-
1
-
-
84864604524
-
Evaluation of the compact high-field orbitrap for topdown proteomics of human cells
-
Ahlf DR, Compton PD, Tran JC, Early BP, Thomas PM, Kelleher NL (2012) Evaluation of the compact high-field orbitrap for topdown proteomics of human cells. J Proteome Res 11(8):4308-4314
-
(2012)
J Proteome Res
, vol.11
, Issue.8
, pp. 4308-4314
-
-
Ahlf, D.R.1
Compton, P.D.2
Tran, J.C.3
Early, B.P.4
Thomas, P.M.5
Kelleher, N.L.6
-
2
-
-
60149111900
-
Characterization of glycopeptides by combining collision-induced dissociation and electron-transfer dissociation mass spectrometry data
-
Alley WR Jr, Mechref Y, Novotny MV (2009) Characterization of glycopeptides by combining collision-induced dissociation and electron-transfer dissociation mass spectrometry data. Rapid Commun Mass Spectrom 23:161-170
-
(2009)
Rapid Commun Mass Spectrom
, vol.23
, pp. 161-170
-
-
Alley Jr., W.R.1
Mechref, Y.2
Novotny, M.V.3
-
3
-
-
84859560597
-
N-linked glycan structures and their expressions change in the blood sera of ovarian cancer patients
-
Alley WR Jr, Vasseur JA, Goetz JA, Svoboda M, Mann BF, Matei DE, Menning N, Hussein A, Mechref Y, Novotny MV (2012) N-linked glycan structures and their expressions change in the blood sera of ovarian cancer patients. J Proteome Res 11:2282-2300
-
(2012)
J Proteome Res
, vol.11
, pp. 2282-2300
-
-
Alley Jr., W.R.1
Vasseur, J.A.2
Goetz, J.A.3
Svoboda, M.4
Mann, B.F.5
Matei, D.E.6
Menning, N.7
Hussein, A.8
Mechref, Y.9
Novotny, M.V.10
-
4
-
-
84856841046
-
2-deoxy D-glucose prevents cell surface expression of NKG2D ligands through inhibition of N-linked glycosylation
-
Andresen L, Skovbakke SL, Persson G, Hagemann-Jensen M, Hansen KA, Jensen H, Skov S (2012) 2-deoxy D-glucose prevents cell surface expression of NKG2D ligands through inhibition of N-linked glycosylation. J Immunol 188:1847-1855
-
(2012)
J Immunol
, vol.188
, pp. 1847-1855
-
-
Andresen, L.1
Skovbakke, S.L.2
Persson, G.3
Hagemann-Jensen, M.4
Hansen, K.A.5
Jensen, H.6
Skov, S.7
-
5
-
-
4744355031
-
Nonergodic and conformational control of the electron capture dissociation of protein cations
-
DOI 10.1073/pnas.0406095101
-
Breuker K, Oh H, Lin C, Carpenter BK, McLafferty FW (2004) Nonergodic and conformational control of the electron capture dissociation of protein cations. Proc Natl Acad Sci USA 101:14011-14016 (Pubitemid 39310538)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.39
, pp. 14011-14016
-
-
Breuker, K.1
Oh, H.2
Lin, C.3
Carpenter, B.K.4
McLafferty, F.W.5
-
6
-
-
33947204534
-
Electron transfer dissociation of N-glycopeptides: Loss of the entire N-glycosylated asparagine side chain
-
DOI 10.1002/rcm.2929
-
Catalina MI, Koeleman CA, Deelder AM, Wuhrer M (2007) Electron transfer dissociation of N-glycopeptides: loss of the entire N-glycosylated asparagine side chain. Rapid Commun Mass Spectrom 21:1053-1061 (Pubitemid 46426828)
-
(2007)
Rapid Communications in Mass Spectrometry
, vol.21
, Issue.6
, pp. 1053-1061
-
-
Catalina, M.I.1
Koeleman, C.A.M.2
Deelder, A.M.3
Wuhrer, M.4
-
7
-
-
84887867329
-
Large-scale top-down proteomics of the human proteome: Membrane proteins, mitochondria, and senescence
-
Catherman AD, Durbin KR, Ahlf DR, Early BP, Fellers RT, Tran JC, Thomas PM, Kelleher NL (2013) Large-scale top-down proteomics of the human proteome: membrane proteins, mitochondria, and senescence. Mol Cell Proteomics 12:3465-3473
-
(2013)
Mol Cell Proteomics
, vol.12
, pp. 3465-3473
-
-
Catherman, A.D.1
Durbin, K.R.2
Ahlf, D.R.3
Early, B.P.4
Fellers, R.T.5
Tran, J.C.6
Thomas, P.M.7
Kelleher, N.L.8
-
8
-
-
84862786913
-
Development of a combined chemical and enzymatic approach for the mass spectrometric identification and quantification of aberrant N-glycosylation
