-
1
-
-
24644457076
-
Novel patterns of gene expression in polyploid plants
-
DOI 10.1016/j.tig.2005.07.009, PII S0168952505002179
-
Adams K, Wendel J (2005) Novel patterns of gene expression in polyploid plants. Trends Genet 21:539-543 (Pubitemid 41278456)
-
(2005)
Trends in Genetics
, vol.21
, Issue.10
, pp. 539-543
-
-
Adams, K.L.1
Wendel, J.F.2
-
2
-
-
0345071423
-
Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing
-
DOI 10.1073/pnas.0630618100
-
Adams KL, Cronn R, Percifield R, Wendel JF (2003) Genes duplicated by polyploidy show unequal contributions to the transcriptome and organ-specific reciprocal silencing. Proc Natl Acad Sci USA 100:4649-4654 (Pubitemid 36457784)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.8
, pp. 4649-4654
-
-
Adams, K.L.1
Cronn, R.2
Percifield, R.3
Wendel, J.F.4
-
3
-
-
11244349782
-
Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid
-
DOI 10.1534/genetics.104.033522
-
Adams KL, Percifield R, Wendel JF (2004) Organ-specific silencing of duplicated genes in a newly synthesized cotton allotetraploid. Genetics 168:2217-2226 (Pubitemid 40066356)
-
(2004)
Genetics
, vol.168
, Issue.4
, pp. 2217-2226
-
-
Adams, K.L.1
Percifield, R.2
Wendel, J.F.3
-
4
-
-
0034649566
-
Analysis of the genome sequence of the flowering plant Arabidopsis thaliana
-
AGI
-
AGI (2000) Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796-815
-
(2000)
Nature
, vol.408
, pp. 796-815
-
-
-
5
-
-
20044363321
-
Autopolyploidy in cabbage (Brassica oleracea L.) does not alter significantly the proteomes of green tissues
-
DOI 10.1002/pmic.200401092
-
Albertin W, Brabant P, Catrice O et al (2005) Autopolyploidy in cabbage (Brassica oleracea L.) does not alter significantly the proteomes of green tissues. Proteomics 5:2131-2139 (Pubitemid 40770577)
-
(2005)
Proteomics
, vol.5
, Issue.8
, pp. 2131-2139
-
-
Albertin, W.1
Brabant, P.2
Catrice, O.3
Eber, F.4
Jenczewski, E.5
Chevre, A.-M.6
Thiellement, H.7
-
6
-
-
77649268965
-
Posttranslational regulation impacts the fate of duplicated genes
-
Amoutzias GD, He Y, Gordon J, Mossialos D, Oliver SG, Van de Peer Y (2010) Posttranslational regulation impacts the fate of duplicated genes. Proc Natl Acad Sci USA 107:2967-2971
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 2967-2971
-
-
Amoutzias, G.D.1
He, Y.2
Gordon, J.3
Mossialos, D.4
Oliver, S.G.5
Van De Peer, Y.6
-
7
-
-
3843127604
-
Defects arising from whole-genome duplications in Saccharomyces cerevisiae
-
DOI 10.1534/genetics.104.029256
-
Andalis AA, Storchova Z, Styles C, Galitski T, Pellman D, Fink GR (2004) Defects arising from whole-genome duplications in Saccharomyces cerevisiae. Genetics 167:1109-1121 (Pubitemid 39045621)
-
(2004)
Genetics
, vol.167
, Issue.3
, pp. 1109-1121
-
-
Andalis, A.A.1
Storchova, Z.2
Styles, C.3
Galitski, T.4
Pellman, D.5
Fink, G.R.6
-
8
-
-
0037106617
-
Asy1, a protein required for meiotic chromosome synapsis, localizes to axis-associated chromatin in Arabidopsis and Brassica
-
Armstrong SJ, Caryl AP, Jones GH, Franklin FCH (2002) Asy1, a protein required for meiotic chromosome synapsis, localizes to axis-associated chromatin in Arabidopsis and Brassica. J Cell Sci 115:3645-3655
-
(2002)
J Cell Sci
, vol.115
, pp. 3645-3655
-
-
Armstrong, S.J.1
Caryl, A.P.2
Jones, G.H.3
Franklin, F.C.H.4
-
9
-
-
84859897319
-
Rarely successful polyploids and their legacy in plant genomes
-
Arrigo N, Barker MS (2012) Rarely successful polyploids and their legacy in plant genomes. Curr Opin Plant Biol 15:140-146
-
(2012)
Curr Opin Plant Biol
, vol.15
, pp. 140-146
-
-
Arrigo, N.1
Barker, M.S.2
-
10
-
-
33750858684
-
Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia
-
DOI 10.1038/nature05230, PII NATURE05230
-
Aury JM, Jaillon O, Duret L et al (2006) Global trends of whole-genome duplications revealed by the ciliate Paramecium tetraurelia. Nature 444:171-178 (Pubitemid 44722053)
-
(2006)
Nature
, vol.444
, Issue.7116
, pp. 171-178
-
-
Aury, J.-M.1
Jaillon, O.2
Duret, L.3
Noel, B.4
Jubin, C.5
Porcel, B.M.6
Segurens, B.7
Daubin, V.8
Anthouard, V.9
Aiach, N.10
Arnaiz, O.11
Billaut, A.12
Beisson, J.13
Blanc, I.14
Bouhouche, K.15
Cmara, F.16
Duharcourt, S.17
Guigo, R.18
Gogendeau, D.19
Katinka, M.20
Keller, A.-M.21
Kissmehl, R.22
Klotz, C.23
Koll, F.24
Le, M.A.25
Lepere, G.26
Malinsky, S.27
Nowacki, M.28
Nowak, J.K.29
Plattner, H.30
Poulain, J.31
Ruiz, F.32
Serrano, V.33
Zagulski, M.34
Dessen, P.35
Betermier, M.36
Weissenbach, J.37
Scarpelli, C.38
Schachter, V.39
Sperling, L.40
Meyer, E.41
Cohen, J.42
Wincker, P.43
more..
-
11
-
-
0017191942
-
The effect of genes controlling different degrees of homoeologous pairing on quadrivalent frequency in induced autotetraploid lines of Triticum longissimum
-
Avivi L (1976) The effect of genes controlling different degrees of homoeologous pairing on quadrivalent frequency in induced autotetraploid lines of Triticum longissimum. Can J Genet Cytol 18:357-364
-
(1976)
Can J Genet Cytol
, vol.18
, pp. 357-364
-
-
Avivi, L.1
-
12
-
-
66149141092
-
The allotetraploid Arabidopsis thaliana-Arabidopsis lyrata subsp. Petraea as an alternative model system for the study of polyploidy in plants
-
Beaulieu J, Jean M, Belzile F (2009) The allotetraploid Arabidopsis thaliana-Arabidopsis lyrata subsp. petraea as an alternative model system for the study of polyploidy in plants. Mol Genet Genomics 281:421-435
-
(2009)
Mol Genet Genomics
, vol.281
, pp. 421-435
-
-
Beaulieu, J.1
Jean, M.2
Belzile, F.3
-
13
-
-
33751019965
-
Further insights into the phylogeny of Arabidopsis (Brassicaceae) from nuclear Atmyb2 flanking sequence
-
DOI 10.1016/j.ympev.2006.06.011, PII S1055790306002417
-
Beck JB, Al-Shehbaz IA, O'Kane SL Jr, Schaal BA (2007) Further insights into the phylogeny of Arabidopsis (Brassicaceae) from nuclear Atmyb2 flanking sequence. Mol Phylogenet Evol 42:122-130 (Pubitemid 44750706)
-
(2007)
Molecular Phylogenetics and Evolution
, vol.42
, Issue.1
, pp. 122-130
-
-
Beck, J.B.1
Al-Shehbaz, I.A.2
O'Kane Jr., S.L.3
Schaal, B.A.4
-
14
-
-
84881174109
-
Retrotransposons represent the most labile fraction for genomic rearrangements in polyploid plant species
-
Bento M, Tomás D, Viegas W, Silva M (2013) Retrotransposons represent the most labile fraction for genomic rearrangements in polyploid plant species. Cytogenet Genome Res 140:286-294
-
(2013)
Cytogenet Genome Res
, vol.140
, pp. 286-294
-
-
Bento, M.1
Tomás, D.2
Viegas, W.3
Silva, M.4
-
15
-
-
0033179914
-
The DIF1 gene of Arabidopsis is required for meiotic chromosome segregation and belongs to the REC8/RAD21 cohesin gene family
-
Bhatt AM, Lister C, Page T, Fransz P, Findlay K et al (1999) The DIF1 gene of Arabidopsis is required for meiotic chromosome segregation and belongs to the REC8/RAD21 cohesin gene family. Plant J 19:463-472
-
(1999)
Plant J
, vol.19
, pp. 463-472
-
-
Bhatt, A.M.1
Lister, C.2
Page, T.3
Fransz, P.4
Findlay, K.5
-
16
-
-
76549103412
-
Reflections on studies of gene expression in aneuploids
-
Birchler JA (2010) Reflections on studies of gene expression in aneuploids. Biochem J 426:119-123
-
(2010)
Biochem J
, vol.426
, pp. 119-123
-
-
Birchler, J.A.1
-
17
-
-
0000016658
-
Modulation of protein levels in chromosomal dosage series of maize: The biochemical basis of aneuploid syndromes
-
Birchler JA, Newton KJ (1981) Modulation of protein levels in chromosomal dosage series of maize: the biochemical basis of aneuploid syndromes. Genetics 99:247-266
-
(1981)
Genetics
, vol.99
, pp. 247-266
-
-
Birchler, J.A.1
Newton, K.J.2
-
18
-
-
34250632677
-
The gene balance hypothesis: From classical genetics to modern genomics
-
DOI 10.1105/tpc.106.049338
-
Birchler JA, Veitia RA (2007) The gene balance hypothesis: from classical genetics to modern genomics. Plant Cell 19:395-402 (Pubitemid 46941666)
-
(2007)
Plant Cell
, vol.19
, Issue.2
, pp. 395-402
-
-
Birchler, J.A.1
Veitia, R.A.2
-
19
-
-
84866294456
-
Gene balance hypothesis: Connecting issues of dosage sensitivity across biological disciplines
-
Birchler JA, Veitia RA (2012) Gene balance hypothesis: connecting issues of dosage sensitivity across biological disciplines. Proc Natl Acad Sci USA 109:14746-14753
-
(2012)
Proc Natl Acad Sci USA
, vol.109
, pp. 14746-14753
-
-
Birchler, J.A.1
Veitia, R.A.2
-
20
-
-
0006609392
-
Variations in Datura due to changes in chromosome number
-
Blakeslee AF (1922) Variations in Datura due to changes in chromosome number. Am Nat 56:16-31
-
(1922)
Am Nat
, vol.56
, pp. 16-31
-
-
Blakeslee, A.F.1
-
21
-
-
77957209078
-
New Jimson Weeds from old chromosomes
-
Blakeslee AF (1934) New Jimson Weeds from old chromosomes. J Hered 24:81-108
-
(1934)
J Hered
, vol.24
, pp. 81-108
-
-
Blakeslee, A.F.1
-
22
-
-
0004754154
-
Chromosomal duplication and Mendelian phenomena in Datura mutants
-
Blakeslee AF, Belling J, Farnham ME (1920) Chromosomal duplication and Mendelian phenomena in Datura mutants. Science 52:388-390
-
(1920)
Science
, vol.52
, pp. 388-390
-
-
Blakeslee, A.F.1
Belling, J.2
Farnham, M.E.3
-
23
-
-
3142700743
-
Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes
-
DOI 10.1105/tpc.021345
-
Blanc G, Wolfe KH (2004) Widespread paleopolyploidy in model plant species inferred from age distributions of duplicate genes. Plant Cell 16:1667-1678 (Pubitemid 38908767)
-
(2004)
Plant Cell
, vol.16
, Issue.7
, pp. 1667-1678
-
-
Blanc, G.1
Wolfe, K.H.2
-
24
-
-
0037313579
-
A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome
-
