-
2
-
-
0033555906
-
Tandem repeats finder: A program to analyse DNA sequences
-
Benson, G. 1999. Tandem repeats finder: a program to analyse DNA sequences. Nucleic Acids Res. 27:573-580.
-
(1999)
Nucleic Acids Res.
, vol.27
, pp. 573-580
-
-
Benson, G.1
-
3
-
-
0036964474
-
Approximate Bayesian computation in population genetics
-
Beaumont, M. A., W. Y. Zhang, and D. J. Balding. 2002. Approximate Bayesian computation in population genetics. Genetics 162:2025-2035.
-
(2002)
Genetics
, vol.162
, pp. 2025-2035
-
-
Beaumont, M.A.1
Zhang, W.Y.2
Balding, D.J.3
-
4
-
-
13044270399
-
Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids
-
USA
-
Chen, Z. J., L. Comai, and C. S. Pikaard. 1998. Gene dosage and stochastic effects determine the severity and direction of uniparental ribosomal RNA gene silencing (nucleolar dominance) in Arabidopsis allopolyploids. Proc. Natl. Acad. Sci. USA 95:14891-14896.
-
(1998)
Proc. Natl. Acad. Sci.
, vol.95
, pp. 14891-14896
-
-
Chen, Z.J.1
Comai, L.2
Pikaard, C.S.3
-
5
-
-
0033789617
-
Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids
-
Comai, L., A. Tyagi, K. Winter, S. Holmes-Davis, R. Reynolds, Y. Stevens, and B. Byers. 2000. Phenotypic instability and rapid gene silencing in newly formed Arabidopsis allotetraploids. Plant Cell 12:1551-1567.
-
(2000)
Plant Cell
, vol.12
, pp. 1551-1567
-
-
Comai, L.1
Tyagi, A.2
Winter, K.3
Holmes-Davis, S.4
Reynolds, R.5
Stevens, Y.6
Byers, B.7
-
6
-
-
0036263045
-
Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana
-
Hagenblad, J., and M. Nordborg. 2002. Sequence variation and haplotype structure surrounding the flowering time locus FRI in Arabidopsis thaliana. Genetics 161:289-298.
-
(2002)
Genetics
, vol.161
, pp. 289-298
-
-
Hagenblad, J.1
Nordborg, M.2
-
7
-
-
10844255772
-
Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci
-
Hagenblad J., C. L. Tang, J. Molitor, J. Werner, K. Zhao, H. G. Zheng, P. Marjoram, D. Weigel, and M. Nordborg. 2004. Haplotype structure and phenotypic associations in the chromosomal regions surrounding two Arabidopsis thaliana flowering time loci. Genetics 168:1627-1638.
-
(2004)
Genetics
, vol.168
, pp. 1627-1638
-
-
Hagenblad, J.1
Tang, C.L.2
Molitor, J.3
Werner, J.4
Zhao, K.5
Zheng, H.G.6
Marjoram, P.7
Weigel, D.8
Nordborg, M.9
-
8
-
-
0036935573
-
Molecular systematics of the New Zealand Pachycladon (Brassicaceae) complex: Generic circumscription and relationships to Arabidopsis sens. lat. and Arabis sens. lat.
-
Heenan, P. B., A. D. Mitchell, and M. Koch. 2002. Molecular systematics of the New Zealand Pachycladon (Brassicaceae) complex: generic circumscription and relationships to Arabidopsis sens. lat. and Arabis sens. lat. N. Z. J. Bot. 40:543-562.
-
(2002)
N. Z. J. Bot.
, vol.40
, pp. 543-562
-
-
Heenan, P.B.1
Mitchell, A.D.2
Koch, M.3
-
9
-
-
22744459171
-
On the number of new world founders: A population genetic portrait of the peopling of the Americas
-
Hey, J. 2005. On the number of new world founders: a population genetic portrait of the peopling of the Americas. PLoS Biol. 3:965-975.
-
(2005)
PLoS Biol.
, vol.3
, pp. 965-975
-
-
Hey, J.1
-
10
-
-
0037975931
-
Parnassia palustris L. in Scandinavia
-
Hultgård, U. 1987. Parnassia palustris L. in Scandinavia. Symb. Bot. Ups. 28:1-128.
-
(1987)
Symb. Bot. Ups.