-
Chen R, Wang F, Tan Y, Sun Z, Song C, Ye M, Wang H, Zou H (2012) Development of a combined chemical and enzymatic approach for the mass spectrometric identification and quantification of aberrant N-glycosylation. J Proteomics 75:1666-1674
-
(2012)
J Proteomics
, vol.75
, pp. 1666-1674
-
-
Chen, R.1
Wang, F.2
Tan, Y.3
Sun, Z.4
Song, C.5
Ye, M.6
Wang, H.7
Zou, H.8
-
9
-
-
84881201651
-
A 40-50 kDa glycoprotein associated with mucus is identified as a-1-acid glycoprotein in carcinoma of the stomach
-
Chirwa N, Govender D, Ndimba B, Lotz Z, Tyler M, Panieri E, Kahn D, Mall AS (2012) A 40-50 kDa glycoprotein associated with mucus is identified as a-1-acid glycoprotein in carcinoma of the stomach. J Cancer 3:83-92
-
(2012)
J Cancer
, vol.3
, pp. 83-92
-
-
Chirwa, N.1
Govender, D.2
Ndimba, B.3
Lotz, Z.4
Tyler, M.5
Panieri, E.6
Kahn, D.7
Mall, A.S.8
-
10
-
-
19444383866
-
Electron transfer dissociation of peptide anions
-
DOI 10.1016/j.jasms.2005.01.015, PII S1044030505000735
-
Coon JJ, Shabanowitz J, Hunt DF, Syka JE (2005) Electron transfer dissociation of peptide anions. J Am Soc Mass Spectrom 16:880-882 (Pubitemid 40725163)
-
(2005)
Journal of the American Society for Mass Spectrometry
, vol.16
, Issue.6
, pp. 880-882
-
-
Coon, J.J.1
Shabanowitz, J.2
Hunt, D.F.3
Syka, J.E.P.4
-
11
-
-
79960210781
-
Improved identification of O-linked glycopeptides from ETD data with optimized scoring for different charge states and cleavage specificities
-
Darula Z, Chalkley RJ, Lynn A, Baker PR, Medzihradszky KF (2011) Improved identification of O-linked glycopeptides from ETD data with optimized scoring for different charge states and cleavage specificities. Amino Acids 1:321-328
-
(2011)
Amino Acids
, vol.1
, pp. 321-328
-
-
Darula, Z.1
Chalkley, R.J.2
Lynn, A.3
Baker, P.R.4
Medzihradszky, K.F.5
-
12
-
-
72149102185
-
Affinity enrichment and characterization of mucin core-1 type glycopeptides from bovine serum
-
Darula Z, Medzihradszky KF (2009) Affinity enrichment and characterization of mucin core-1 type glycopeptides from bovine serum. Mol Cell Proteomics 8:2515-2526
-
(2009)
Mol Cell Proteomics
, vol.8
, pp. 2515-2526
-
-
Darula, Z.1
Medzihradszky, K.F.2
-
13
-
-
33847347565
-
Structural analysis of O-glycopeptides employing negative- and positive-ion multi-stage mass spectra obtained by collision-induced and electron-capture dissociations in linear ion trap time-of-flight mass spectrometry
-
DOI 10.1002/rcm.2885
-
Deguchi K, Ito H, Baba T, Hirabayashi A, Nakagawa H, Fumoto M, Hinou H, Nishimura S (2007) Structural analysis of O-glycopeptides employing negative- and positive-ion multi-stage mass spectra obtained by collision-induced and electron-capture dissociations in linear ion trap time-of-flight mass spectrometry. Rapid Commun Mass Spectrom 21:691-698 (Pubitemid 46340313)
-
(2007)
Rapid Communications in Mass Spectrometry
, vol.21
, Issue.5
, pp. 691-698
-
-
Deguchi, K.1
Ito, H.2
Baba, T.3
Hirabayashi, A.4
Nakagawa, H.5
Fumoto, M.6
Hinou, H.7
Nishimura, S.-I.8
-
14
-
-
33748310730
-
Protein analysis: From proteins to proteomes
-
Delom F, Chevet E (2006) Protein analysis: from proteins to proteomes. Proteome Sci 4:15
-
(2006)
Proteome Sci
, vol.4
, pp. 15
-
-
Delom, F.1
Chevet, E.2
-
15
-
-
84867576799
-
Gas-phase dissociation of glycosylated peptide ions
-
Dodds ED (2012) Gas-phase dissociation of glycosylated peptide ions. Mass Spectrom Rev 31:666-682
-
(2012)
Mass Spectrom Rev
, vol.31
, pp. 666-682
-
-
Dodds, E.D.1
-
16
-
-
84867009703
-
Application of the ETD/PTR reactions in top-down proteomics as a faster alternative to bottom-up nanoLC-MS/MS protein identification
-