DOI 10.1101/gr.751803
-
Blanc G, Hokamp K, Wolfe KH (2003) A recent polyploidy superimposed on older large-scale duplications in the Arabidopsis genome. Genome Res 13:137-144 (Pubitemid 36575763)
-
(2003)
Genome Research
, vol.13
, Issue.2
, pp. 137-144
-
-
Blanc, G.1
Hokamp, K.2
Wolfe, K.H.3
-
25
-
-
33745067419
-
The gain and loss of genes during 600 million years of vertebrate evolution
-
Blomme T, Vendepoele K, De Bodt S, Simillion C, Maere S, Van de Peer Y (2006) The gain and loss of genes during 600 million years of vertebrate evolution. Genome Biol 7:R43
-
(2006)
Genome Biol
, vol.7
-
-
Blomme, T.1
Vendepoele, K.2
De Bodt, S.3
Simillion, C.4
Maere, S.5
Van De Peer, Y.6
-
26
-
-
34548676152
-
Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants
-
Bomblies K, Lempe J, Epple P et al (2007) Autoimmune response as a mechanism for a Dobzhansky-Muller-type incompatibility syndrome in plants. PLoS Biol 5:e236
-
(2007)
PLoS Biol
, vol.5
-
-
Bomblies, K.1
Lempe, J.2
Epple, P.3
-
27
-
-
4344582144
-
Crossover/noncrossover differentiation, synaptonemal complex formation, and regulatory surveillance at the leptotene/zygotene transition of meiosis
-
DOI 10.1016/S0092-8674(04)00292-2, PII S0092867404002922
-
Börner GV, Kleckner N, Hunter N (2004) Crossover/noncrossover differentiation, synaptonemal complex formation, and regulatory surveillance at the leptotene/zygotene transition of meiosis. Cell 117:29-45 (Pubitemid 38469896)
-
(2004)
Cell
, vol.117
, Issue.1
, pp. 29-45
-
-
Borner, G.V.1
Kleckner, N.2
Hunter, N.3
-
28
-
-
0037468758
-
Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events
-
DOI 10.1038/nature01521
-
Bowers JE, Chapman BA, Rong J, Paterson AH (2003) Unravelling angiosperm genome evolution by phylogenetic analysis of chromosomal duplication events. Nature 422:433-438 (Pubitemid 36411396)
-
(2003)
Nature
, vol.422
, Issue.6930
, pp. 433-438
-
-
Bowers, J.E.1
Chapman, B.A.2
Rong, J.3
Paterson, A.H.4
-
29
-
-
0000834093
-
Sex in relation to chromosomes and genes
-
doi:10.2307/2456354
-
Bridges CB (1925) Sex in relation to chromosomes and genes.Am Nat 59:127-137. doi:10.2307/2456354
-
(1925)
Am Nat
, vol.59
, pp. 127-137
-
-
Bridges, C.B.1
-
30
-
-
77950947915
-
Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirus
-
Buggs RJ, Elliott NM, Zhang L et al (2010) Tissue-specific silencing of homoeologs in natural populations of the recent allopolyploid Tragopogon mirus. New Phytol 186:175-183
-
(2010)
New Phytol
, vol.186
, pp. 175-183
-
-
Buggs, R.J.1
Elliott, N.M.2
Zhang, L.3
-
31
-
-
79953789287
-
Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant
-
Buggs RJA, Zhang L, Miles N et al (2011) Transcriptomic shock generates evolutionary novelty in a newly formed, natural allopolyploid plant. Curr Biol 21:551-556
-
(2011)
Curr Biol
, vol.21
, pp. 551-556
-
-
Buggs, R.J.A.1
Zhang, L.2
Miles, N.3
-
32
-
-
2942620598
-
The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana
-
Cannon SB, Mitra A, Baumgarten A, Young ND, May G (2004) The roles of segmental and tandem gene duplication in the evolution of large gene families in Arabidopsis thaliana. BMC Plant Biol 4:10
-
(2004)
BMC Plant Biol
, vol.4
, pp. 10
-
-
Cannon, S.B.1
Mitra, A.2
Baumgarten, A.3
Young, N.D.4
May, G.5
-
33
-
-
77349110224
-
Chromosome and DNA methylation dynamics during meiosis in the autotetraploid Arabidopsis arenosa
-
Carvalho A, Delgado M, Barao A et al (2010) Chromosome and DNA methylation dynamics during meiosis in the autotetraploid Arabidopsis arenosa. Sex Plant Reprod 23:29-37
-
(2010)
Sex Plant Reprod
, vol.23
, pp. 29-37
-
-
Carvalho, A.1
Delgado, M.2
Barao, A.3
-
34
-
-
33646859550
-
Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana
-
Casneuf T, De Bodt S, Raes J, Maere S, Van de Peer Y (2006) Nonrandom divergence of gene expression following gene and genome duplications in the flowering plant Arabidopsis thaliana. Genome Biol 7:R13
-
(2006)
Genome Biol
, vol.7
-
-
Casneuf, T.1
De Bodt, S.2
Raes, J.3
Maere, S.4
Van De Peer, Y.5
-
35
-
-
78650334271
-
Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners
-
Chang PL, Dilkes BP, McMahon M et al (2010) Homoeolog-specific retention and use in allotetraploid Arabidopsis suecica depends on parent of origin and network partners. Genome Biol 11:R125
-
(2010)
Genome Biol
, vol.11
-
-
Chang, P.L.1
Dilkes, B.P.2
McMahon, M.3
-
36
-
-
84881243153
-
Polyploids exhibit higher potassium uptake and salinity tolerance in Arabidopsis
-
Chao D-Y, Dilkes B, Luo H et al (2013) Polyploids exhibit higher potassium uptake and salinity tolerance in Arabidopsis. Science 341:658-659
-
(2013)
Science
, vol.341
, pp. 658-659
-
-
Chao, D.-Y.1
Dilkes, B.2
Luo, H.3
-
37
-
-
34248328910
-
Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids
-
Chen Z (2007) Genetic and epigenetic mechanisms for gene expression and phenotypic variation in plant polyploids. Annu Rev Plant Biol 58:377-406
-
(2007)
Annu Rev Plant Biol
, vol.58
, pp. 377-406
-
-
Chen, Z.1
-
38
-
-
75949117260
-
Molecular mechanisms of polyploidy and hybrid vigor
-
Chen ZJ (2010) Molecular mechanisms of polyploidy and hybrid vigor. Trends Plant Sci 15:57-71
-
(2010)
Trends Plant Sci
, vol.15
, pp. 57-71
-
-
Chen, Z.J.1
-
39
-
-
84879412664
-
Genomic and epigenetic insights into the molecular bases of heterosis
-
Chen ZJ (2013) Genomic and epigenetic insights into the molecular bases of heterosis. Nat Rev Genet 14:471-482
-
(2013)
Nat Rev Genet
, vol.14
, pp. 471-482
-
-
Chen, Z.J.1
-
40
-
-
0030799238
-
Epigenetic silencing of RNA polymerase I transcription: A role for DNA methylation and histone modification in nucleolar dominance
-
Chen ZJ, Pikaard CS (1997) Epigenetic silencing of RNA polymerase I transcription: a role for DNA methylation and histone modification in nucleolar dominance. Genes Dev 11:2124-2136 (Pubitemid 27369106)
-
(1997)
Genes and Development
, vol.11
, Issue.16
, pp. 2124-2136
-
-
Chen, Z.J.1
Pikaard, C.S.2
-
41
-
-
13044270399
-
Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids
-
DOI 10.1073/pnas.95.25.14891
-
Chen ZJ, Comai L, Pikaard CS (1998) Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids. Proc Natl Acad Sci U S A 95:14891-14896 (Pubitemid 29003727)
-
(1998)
Proceedings of the National Academy of Sciences of the United States of America
, vol.95
, Issue.25
, pp. 14891-14896
-
-
Chen, J.1
Comai, L.2
Pikaard, C.S.3
-
42
-
-
0347982606
-
The development of an Arabidopsis model system for genome-wide analysis of polyploidy effects
-
DOI 10.1111/j.1095-8312.2004.00351.x
-
Chen ZJ, Wang J, Tian L et al (2004) The development of an Arabidopsis model systemfor genome-wide analysis of polyploidy effects. Biol J Linn Soc 82:689-700 (Pubitemid 39123354)
-
(2004)
Biological Journal of the Linnean Society
, vol.82
, Issue.4
, pp. 689-700
-
-
Chen, Z.J.1
Wang, J.2
Tian, L.3
Lee, H.-S.4
Wang, J.J.5
Chen, M.6
Lee, J.J.7
Josefsson, C.8
Madlung, A.9
Watson, B.10
Lippman, Z.11
Vaughn, M.12
Pires, J.C.13
Colot, V.14
Doerge, R.W.15
Martienssen, R.A.16
Comai, L.17
Osborn, T.C.18
-
43
-
-
67650301840
-
Gene expression in a wild autopolyploid sunflower series
-
Church SA, Spaulding EJ (2009) Gene expression in a wild autopolyploid sunflower series. J Hered 100:491-495
-
(2009)
J Hered
, vol.100
, pp. 491-495
-
-
Church, S.A.1
Spaulding, E.J.2
-
44
-
-
77950943203
-
Genetic regulation of meiosis in polyploid species: New insights into an old question
-
Cifuentes M, Grandont L, Moore G, Chevre AM, Jenczewski E (2010) Genetic regulation of meiosis in polyploid species: new insights into an old question. New Phytol 186:29-36
-
(2010)
New Phytol
, vol.186
, pp. 29-36
-
-
Cifuentes, M.1
Grandont, L.2
Moore, G.3
Chevre, A.M.4
Jenczewski, E.5
-
45
-
-
79953703428
-
Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication
-
Coate JE, Schlueter JA, Whaley AM, Doyle JJ (2011) Comparative evolution of photosynthetic genes in response to polyploid and nonpolyploid duplication. Plant Phys 155:2081-2095
-
(2011)
Plant Phys
, vol.155
, pp. 2081-2095
-
-
Coate, J.E.1
Schlueter, J.A.2
Whaley, A.M.3
Doyle, J.J.4
-
46
-
-
33644681986
-
The advantages and disadvantages of being polyploid
-
Comai L (2005) The advantages and disadvantages of being polyploid. Nat Rev Genet 6:836-846
-
(2005)
Nat Rev Genet
, vol.6
, pp. 836-846
-
-
Comai, L.1
-
47
-
-
0033789617
-
Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids
-
Comai L, Tyagi AP, Winter K et al (2000) Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids. Plant Cell 12:1551-1568
-
(2000)
Plant Cell
, vol.12
, pp. 1551-1568
-
-
Comai, L.1
Tyagi, A.P.2
Winter, K.3
-
48
-
-
0037509896
-
FISH analysis of meiosis in Arabidopsis allopolyploids
-
DOI 10.1023/A:1022883709060
-
Comai L, Tyagi A, Lysak M (2003) FISH analysis of meiosis in Arabidopsis allopolyploids. Chromosom Res 11:217-226 (Pubitemid 36549523)
-
(2003)
Chromosome Research
, vol.11
, Issue.3
, pp. 217-226
-
-
Comai, L.1
Tyagi, A.P.2
Lysak, M.A.3
-
49
-
-
56549119570
-
Turning a hobby into a job: How duplicated genes find new functions
-
DOI 10.1038/nrg2482, PII NRG2482
-
Conant GC, Wolfe KH (2008) Turning a hobby into a job: how duplicated genes find new functions. Nat Rev Genet 9:938-950 (Pubitemid 352719432)
-
(2008)
Nature Reviews Genetics
, vol.9
, Issue.12
, pp. 938-950
-
-
Conant, G.C.1
Wolfe, K.H.2
-
50
-
-
2342630554
-
Characterizing polyploidy in Arabidopsis lyrata using chromosome counts and flow cytometry
-
DOI 10.1139/b03-134