, vol.28
, pp. 1-128
-
-
Hultgård, U.1
-
12
-
-
0000227006
-
Cardaminopsis suecica (Fr.) Hiit., a northern amphidiploid species
-
Hylander, N. 1957. Cardaminopsis suecica (Fr.) Hiit., a northern amphidiploid species. Bull. Jard. Bot. Brux. 27:591-604.
-
(1957)
Bull. Jard. Bot. Brux.
, vol.27
, pp. 591-604
-
-
Hylander, N.1
-
13
-
-
84858899203
-
-
Doctoral dissertation (M. Jakobsson), Lund University, Lund, Sweden
-
Jakobsson, M., T. Säll, C. Lind-Halldén, and C. Halldén. 2005. The evolutionary history of the common chloroplast genome of Arabidopsis thaliana and A. suecica. in Genome Divergence in Progress apopulation genetic analysis of the allopolyploid Arabidopsis suecica and its maternal parent A. thaliana. Doctoral dissertation (M. Jakobsson), Lund University, Lund, Sweden.
-
(2005)
The Evolutionary History of the Common Chloroplast Genome of Arabidopsis Thaliana and A. Suecica. in Genome Divergence in Progress Apopulation Genetic Analysis of the Allopolyploid Arabidopsis Suecica and Its Maternal Parent A. Thaliana
-
-
Jakobsson, M.1
Säll, T.2
Lind-Halldén, C.3
Halldén, C.4
-
14
-
-
4544293053
-
Counting alleles with rarefaction: Private alleles and hiearchical sampling design
-
Kalinowski, S. T. 2004. Counting alleles with rarefaction: private alleles and hiearchical sampling design. Conserv. Genet. 5:539-543.
-
(2004)
Conserv. Genet.
, vol.5
, pp. 539-543
-
-
Kalinowski, S.T.1
-
15
-
-
0029257555
-
Analysis of a repetitive DNA family from Arabidopsis arenosa and relationships between Arabidopsis species
-
Kamm, A., I. Galasso, T. Schmidt, and J. Heslop-Harrison. 1995. Analysis of a repetitive DNA family from Arabidopsis arenosa and relationships between Arabidopsis species. Plant Mol. Biol. 27:853-862.
-
(1995)
Plant Mol. Biol.
, vol.27
, pp. 853-862
-
-
Kamm, A.1
Galasso, I.2
Schmidt, T.3
Heslop-Harrison, J.4
-
16
-
-
0033804889
-
Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis and related genera (Brassicaceae)
-
Koch, M., B. Haubold, and T. Mitchell-Olds. 2000. Comparative evolutionary analysis of chalcone synthase and alcohol dehydrogenase loci in Arabidopsis, Arabis and related genera (Brassicaceae). Mol. Biol. Evol. 17:1483-1498.
-
(2000)
Mol. Biol. Evol.
, vol.17
, pp. 1483-1498
-
-
Koch, M.1
Haubold, B.2
Mitchell-Olds, T.3
-
17
-
-
0034255126
-
Comparing sequenced segments of the tomato and Arabidopsis genomes: Largescale duplication followed by selective gene loss creates a network of synteny
-
USA
-
Ku, H., T. Vision, J. Liu, and S. Tanksley. 2000. Comparing sequenced segments of the tomato and Arabidopsis genomes: largescale duplication followed by selective gene loss creates a network of synteny. Proc. Natl. Acad. Sci. USA 97:9121-9126.
-
(2000)
Proc. Natl. Acad. Sci.
, vol.97
, pp. 9121-9126
-
-
Ku, H.1
Vision, T.2
Liu, J.3
Tanksley, S.4
-
18
-
-
0034123358
-
Nucleotide variation at the Chalcone isomeras locus in Arabidopsis thaliana
-
Kuittinen, H., and M. Aguadé. 2000. Nucleotide variation at the Chalcone isomeras locus in Arabidopsis thaliana. Genetics 155:863-872.
-
(2000)
Genetics
, vol.155
, pp. 863-872
-
-
Kuittinen, H.1
Aguadé, M.2
-
19
-
-
0042195289
-
Chromosome counts in Cardaminopsis arenosa Agg. (Cruciferae)
-
Mesicek, J. 1970. Chromosome counts in Cardaminopsis arenosa Agg. (Cruciferae). Preslia 42:225-248.
