메뉴 건너뛰기




Volumn 9, Issue 12, 2010, Pages 6440-6449

Lung cancer serum biomarker discovery using glycoprotein capture and liquid chromatography mass spectrometry

Author keywords

[No Author keywords available]

Indexed keywords

GLYCOPEPTIDASE; GLYCOPEPTIDE; GLYCOPROTEIN; HYDRAZIDE; PLASMA PROTEIN; PROTEOME; RESIN; TRYPSIN; TUMOR MARKER;

EID: 78649861704     PISSN: 15353893     EISSN: 15353907     Source Type: Journal    
DOI: 10.1021/pr100696n     Document Type: Article
Times cited : (82)

References (37)
  • 1
    • 11144288577 scopus 로고    scopus 로고
    • Effect of tumor size on prognosis in patients with non-small cell lung cancer: The role of segmentectomy as a type of lesser resection
    • Okada, M.; Nishio, W.; Sakamoto, T.; Uchino, K.; Yuki, T.; Nakagawa, A.; Tsubota, N. Effect of tumor size on prognosis in patients with non-small cell lung cancer: the role of segmentectomy as a type of lesser resection J. Thorac. Cardiovasc. Surg. 2005, 129 (1) 87-93
    • (2005) J. Thorac. Cardiovasc. Surg. , vol.129 , Issue.1 , pp. 87-93
    • Okada, M.1    Nishio, W.2    Sakamoto, T.3    Uchino, K.4    Yuki, T.5    Nakagawa, A.6    Tsubota, N.7
  • 2
    • 77949350066 scopus 로고    scopus 로고
    • Cancer screening in the United States, 2010: A review of current American Cancer Society guidelines and issues in cancer screening
    • Smith, R. A.; Cokkinides, V.; Brooks, D.; Saslow, D.; Brawley, O. W. Cancer screening in the United States, 2010: a review of current American Cancer Society guidelines and issues in cancer screening CA Cancer J. Clin. 2010, 60 (2) 99-119
    • (2010) CA Cancer J. Clin. , vol.60 , Issue.2 , pp. 99-119
    • Smith, R.A.1    Cokkinides, V.2    Brooks, D.3    Saslow, D.4    Brawley, O.W.5
  • 3
    • 0029805812 scopus 로고    scopus 로고
    • Peripheral lung cancer: Screening and detection with low-dose spiral CT versus radiography
    • Kaneko, M.; Eguchi, K.; Ohmatsu, H.; Kakinuma, R.; Naruke, T.; Suemasu, K. Moriyama N.Peripheral lung cancer: screening and detection with low-dose spiral CT versus radiography Radiology 1996, 201 (3) 798-802
    • (1996) Radiology , vol.201 , Issue.3 , pp. 798-802
    • Kaneko, M.1    Eguchi, K.2    Ohmatsu, H.3    Kakinuma, R.4    Naruke, T.5    Suemasu, K.6    Moriyama, N.7
  • 6
    • 0023233060 scopus 로고
    • Prostate-specific antigen as a serum marker for adenocarcinoma of the prostate
    • Stamey, T. A.; Yang, N.; Hay, A. R.; McNeal, J. E.; Freiha, F. S.; Redwine, E. Prostate-specific antigen as a serum marker for adenocarcinoma of the prostate N. Engl. J. Med. 1987, 317 (15) 909-16
    • (1987) N. Engl. J. Med. , vol.317 , Issue.15 , pp. 909-16
    • Stamey, T.A.1    Yang, N.2    Hay, A.R.3    McNeal, J.E.4    Freiha, F.S.5    Redwine, E.6
  • 7
    • 0022964531 scopus 로고
    • Clinical evaluation of an immunoradiometric assay for CA15-3 antigen associated with human mammary carcinomas: Comparison with carcinoembryonic antigen
    • Fujino, N.; Haga, Y.; Sakamoto, K.; Egami, H.; Kimura, M. Clinical evaluation of an immunoradiometric assay for CA15-3 antigen associated with human mammary carcinomas: comparison with carcinoembryonic antigen Jpn. J. Clin. Oncol. 1986, 16 (4) 335-46
    • (1986) Jpn. J. Clin. Oncol. , vol.16 , Issue.4 , pp. 335-46