Drabik A, Bodzon-Kulakowska A, Suder P (2012) Application of the ETD/PTR reactions in top-down proteomics as a faster alternative to bottom-up nanoLC-MS/MS protein identification. J Mass Spectrom 47:1347-1352
-
(2012)
J Mass Spectrom
, vol.47
, pp. 1347-1352
-
-
Drabik, A.1
Bodzon-Kulakowska, A.2
Suder, P.3
-
17
-
-
79551503762
-
Catch me if you can: Mass spectrometry-based phosphoproteomics and quantification strategies
-
Eyrich B, Sickmann A, Zahedi RP (2011) Catch me if you can: mass spectrometry-based phosphoproteomics and quantification strategies. Proteomics 11:554-570
-
(2011)
Proteomics
, vol.11
, pp. 554-570
-
-
Eyrich, B.1
Sickmann, A.2
Zahedi, R.P.3
-
18
-
-
84861389555
-
Herpes B virus utilizes human nectin-1 but not HVEM or PILRα for cell-cell fusion and virus entry
-
Fan Q, Amen M, Harden M, Severini A, Griffiths A, Longnecker R (2012) Herpes B virus utilizes human nectin-1 but not HVEM or PILRα for cell-cell fusion and virus entry. J Virol 86:4468-4476
-
(2012)
J Virol
, vol.86
, pp. 4468-4476
-
-
Fan, Q.1
Amen, M.2
Harden, M.3
Severini, A.4
Griffiths, A.5
Longnecker, R.6
-
19
-
-
84868535848
-
Fully automated chip-based nanoelectrospray combined with electron transfer dissociation for high throughput top-down proteomics
-
Flangea C, Schiopu C, Capitan F, Mosoarca C, Manea M, Sisu E, Zamfir AD (2013) Fully automated chip-based nanoelectrospray combined with electron transfer dissociation for high throughput top-down proteomics. Cent Eur J Chem 11:25-34
-
(2013)
Cent Eur J Chem
, vol.11
, pp. 25-34
-
-
Flangea, C.1
Schiopu, C.2
Capitan, F.3
Mosoarca, C.4
Manea, M.5
Sisu, E.6
Zamfir, A.D.7
-
20
-
-
84870653816
-
Analysis of intact monoclonal antibody IgG1 by electron transfer dissociation orbitrap FTMS
-
Fornelli L, Damoc E, Thomas PM, Kelleher NL, Aizikov K, Denisov E, Makarov A, Tsybin YO (2012) Analysis of intact monoclonal antibody IgG1 by electron transfer dissociation orbitrap FTMS. Mol Cell Proteomics 11:1758-1767
-
(2012)
Mol Cell Proteomics
, vol.11
, pp. 1758-1767
-
-
Fornelli, L.1
Damoc, E.2
Thomas, P.M.3
Kelleher, N.L.4
Aizikov, K.5
Denisov, E.6
Makarov, A.7
Tsybin, Y.O.8
-
21
-
-
79751504755
-
Phosphorylation mechanism and structure of serine-arginine protein kinases
-
Ghosh G, Adams JA (2011) Phosphorylation mechanism and structure of serine-arginine protein kinases. FEBS J 278:587-597
-
(2011)
FEBS J
, vol.278
, pp. 587-597
-
-
Ghosh, G.1
Adams, J.A.2
-
22
-
-
84865737357
-
Peptide identification by tandem mass spectrometry with alternate fragmentation modes
-
Guthals A, Bandeira N (2012) Peptide identification by tandem mass spectrometry with alternate fragmentation modes. Mol Cell Proteomics 9:550-557
-
(2012)
Mol Cell Proteomics
, vol.9
, pp. 550-557
-
-
Guthals, A.1
Bandeira, N.2
-
23
-
-
84873401358
-
LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins
-
Halim A, Rüetschi U, Larson G, Nilsson J (2013) LC-MS/MS characterization of O-glycosylation sites and glycan structures of human cerebrospinal fluid glycoproteins. J Proteome Res 12:573-584
-
(2013)
J Proteome Res
, vol.12
, pp. 573-584
-
-
Halim, A.1
Rüetschi, U.2
Larson, G.3
Nilsson, J.4
-
24
-
-
42949096464
-
Rapidly alternating transmission mode electron-transfer dissociation and collisional activation for the characterization of polypeptide ions
-
DOI 10.1021/ac7022734
-
Han H, Xia Y, Yang M, McLuckey SA (2008) Rapidly alternating transmission mode electron-transfer dissociation and collisional activation for the characterization of polypeptide ions. Anal Chem 80:3492-3497 (Pubitemid 351620739)
-
(2008)
Analytical Chemistry
, vol.80
, Issue.9
, pp. 3492-3497
-
-
Han, H.1
Xia, Y.2
Yang, M.3
McLuckey, S.A.4
-
25
-
-
84856330250
-