-
Dart S, Kron P, Mable BK (2004) Characterizing polyploidy in Arabidopsis lyrata using chromosome counts and flow cytometry. Can J Bot 82:185-197 (Pubitemid 38600948)
-
(2004)
Canadian Journal of Botany
, vol.82
, Issue.2
, pp. 185-197
-
-
Dart, S.1
Kron, P.2
Mable, B.K.3
-
51
-
-
84874229463
-
Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants
-
De Smet R, Adams KL, Vandepoele K, Van Montagu MCE, Maere S, Van de Peer Y (2013) Convergent gene loss following gene and genome duplications creates single-copy families in flowering plants. Proc Natl Acad Sci USA 110:2898-2903
-
(2013)
Proc Natl Acad Sci USA
, vol.110
, pp. 2898-2903
-
-
De Smet, R.1
Adams, K.L.2
Vandepoele, K.3
Van Montagu, M.C.E.4
Maere, S.5
Van De Peer, Y.6
-
52
-
-
84870819083
-
Production of diploid male gametes in Arabidopsis by cold-induced destabilization of postmeiotic radial microtubule arrays
-
De Storme N, Copenhaver GP, Geelen D (2012) Production of diploid male gametes in Arabidopsis by cold-induced destabilization of postmeiotic radial microtubule arrays. Plant Physiol 160:1808-1826
-
(2012)
Plant Physiol
, vol.160
, pp. 1808-1826
-
-
De Storme, N.1
Copenhaver, G.P.2
Geelen, D.3
-
53
-
-
26444603772
-
Two rounds of whole genome duplication in the ancestral vertebrate
-
Dehal P, Boore JL (2005) Two rounds of whole genome duplication in the ancestral vertebrate. Plos Biol 3:e314
-
(2005)
Plos Biol
, vol.3
-
-
Dehal, P.1
Boore, J.L.2
-
54
-
-
57749100022
-
Evolutionary genetics of genome merger and doubling in plants
-
Doyle JJ, Flagel LE, Paterson AH et al (2008) Evolutionary genetics of genome merger and doubling in plants. Annu Rev Genet 42:443-461
-
(2008)
Annu Rev Genet
, vol.42
, pp. 443-461
-
-
Doyle, J.J.1
Flagel, L.E.2
Paterson, A.H.3
-
55
-
-
33646542012
-
Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance
-
DOI 10.1101/gad.1417706
-
Earley K, Lawrence RJ, Pontes O et al (2006) Erasure of histone acetylation by Arabidopsis HDA6 mediates large-scale gene silencing in nucleolar dominance. Genes Dev 20:1283-1293 (Pubitemid 43727589)
-
(2006)
Genes and Development
, vol.20
, Issue.10
, pp. 1283-1293
-
-
Earley, K.1
Lawrence, R.J.2
Pontes, O.3
Reuther, R.4
Enciso, A.J.5
Silva, M.6
Neves, N.7
Gross, M.8
Viegas, W.9
Pikaard, C.S.10
-
56
-
-
70349682921
-
Gene and genome duplications: The impact of dosage-sensitivity on the fate of nuclear genes
-
Edger PP, Pires JC (2009) Gene and genome duplications: the impact of dosage-sensitivity on the fate of nuclear genes. Chrom Res 17:699-717
-
(2009)
Chrom Res
, vol.17
, pp. 699-717
-
-
Edger, P.P.1
Pires, J.C.2
-
57
-
-
79751527987
-
Angiosperm polyploids and their road to evolutionary success
-
Fawcett JA, Van de Peer Y (2010) Angiosperm polyploids and their road to evolutionary success. Trends Ecol Evol 2:e3
-
(2010)
Trends Ecol Evol
, vol.2
-
-
Fawcett, J.A.1
Van De Peer, Y.2
-
58
-
-
65249143921
-
Plants with doubled genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event
-
Fawcett JA, Maere S, Van de Peer Y (2009) Plants with doubled genomes might have had a better chance to survive the Cretaceous-Tertiary extinction event. Proc Natl Acad Sci USA 106:5737-5742
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 5737-5742
-
-
Fawcett, J.A.1
Maere, S.2
Van De Peer, Y.3
-
59
-
-
0030671532
-
Rapid elimination of low-copy DNA sequences in polyploid wheat: A possible mechanism for differentiation of homoeologous chromosomes
-
Feldman M, Liu B, Segal G et al (1997) Rapid elimination of lowcopy DNA sequences in polyploid wheat: a possible mechanism for differentiation of homoeologous chromosomes. Genetics 147:1381-1387 (Pubitemid 27467476)
-
(1997)
Genetics
, vol.147
, Issue.3
, pp. 1381-1387
-
-
Feldman, M.1
Liu, B.2
Segal, G.3
Abbo, S.4
Levy, A.A.5
Vega, J.M.6
-
60
-
-
84859179125
-
Interhomolog crossing-over and synapsis in Arabidopsis meiosis are dependent on the chromosome axis protein AtASY3
-
Ferdous M, Higgins JD, Osman K, Lambing C, Roitinger E, Mechtler K, Armstrong SJ, Perry R, Pradillo M, Cuñado M, Franklin FCH (2012) Interhomolog crossing-over and synapsis in Arabidopsis meiosis are dependent on the chromosome axis protein AtASY3. PLoS Genet 8:e1002507
-
(2012)
PLoS Genet
, vol.8
-
-
Ferdous, M.1
Higgins, J.D.2
Osman, K.3
Lambing, C.4
Roitinger, E.5
Mechtler, K.6
Armstrong, S.J.7
Perry, R.8
Pradillo, M.9
Cuñado, M.10
Franklin, F.C.H.11
-
61
-
-
42649126373
-
Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct modes of expression evolution
-
Flagel L, Udall J, Nettleton D, Wendel J (2008) Duplicate gene expression in allopolyploid Gossypium reveals two temporally distinct modes of expression evolution. BMC Biol 6:16
-
(2008)
BMC Biol
, vol.6
, pp. 16
-
-
Flagel, L.1
Udall, J.2
Nettleton, D.3
Wendel, J.4
-
62
-
-
0030783086
-
Detailed comparative mapping of cereal chromosome regions corresponding to the Ph1 locus in wheat
-
Foote T, Roberts M, Kurata N, Sasaki T, Moore G (1997) Detailed comparative mapping of cereal chromosome regions corresponding to the Ph1 locus in wheat. Genetics 147:801-807 (Pubitemid 27418587)
-
(1997)
Genetics
, vol.147
, Issue.2
, pp. 801-807
-
-
Foote, T.1
Roberts, M.2
Kurata, N.3
Sasaki, T.4
Moore, G.5
-
63
-
-
67651039811
-
Bias in plant gene content following different sorts of duplication: Tandem, whole-genome, segmental or by transposition
-
Freeling M (2009) Bias in plant gene content following different sorts of duplication: tandem, whole-genome, segmental or by transposition. Annu Rev Plant Biol 60:433-453
-
(2009)
Annu Rev Plant Biol
, vol.60
, pp. 433-453
-
-
Freeling, M.1
-
64
-
-
77950955273
-
Homoeologous recombination in allopolyploids: The polyploid ratchet
-
Gaeta RT, Pires JC (2010) Homoeologous recombination in allopolyploids: the polyploid ratchet. New Phytol 186:18-28
-
(2010)
New Phytol
, vol.186
, pp. 18-28
-
-
Gaeta, R.T.1
Pires, J.C.2
-
65
-
-
37849034684
-
Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype
-
Gaeta RT, Pires JC, Iniguez-Luy F et al (2007) Genomic changes in resynthesized Brassica napus and their effect on gene expression and phenotype. Plant Cell 19:3403-3417
-
(2007)
Plant Cell
, vol.19
, pp. 3403-3417
-
-
Gaeta, R.T.1
Pires, J.C.2
Iniguez-Luy, F.3
-
66
-
-
62849120346
-
Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer oligo microarrays
-
Gaeta RT, Yoo S-Y, Pires JC et al (2009) Analysis of gene expression in resynthesized Brassica napus allopolyploids using Arabidopsis 70mer oligo microarrays. PLoS One 4:e4760
-
(2009)
PLoS One
, vol.4
-
-
Gaeta, R.T.1
Yoo, S.-Y.2
Pires, J.C.3
-
67
-
-
35348820582
-
Divergence in expression between duplicated genes in arabidopsis
-
DOI 10.1093/molbev/msm158
-
Ganko EW, Meyers BC, Vision TJ (2007) Divergence in expression between duplicated genes in Arabidopsis.Mol Biol Evol 24:2298-2309 (Pubitemid 47574728)
-
(2007)
Molecular Biology and Evolution
, vol.24
, Issue.10
, pp. 2298-2309
-
-
Ganko, E.W.1
Meyers, B.C.2
Vision, T.J.3
-
68
-
-
0027185193
-
Fine physical mapping of Ph1, a chromosome pairing regulator gene in polyploid wheat
-
Gill KS, Gill BS, Endo TR, Mukai Y (1993) Fine physical mapping of Ph1, a chromosome pairing regulator gene in polyploid wheat. Genetics 134:1231-1236 (Pubitemid 23220044)
-
(1993)
Genetics
, vol.134
, Issue.4
, pp. 1231-1236
-
-
Gill, K.S.1
Gill, B.S.2
Endo, T.R.3
Mukai, Y.4
-
69
-
-
77953212314
-
The relationship among gene expression, the evolution of gene dosage, and the rate of protein evolution
-
Paramecium Post-Genomics Consortium
-
Gout J-F, Kahn D, Duret L, Paramecium Post-Genomics Consortium (2010) The relationship among gene expression, the evolution of gene dosage, and the rate of protein evolution. PLoS Genet 6(5):e1000944
-
(2010)
PLoS Genet
, vol.6
, Issue.5
-
-
Gout, J.-F.1
Kahn, D.2
Duret, L.3
-
72
-
-
84857772825
-
The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat
-
Greer E, Martín AC, Pendle A et al (2012) The Ph1 locus suppresses Cdk2-type activity during premeiosis and meiosis in wheat. Plant Cell 24:152-162
-
(2012)
Plant Cell
, vol.24
, pp. 152-162
-
-
Greer, E.1
Martín, A.C.2
Pendle, A.3
-
73
-
-
32544454998
-
Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat
-
DOI 10.1038/nature04434, PII NATURE04434
-
Griffiths S, Sharp R, Foote T et al (2006) Molecular characterization of Ph1 as a major chromosome pairing locus in polyploid wheat. Nature 439:749-752 (Pubitemid 43237624)
-
(2006)
Nature
, vol.439
, Issue.7077
, pp. 749-752
-
-
Griffiths, S.1
Sharp, R.2
Foote, T.N.3
Bertin, I.4
Wanous, M.5
Reader, S.6
Colas, I.7
Moore, G.8
-
74
-
-
0347033256
-
Role of duplicate genes in genetic robustness against null mutations
-
DOI 10.1038/nature01198
-
Gu Z, Steinmetz LM, Gu X et al (2003) Role of duplicate genes in genetic robustness against null mutations. Nature 421:63-66 (Pubitemid 36077084)
-
(2003)
Nature
, vol.421
, Issue.6918
, pp. 63-66
-
-
Gu, Z.1
Steinmetz, L.M.2
Gu, X.3
Scharfe, C.4
Davis, R.W.5
Li, W.-H.6
-
75
-
-
0030003670
-
Dosage effects on gene expression in a maize ploidy series
-
Guo M, Davis D, Birchler JA (1996) Dosage effects on gene expression in a maize ploidy series. Genetics 142:1349-1355 (Pubitemid 26115513)
-
(1996)
Genetics
, vol.142
, Issue.4
, pp. 1349-1355
-
-
Guo, M.1
Davis, D.2
Birchler, J.A.3
-
76
-
-
84878442409
-
Function relaxation followed by diversifying selection after whole genome duplication in flowering plants
-
