메뉴 건너뛰기




Volumn 10, Issue 1, 2014, Pages

KSHV 2.0: A Comprehensive Annotation of the Kaposi's Sarcoma-Associated Herpesvirus Genome Using Next-Generation Sequencing Reveals Novel Genomic and Functional Features

Author keywords

[No Author keywords available]

Indexed keywords

UNTRANSLATED RNA; VIRUS RNA;

EID: 84893766839     PISSN: 15537366     EISSN: 15537374     Source Type: Journal    
DOI: 10.1371/journal.ppat.1003847     Document Type: Article
Times cited : (236)

References (141)
  • 1
    • 0032981813 scopus 로고    scopus 로고
    • The role of Kaposi's sarcoma-associated herpesvirus (KSHV/HHV-8) in lymphoproliferative diseases
    • Cesarman E, Knowles DM, (1999) The role of Kaposi's sarcoma-associated herpesvirus (KSHV/HHV-8) in lymphoproliferative diseases. Seminars in cancer biology 9: 165-174.
    • (1999) Seminars in Cancer Biology , vol.9 , pp. 165-174
    • Cesarman, E.1    Knowles, D.M.2
  • 2
    • 77951192990 scopus 로고    scopus 로고
    • KSHV and the pathogenesis of Kaposi sarcoma: listening to human biology and medicine
    • Ganem D, (2010) KSHV and the pathogenesis of Kaposi sarcoma: listening to human biology and medicine. The Journal of clinical investigation 120: 939-949.
    • (2010) The Journal of Clinical Investigation , vol.120 , pp. 939-949
    • Ganem, D.1
  • 3
    • 0028588064 scopus 로고
    • Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma
    • Chang Y, Cesarman E, Pessin MS, Lee F, Culpepper J, et al. (1994) Identification of herpesvirus-like DNA sequences in AIDS-associated Kaposi's sarcoma. Science (New York, NY) pp. 1865-1869.
    • (1994) Science (New York, NY) , pp. 1865-1869
    • Chang, Y.1    Cesarman, E.2    Pessin, M.S.3    Lee, F.4    Culpepper, J.5
  • 4
    • 0000842916 scopus 로고    scopus 로고
    • Nucleotide sequence of the Kaposi sarcoma-associated herpesvirus (HHV8)
    • Russo JJ, (1996) Nucleotide sequence of the Kaposi sarcoma-associated herpesvirus (HHV8). Proceedings of the National Academy of Sciences 93: 14862-14867.
    • (1996) Proceedings of the National Academy of Sciences , vol.93 , pp. 14862-14867
    • Russo, J.J.1
  • 5
    • 84865114128 scopus 로고    scopus 로고
    • Kaposi's Sarcoma-Associated Herpesvirus microRNAs
    • Gottwein E, (2012) Kaposi's Sarcoma-Associated Herpesvirus microRNAs. Frontiers in microbiology 3: 165.
    • (2012) Frontiers in Microbiology , vol.3 , pp. 165
    • Gottwein, E.1
  • 6
    • 77955006560 scopus 로고    scopus 로고
    • The lytic transcriptome of Kaposi's sarcoma-associated herpesvirus reveals extensive transcription of noncoding regions, including regions antisense to important genes
    • Chandriani S, Xu Y, Ganem D, (2010) The lytic transcriptome of Kaposi's sarcoma-associated herpesvirus reveals extensive transcription of noncoding regions, including regions antisense to important genes. Journal of virology 84: 7934-7942.
    • (2010) Journal of Virology , vol.84 , pp. 7934-7942
    • Chandriani, S.1    Xu, Y.2    Ganem, D.3
  • 7
    • 77952003905 scopus 로고    scopus 로고
    • Making sense of antisense: seemingly noncoding RNAs antisense to the master regulator of Kaposi's sarcoma-associated herpesvirus lytic replication do not regulate that transcript but serve as mRNAs encoding small peptides
    • Xu Y, Ganem D, (2010) Making sense of antisense: seemingly noncoding RNAs antisense to the master regulator of Kaposi's sarcoma-associated herpesvirus lytic replication do not regulate that transcript but serve as mRNAs encoding small peptides. Journal of virology 84: 5465-5475.
    • (2010) Journal of Virology , vol.84 , pp. 5465-5475
    • Xu, Y.1    Ganem, D.2
  • 8
    • 84874699244 scopus 로고    scopus 로고