O-glycoproteomics: Site-specific O-glycoprotein analysis by CID/ETD electrospray ionization tandem mass spectrometry and top-down glycoprotein sequencing by insource decay MALDI mass spectrometry
-
Hanisch FG (2012) O-glycoproteomics: site-specific O-glycoprotein analysis by CID/ETD electrospray ionization tandem mass spectrometry and top-down glycoprotein sequencing by insource decay MALDI mass spectrometry. Methods Mol Biol 842:179-189
-
(2012)
Methods Mol Biol
, vol.842
, pp. 179-189
-
-
Hanisch, F.G.1
-
26
-
-
84869476043
-
Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry
-
Hansen TA, Sylvester M, Jensen ON, Kjeldsen F (2012) Automated and high confidence protein phosphorylation site localization using complementary collision-activated dissociation and electron transfer dissociation tandem mass spectrometry. Anal Chem 84:9694-9699
-
(2012)
Anal Chem
, vol.84
, pp. 9694-9699
-
-
Hansen, T.A.1
Sylvester, M.2
Jensen, O.N.3
Kjeldsen, F.4
-
27
-
-
79955555659
-
Targeting the phosphatidylinositol 3-kinase signaling pathway in breast cancer
-
Hernandez-Aya LF, Gonzalez-Angulo AM (2011) Targeting the phosphatidylinositol 3-kinase signaling pathway in breast cancer. Oncologist 16:404-414
-
(2011)
Oncologist
, vol.16
, pp. 404-414
-
-
Hernandez-Aya, L.F.1
Gonzalez-Angulo, A.M.2
-
28
-
-
17444375706
-
Complementary structural information from a tryptic N-linked glycopeptide via electron transfer ion/ion reactions and collision-induced dissociation
-
DOI 10.1021/pr049770q
-
Hogan JM, Pitteri SJ, Chrisman PA, McLuckey SA (2005) Complementary structural information from a tryptic N-linked glycopeptide via electron transfer ion/ion reactions and collision-induced dissociation. J Proteome Res 4:628-632 (Pubitemid 40548173)
-
(2005)
Journal of Proteome Research
, vol.4
, Issue.2
, pp. 628-632
-
-
Hogan, J.M.1
Pitteri, S.J.2
Chrisman, P.A.3
McLuckey, S.A.4
-
29
-
-
84855405436
-
Tandem mass tag protein labeling for top-down identification and quantification
-
Hung CW, Tholey A (2012) Tandem mass tag protein labeling for top-down identification and quantification. Anal Chem 84:161-170
-
(2012)
Anal Chem
, vol.84
, pp. 161-170
-
-
Hung, C.W.1
Tholey, A.2
-
30
-
-
80051624221
-
Dissociation techniques in mass spectrometry-based proteomics
-
Jones AW, Cooper HJ (2011) Dissociation techniques in mass spectrometry-based proteomics. Analyst 136:3419-3429
-
(2011)
Analyst
, vol.136
, pp. 3419-3429
-
-
Jones, A.W.1
Cooper, H.J.2
-
32
-
-
84859222468
-
Electron transfer dissociation mass spectrometry in proteomics
-
Kim MS, Pandey A (2012) Electron transfer dissociation mass spectrometry in proteomics. Proteomics 12:530-542
-
(2012)
Proteomics
, vol.12
, pp. 530-542
-
-
Kim, M.S.1
Pandey, A.2
-
33
-
-
80051672948
-
Tools for analyzing the phosphoproteome and other phosphorylated biomolecules: A review
-
Leitner A, Sturm M, Lindner W (2011) Tools for analyzing the phosphoproteome and other phosphorylated biomolecules: a review. Anal Chim Acta 703:19-30
-
(2011)
Anal Chim Acta
, vol.703
, pp. 19-30
-
-
Leitner, A.1
Sturm, M.2
Lindner, W.3
-
34
-
-
79952690543
-
How phosphorylation controls p53
-
MacLaine NJ, Hupp TR (2011) How phosphorylation controls p53. Cell Cycle 10:916-921
-
(2011)
Cell Cycle
, vol.10
, pp. 916-921
-
-
MacLaine, N.J.1
Hupp, T.R.2
-
35
-
-
84874103116
-
Glycopeptide identification using liquid-chromatography-compatible hot electron capture dissociation in a radiofrequency-quadrupole ion trap
-
Manri N, Satake H, Kaneko A, Hirabayashi A, Baba T, Sakamoto T (2013) Glycopeptide identification using liquid-chromatography-compatible hot electron capture dissociation in a radiofrequency-quadrupole ion trap. Anal Chem 85:2056-2063
-
(2013)
Anal Chem
, vol.85
, pp. 2056-2063
-
-
Manri, N.1
Satake, H.2