Guo H, Lee T-H, Wang X, Paterson AH (2013) Function relaxation followed by diversifying selection after whole genome duplication in flowering plants. Plant Phys 162:769-778
-
(2013)
Plant Phys
, vol.162
, pp. 769-778
-
-
Guo, H.1
Lee, T.-H.2
Wang, X.3
Paterson, A.H.4
-
77
-
-
70449588694
-
Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids
-
Ha M, Lu J, Tian L et al (2009) Small RNAs serve as a genetic buffer against genomic shock in Arabidopsis interspecific hybrids and allopolyploids. Proc Natl Acad Sci USA 106:17835-17840
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 17835-17840
-
-
Ha, M.1
Lu, J.2
Tian, L.3
-
78
-
-
84982060870
-
Über Polyploidie in Beziehung zu Klima, Ökologie und Phylogenie
-
Hagerup O (1932) Über Polyploidie in Beziehung zu Klima, Ökologie und Phylogenie. Hereditas 16:19-40
-
(1932)
Hereditas
, vol.16
, pp. 19-40
-
-
Hagerup, O.1
-
79
-
-
66049128566
-
Distinguishing among evolutionary models for the maintenance of gene duplicates
-
Hahn MW (2009) Distinguishing among evolutionary models for the maintenance of gene duplicates. J Hered 100:605-617
-
(2009)
J Hered
, vol.100
, pp. 605-617
-
-
Hahn, M.W.1
-
80
-
-
52049107891
-
Insertion polymorphism and nucleotide diversity in autotetraploid and allotetraploid Arabidopsis species
-
Hazzouri KM, Mohajer A, Dejak SI, Otto SP, Wright SI (2008) Insertion polymorphism and nucleotide diversity in autotetraploid and allotetraploid Arabidopsis species. Genetics 179:581-592
-
(2008)
Genetics
, vol.179
, pp. 581-592
-
-
Hazzouri, K.M.1
Mohajer, A.2
Dejak, S.I.3
Otto, S.P.4
Wright, S.I.5
-
81
-
-
84881156882
-
Lessons from natural and artificial polyploids in higher plants
-
Hegarty M, Coate J, Sherman-Broyles S, Abbott R, Hiscock S, Doyle J (2013) Lessons from natural and artificial polyploids in higher plants. Cytogenet Genome Res 140:204-225
-
(2013)
Cytogenet Genome Res
, vol.140
, pp. 204-225
-
-
Hegarty, M.1
Coate, J.2
Sherman-Broyles, S.3
Abbott, R.4
Hiscock, S.5
Doyle, J.6
-
82
-
-
84869505399
-
Control of meiotic recombination frequency in plant genomes
-
Henderson IR (2012) Control of meiotic recombination frequency in plant genomes. Curr Op Plant Biol 15:556-561
-
(2012)
Curr Op Plant Biol
, vol.15
, pp. 556-561
-
-
Henderson, I.R.1
-
83
-
-
25444464339
-
Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response
-
DOI 10.1534/genetics.104.037788
-
Henry IM, Dilkes BP, Young K et al (2005) Aneuploidy and genetic variation in the Arabidopsis thaliana triploid response. Genetics 170:1979-1988 (Pubitemid 41362847)
-
(2005)
Genetics
, vol.170
, Issue.4
, pp. 1979-1988
-
-
Henry, I.M.1
Dilkes, B.P.2
Young, K.3
Watson, B.4
Wu, H.5
Comai, L.6
-
84
-
-
33749247048
-
Molecular karyotyping and aneuploidy detection in Arabidopsis thaliana using quantitative fluorescent polymerase chain reaction
-
DOI 10.1111/j.1365-313X.2006.02871.x
-
Henry I, Dilkes B, Comai L (2006) Molecular karyotyping and aneuploidy detection in Arabidopsis thaliana using quantitative fluorescent polymerase chain reaction. Plant J 48:307-319 (Pubitemid 44484871)
-
(2006)
Plant Journal
, vol.48
, Issue.2
, pp. 307-319
-
-
Henry, I.M.1
Dilkes, B.P.2
Comai, L.3
-
85
-
-
34247647199
-
Genetic basis for dosage sensitivity in Arabidopsis thaliana
-
Henry IM, Dilkes BP, Comai L (2007) Genetic basis for dosage sensitivity in Arabidopsis thaliana. PLoS Genet 3:e70
-
(2007)
PLoS Genet
, vol.3
-
-
Henry, I.M.1
Dilkes, B.P.2
Comai, L.3
-
86
-
-
70549090210
-
Dosage and parent-of-origin effects shaping aneuploid swarms in A. thaliana
-
Henry IM, Dilkes BP, Tyagi AP et al (2009) Dosage and parent-of-origin effects shaping aneuploid swarms in A. thaliana. Heredity 103:458-468
-
(2009)
Heredity
, vol.103
, pp. 458-468
-
-
Henry, I.M.1
Dilkes, B.P.2
Tyagi, A.P.3
-
87
-
-
79251575297
-
Phenotypic consequences of aneuploidy in Arabidopsis thaliana
-
Henry IM, Dilkes BP, Miller ES et al (2010) Phenotypic consequences of aneuploidy in Arabidopsis thaliana. Genetics 186:1231-1245
-
(2010)
Genetics
, vol.186
, pp. 1231-1245
-
-
Henry, I.M.1
Dilkes, B.P.2
Miller, E.S.3
-
88
-
-
84896842778
-
The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis
-
AOP (in press)
-
Henry IM, Dilkes BP, Tyagi AP, et al. (2014) The BOY NAMED SUE quantitative trait locus confers increased meiotic stability to an adapted natural allopolyploid of Arabidopsis. Plant Cell. AOP (in press)
-
(2014)
Plant Cell
-
-
Henry, I.M.1
Dilkes, B.P.2
Tyagi, A.P.3
-
89
-
-
84857900705
-
Population fragmentation causes randomly fixed genotypes in populations of Arabidopsis kamchatica in the Japanese Archipelago
-
Higashi H, Ikeda H, Setoguchi H (2012) Population fragmentation causes randomly fixed genotypes in populations of Arabidopsis kamchatica in the Japanese Archipelago. J Plant Res 125:223-233
-
(2012)
J Plant Res
, vol.125
, pp. 223-233
-
-
Higashi, H.1
Ikeda, H.2
Setoguchi, H.3
-
90
-
-
26944484426
-
The Arabidopsis synaptonemal complex protein ZYP1 is required for chromosome synapsis and normal fidelity of crossing over
-
DOI 10.1101/gad.354705
-
Higgins JD, Sanchez-Moran E, Armstrong SJ, Jones GH, Franklin FCH (2005) The Arabidopsis synaptonemal complex protein ZYP1 is required for chromosome synapsis and normal fidelity of crossing over. Genes Dev 19:2488-2500 (Pubitemid 41483696)
-
(2005)
Genes and Development
, vol.19
, Issue.20
, pp. 2488-2500
-
-
Higgins, J.D.1
Sanchez-Moran, E.2
Armstrong, S.J.3
Jones, G.H.4
Franklin, F.C.H.5
-
91
-
-
84900868269
-
Cytological techniques to analyze meiosis in Arabidopsis arenosa for invesitgating adaptation to polyploidy
-
Higgins JD, Wright KM, Bomblies K, Franklin FCH (2013) Cytological techniques to analyze meiosis in Arabidopsis arenosa for invesitgating adaptation to polyploidy. Front Plant Sci 4:546
-
(2013)
Front Plant Sci
, vol.4
, pp. 546
-
-
Higgins, J.D.1
Wright, K.M.2
Bomblies, K.3
Franklin, F.C.H.4
-
92
-
-
84981835205
-
Effects of selection for meiotic behaviour in autotetraploid rye
-
Hilpert G (1957) Effects of selection for meiotic behaviour in autotetraploid rye. Hereditas 43:318-322
-
(1957)
Hereditas
, vol.43
, pp. 318-322
-
-
Hilpert, G.1
-
93
-
-
23244444822
-
Evolution of the realized climatic niche in the genus: Arabidopsis (Brassicaceae)
-
Hoffmann MH (2005) Evolution of the realized climatic niche in the genus: Arabidopsis (Brassicaceae). Evolution 59:1425-1436
-
(2005)
Evolution
, vol.59
, pp. 1425-1436
-
-
Hoffmann, M.H.1
-
94
-
-
84872010144
-
Genetic adaptation associated with genome-doubling in autotetraploid Arabidopsis arenosa
-
Hollister JD, Arnold BJ, Svedin E, Xue KS, Dilkes BP, Bomblies K (2012) Genetic adaptation associated with genome-doubling in autotetraploid Arabidopsis arenosa. PLoS Genet 8:e1003093
-
(2012)
PLoS Genet
, vol.8
-
-
Hollister, J.D.1
Arnold, B.J.2
Svedin, E.3
Xue, K.S.4
Dilkes, B.P.5
Bomblies, K.6
-
95
-
-
79955468851
-
The Arabidopsis lyrata genome sequence and the basis of rapid genome size change
-
Hu TT, Pattyn P, Bakker EG et al (2011) The Arabidopsis lyrata genome sequence and the basis of rapid genome size change. Nat Genet 43:476-481
-
(2011)
Nat Genet
, vol.43
, pp. 476-481
-
-
Hu, T.T.1
Pattyn, P.2
Bakker, E.G.3
-
96
-
-
55449135552
-
Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana
-
Huettel B, Kreil DP, Matzke M, Matzke AJM (2008) Effects of aneuploidy on genome structure, expression, and interphase organization in Arabidopsis thaliana. PLoS Genet 4:e1000226
-
(2008)
PLoS Genet
, vol.4
-
-
Huettel, B.1
Kreil, D.P.2
Matzke, M.3
Matzke, A.J.M.4
-
97
-
-
84930749316
-
The incidence of polyploidy in natural plant populations: Major patterns and evolutionary processes
-
Leitch IJ et al (eds) Springer, Wien
-
Husband BC, Baldwin SJ, Suda J (2013) The incidence of polyploidy in natural plant populations: major patterns and evolutionary processes. In: Leitch IJ et al (eds) Plant genome diversity, vol 2. Springer, Wien, pp 255-276
-
(2013)
Plant Genome Diversity
, vol.2
, pp. 255-276
-
-
Husband, B.C.1
Baldwin, S.J.2
Suda, J.3
-
98
-
-
75549087305
-
The evolution of gene duplications: Classifying and distinguishing between models
-
Innan H, Kondrashov F (2010) The evolution of gene duplications: classifying and distinguishing between models. Nat Rev Genet 11:97-108
-
(2010)
Nat Rev Genet
, vol.11
, pp. 97-108
-
-
Innan, H.1
Kondrashov, F.2
-
99
-
-
33646890870
-
A unique recent origin of the allotetraploid species Arabidopsis suecica: Evidence from nuclear DNA markers
-
DOI 10.1093/molbev/msk006
-
Jakobsson M, Hagenblad J, Tavare S et al (2006) A unique recent origin of the allotetraploid species Arabidopsis suecica: evidence from nuclear DNA markers. Mol Biol Evol 23:1217-1231 (Pubitemid 43781596)
-
(2006)
Molecular Biology and Evolution
, vol.23
, Issue.6
, pp. 1217-1231
-
-
Jakobsson, M.1
Hagenblad, J.2
Tavare, S.3
Sall, T.4
Hallden, C.5
Lind-Hallden, C.6
Nordborg, M.7
-
100
-
-
0038124422
-
PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids
-
Jenczewski E, Eber F, Grimaud A et al (2003) PrBn, a major gene controlling homeologous pairing in oilseed rape (Brassica napus) haploids. Genetics 164:645-653 (Pubitemid 36773501)
-
(2003)
Genetics
, vol.164
, Issue.2
, pp. 645-653
-
-
Jenczewski, E.1
Eber, F.2
Grimaud, A.3
Huet, S.4
Lucas, M.O.5
Monod, H.6
Chevre, A.M.7
-
101
-
-
84886903344
-
The effect of genome duplication on seed germination and seedling growth of rice under salt stress
-
