Improved identification of O-linked glycopeptides from ETD data with optimized scoring for different charge states and cleavage specificities

Amino Acids

Volumn 41, Issue 2, 2011, Pages 321-328

  Darula, Zsuzsa ^a   Chalkley, Robert J ^b   Lynn, Aenoch ^b   Baker, Peter R ^b   Medzihradszky, Katalin F ^a,b  

^a INSTITUTE OF BIOCHEMISTRY   (Hungary)

^b UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Collision induced dissociation (CID); Database search; Electron transfer dissociation (ETD); Mass spectrometry; O glycosylation; O linked glycopeptides

Indexed keywords

GLYCOPEPTIDE; O LINKED GLYCOPEPTIDE; UNCLASSIFIED DRUG;

ARTICLE; COLLISIONALLY ACTIVATED DISSOCIATION; CONTROLLED STUDY; DATA ANALYSIS; ELECTRON TRANSPORT; INTERMETHOD COMPARISON; PRIORITY JOURNAL; PROTEIN ANALYSIS; PROTEIN CLEAVAGE; SCORING SYSTEM; STRUCTURAL PROTEOMICS; TANDEM MASS SPECTROMETRY;

AMINO ACID SEQUENCE; ANIMALS; CATTLE; DATA INTERPRETATION, STATISTICAL; DATABASES, PROTEIN; ELECTROCHEMISTRY; GLYCOPEPTIDES; MOLECULAR SEQUENCE DATA; PEPTIDE FRAGMENTS; SEARCH ENGINE; SERUM; TANDEM MASS SPECTROMETRY;

EID: 79960210781     PISSN: 09394451     EISSN: 14382199     Source Type: Journal    
DOI: 10.1007/s00726-010-0692-2     Document Type: Article

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