    • Fujino, N.1    Haga, Y.2    Sakamoto, K.3    Egami, H.4    Kimura, M.5
  • 8
    • 1642524278 scopus 로고    scopus 로고
    • Serum tumor markers in the management of ovarian, endometrial and cervical cancer
    • Gadducci, A.; Cosio, S.; Carpi, A.; Nicolini, A.; Genazzani, A. R. Serum tumor markers in the management of ovarian, endometrial and cervical cancer Biomed. Pharmacother. 2004, 58 (1) 24-38
    • (2004) Biomed. Pharmacother. , vol.58 , Issue.1 , pp. 24-38
    • Gadducci, A.1    Cosio, S.2    Carpi, A.3    Nicolini, A.4    Genazzani, A.R.5
  • 9
    • 60549088708 scopus 로고    scopus 로고
    • Diagnostic precision of carcinoembryonic antigen in the detection of recurrence of colorectal cancer
    • Tan, E.; Gouvas, N.; Nicholls, R. J.; Ziprin, P.; Xynos, E.; Tekkis, P. P. Diagnostic precision of carcinoembryonic antigen in the detection of recurrence of colorectal cancer Surg. Oncol. 2009, 18 (1) 15-24
    • (2009) Surg. Oncol. , vol.18 , Issue.1 , pp. 15-24
    • Tan, E.1    Gouvas, N.2    Nicholls, R.J.3    Ziprin, P.4    Xynos, E.5    Tekkis, P.P.6
  • 10
    • 0001644020 scopus 로고    scopus 로고
    • The human plasma proteome: History, character, and diagnostic prospects
    • Anderson, N. L.; Anderson, N. G. The human plasma proteome: history, character, and diagnostic prospects Mol. Cell. Proteomics. 2002, 1 (11) 845-67
    • (2002) Mol. Cell. Proteomics. , vol.1 , Issue.11 , pp. 845-67
    • Anderson, N.L.1    Anderson, N.G.2
  • 11
    • 1042275609 scopus 로고    scopus 로고
    • Chemical probes and tandem mass spectrometry: A strategy for the quantitative analysis of proteomes and subproteomes
    • Zhang, H.; Yan, W.; Aebersold, R. Chemical probes and tandem mass spectrometry: a strategy for the quantitative analysis of proteomes and subproteomes Curr. Opin. Chem. Biol. 2004, 8 (1) 66-75
    • (2004) Curr. Opin. Chem. Biol. , vol.8 , Issue.1 , pp. 66-75
    • Zhang, H.1    Yan, W.2    Aebersold, R.3
  • 12
    • 0032754473 scopus 로고    scopus 로고
    • On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database
    • Apweiler, R.; Hermjakob, H.; Sharon, N. On the frequency of protein glycosylation, as deduced from analysis of the SWISS-PROT database Biochim. Biophys. Acta 1999, 1473 (1) 4-8
    • (1999) Biochim. Biophys. Acta , vol.1473 , Issue.1 , pp. 4-8
    • Apweiler, R.1    Hermjakob, H.2    Sharon, N.3
  • 14
    • 0038699625 scopus 로고    scopus 로고
    • Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry
    • Zhang, H.; Li, X. J.; Martin, D. B.; Aebersold, R. Identification and quantification of N-linked glycoproteins using hydrazide chemistry, stable isotope labeling and mass spectrometry Nat. Biotechnol. 2003, 21 (6) 660-6
    • (2003) Nat. Biotechnol. , vol.21 , Issue.6 , pp. 660-6
    • Zhang, H.1    Li, X.J.2    Martin, D.B.3    Aebersold, R.4
  • 16
    • 33846488076 scopus 로고    scopus 로고
    • Shotgun glycopeptide capture approach coupled with mass spectrometry for comprehensive glycoproteomics
    • Sun, B.; Ranish, J. A.; Utleg, A. G.; White, J. T.; Yan, X.; Lin, B.; Hood, L. Shotgun glycopeptide capture approach coupled with mass spectrometry for comprehensive glycoproteomics Mol. Cell. Proteomics. 2007, 6 (1) 141-9