Jiang A, Gan L, Tu Y, Ma H, Zhang J, Song Z, He Y, Cai D, Xue X (2013a) The effect of genome duplication on seed germination and seedling growth of rice under salt stress. Aust J Crop Sci 12:1814-1821
-
(2013)
Aust J Crop Sci
, vol.12
, pp. 1814-1821
-
-
Jiang, A.1
Gan, L.2
Tu, Y.3
Ma, H.4
Zhang, J.5
Song, Z.6
He, Y.7
Cai, D.8
Xue, X.9
-
102
-
-
84875732837
-
Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants
-
Jiang W-K, Liu Y-L, Xia E-H, Gao L-Z (2013b) Prevalent role of gene features in determining evolutionary fates of whole-genome duplication duplicated genes in flowering plants. Plant Phys 161:1844-1861
-
(2013)
Plant Phys
, vol.161
, pp. 1844-1861
-
-
Jiang, W.-K.1
Liu, Y.-L.2
Xia, E.-H.3
Gao, L.-Z.4
-
103
-
-
82255170829
-
Interspecific and interploidal gene flow in Central European Arabidopsis (Brassicaceae)
-
Jørgensen MH, Ehrich D, Schmickl R et al (2011) Interspecific and interploidal gene flow in Central European Arabidopsis (Brassicaceae). BMC Evol Biol 11:346
-
(2011)
BMC Evol Biol
, vol.11
, pp. 346
-
-
Jørgensen, M.H.1
Ehrich, D.2
Schmickl, R.3
-
104
-
-
33745668459
-
Parent-Dependent Loss of Gene Silencing during Interspecies Hybridization
-
DOI 10.1016/j.cub.2006.05.045, PII S0960982206016289
-
Josefsson C, Dilkes B, Comai L (2006) Parent-dependent loss of gene silencing during interspecies hybridization. Curr Biol 16:1322-1328 (Pubitemid 43975368)
-
(2006)
Current Biology
, vol.16
, Issue.13
, pp. 1322-1328
-
-
Josefsson, C.1
Dilkes, B.2
Comai, L.3
-
105
-
-
0012200351
-
Chromosome behaviour and fertility of the raw and evolved synthetic tetraploids of pearl millet, Pennisetum typhoides Stapf et Hubb
-
Juahar P (1970) Chromosome behaviour and fertility of the raw and evolved synthetic tetraploids of pearl millet, Pennisetum typhoides Stapf et Hubb. Genetika 41:407-424
-
(1970)
Genetika
, vol.41
, pp. 407-424
-
-
Juahar, P.1
-
106
-
-
0037226595
-
Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat
-
DOI 10.1038/ng1063
-
Kashkush K, Feldman M, Levy AA (2003) Transcriptional activation of retrotransposons alters the expression of adjacent genes in wheat. Nat Genet 33:102-106 (Pubitemid 36068691)
-
(2003)
Nature Genetics
, vol.33
, Issue.1
, pp. 102-106
-
-
Kashkush, K.1
Feldman, M.2
Levy, A.A.3
-
108
-
-
76749163717
-
The impact of the triploid block on the origin and evolution of polyploid plants
-
Köhler C, Mittelsten Scheid O, Erilova A (2010) The impact of the triploid block on the origin and evolution of polyploid plants. Trends Genet 26:142-148
-
(2010)
Trends Genet
, vol.26
, pp. 142-148
-
-
Köhler, C.1
Mittelsten Scheid, O.2
Erilova, A.3
-
109
-
-
16444381885
-
A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes
-
Koonin EV, Federova ND, Jackson JD et al (2004) A comprehensive evolutionary classification of proteins encoded in complete eukaryotic genomes. Genome Biol 5:R7
-
(2004)
Genome Biol
, vol.5
-
-
Koonin, E.V.1
Federova, N.D.2
Jackson, J.D.3
-
110
-
-
0012131686
-
High bivalent frequencies in artificial autopolyploids of Hyoscyamus muticus L
-
Lavania UC (1985) High bivalent frequencies in artificial autopolyploids of Hyoscyamus muticus L. Can J Genet Cytol 28:7-11
-
(1985)
Can J Genet Cytol
, vol.28
, pp. 7-11
-
-
Lavania, U.C.1
-
111
-
-
84864609849
-
Autopolyploidy differentially influences body size in plants, but facilitates enhanced accumulation of secondary metabolites, causing increased cytosine methylation
-
Lavania UC, Srivastava S, Lavania S et al (2012) Autopolyploidy differentially influences body size in plants, but facilitates enhanced accumulation of secondary metabolites, causing increased cytosine methylation. Plant J 71:539-549
-
(2012)
Plant J
, vol.71
, pp. 539-549
-
-
Lavania, U.C.1
Srivastava, S.2
Lavania, S.3
-
113
-
-
0035810998
-
Protein-coding genes are epigenetically regulated in Arabidopsis polyploids
-
Lee HS, Chen ZJ (2001) Protein-coding genes are epigenetically regulated in Arabidopsis polyploids. Proc Natl Acad Sci USA 98:6753-6758
-
(2001)
Proc Natl Acad Sci USA
, vol.98
, pp. 6753-6758
-
-
Lee, H.S.1
Chen, Z.J.2
-
114
-
-
0030463036
-
Dosage effects on morphological and quantitative traits in maize aneuploids
-
Lee EA, Darrah LL, Coe EH (1996) Dosage effects on morphological and quantitative traits in maize aneuploids. Genome 39:898-908
-
(1996)
Genome
, vol.39
, pp. 898-908
-
-
Lee, E.A.1
Darrah, L.L.2
Coe, E.H.3
-
115
-
-
0021057690
-
Polyploidy and novelty in flowering plants
-
Levin DA (1983) Polyploidy and novelty in flowering plants. Am Nat 122:1-25
-
(1983)
Am Nat
, vol.122
, pp. 1-25
-
-
Levin, D.A.1
-
117
-
-
0034879460
-
Polyploid formation in cotton is not accompanied by rapid genomic changes
-
DOI 10.1139/gen-44-3-321
-
Liu B, Brubaker C, Mergeai G et al (2001) Polyploid formation in cotton is not accompanied by rapid genomic changes. Genome 44:321-330 (Pubitemid 32752635)
-
(2001)
Genome
, vol.44
, Issue.3
, pp. 321-330
-
-
Liu, B.1
Brubaker, C.L.2
Mergeai, G.3
Cronn, R.C.4
Wendel, J.F.5
-
118
-
-
84981840010
-
Subarctic polyploidy
-
Löve A (1953) Subarctic polyploidy. Hereditas 39:113-124
-
(1953)
Hereditas
, vol.39
, pp. 113-124
-
-
Löve, A.1
-
120
-
-
0034634395
-
The evolutionary fate and consequences of duplicate genes
-
Lynch M, Conery JS (2000) The evolutionary fate and consequences of duplicate genes. Science 290:1151-1155
-
(2000)
Science
, vol.290
, pp. 1151-1155
-
-
Lynch, M.1
Conery, J.S.2
-
121
-
-
84872597340
-
Polyploidy and its effect on evolutionary success: Old questions revisited with new tools
-
Madlung A (2013) Polyploidy and its effect on evolutionary success: old questions revisited with new tools. Heredity 110:99-104
-
(2013)
Heredity
, vol.110
, pp. 99-104
-
-
Madlung, A.1
-
122
-
-
84881177437
-
Genetic and epigenetic aspects of polyploid evolution in plants
-
Madlung A, Wendel JF (2013) Genetic and epigenetic aspects of polyploid evolution in plants. Cytogenet Genome Res 140:270-285
-
(2013)
Cytogenet Genome Res
, vol.140
, pp. 270-285
-
-
Madlung, A.1
Wendel, J.F.2
-
123
-
-
0035984262
-
Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids
-
DOI 10.1104/pp.003095
-
Madlung A, Masuelli RW, Watson B et al (2002) Remodeling of DNA methylation and phenotypic and transcriptional changes in synthetic Arabidopsis allotetraploids. Plant Physiol 129:733-746 (Pubitemid 34689159)
-
(2002)
Plant Physiology
, vol.129
, Issue.2
, pp. 733-746
-
-
Madlung, A.1
Masuelli, R.W.2
Watson, B.3
Reynolds, S.H.4
Davison, J.5
Comai, L.6
-
124
-
-
12844257041
-
Genomic changes in synthetic Arabidopsis polyploids
-
DOI 10.1111/j.1365-313X.2004.02297.x
-
Madlung A, Tyagi AP, Watson B et al (2005) Genomic changes in synthetic Arabidopsis polyploids. Plant J 41:221-230 (Pubitemid 40162248)
-
(2005)
Plant Journal
, vol.41
, Issue.2
, pp. 221-230
-
-
Madlung, A.1
Tyagi, A.P.2
Watson, B.3
Jiang, H.4
Kagochi, T.5
Doerge, R.W.6
Martienssen, R.7
Comai, L.8
-
125
-
-
84855902517
-
Natural variation and persistent developmental instabilities in geographically diverse accessions of the allopolyploid Arabidopsis suecica
-
Madlung A, Henkhaus N, Jurevic L et al (2012) Natural variation and persistent developmental instabilities in geographically diverse accessions of the allopolyploid Arabidopsis suecica. Physiol Plant 144:123-133
-
(2012)
Physiol Plant
, vol.144
, pp. 123-133
-
-
Madlung, A.1
Henkhaus, N.2
Jurevic, L.3
-
126
-
-
17244368487
-
Modeling gene and genome duplications in eukaryotes
-
DOI 10.1073/pnas.0501102102
-
Maere S, De Bodt S, Raes J et al (2005) Modeling gene and genome duplications in eukaryotes. Proc Natl Acad Sci USA 102:5454-5459 (Pubitemid 40530279)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.15
, pp. 5454-5459
-
-
Maere, S.1
De Bodt, S.2
Raes, J.3
Casneuf, T.4
Van Montagu, M.5
Kuiper, M.6
Van De, P.Y.7
-
128
-
-
84862545124
-
Allopolyploidization lays the foundation for evolution of distinct populations: Evidence from analysis of synthetic Arabidopsis allohexaploids
-
Matsushita SC, Tyagi AP, Thornton GM et al (2012) Allopolyploidization lays the foundation for evolution of distinct populations: evidence from analysis of synthetic Arabidopsis allohexaploids. Genetics 191:535-547
-
(2012)
Genetics
, vol.191
, pp. 535-547
-
-
Matsushita, S.C.1
Tyagi, A.P.2
Thornton, G.M.3
-
129
-
-
80052468970
-
Recently formed polyploid plants diversify at lower rates
-
Mayrose I, Zhan SH, Rothfels CJ et al (2011) Recently formed polyploid plants diversify at lower rates. Science 333:1257
-
(2011)
Science
, vol.333
, pp. 1257
-
-
Mayrose, I.1
Zhan, S.H.2
Rothfels, C.J.3
-
130
-
-
0000624696
-
Environmental induction of high frequency 2n pollen formation in diploid Solanum
-
McHale NA (1983) Environmental induction of high frequency 2n pollen formation in diploid Solanum. Can J Genet Cytol 25:609-615
-
(1983)
Can J Genet Cytol
, vol.25
, pp. 609-615
-
-
McHale, N.A.1
-
131
-
-
0036613237
-
Extensive genomic duplication during early chordate evolution
-
McLysaght A, Hokamp K, Wolfe KH (2002) Extensive genomic duplication during early chordate evolution. Nat Genet 31:200-204
-
(2002)
Nat Genet
, vol.31
, pp. 200-204
-
-
McLysaght, A.1
Hokamp, K.2
Wolfe, K.H.3
-
132
-
-
33846476202
-
The road to crossovers: Plants have their say
-
DOI 10.1016/j.tig.2006.12.007, PII S0168952506004112
-
Mézard C, Vignard J, Drouaud J, Mercier R (2007) The road to crossovers: plants have their say. Trends Genet 23:91-99 (Pubitemid 46161218)
-
(2007)
Trends in Genetics
, vol.23
, Issue.2
, pp. 91-99
-
-
Mezard, C.1
Vignard, J.2
Drouaud, J.3
Mercier, R.4
