidopsis and a bacterial locus determining avirulence on both Arabidopsis and soybean
    • Whalen M.C., Innes R.W., Bent A.F., Staskawicz B.J. Identification of Pseudomonas syringae pathogens of Arabidopsis and a bacterial locus determining avirulence on both Arabidopsis and soybean. Plant Cell 1991, 3:49-59.
    • (1991) Plant Cell , vol.3 , pp. 49-59
    • Whalen, M.C.1    Innes, R.W.2    Bent, A.F.3    Staskawicz, B.J.4
  • 49
    • 44249087418 scopus 로고    scopus 로고
    • Role of recombination in the evolution of the model plant pathogen Pseudomonas syringae pv. tomato DC3000, a very atypical tomato strain
    • Yan S., Liu H., Mohr T.J., Jenrette J., Chiodini R., Zaccardelli M., Setubal J.C., Vinatzer B.A. Role of recombination in the evolution of the model plant pathogen Pseudomonas syringae pv. tomato DC3000, a very atypical tomato strain. Appl. Environ. Microbiol. 2008, 74:3171-3181.
    • (2008) Appl. Environ. Microbiol. , vol.74 , pp. 3171-3181
    • Yan, S.1    Liu, H.2    Mohr, T.J.3    Jenrette, J.4    Chiodini, R.5    Zaccardelli, M.6    Setubal, J.C.7    Vinatzer, B.A.8
  • 50
    • 13844254539 scopus 로고    scopus 로고
    • Identification and in planta detection of Pseudomonas syringae pv. tomato using PCR amplification of hrpZ
    • Zaccardelli M., Spasiano A., Bazzi C.M.M. Identification and in planta detection of Pseudomonas syringae pv. tomato using PCR amplification of hrpZ. Eur. J. Plant Pathol. 2005, 111:85-90.
    • (2005) Eur. J. Plant Pathol. , vol.111 , pp. 85-90
    • Zaccardelli, M.1    Spasiano, A.2    Bazzi, C.M.M.3
  • 51
    • 0033850606 scopus 로고    scopus 로고
    • Bacterial leaf spot of leafy crucifers in Oklahoma caused by Pseudomonas syringae pv. Maculicola
    • Zhao Y., Damicone J.P., Demezas D.H., Rangaswamy V., Bender C.L. Bacterial leaf spot of leafy crucifers in Oklahoma caused by Pseudomonas syringae pv. Maculicola. Plant Dis. 2000, 84:1015-1020.
    • (2000) Plant Dis. , vol.84 , pp. 1015-1020
    • Zhao, Y.1    Damicone, J.P.2    Demezas, D.H.3    Rangaswamy, V.4    Bender, C.L.5


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