    • (2007) Mol. Cell. Proteomics. , vol.6 , Issue.1 , pp. 141-9
    • Sun, B.1    Ranish, J.A.2    Utleg, A.G.3    White, J.T.4    Yan, X.5    Lin, B.6    Hood, L.7
  • 18
    • 34948905277 scopus 로고    scopus 로고
    • Comparative profiling of serum glycoproteome by sequential purification of glycoproteins and 2-nitrobenzensulfenyl (NBS) stable isotope labeling: A new approach for the novel biomarker discovery for cancer
    • Ueda, K.; Katagiri, T.; Shimada, T.; Irie, S.; Sato, T. A.; Nakamura, Y.; Daigo, Y. Comparative profiling of serum glycoproteome by sequential purification of glycoproteins and 2-nitrobenzensulfenyl (NBS) stable isotope labeling: a new approach for the novel biomarker discovery for cancer J. Proteome Res. 2007, 6 (9) 3475-83
    • (2007) J. Proteome Res. , vol.6 , Issue.9 , pp. 3475-83
    • Ueda, K.1    Katagiri, T.2    Shimada, T.3    Irie, S.4    Sato, T.A.5    Nakamura, Y.6    Daigo, Y.7
  • 20
    • 37049026705 scopus 로고    scopus 로고
    • Identification of putative serum glycoprotein biomarkers for human lung adenocarcinoma by multilectin affinity chromatography and LC-MS/MS
    • Heo, S. H.; Lee, S. J.; Ryoo, H. M.; Park, J. Y.; Cho, J. Y. Identification of putative serum glycoprotein biomarkers for human lung adenocarcinoma by multilectin affinity chromatography and LC-MS/MS Proteomics 2007, 7 (23) 4292-302
    • (2007) Proteomics , vol.7 , Issue.23 , pp. 4292-302
    • Heo, S.H.1    Lee, S.J.2    Ryoo, H.M.3    Park, J.Y.4    Cho, J.Y.5
  • 22
    • 77449148857 scopus 로고    scopus 로고
    • An overview of label-free quantitation methods in proteomics by mass spectrometry
    • Wong, J. W.; Cagney, G. An overview of label-free quantitation methods in proteomics by mass spectrometry Methods Mol. Biol. 2010, 604, 273-83
    • (2010) Methods Mol. Biol. , vol.604 , pp. 273-83
    • Wong, J.W.1    Cagney, G.2
  • 23
    • 78649863611 scopus 로고    scopus 로고
    • Thermo Xcalibur raw file to mzXML converter, ReAdW version 4.2.0 was downloaded from
    • Thermo Xcalibur raw file to mzXML converter, ReAdW version 4.2.0 was downloaded from http://tools.proteomecenter.org/wiki/index.php?title=Software: ReAdW.
  • 24
    • 84936916896 scopus 로고
    • Robust locally weighted regression and smoothing scatterplots
    • Cleveland, W. S. Robust locally weighted regression and smoothing scatterplots J. Amer. Stat. Assoc. 1979, 74 (368) 829-36
    • (1979) J. Amer. Stat. Assoc. , vol.74 , Issue.368 , pp. 829-36
    • Cleveland, W.S.1
  • 25
    • 0001677717 scopus 로고
    • Controlling the false discovery rate: A practical and powerful approach to multiple testing
    • Benjamini, Y.; Hochberg, Y. Controlling the false discovery rate: a practical and powerful approach to multiple testing J. R. Stat. Soc. 1995, 57, 289-300
    • (1995) J. R. Stat. Soc. , vol.57 , pp. 289-300
    • Benjamini, Y.1    Hochberg, Y.2
  • 26
    • 0034885731 scopus 로고    scopus 로고
    • Age-dependent deamidation of asparagine residues in proteins
    • Lindner, H.; Helliger, W. Age-dependent deamidation of asparagine residues in proteins Exp. Gerontol. 2001, 36 (9) 1551-63
    • (2001) Exp. Gerontol. , vol.36 , Issue.9 , pp. 1551-63
    • Lindner, H.1    Helliger, W.2
  • 27