-
133
-
-
0029901735
-
A change of ploidy can modify epigenetic silencing
-
DOI 10.1073/pnas.93.14.7114
-
Mittelsten Scheid O, Jakovleva L, Afsar K et al (1996) A change of ploidy can modify epigenetic silencing. Proc Natl Acad Sci USA 93:7114-7119 (Pubitemid 26243511)
-
(1996)
Proceedings of the National Academy of Sciences of the United States of America
, vol.93
, Issue.14
, pp. 7114-7119
-
-
Scheid, O.M.1
Jakovleva, L.2
Afsar, K.3
Maluszynska, J.4
Paszkowski, J.5
-
134
-
-
0029174032
-
Allopolyploid origin of Arabidopsis suecica (Fries) Norrlin: Evidence from chloroplast and nuclear genome markers
-
Mummenhoff K, Hurka H (1995) Allopolyploid origin of Arabidopsis suecica (Fries) Norrlin: evidence from chloroplast and nuclear genome markers. Bot Acta 108:449-456 (Pubitemid 3000504)
-
(1995)
Botanica Acta
, vol.108
, Issue.5
, pp. 449-456
-
-
Mummenhoff, K.1
Hurka, H.2
-
135
-
-
0021164926
-
Further evidence for the presence of meiotic pairing control genes in Alopecurus L. (Gramineae)
-
Murray BG, Sieber VK, Jackson RC (1984) Further evidence for the presence of meiotic pairing control genes in Alopecurus L. (Gramineae). Genetica 63:13-19
-
(1984)
Genetica
, vol.63
, pp. 13-19
-
-
Murray, B.G.1
Sieber, V.K.2
Jackson, R.C.3
-
136
-
-
0000017694
-
Meiosis in autotetraploid Lolium perenne in relation to chromosomal behavior in autopolyploids
-
Myers WM (1945) Meiosis in autotetraploid Lolium perenne in relation to chromosomal behavior in autopolyploids. Bot Gaz 106:304-316
-
(1945)
Bot Gaz
, vol.106
, pp. 304-316
-
-
Myers, W.M.1
-
137
-
-
0031710819
-
Effect of selection and temperature stress on the production of 2n gametes in Lotus tenuis
-
Negri V, Lemmi G (1998) Effect of selection and temperature stress on the production of 2 n gametes in. Lotus tenuis. Plant Breed 117:345-349 (Pubitemid 28445534)
-
(1998)
Plant Breeding
, vol.117
, Issue.4
, pp. 345-349
-
-
Negri, V.1
Lemmi, G.2
-
138
-
-
0141991410
-
The origins of Arabidopsis suecica (Brassicaceae) as indicated by nuclear rDNA sequences
-
O'Kane SRJ, Schaal BA, Al-Shehbaz IA (1996) The origins of Arabidopsis suecica (Brassicaceae) as indicated by nuclear rDNA sequences. Syst Bot 21:559-566
-
(1996)
Syst Bot
, vol.21
, pp. 559-566
-
-
O'Kane, S.R.J.1
Schaal, B.A.2
Al-Shehbaz, I.A.3
-
139
-
-
81355163491
-
A unified model of autopolyploid establishment and evolution
-
Oswald BP, Nuismer SL (2011) A unified model of autopolyploid establishment and evolution. Am Nat 178:687-700
-
(2011)
Am Nat
, vol.178
, pp. 687-700
-
-
Oswald, B.P.1
Nuismer, S.L.2
-
140
-
-
0034500239
-
Polyploid incidence and evolution
-
DOI 10.1146/annurev.genet.34.1.401
-
Otto S, Whitton J (2000) Polyploid incidence and evolution. Annu Rev Genet 34:401-437 (Pubitemid 32065927)
-
(2000)
Annual Review of Genetics
, vol.34
, pp. 401-437
-
-
Otto, S.P.1
Whitton, J.2
-
141
-
-
33744464261
-
No DNA loss in autotetraploids of Arabidopsis thaliana
-
DOI 10.1111/j.1439-0523.2006.01211.x
-
Ozkan H, Tuna M, Galbraith DW (2006) No DNA loss in autotetraploids of Arabidopsis thaliana. Plant Breed 125:288-291 (Pubitemid 43807311)
-
(2006)
Plant Breeding
, vol.125
, Issue.3
, pp. 288-291
-
-
Ozkan, H.1
Tuna, M.2
Galbraith, D.W.3
-
142
-
-
0038157152
-
Dosage sensitivity and the evolution of gene families in yeast
-
DOI 10.1038/nature01771
-
Papp B, Pál C, Hurst LD (2003) Dosage sensitivity and the evolution of gene families in yeast. Nature 424:194-197 (Pubitemid 36858686)
-
(2003)
Nature
, vol.424
, Issue.6945
, pp. 194-197
-
-
Papp, B.1
Pal, C.2
Hurst, L.D.3
-
143
-
-
70449341719
-
Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina
-
Parisod C, Salmon A, Zerjal T et al (2009) Rapid structural and epigenetic reorganization near transposable elements in hybrid and allopolyploid genomes in Spartina. New Phytol 184:1003-1015
-
(2009)
New Phytol
, vol.184
, pp. 1003-1015
-
-
Parisod, C.1
Salmon, A.2
Zerjal, T.3
-
144
-
-
77950959077
-
Impact of transposable elements on the organization and function of allopolyploid genomes
-
Parisod C, Alix K, Just J et al (2010) Impact of transposable elements on the organization and function of allopolyploid genomes. New Phytol 186:37-45
-
(2010)
New Phytol
, vol.186
, pp. 37-45
-
-
Parisod, C.1
Alix, K.2
Just, J.3
-
145
-
-
16344386197
-
Polyploidy, evolutionary opportunity, and crop adaptation
-
Paterson A (2005) Polyploidy, evolutionary opportunity, and crop adaptation. Genetica 123:191-196
-
(2005)
Genetica
, vol.123
, pp. 191-196
-
-
Paterson, A.1
-
146
-
-
33750173564
-
Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon
-
DOI 10.1016/j.tig.2006.09.003, PII S0168952506002964
-
Paterson AH, Chapman BA, Kissinger JC, Bowers JE, Feltus FA, Estill JC (2006) Many gene and domain families have convergent fates following independent whole-genome duplication events in Arabidopsis, Oryza, Saccharomyces and Tetraodon. Trends Genet 22:597-602 (Pubitemid 44602267)
-
(2006)
Trends in Genetics
, vol.22
, Issue.11
, pp. 597-602
-
-
Paterson, A.H.1
Chapman, B.A.2
Kissinger, J.C.3
Bowers, J.E.4
Feltus, F.A.5
Estill, J.C.6
-
147
-
-
79954624560
-
Polyploidization increases meiotic recombination frequency in Arabidopsis
-
Pecinka A, Fang W, Rehmsmeier M et al (2011) Polyploidization increases meiotic recombination frequency in Arabidopsis. BMC Biol 9:24
-
(2011)
BMC Biol
, vol.9
, pp. 24
-
-
Pecinka, A.1
Fang, W.2
Rehmsmeier, M.3
-
148
-
-
79960249714
-
Polyploidization mechanisms: Temperature environment can induce diploid gamete formation in Rosa sp
-
Pécrix Y, Rallo G, Folzer H, Cigna M, Gudin S, Le Bris M (2011) Polyploidization mechanisms: temperature environment can induce diploid gamete formation in Rosa sp. J Exp Bot 62:3587-3597
-
(2011)
J Exp Bot
, vol.62
, pp. 3587-3597
-
-
Pécrix, Y.1
Rallo, G.2
Folzer, H.3
Cigna, M.4
Gudin, S.5
Le Bris, M.6
-
149
-
-
77950939119
-
Mobilization of retrotransposons in synthetic allotetraploid tobacco
-
Petit M, Guidat C, Daniel J et al (2010) Mobilization of retrotransposons in synthetic allotetraploid tobacco. New Phytol 186:135-147
-
(2010)
New Phytol
, vol.186
, pp. 135-147
-
-
Petit, M.1
Guidat, C.2
Daniel, J.3
-
150
-
-
77950938195
-
Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling
-
Pignatta D, Dilkes BP, Yoo SYet al (2010) Differential sensitivity of the Arabidopsis thaliana transcriptome and enhancers to the effects of genome doubling. New Phytol 186:194-206
-
(2010)
New Phytol
, vol.186
, pp. 194-206
-
-
Pignatta, D.1
Dilkes, B.P.2
Yoo, S.Y.3
-
151
-
-
0032696747
-
Nucleolar dominance and silencing of transcription
-
Pikaard CS (1999) Nucleolar dominance and silencing of transcription. Trends Plant Sci 4:478-483
-
(1999)
Trends Plant Sci
, vol.4
, pp. 478-483
-
-
Pikaard, C.S.1
-
152
-
-
0346091243
-
Flowering time divergence and genomic rearrangements in resynthesized Brassica polyploids (Brassicaceae)
-
DOI 10.1111/j.1095-8312.2004.00350.x
-
Pires JC, Zhao JW, Schranz ME et al (2004) Flowering time divergence and genomic rearrangements in resynthesized Brassica polyploids (Brassicaceae). Biol J Linn Soc 82:675-688 (Pubitemid 39123353)
-
(2004)
Biological Journal of the Linnean Society
, vol.82
, Issue.4
, pp. 675-688
-
-
Pires, J.C.1
Zhao, J.2
Schranz, M.E.3
Leon, E.J.4
Quijada, P.A.5
Lukens, L.N.6
Osborn, T.C.7
-
153
-
-
0346022645
-
Cytotaxonomische Beiträge zur Flora der Ostalpenländer, I
-
Polatschek A (1965) Cytotaxonomische Beiträge zur Flora der Ostalpenländer, I. Öterr Botan Zeitschrifft 113:1-46
-
(1965)
Öterr Botan Zeitschrifft
, vol.113
, pp. 1-46
-
-
Polatschek, A.1
-
154
-
-
11144224315
-
Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome
-
DOI 10.1073/pnas.0407258102
-
Pontes O, Neves N, Silva M et al (2004) Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome. Proc Natl Acad Sci USA 101:18240-18245 (Pubitemid 40054104)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.52
, pp. 18240-18245
-
-
Pontes, O.1
Neves, N.2
Silva, M.3
Lewis, M.S.4
Madlung, A.5
Comai, L.6
Viegas, W.7
Pikaard, C.S.8
-
155
-
-
84860521732
-
Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis
-
Pontvianne F, Blevins T, Chandrasekhara C et al (2012) Histone methyltransferases regulating rRNA gene dose and dosage control in Arabidopsis. Genes Dev 26:945-957
-
(2012)
Genes Dev
, vol.26
, pp. 945-957
-
-
Pontvianne, F.1
Blevins, T.2
Chandrasekhara, C.3
-
156
-
-
56849085532
-
Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins
-
Preuss SB, Costa-Nunes P, Tucker S et al (2008) Multimegabase silencing in nucleolar dominance involves siRNA-directed DNA methylation and specific methylcytosine-binding proteins. Mol Cell 32:673-684
-
(2008)
Mol Cell
, vol.32
, pp. 673-684
-
-
Preuss, S.B.1
Costa-Nunes, P.2
Tucker, S.3
-
157
-
-
0032422925
-
Pathways, mechanisms, and rates of polyploid formation in flowering plants
-
DOI 10.1146/annurev.ecolsys.29.1.467
-
Ramsey J, Schemske DW (1998) Pathways, mechanisms, and rates of polyploid formation in flowering plants. Annu Rev Ecol Syst 29:467-501 (Pubitemid 29033040)
-
(1998)
Annual Review of Ecology and Systematics
, vol.29
, pp. 467-501
-
-
Ramsey, J.1
Schemske, D.W.2
-
159
-
-
66149174929
-
Genomic expression dominance in allopolyploids
-
Rapp R, Udall J, Wendel J (2009) Genomic expression dominance in allopolyploids. BMC Biol 7:18
-
(2009)
BMC Biol
, vol.7
, pp. 18
-
-
Rapp, R.1
Udall, J.2
Wendel, J.3
-
160
-
-
33751249024
-
Genetic variation for the response to ploidy change in Zea mays L.