Kaneko, A.3
Hirabayashi, A.4
Baba, T.5
Sakamoto, T.6
-
36
-
-
84877328542
-
Top-down structural analysis of an intact monoclonal antibody by electron capture dissociation-Fourier transform ion cyclotron resonance-mass spectrometry
-
Mao Y, Valeja SG, Rouse JC, Hendrickson CL, Marshall AG (2013) Top-down structural analysis of an intact monoclonal antibody by electron capture dissociation-Fourier transform ion cyclotron resonance-mass spectrometry. Anal Chem 85:4239-4246
-
(2013)
Anal Chem
, vol.85
, pp. 4239-4246
-
-
Mao, Y.1
Valeja, S.G.2
Rouse, J.C.3
Hendrickson, C.L.4
Marshall, A.G.5
-
37
-
-
84903644538
-
Practical aspects of trapped ion mass spectrometry
-
CRC Press, USA
-
McAlister GC, Coon JJ (2010) Practical aspects of trapped ion mass spectrometry, Applications of ion trapping devices, vol V. CRC Press, USA, pp 59-73
-
(2010)
Applications of Ion Trapping Devices
, vol.5
, pp. 59-73
-
-
McAlister, G.C.1
Coon, J.J.2
-
38
-
-
84858719158
-
Analysis of the acidic proteome with negative electron-transfer dissociation mass spectrometry
-
McAlister GC, Russell JD, Rumachik NG, Hebert AS, Syka JE, Geer LY, Westphall MS, Pagliarini DJ, Coon JJ (2012) Analysis of the acidic proteome with negative electron-transfer dissociation mass spectrometry. Anal Chem 84:2875-2882
-
(2012)
Anal Chem
, vol.84
, pp. 2875-2882
-
-
McAlister, G.C.1
Russell, J.D.2
Rumachik, N.G.3
Hebert, A.S.4
Syka, J.E.5
Geer, L.Y.6
Westphall, M.S.7
Pagliarini, D.J.8
Coon, J.J.9
-
39
-
-
84862909346
-
Requirements for efficient correction of ΔF508 CFTR revealed by analyses of evolved sequences
-
Mendoza JL, Schmidt A, Li Q, Nuvaga E, Barrett T, Bridges RJ, Feranchak AP, Brautigam CA, Thomas PJ (2012) Requirements for efficient correction of ΔF508 CFTR revealed by analyses of evolved sequences. Cell 148:164-174
-
(2012)
Cell
, vol.148
, pp. 164-174
-
-
Mendoza, J.L.1
Schmidt, A.2
Li, Q.3
Nuvaga, E.4
Barrett, T.5
Bridges, R.J.6
Feranchak, A.P.7
Brautigam, C.A.8
Thomas, P.J.9
-
40
-
-
84862596522
-
Impact of phosphoproteomics on studies of bacterial physiology
-
Mijakovic I, Macek B (2012) Impact of phosphoproteomics on studies of bacterial physiology. FEMS Microbiol Rev 36:877-892
-
(2012)
FEMS Microbiol Rev
, vol.36
, pp. 877-892
-
-
Mijakovic, I.1
Macek, B.2
-
42
-
-
79955792471
-
Tandem mass spectrometry strategies for phosphoproteome analysis
-
Palumbo AM, Smith SA, Kalcic CL, Dantus M, Stemmer PM, Reid GE (2011) Tandem mass spectrometry strategies for phosphoproteome analysis. Mass Spectrom Rev 30:600-625
-
(2011)
Mass Spectrom Rev
, vol.30
, pp. 600-625
-
-
Palumbo, A.M.1
Smith, S.A.2
Kalcic, C.L.3
Dantus, M.4
Stemmer, P.M.5
Reid, G.E.6
-
43
-
-
84874978868
-
Top-down structural analysis of posttranslationally modified proteins by Fourier transform ion cyclotron resonance-MS with hydrogen/deuterium exchange and electron capture dissociation
-
Pan J, Borchers CH (2013) Top-down structural analysis of posttranslationally modified proteins by Fourier transform ion cyclotron resonance-MS with hydrogen/deuterium exchange and electron capture dissociation. Proteomics 13:974-981
-
(2013)
Proteomics
, vol.13
, pp. 974-981
-
-
Pan, J.1
Borchers, C.H.2
-
44
-
-
61849088987
-
Elucidation of O-glycosylation structures of the beta-amyloid precursor protein by liquid chromatography-mass spectrometry using electron transfer dissociation and collision induced dissociation
-
Perdivara I, Petrovich R, Allinquant B, Deterding LJ, Tomer KB, Przybylski M (2009) Elucidation of O-glycosylation structures of the beta-amyloid precursor protein by liquid chromatography-mass spectrometry using electron transfer dissociation and collision induced dissociation. J Proteome Res 8:631-642
-
(2009)