-
(1970)
Preslia
, vol.42
, pp. 225-248
-
-
Mesicek, J.1
-
20
-
-
0028317547
-
Subunit polypeptide composition of Rubisco and the origin of allopolyploid Arabidopsis suecica (Brassicaceae)
-
Mummenhoff, K., and H. Hurka. 1994. Subunit polypeptide composition of Rubisco and the origin of allopolyploid Arabidopsis suecica (Brassicaceae). Biochem. Syst. Ecol. 22:807-812.
-
(1994)
Biochem. Syst. Ecol.
, vol.22
, pp. 807-812
-
-
Mummenhoff, K.1
Hurka, H.2
-
21
-
-
0032231870
-
On the probability of Neanderthal ancestry
-
Nordborg, M. 1998. On the probability of Neanderthal ancestry. Am. J. Hum. Genet. 63:1237-1240.
-
(1998)
Am. J. Hum. Genet.
, vol.63
, pp. 1237-1240
-
-
Nordborg, M.1
-
22
-
-
0000913208
-
Coalescent theory
-
D. J. Balding, M. J. Bishop, and C. Cannings, eds. John Wiley & Sons, Inc., Chichester, UK
-
_. 2001. Coalescent theory. Pp. 179-212 in D. J. Balding, M. J. Bishop, and C. Cannings, eds. Handbook of statistical genetics. John Wiley & Sons, Inc., Chichester, UK.
-
(2001)
Handbook of Statistical Genetics
, pp. 179-212
-
-
-
23
-
-
0033301744
-
The effect of seed and rosette cold treatment on germination and flowering time in some Arabidopsis thaliana Brassicaceae ecotypes
-
Nordborg, M., and J. Bergelson. 1999. The effect of seed and rosette cold treatment on germination and flowering time in some Arabidopsis thaliana Brassicaceae ecotypes. Am. J. Bot. 86:470-475.
-
(1999)
Am. J. Bot.
, vol.86
, pp. 470-475
-
-
Nordborg, M.1
Bergelson, J.2
-
24
-
-
0036479020
-
The extent of linkage disequilibrium in Arabidopsis thaliana
-
Nordborg, M., J. Borevitz, J. Bergelson et al. (12 co-authors). 2002. The extent of linkage disequilibrium in Arabidopsis thaliana. Nat. Genet. 30:190-193.
-
(2002)
Nat. Genet.
, vol.30
, pp. 190-193
-
-
Nordborg, M.1
Borevitz, J.2
Bergelson, J.3
-
25
-
-
22744434580
-
The pattern of polymorphism in Arabidopsis thaliana
-
Nordborg M., T. Hu, Y. Ishino et al. (23 co-authors). 2005. The pattern of polymorphism in Arabidopsis thaliana. PLoS Biol. 3:1289-1299.
-
(2005)
PLoS Biol.
, vol.3
, pp. 1289-1299
-
-
Nordborg, M.1
Hu, T.2
Ishino, Y.3
-
26
-
-
0030822809
-
The coalescent process with selfing
-
Nordborg M., and P. Donnelly. 1997. The coalescent process with selfing. Genetics 146:1185-1195.
-
(1997)
Genetics
, vol.146
, pp. 1185-1195
-
-
Nordborg, M.1
Donnelly, P.2
-
27
-
-
0141991410
-
The origin of Arabidopsis suecica (Brassicaceae) as indicated by nuclear rDNA sequences
-
O'kane, S., B. Schaal, and I. Al-Shehbaz. 1996. The origin of Arabidopsis suecica (Brassicaceae) as indicated by nuclear rDNA sequences. Syst. Bot. 21:559-566.
-
(1996)
Syst. Bot.
, vol.21
, pp. 559-566
-
-
O'Kane, S.1
Schaal, B.2
Al-Shehbaz, I.3
-
28
-
-
0037370585
-
Understanding mechanisms of novel gene expression in polyploids
-
Osborn, T., J. Pires, J. Birchler et al. (11 co-authors). 2003. Understanding mechanisms of novel gene expression in polyploids. TIG 19:141-147.
-
(2003)
TIG
, vol.19
, pp. 141-147
-
-
Osborn, T.1
Pires, J.2
Birchler, J.3
-
29
-
-
0015765702
-
A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population
-
Ohta, T., and M. Kimura. 1973. A model of mutation appropriate to estimate the number of electrophoretically detectable alleles in a finite population. Genet. Res. 22:201-204.
-
(1973)
Genet. Res.