-
DOI 10.1007/s00122-006-0414-z
-
Riddle NC, Kato A, Birchler J (2006) Genetic variation for the response to ploidy change in Zea mays L. Theor Appl Genet 114:101-111 (Pubitemid 44786539)
-
(2006)
Theoretical and Applied Genetics
, vol.114
, Issue.1
, pp. 101-111
-
-
Riddle, N.C.1
Kato, A.2
Birchler, J.A.3
-
161
-
-
75849147404
-
Gene expression analysis at the intersection of ploidy and hybridity in maize
-
Riddle N, Jang H, An L, Doerge RW, Birchler JA (2010) Gene expression analysis at the intersection of ploidy and hybridity in maize. Theor Appl Genet 120:341-353
-
(2010)
Theor Appl Genet
, vol.120
, pp. 341-353
-
-
Riddle, N.1
Jang, H.2
An, L.3
Doerge, R.W.4
Birchler, J.A.5
-
162
-
-
34548139429
-
Plant speciation
-
DOI 10.1126/science.1137729
-
Rieseberg LH, Willis JH (2007) Plant speciation. Science 317:910-914 (Pubitemid 47301311)
-
(2007)
Science
, vol.317
, Issue.5840
, pp. 910-914
-
-
Rieseberg, L.H.1
Willis, J.H.2
-
163
-
-
48749130911
-
Patterns of polymorphism and demographic history in natural populations of Arabidopsis lyrata
-
Ross-Ibarra J, Wright SI, Foxe JP et al (2008) Patterns of polymorphism and demographic history in natural populations of Arabidopsis lyrata. PLoS One 3:e2411
-
(2008)
PLoS One
, vol.3
-
-
Ross-Ibarra, J.1
Wright, S.I.2
Foxe, J.P.3
-
164
-
-
34548402100
-
ASY1 mediates AtDMC1-dependent interhomolog recombination during meiosis in Arabidopsis
-
DOI 10.1101/gad.439007
-
Sanchez-Moran E, Santos JL, Jones GH, Franklin FCH (2007) ASY1 mediates AtDMC1-dependent interhomolog recombination during meiosis in Arabidopsis. Genes Dev 21:2220-2233 (Pubitemid 47360843)
-
(2007)
Genes and Development
, vol.21
, Issue.17
, pp. 2220-2233
-
-
Sanchez-Moran, E.1
Santos, J.-L.2
Jones, G.H.3
Franklin, F.C.H.4
-
165
-
-
0347622763
-
Partial Diploidization of Meiosis in Autotetraploid Arabidopsis thaliana
-
Santos JL, Alfaro D, Sanchez-Moran E, Armstrong SJ, Franklin FCH, Jones GH (2003) Partial diploidization of meiosis in autotetraploid Arabidopsis thaliana. Genetics 165:1533-1540 (Pubitemid 38020267)
-
(2003)
Genetics
, vol.165
, Issue.3
, pp. 1533-1540
-
-
Santos, J.L.1
Alfaro, D.2
Sanchez-Moran, E.3
Armstrong, S.J.4
Franklin, F.C.H.5
Jones, G.H.6
-
166
-
-
80052159306
-
Arabidopsis hybrid speciation processes
-
Schmickl R, Koch MA (2011) Arabidopsis hybrid speciation processes. Proc Natl Acad Sci USA 108:14192-14197
-
(2011)
Proc Natl Acad Sci USA
, vol.108
, pp. 14192-14197
-
-
Schmickl, R.1
Koch, M.A.2
-
167
-
-
77950664138
-
The evolutionary history of the Arabidopsis lyrata complex: A hybrid in the amphi-Beringian area closes a large distribution gap and builds up a genetic barrier
-
Schmickl R, Jørgensen MH, Brysting AK, Koch MA (2010) The evolutionary history of the Arabidopsis lyrata complex: a hybrid in the amphi-Beringian area closes a large distribution gap and builds up a genetic barrier. BMC Evol Biol 10:98
-
(2010)
BMC Evol Biol
, vol.10
, pp. 98
-
-
Schmickl, R.1
Jørgensen, M.H.2
Brysting, A.K.3
Koch, M.A.4
-
168
-
-
84864561203
-
The evolutionary history of the Arabidopsis arenosa complex: Diverse tetraploids mask the Western Carpathian center of species and genetic diversity
-
Schmickl R, Paule J, Klein J et al (2012) The evolutionary history of the Arabidopsis arenosa complex: diverse tetraploids mask the Western Carpathian center of species and genetic diversity. PLoS One 7:e42691
-
(2012)
PLoS One
, vol.7
-
-
Schmickl, R.1
Paule, J.2
Klein, J.3
-
169
-
-
2542487363
-
Genome size variation among accessions of Arabidopsis thaliana
-
DOI 10.1093/aob/mch037
-
Schmuths H, Meister A, Horres R, Bachmann K (2004) Genome size variation among accessions of Arabidopsis thaliana. Ann Bot Lond 93:317-321 (Pubitemid 41295625)
-
(2004)
Annals of Botany
, vol.93
, Issue.3
, pp. 317-321
-
-
Schmuths, H.1
Meister, A.2
Horres, R.3
Bachmann, K.4
-
170
-
-
84905112644
-
Nomenklatorische und systematische Studien an Cardaminopsis arenosa (L.) Hayek
-
Scholz H (1962) Nomenklatorische und systematische Studien an Cardaminopsis arenosa (L.) Hayek. Willdenowia 3:137-149
-
(1962)
Willdenowia
, vol.3
, pp. 137-149
-
-
Scholz, H.1
-
171
-
-
36549038087
-
Consequences of genome duplication
-
DOI 10.1016/j.gde.2007.09.007, PII S0959437X07001724, Genomes and Evolution
-
Sémon M, Wolfe KM (2007) Consequences of genome duplication. Curr Op Genet Dev 17:505-512 (Pubitemid 350186344)
-
(2007)
Current Opinion in Genetics and Development
, vol.17
, Issue.6
, pp. 505-512
-
-
Semon, M.1
Wolfe, K.H.2
-
172
-
-
0034866855
-
Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat
-
DOI 10.1105/tpc.13.8.1749
-
Shaked H, Kashkush K, Ozkan H et al (2001) Sequence elimination and cytosine methylation are rapid and reproducible responses of the genome to wide hybridization and allopolyploidy in wheat. Plant Cell 13:1749-1759 (Pubitemid 32781988)
-
(2001)
Plant Cell
, vol.13
, Issue.8
, pp. 1749-1759
-
-
Shaked, H.1
Kashkush, K.2
Ozkan, H.3
Feldman, M.4
Levy, A.A.5
-
174
-
-
33646430086
-
Arabidopsis kamchatica (Fisch. ex DC.) K. Shimizu & Kudoh and A. kamchatica subsp. kawasakiana (Makino) K. Shimizu & Kudoh, New combinations
-
Shimizu KK, Fujii S, Marhold K et al (2005) Arabidopsis kamchatica (Fisch. ex DC.) K. Shimizu & Kudoh and A. kamchatica subsp. kawasakiana (Makino) K. Shimizu & Kudoh, New combinations. Acta Phytotaxon Geobot 56:163-172
-
(2005)
Acta Phytotaxon Geobot
, vol.56
, pp. 163-172
-
-
Shimizu, K.K.1
Fujii, S.2
Marhold, K.3
-
175
-
-
70349330953
-
The allopolyploid Arabidopsis kamchatica originated from multiple individuals of Arabidopsis lyrata and Arabidopsis halleri
-
Shimizu-Inatsugi R, Lihová J, Iwanaga H et al (2009) The allopolyploid Arabidopsis kamchatica originated from multiple individuals of Arabidopsis lyrata and Arabidopsis halleri. Mol Ecol 18:4024-4048
-
(2009)
Mol Ecol
, vol.18
, pp. 4024-4048
-
-
Shimizu-Inatsugi, R.1
Lihová, J.2
Iwanaga, H.3
-
176
-
-
84868103798
-
New Insights into the troubles of aneuploidy
-
Siegel JJ, Amon A (2012) New Insights into the troubles of aneuploidy. Annu Rev Cell Dev Biol 28:189-214
-
(2012)
Annu Rev Cell Dev Biol
, vol.28
, pp. 189-214
-
-
Siegel, J.J.1
Amon, A.2
-
177
-
-
0037109058
-
The hidden duplication past of Arabidopsis thaliana
-
DOI 10.1073/pnas.212522399
-
Simillion C, Vandepoele K, Van Montagu MC, Zabeau M, Van de Peer Y (2002) The hidden duplication past of Arabidopsis thaliana. Proc Natl Acad Sci USA 99:13627-13632 (Pubitemid 35215431)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.21
, pp. 13627-13632
-
-
Simillion, C.1
Vandepoele, K.2
Van Montagu, M.C.E.3
Zabeau, M.4
Van De, P.Y.5
-
178
-
-
0347388384
-
Advances in the study of polyploidy since Plant speciation
-
Soltis DE, Soltis PS, Tate JA (2003) Advances in the study of polyploidy since Plant speciation. New Phytol 161:173-191
-
(2003)
New Phytol
, vol.161
, pp. 173-191
-
-
Soltis, D.E.1
Soltis, P.S.2
Tate, J.A.3
-
179
-
-
33947673002
-
Autopolyploidy in angiosperms: Have we grossly underestimated the number of species?