J Proteome Res
, vol.8
, pp. 631-642
-
-
Perdivara, I.1
Petrovich, R.2
Allinquant, B.3
Deterding, L.J.4
Tomer, K.B.5
Przybylski, M.6
-
45
-
-
84877096549
-
Aberrant expression of mucin core proteins and O-linked glycans associated with progression of pancreatic cancer
-
Remmers N, Anderson JM, Linde EM, DiMaio DJ, Lazenby AJ, Wandall HH, Mandel U, Clausen H, Yu F, Hollingsworth MA (2013) Aberrant expression of mucin core proteins and O-linked glycans associated with progression of pancreatic cancer. Clin Cancer Res 19:1981-1993
-
(2013)
Clin Cancer Res
, vol.19
, pp. 1981-1993
-
-
Remmers, N.1
Anderson, J.M.2
Linde, E.M.3
DiMaio, D.J.4
Lazenby, A.J.5
Wandall, H.H.6
Mandel, U.7
Clausen, H.8
Yu, F.9
Hollingsworth, M.A.10
-
46
-
-
79953174969
-
Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni
-
Scott NE, Parker BL, Connolly AM, Paulech J, Edwards AV, Crossett B, Falconer L, Kolarich D, Djordjevic SP, Højrup P, Packer NH, Larsen MR, Cordwell SJ (2011) Simultaneous glycan-peptide characterization using hydrophilic interaction chromatography and parallel fragmentation by CID, higher energy collisional dissociation, and electron transfer dissociation MS applied to the N-linked glycoproteome of Campylobacter jejuni. Mol Cell Proteomics 10(2):M000031-MCP201
-
(2011)
Mol Cell Proteomics
, vol.10
, Issue.2
-
-
Scott, N.E.1
Parker, B.L.2
Connolly, A.M.3
Paulech, J.4
Edwards, A.V.5
Crossett, B.6
Falconer, L.7
Kolarich, D.8
Djordjevic, S.P.9
Højrup, P.10
Packer, N.H.11
Larsen, M.R.12
Cordwell, S.J.13
-
47
-
-
84866084330
-
Higher energy collision dissociation (HCD) product ion-triggered electron transfer dissociation (ETD) mass spectrometry for the analysis of N-linked glycoproteins
-
Singh C, Zampronio CG, Creese AJ, Cooper HJ (2012) Higher energy collision dissociation (HCD) product ion-triggered electron transfer dissociation (ETD) mass spectrometry for the analysis of N-linked glycoproteins. J Proteome Res 11:4517-4525
-
(2012)
J Proteome Res
, vol.11
, pp. 4517-4525
-
-
Singh, C.1
Zampronio, C.G.2
Creese, A.J.3
Cooper, H.J.4
-
48
-
-
77949569318
-
A simple cellulose column procedure for selective enrichment of glycopeptides and characterization by nano LC coupled with electrontransfer and high-energy collisional-dissociation tandem mass spectrometry
-
Snovida SI, Bodnar ED, Viner R, Saba J, Perreault H (2010) A simple cellulose column procedure for selective enrichment of glycopeptides and characterization by nano LC coupled with electrontransfer and high-energy collisional-dissociation tandem mass spectrometry. Carbohydr Res 345:792-801
-
(2010)
Carbohydr Res
, vol.345
, pp. 792-801
-
-
Snovida, S.I.1
Bodnar, E.D.2
Viner, R.3
Saba, J.4
Perreault, H.5
-
49
-
-
59049086847
-
Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry
-
Swaney DL, Wenger CD, Thomson JA, Coon JJ (2009) Human embryonic stem cell phosphoproteome revealed by electron transfer dissociation tandem mass spectrometry. Proc Natl Acad Sci USA 106:995-1000
-
(2009)
Proc Natl Acad Sci USA
, vol.106
, pp. 995-1000
-
-
Swaney, D.L.1
Wenger, C.D.2
Thomson, J.A.3
Coon, J.J.4
-
50
-
-
3042789073
-
Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry
-
DOI 10.1073/pnas.0402700101
-
Syka JE, Coon JJ, Schroeder MJ, Shabanowitz J, Hunt DF (2004) Peptide and protein sequence analysis by electron transfer dissociation mass spectrometry. Proc Natl Acad Sci USA 101:9528-9533 (Pubitemid 38869270)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.26
, pp. 9528-9533
-
-
Syka, J.E.P.1
Coon, J.J.2
Schroeder, M.J.3
Shabanowitz, J.4
Hunt, D.F.5
-
51
-
-
83755220066
-
Site-specific characterisation of densely O-glycosylated mucin-type peptides using electron transfer dissociation ESI-MS/MS
-