, vol.22
, pp. 201-204
-
-
Ohta, T.1
Kimura, M.2
-
30
-
-
11144224315
-
Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome
-
USA
-
Pontes O., N. Neves, M. Silva, M. S. Lewis, A. Madlung, L. Comai, W. Viegas, and C. S. Pikaard. 2004. Chromosomal locus rearrangements are a rapid response to formation of the allotetraploid Arabidopsis suecica genome. Proc. Natl. Acad. Sci. USA 101:18240-18245.
-
(2004)
Proc. Natl. Acad. Sci.
, vol.101
, pp. 18240-18245
-
-
Pontes, O.1
Neves, N.2
Silva, M.3
Lewis, M.S.4
Madlung, A.5
Comai, L.6
Viegas, W.7
Pikaard, C.S.8
-
31
-
-
0001818647
-
-
E. Meyerowitz and C. Somerville, eds. Cold Spring Harbour Laboratory Press, New York
-
Price, R. A., I. A. Al-Shebaz, and J. D. Palmer. 1994. Systematic relationships of Arabidopsis: a molecular and morphological perspective in Arabidopsis. Pp. 7-19 in E. Meyerowitz and C. Somerville, eds. Cold Spring Harbour Laboratory Press, New York.
-
(1994)
Systematic Relationships of Arabidopsis: a Molecular and Morphological Perspective in Arabidopsis.
, pp. 7-19
-
-
Price, R.A.1
Al-Shebaz, I.A.2
Palmer, J.D.3
-
32
-
-
0032735986
-
Population growth of human Y chromosomes: A study of Y chromosome microsatellites
-
Pritchard, J. K., M. T. Seielstad, A. Perez-Lezaun, and M. W. Feldman. 1999. Population growth of human Y chromosomes: a study of Y chromosome microsatellites. Mol. Biol. Evol. 16:1791-1798.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1791-1798
-
-
Pritchard, J.K.1
Seielstad, M.T.2
Perez-Lezaun, A.3
Feldman, M.W.4
-
33
-
-
0036245438
-
Genealogical trees, coalescent theory, and the analysis of genetic polymorphisms
-
Rosenberg, N. A., and M. Nordborg. 2002. Genealogical trees, coalescent theory, and the analysis of genetic polymorphisms. Nature Rev. Genet. 3:380-390.
-
(2002)
Nature Rev. Genet.
, vol.3
, pp. 380-390
-
-
Rosenberg, N.A.1
Nordborg, M.2
-
34
-
-
0023375195
-
The neighbor-joining method - A new method for reconstructing phylogenetic trees
-
Saitou, N., and M. Nei. 1987. The neighbor-joining method - a new method for reconstructing phylogenetic trees. Mol. Biol. Evol. 4:406-425.
-
(1987)
Mol. Biol. Evol.
, vol.4
, pp. 406-425
-
-
Saitou, N.1
Nei, M.2
-
35
-
-
0043241879
-
Chloroplast DNA indicates a single origin of the allotetraploid Arabidopsis suecica
-
Säll, T., M. Jakobsson, C. Lind-Halldén, and C. Halldén. 2003. Chloroplast DNA indicates a single origin of the allotetraploid Arabidopsis suecica. J. Evol. Biol. 16:1019-1029.
-
(2003)
J. Evol. Biol.
, vol.16
, pp. 1019-1029
-
-
Säll, T.1
Jakobsson, M.2
Lind-Halldén, C.3
Halldén, C.4
-
36
-
-
14944367310
-
Mode of reproduction in Arabidopsis suecica
-
Säll, T., C. Lind-Halldén, M. Jakobsson, and C. Halldén. 2004. Mode of reproduction in Arabidopsis suecica. Hereditas 141:313-317.
-
(2004)
Hereditas
, vol.141
, pp. 313-317
-
-
Säll, T.1
Lind-Halldén, C.2
Jakobsson, M.3
Halldén, C.4
-
37
-
-
0031029760
-
Low mutation rates of microsatellite loci in Drosophila melanogaster
-
Schug, M. D., T. F. C. MacKay, and C. F. Aquadro. 1997. Low mutation rates of microsatellite loci in Drosophila melanogaster. Nat. Genet. 15:99-102.
-
(1997)
Nat. Genet.
, vol.15
, pp. 99-102
-
-
Schug, M.D.1
MacKay, T.F.C.2
Aquadro, C.F.3
-
38
-
-
84891034609
-
Molecular data and the dynamic nature of polyploidy
-
Soltis, D., and P. Soltis. 1993. Molecular data and the dynamic nature of polyploidy. Crit. Rev. Plant Sci. 12:243-273.