-
Soltis DE, Soltis PS, Schemske DW et al (2007) Autopolyploidy in angiosperms: have we grossly underestimated the number of species? Taxon 56:13-30 (Pubitemid 46492436)
-
(2007)
Taxon
, vol.56
, Issue.1
, pp. 13-30
-
-
Soltis, D.E.1
Soltis, P.S.2
Schemske, D.W.3
Hancock, J.F.4
Thompson, J.N.5
Husband, B.C.6
Judd, W.S.7
-
180
-
-
0029162810
-
Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution
-
Song K, Lu P, Tang K, Osborn TC (1995) Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc Natl Acad Sci USA 92:7719-7723
-
(1995)
Proc Natl Acad Sci USA
, vol.92
, pp. 7719-7723
-
-
Song, K.1
Lu, P.2
Tang, K.3
Osborn, T.C.4
-
181
-
-
84966168235
-
Genetic variation in meiotic behavior and fertility in tetraploid Hyoscyamus muticus: Correlation with diploid meiosis
-
Srivastava S, Lavania UC, Sybenga J (1992) Genetic variation in meiotic behavior and fertility in tetraploid Hyoscyamus muticus: correlation with diploid meiosis. Heredity 68:231-239
-
(1992)
Heredity
, vol.68
, pp. 231-239
-
-
Srivastava, S.1
Lavania, U.C.2
Sybenga, J.3
-
182
-
-
0029863401
-
Localized chiasmata and meiotic nodules in the tetraploid onion Allium porrum
-
Stack SM, Roelofs D (1996) Localized chiasmata and meiotic nodules in the tetraploid onion Allium porrum. Genome 39:770-783 (Pubitemid 26369472)
-
(1996)
Genome
, vol.39
, Issue.4
, pp. 770-783
-
-
Stack, S.M.1
Roelofs, D.2
-
183
-
-
0007631972
-
The significance of polyploidy in plant evolution
-
Stebbins GL (1940) The significance of polyploidy in plant evolution. Am Nat 74:54-66
-
(1940)
Am Nat
, vol.74
, pp. 54-66
-
-
Stebbins, G.L.1
-
185
-
-
0037494213
-
Chromosome studies in Arabidopsis thaliana
-
Steinitz-Sears LM (1963) Chromosome studies in Arabidopsis thaliana. Genetics 48:483-490
-
(1963)
Genetics
, vol.48
, pp. 483-490
-
-
Steinitz-Sears, L.M.1
-
186
-
-
33749506269
-
Genome-wide genetic analysis of polyploidy in yeast
-
DOI 10.1038/nature05178, PII NATURE05178
-
Storchova Z, Breneman A, Cande J et al (2006) Genome-wide genetic analysis of polyploidy in yeast. Nature 443:541-547 (Pubitemid 44527285)
-
(2006)
Nature
, vol.443
, Issue.7111
, pp. 541-547
-
-
Storchova, Z.1
Breneman, A.2
Cande, J.3
Dunn, J.4
Burbank, K.5
O'Toole, E.6
Pellman, D.7
-
187
-
-
34548379504
-
Phenotypic and transcriptomic changes associated with potato autopolyploidization
-
DOI 10.1534/genetics.107.074286
-
Stupar RM, Bhaskar PB, Yandell BS et al (2007) Phenotypic and transcriptomic changes associated with potato autopolyploidization. Genetics 176:2055-2067 (Pubitemid 47360641)
-
(2007)
Genetics
, vol.176
, Issue.4
, pp. 2055-2067
-
-
Stupar, R.M.1
Bhaskar, P.B.2
Yandell, B.S.3
Rensink, W.A.4
Hart, A.L.5
Ouyang, S.6
Veilleux, R.E.7
Busse, J.S.8
Erhardt, R.J.9
Buell, C.R.10
Jiang, J.11
-
188
-
-
0012164662
-
Allopolyploidization of autopolyploids 2. Manipulation of the chromosome pairing system
-
Sybenga J (1973) Allopolyploidization of autopolyploids 2. Manipulation of the chromosome pairing system. Euphytica 22:433-444
-
(1973)
Euphytica
, vol.22
, pp. 433-444
-
-
Sybenga, J.1
-
189
-
-
33745617700
-
Following tetraploidy in an Arabidopsis ancestor, genes were removed preferentially from one homeolog leaving clusters enriched in dose-sensitive genes
-
DOI 10.1101/gr.4708406
-
Thomas BC, Pedersen B, Freeling M (2006) Following tetraploidy in an Arabidopsis ancestor, genes were enriched in dose-sensitive genes removed preferentially from one homeolog leaving clusters. Genome Res 16:934-946 (Pubitemid 43992917)
-
(2006)
Genome Research
, vol.16
, Issue.7
, pp. 934-946
-
-
Thomas, B.C.1
Pedersen, B.2
Freeling, M.3
-
190
-
-
0034671866
-
The origins of genomic duplications in Arabidopsis
-
DOI 10.1126/science.290.5499.2114
-
Vision TJ, Brown DG, Tanksley SD (2000) The origins of genomic duplications in Arabidopsis. Science 290:2114-2117 (Pubitemid 32001585)
-
(2000)
Science
, vol.290
, Issue.5499
, pp. 2114-2117
-
-
Vision, T.J.1
Brown, D.G.2
Tanksley, S.D.3
-
191
-
-
67649884531
-
Dosage-dependent deregulation of an AGAMOUS-LIKE gene cluster contributes to interspecific incompatibility
-
Walia H, Josefsson C, Dilkes B et al (2009) Dosage-dependent deregulation of an AGAMOUS-LIKE gene cluster contributes to interspecific incompatibility. Curr Biol 19:1128-1132
-
(2009)
Curr Biol
, vol.19
, pp. 1128-1132
-
-
Walia, H.1
Josefsson, C.2
Dilkes, B.3
-
192
-
-
4344642732
-
Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids
-
DOI 10.1534/genetics.104.027896
-
Wang J, Tian L, Madlung A et al (2004) Stochastic and epigenetic changes of gene expression in Arabidopsis polyploids. Genetics 167:1961-1973 (Pubitemid 39265930)
-
(2004)
Genetics
, vol.167
, Issue.4
, pp. 1961-1973
-
-
Wang, J.1
Tian, L.2
Madlung, A.3
Lee, H.-S.4
Chen, M.5
Lee, J.J.6
Watson, B.7
Kagochi, T.8
Comai, L.9
Chen, Z.J.10
-
193
-
-
33644762929
-
Genomewide nonadditive gene regulation in arabidopsis allotetraploids
-
DOI 10.1534/genetics.105.047894
-
Wang J, Tian L, Lee HS et al (2006) Genomewide nonadditive gene regulation in Arabidopsis allotetraploids. Genetics 172:507-517 (Pubitemid 43345511)
-
(2006)
Genetics
, vol.172
, Issue.1
, pp. 507-517
-
-
Wang, J.1
Tian, L.2
Lee, H.-S.3
Wei, N.E.4
Jiang, H.5
Watson, B.6
Madlung, A.7
Osborn, T.C.8
Doerge, R.W.9
Comai, L.10
Chen, Z.J.11
-
194
-
-
77957143178
-
Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: Evidence of genome-wide admixture
-
Wang W-K, Ho C-W, Hung K-H et al (2010) Multilocus analysis of genetic divergence between outcrossing Arabidopsis species: evidence of genome-wide admixture. New Phytol 188:488-500
-
(2010)
New Phytol
, vol.188
, pp. 488-500
-
-
Wang, W.-K.1
Ho, C.-W.2
Hung, K.-H.3
-
195
-
-
84885934554
-
Physiological and proteomic responses of diploid and tetraploid black locust (Robinia pseudoacacia L.) subjected to salt stress
-
Wang Z, Wang M, Liu L, Meng F (2013) Physiological and proteomic responses of diploid and tetraploid black locust (Robinia pseudoacacia L.) subjected to salt stress. Int J Mol Sci 14:20299-20325
-
(2013)
Int J Mol Sci
, vol.14
, pp. 20299-20325
-
-
Wang, Z.1
Wang, M.2
Liu, L.3
Meng, F.4
-
196
-
-
79953324603
-
Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi
-
Waterhouse RM, Zdobnov EM, Kriventseva EV (2011) Correlating traits of gene retention, sequence divergence, duplicability and essentiality in vertebrates, arthropods, and fungi. Genome Biol Evol 3:75-86
-
(2011)
Genome Biol Evol
, vol.3
, pp. 75-86
-
-
Waterhouse, R.M.1
Zdobnov, E.M.2
Kriventseva, E.V.3
-
197
-
-
0034438729
-
Chromosomal rearrangement in autotetraploid plants of Arabidopsis thaliana
-
Weiss H, Maluszynska J (2000) Chromosomal rearrangement in autotetraploid plants of Arabidopsis thaliana. Hereditas 133:255-261 (Pubitemid 32519557)
-
(2000)
Hereditas
, vol.133
, Issue.3
, pp. 255-261
-
-
Weiss, H.1
Maluszynska, J.2
-
198
-
-
0002462042
-
Tetrasomic inheritance and chromosome pairing behavior in the naturally occurring autotetraploid Heuchera grossulariifolia (Saxifragaceae)
-
Wolf PG, Soltis PS, Soltis DE (1989) Tetrasomic inheritance and chromosome pairing behavior in the naturally occurring autotetraploid Heuchera grossulariifolia (Saxifragaceae). Genome 32:655-659
-
(1989)
Genome
, vol.32
, pp. 655-659
-
-
Wolf, P.G.1
Soltis, P.S.2
Soltis, D.E.3
-
199
-
-
70349694563
-
Mitotic instability in resynthesized and natural polyploids of the genus Arabidopsis (Brassicaceae)
-
Wright KM, Pires JC, Madlung A (2009) Mitotic instability in resynthesized and natural polyploids of the genus Arabidopsis (Brassicaceae). Am J Bot 96:1656-1664
-
(2009)
Am J Bot
, vol.96
, pp. 1656-1664
-
-
Wright, K.M.1
Pires, J.C.2
Madlung, A.3
-
200
-
-
85027935426
-
Meiotic adaptation to genome duplication in Arabidopsis arenosa
-
Yant L, Hollister JD, Wright KM et al (2013) Meiotic adaptation to genome duplication in Arabidopsis arenosa. Curr Biol 23:2151-2156
-
(2013)
Curr Biol
, vol.23
, pp. 2151-2156
-
-
Yant, L.1
Hollister, J.D.2
Wright, K.M.3
-
201
-
-
64249144087
-
A large number of tetraploid Arabidopsis thaliana lines, generated by a rapid strategy, reveal high stability of neo-tetraploids during consecutive generations
-
Yu Z, Haage K, Streit VE et al (2009) A large number of tetraploid Arabidopsis thaliana lines, generated by a rapid strategy, reveal high stability of neo-tetraploids during consecutive generations. Theor Appl Genet 118:1107-1119
-
(2009)
Theor Appl Genet
, vol.118
, pp. 1107-1119
-
-
Yu, Z.1
Haage, K.2
Streit, V.E.3
-
202
-
-
78049318554
-
Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana
-
Yu Z, Haberer G, Matthes M et al (2010) Impact of natural genetic variation on the transcriptome of autotetraploid Arabidopsis thaliana. Proc Natl Acad Sci USA 107:17809-17814
-
(2010)
Proc Natl Acad Sci USA
, vol.107
, pp. 17809-17814
-
-
Yu, Z.1
Haberer, G.2
Matthes, M.3
|