Thaysen-Andersen M, Wilkinson BL, Payne RJ, Packer NH (2011) Site-specific characterisation of densely O-glycosylated mucin-type peptides using electron transfer dissociation ESI-MS/MS. Electrophoresis 32:3536-3545
-
(2011)
Electrophoresis
, vol.32
, pp. 3536-3545
-
-
Thaysen-Andersen, M.1
Wilkinson, B.L.2
Payne, R.J.3
Packer, N.H.4
-
52
-
-
84876194893
-
Structure of the non-catalytic domain of the protein disulfide isomerase-related protein (PDIR) reveals function in protein binding
-
Vinaik R, Kozlov G, Gehring K (2013) Structure of the non-catalytic domain of the protein disulfide isomerase-related protein (PDIR) reveals function in protein binding. PLoS One 8(4):e62021
-
(2013)
PLoS One
, vol.8
, Issue.4
-
-
Vinaik, R.1
Kozlov, G.2
Gehring, K.3
-
53
-
-
79954616758
-
Ultrasensitive characterization of site-specific glycosylation of affinity-purified haptoglobin from lung cancer patient plasma using 10 μm i.D. Porous layer open tubular liquid chromatography-linear ion trap collision-induced dissociation/electron transfer dissociation mass spectrometry
-
Wang D, Hincapie M, Rejtar T, Karger BL (2011) Ultrasensitive characterization of site-specific glycosylation of affinity-purified haptoglobin from lung cancer patient plasma using 10 μm i.d. porous layer open tubular liquid chromatography-linear ion trap collision-induced dissociation/electron transfer dissociation mass spectrometry. Anal Chem 83:2029-2037
-
(2011)
Anal Chem
, vol.83
, pp. 2029-2037
-
-
Wang, D.1
Hincapie, M.2
Rejtar, T.3
Karger, B.L.4
-
54
-
-
30144438909
-
Methods in enzymology
-
Elsevier Academic Press, USA
-
Wells JM, McLuckey SA (2005) Methods in enzymology, Biological mass spectrometry, vol 402. Elsevier Academic Press, USA, pp 148-186
-
(2005)
Biological Mass Spectrometry
, vol.402
, pp. 148-186
-
-
Wells, J.M.1
McLuckey, S.A.2
-
55
-
-
36349016738
-
On-line LC-MS approach combining collision-induced dissociation (CID), electron-transfer dissociation (ETD), and CID of an isolated charge-reduced species for the trace-level characterization of proteins with post-translational modifications
-
DOI 10.1021/pr070313u
-
Wu SL, Hühmer AF, Hao Z, Karger BL (2007) On-line LC-MS approach combining collision-induced dissociation (CID), electron-transfer dissociation (ETD), and CID of an isolated charge-reduced species for the trace-level characterization of proteins with post-translational modifications. J Proteome Res 6:4230-4244 (Pubitemid 350158501)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.11
, pp. 4230-4244
-
-
Wu, S.-L.1
Huhmer, A.F.R.2
Hao, Z.3
Karger, B.L.4
-
56
-
-
84856238781
-
Elucidation of the sugar recognition ability of the lectin domain of UDP-GalNAc:Polypeptide N-acetylgalactosaminyltransferase 3 by using unnatural glycopeptide substrates
-
Yoshimura Y, Nudelman AS, Levery SB, Wandall HH, Bennett EP, Hindsgaul O, Clausen H, Nishimura S (2012) Elucidation of the sugar recognition ability of the lectin domain of UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 3 by using unnatural glycopeptide substrates. Glycobiology 22:429-438
-
(2012)
Glycobiology
, vol.22
, pp. 429-438
-
-
Yoshimura, Y.1
Nudelman, A.S.2
Levery, S.B.3
Wandall, H.H.4
Bennett, E.P.5
Hindsgaul, O.6
Clausen, H.7
Nishimura, S.8
-
57
-
-
79951996840
-
Comprehensive characterization of the site-specific N-glycosylation of wild-type and recombinant human lactoferrin expressed in the milk of transgenic cloned cattle
-
Yu T, Guo C, Wang J, Hao P, Sui S, Chen X, Zhang R, Wang P, Yu G, Zhang L, Dai Y, Li N (2011) Comprehensive characterization of the site-specific N-glycosylation of wild-type and recombinant human lactoferrin expressed in the milk of transgenic cloned cattle. Glycobiology 21:206-224