    • 24044523213 scopus 로고    scopus 로고
    • Site-specific glycosylation analysis of human apolipoprotein B100 using LC/ESI MS/MS
    • Harazono, A.; Kawasaki, N.; Kawanishi, T.; Hayakawa, T. Site-specific glycosylation analysis of human apolipoprotein B100 using LC/ESI MS/MS Glycobiology 2005, 15 (5) 447-62
    • (2005) Glycobiology , vol.15 , Issue.5 , pp. 447-62
    • Harazono, A.1    Kawasaki, N.2    Kawanishi, T.3    Hayakawa, T.4
  • 28
    • 68149149872 scopus 로고    scopus 로고
    • IGF-I and IGFBP-3 and the risk of lung cancer: A meta-analysis based on nested case-control studies
    • Chen, B.; Liu, S.; Xu, W.; Wang, X.; Zhao, W.; Wu, J. IGF-I and IGFBP-3 and the risk of lung cancer: a meta-analysis based on nested case-control studies J. Exp. Clin. Cancer Res. 2009, 28, 89-94
    • (2009) J. Exp. Clin. Cancer Res. , vol.28 , pp. 89-94
    • Chen, B.1    Liu, S.2    Xu, W.3    Wang, X.4    Zhao, W.5    Wu, J.6
  • 29
    • 78649888970 scopus 로고    scopus 로고
    • The networks and functional analyses were generated through the use of Ingenuity Pathways Analysis (Ingenuity Systems)
    • The networks and functional analyses were generated through the use of Ingenuity Pathways Analysis (Ingenuity Systems, www.ingenuity.com).
  • 30
    • 77950346282 scopus 로고    scopus 로고
    • Immunity, inflammation, and cancer
    • Grivennikov, S. I.; Greten, F. R.; Karin, M. Immunity, inflammation, and cancer Cell 2010, 140 (6) 883-99
    • (2010) Cell , vol.140 , Issue.6 , pp. 883-99
    • Grivennikov, S.I.1    Greten, F.R.2    Karin, M.3
  • 31
    • 29144459934 scopus 로고    scopus 로고
    • Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry
    • Liu, T.; Qian, W. J.; Gritsenko, M. A.; Camp, D. G., 2nd; Monroe, M. E.; Moore, R. J.; Smith, R. D. Human plasma N-glycoproteome analysis by immunoaffinity subtraction, hydrazide chemistry, and mass spectrometry J. Proteome Res. 2005, 4 (6) 2070-80
    • (2005) J. Proteome Res. , vol.4 , Issue.6 , pp. 2070-80
    • Liu, T.1    Qian, W.J.2    Gritsenko, M.A.3    Camp II, D.G.4    Monroe, M.E.5    Moore, R.J.6    Smith, R.D.7
  • 32
    • 33745994676 scopus 로고    scopus 로고
    • Plasma proteomics of lung cancer by a linkage of multi-dimensional liquid chromatography and two-dimensional difference gel electrophoresis
    • Okano, T.; Kondo, T.; Kakisaka, T.; Fujii, K.; Yamada, M.; Kato, H.; Nishimura, T.; Gemma, A.; Kudoh, S.; Hirohashi, S. Plasma proteomics of lung cancer by a linkage of multi-dimensional liquid chromatography and two-dimensional difference gel electrophoresis Proteomics 2006, 6 (13) 3938-48
    • (2006) Proteomics , vol.6 , Issue.13 , pp. 3938-48
    • Okano, T.1    Kondo, T.2    Kakisaka, T.3    Fujii, K.4    Yamada, M.5    Kato, H.6    Nishimura, T.7    Gemma, A.8    Kudoh, S.9    Hirohashi, S.10
  • 35
    • 33645721632 scopus 로고    scopus 로고
    • Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins
    • Anderson, L.; Hunter, C. L. Quantitative mass spectrometric multiple reaction monitoring assays for major plasma proteins Mol. Cell. Proteomics 2006, 5 (4) 573-88
    • (2006) Mol. Cell. Proteomics , vol.5 , Issue.4 , pp. 573-88
    • Anderson, L.1    Hunter, C.L.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.