-
(1993)
Crit. Rev. Plant Sci.
, vol.12
, pp. 243-273
-
-
Soltis, D.1
Soltis, P.2
-
39
-
-
0029162810
-
Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution
-
USA
-
Song, K., P. Lu, K. Tang, and T. C. Osborn. 1995. Rapid genome change in synthetic polyploids of Brassica and its implications for polyploid evolution. Proc. Natl. Acad. Sci. USA 92:7719-7723.
-
(1995)
Proc. Natl. Acad. Sci.
, vol.92
, pp. 7719-7723
-
-
Song, K.1
Lu, P.2
Tang, K.3
Osborn, T.C.4
-
41
-
-
0031014291
-
Inferring coalescence times from DNA sequence data
-
Tavaré, S., D. J. Balding, R. C. Griffiths, and P. Donnelly. 1997. Inferring coalescence times from DNA sequence data. Genetics 145:505-518.
-
(1997)
Genetics
, vol.145
, pp. 505-518
-
-
Tavaré, S.1
Balding, D.J.2
Griffiths, R.C.3
Donnelly, P.4
-
42
-
-
33646861840
-
Estimation of the mutation rates in Drosophila melanogaster
-
Vazquez, F., T. Perez, J. Albornoz, and A. Dominguez. 2000. Estimation of the mutation rates in Drosophila melanogaster. Genet. Res. 76:232-326.
-
(2000)
Genet. Res.
, vol.76
, pp. 232-326
-
-
Vazquez, F.1
Perez, T.2
Albornoz, J.3
Dominguez, A.4
-
43
-
-
0036667686
-
Rate and pattern of mutation at microsatellite loci in maize
-
Vigouroux Y, J. S. Jaqueth, Y. Matsuoka, O. S. Smith, W. F. Beavis, J. S. C. Smith, and J. Doebley. 2002. Rate and pattern of mutation at microsatellite loci in maize. Mol. Biol. Evol. 19:1251-1260.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1251-1260
-
-
Vigouroux, Y.1
Jaqueth, J.S.2
Matsuoka, Y.3
Smith, O.S.4
Beavis, W.F.5
Smith, J.S.C.6
Doebley, J.7
-
44
-
-
0033974956
-
Genome evolution in polyploids
-
Wendel, J. 2000. Genome evolution in polyploids. Plant Mol. Biol. 42:225-249.
-
(2000)
Plant Mol. Biol.
, vol.42
, pp. 225-249
-
-
Wendel, J.1
-
45
-
-
0036729901
-
Rates and patterns of molecular evolution in inbred and outbred Arabidopsis
-
Wright, S., B. Lauga, and D. Charlesworth. 2002. Rates and patterns of molecular evolution in inbred and outbred Arabidopsis. Mol. Biol. Evol. 19:1407-1420.
-
(2002)
Mol. Biol. Evol.
, vol.19
, pp. 1407-1420
-
-
Wright, S.1
Lauga, B.2
Charlesworth, D.3
-
46
-
-
0034111151
-
The direction of microsatellite mutations is dependent upon the allele length
-
Xu, X., M. Peng, Z. Fang, and X. Xu. 2000. The direction of microsatellite mutations is dependent upon the allele length. Nat. Genet. 24:396-399.
-
(2000)
Nat. Genet.
, vol.24
, pp. 396-399
-
-
Xu, X.1
Peng, M.2
Fang, Z.3
Xu, X.4
-
47
-
-
0033257252
-
Molecular phylogenetic studies of Brassica, Rorippa, Arabidopsis and allied genera based on the internal transcribed spacer region of 18S-25S rDNA
-
Yang, Y.-W., K.-N. Lai, P.-Y. Tai, D.-P. Ma, and W.-H. Li. 1999. Molecular phylogenetic studies of Brassica, Rorippa, Arabidopsis and allied genera based on the internal transcribed spacer region of 18S-25S rDNA. Mol. Phylogenet. Evol. 13:455-462.
-
(1999)
Mol. Phylogenet. Evol.
, vol.13
, pp. 455-462
-
-
Yang, Y.-W.1
Lai, K.-N.2
Tai, P.-Y.3
Ma, D.-P.4
Li, W.-H.5
|