-
(2011)
Glycobiology
, vol.21
, pp. 206-224
-
-
Yu, T.1
Guo, C.2
Wang, J.3
Hao, P.4
Sui, S.5
Chen, X.6
Zhang, R.7
Wang, P.8
Yu, G.9
Zhang, L.10
Dai, Y.11
Li, N.12
-
58
-
-
84867825634
-
Protein O-glycosylation analysis
-
Zauner G, Kozak RP, Gardner RA, Fernandes DL, Deelder AM, Wuhrer M (2012) Protein O-glycosylation analysis. Biol Chem 393:687-708
-
(2012)
Biol Chem
, vol.393
, pp. 687-708
-
-
Zauner, G.1
Kozak, R.P.2
Gardner, R.A.3
Fernandes, D.L.4
Deelder, A.M.5
Wuhrer, M.6
-
59
-
-
78649861704
-
Lung cancer serum biomarker discovery using glycoprotein capture and liquid chromatography mass spectrometry
-
Zeng X, Hood BL, Sun M, Conrads TP, Day RS, Weissfeld JL, Siegfried JM, Bigbee WL (2010) Lung cancer serum biomarker discovery using glycoprotein capture and liquid chromatography mass spectrometry. J Proteome Res 9:6440-6449
-
(2010)
J Proteome Res
, vol.9
, pp. 6440-6449
-
-
Zeng, X.1
Hood, B.L.2
Sun, M.3
Conrads, T.P.4
Day, R.S.5
Weissfeld, J.L.6
Siegfried, J.M.7
Bigbee, W.L.8
-
60
-
-
34250797997
-
Enrichment and analysis of nonenzymatically glycated peptides: Boronate affinity chromatography coupled with electron-transfer dissociation mass spectrometry
-
DOI 10.1021/pr070112q
-
Zhang Q, Tang N, Brock JW, Mottaz HM, Ames JM, Baynes JW, Smith RD, Metz TO (2007) Enrichment and analysis of nonenzymatically glycated peptides: boronate affinity chromatography coupled with electron-transfer dissociation mass spectrometry. J Proteome Res 6:2323-2330 (Pubitemid 46985120)
-
(2007)
Journal of Proteome Research
, vol.6
, Issue.6
, pp. 2323-2330
-
-
Zhang, Q.1
Tang, N.2
Brock, J.W.C.3
Mottaz, H.M.4
Ames, J.M.5
Baynes, J.W.6
Smith, R.D.7
Metz, T.O.8
-
61
-
-
80053533242
-
Electron transfer dissociation of modified peptides and proteins
-
Zhou Y, Dong J, Vachet RW (2011) Electron transfer dissociation of modified peptides and proteins. Curr Pharm Biotechnol 12:1558-1567
-
(2011)
Curr Pharm Biotechnol
, vol.12
, pp. 1558-1567
-
-
Zhou, Y.1
Dong, J.2
Vachet, R.W.3
-
62
-
-
84877780038
-
Principles of electron capture and transfer dissociation mass spectrometry applied to peptide and protein structure analysis
-
Zhurov KO, Fornelli L, Wodrich MD, Laskay UA, Tsybin YO (2013) Principles of electron capture and transfer dissociation mass spectrometry applied to peptide and protein structure analysis. Chem Soc Rev 42(12):5014-5030
-
(2013)
Chem Soc Rev
, vol.42
, Issue.12
, pp. 5014-5030
-
-
Zhurov, K.O.1
Fornelli, L.2
Wodrich, M.D.3
Laskay, U.A.4
Tsybin, Y.O.5
-
63
-
-
33745616790
-
Protein primary structure using orthogonal fragmentation techniques in Fourier transform mass spectrometry
-
Zubarev R (2006) Protein primary structure using orthogonal fragmentation techniques in Fourier transform mass spectrometry. Expert Rev Proteomics 3:251-261
-
(2006)
Expert Rev Proteomics
, vol.3
, pp. 251-261
-
-
Zubarev, R.1
-
64
-
-
1242351309
-
Electron-capture dissociation tandem mass spectrometry
-
Zubarev RA (2004) Electron-capture dissociation tandem mass spectrometry. Curr Opin Biotechnol 15:12-16
-
(2004)
Curr Opin Biotechnol
, vol.15
, pp. 12-16
-
-
Zubarev, R.A.1
-
65
-
-
0034133274
-
Electron capture dissociation for structural characterization of multiply charged protein cations
-
DOI 10.1021/ac990811p
-
Zubarev RA, Horn DM, Fridriksson EK, Kelleher NL, Kruger NA, Lewis MA, Carpenter BK, McLafferty FW (2000) Electron capture dissociation for structural characterization of multiply charged protein cations. Anal Chem 72:563-573 (Pubitemid 33595293)
-
(2000)
Analytical Chemistry
, vol.72
, Issue.3
, pp. 563-573
-
-
Zubarev, R.A.1
Horn, D.M.2
Fridriksson, E.K.3
Kelleher, N.L.4
Kruger, N.A.5
Lewis, M.A.6
Carpenter, B.K.7
McLafferty, F.W.8
|