    • A virally encoded small peptide regulates RTA stability and facilitates Kaposi's sarcoma-associated herpesvirus lytic replication
    • Jaber T, Yuan Y, (2013) A virally encoded small peptide regulates RTA stability and facilitates Kaposi's sarcoma-associated herpesvirus lytic replication. Journal of virology 87: 3461-3470.
    • (2013) Journal of Virology , vol.87 , pp. 3461-3470
    • Jaber, T.1    Yuan, Y.2
  • 9
    • 0031883550 scopus 로고    scopus 로고
    • Transcription Mapping of the Kaposi's Sarcoma-Associated Herpesvirus (Human Herpesvirus 8) Genome in a Body Cavity-Based Lymphoma Cell Line (BC-1)
    • Sarid R, Flore O, Bohenzky RA, Chang Y, Moore PS, (1998) Transcription Mapping of the Kaposi's Sarcoma-Associated Herpesvirus (Human Herpesvirus 8) Genome in a Body Cavity-Based Lymphoma Cell Line (BC-1). J Virol 72: 1005-1012.
    • (1998) J Virol , vol.72 , pp. 1005-1012
    • Sarid, R.1    Flore, O.2    Bohenzky, R.A.3    Chang, Y.4    Moore, P.S.5
  • 10
    • 0038405070 scopus 로고    scopus 로고
    • Transcription Profile of Kaposi's Sarcoma-associated Herpesvirus in Primary Kaposi's Sarcoma Lesions as Determined by Real-Time PCR Arrays
    • Dittmer DP, (2003) Transcription Profile of Kaposi's Sarcoma-associated Herpesvirus in Primary Kaposi's Sarcoma Lesions as Determined by Real-Time PCR Arrays. Cancer Res 63: 2010-2015.
    • (2003) Cancer Res , vol.63 , pp. 2010-2015
    • Dittmer, D.P.1
  • 11
    • 83655183273 scopus 로고    scopus 로고
    • Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes
    • Dresang LR, Teuton JR, Feng H, Jacobs JM, Camp DG, et al. (2011) Coupled transcriptome and proteome analysis of human lymphotropic tumor viruses: insights on the detection and discovery of viral genes. BMC genomics 12: 625.
    • (2011) BMC Genomics , vol.12 , pp. 625
    • Dresang, L.R.1    Teuton, J.R.2    Feng, H.3    Jacobs, J.M.4    Camp, D.G.5
  • 12
    • 62549134121 scopus 로고    scopus 로고
    • Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling
    • Ingolia NT, Ghaemmaghami S, Newman JRS, Weissman JS, (2009) Genome-wide analysis in vivo of translation with nucleotide resolution using ribosome profiling. Science (New York, NY) 324: 218-223.
    • (2009) Science (New York, NY) , vol.324 , pp. 218-223
    • Ingolia, N.T.1    Ghaemmaghami, S.2    Newman, J.R.S.3    Weissman, J.S.4
  • 13
    • 84864453787 scopus 로고    scopus 로고
    • The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments
    • Ingolia NT, Brar GA, Rouskin S, McGeachy AM, Weissman JS, (2012) The ribosome profiling strategy for monitoring translation in vivo by deep sequencing of ribosome-protected mRNA fragments. Nature protocols 7: 1534-1550.
    • (2012) Nature Protocols , vol.7 , pp. 1534-1550
    • Ingolia, N.T.1    Brar, G.A.2    Rouskin, S.3    McGeachy, A.M.4    Weissman, J.S.5
  • 15
    • 0035167125 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays
    • Jenner RG, Albà MM, Boshoff C, Kellam P, (2001) Kaposi's sarcoma-associated herpesvirus latent and lytic gene expression as revealed by DNA arrays. Journal of virology 75: 891-902.
    • (2001) Journal of Virology , vol.75 , pp. 891-902
    • Jenner, R.G.1    Albà, M.M.2    Boshoff, C.3    Kellam, P.4
  • 16
    • 0035027712 scopus 로고    scopus 로고
    • Transcription program of human herpesvirus 8 (kaposi's sarcoma-associated herpesvirus)
    • Paulose-Murphy M, Ha NK, Xiang C, Chen Y, Gillim L, et al. (2001) Transcription program of human herpesvirus 8 (kaposi's sarcoma-associated herpesvirus). Journal of virology 75: 4843-4853.
    • (2001) Journal of Virology , vol.75 , pp. 4843-4853
    • Paulose-Murphy, M.1    Ha, N.K.2    Xiang, C.3    Chen, Y.4    Gillim, L.5
  • 17
    • 79955754014 scopus 로고    scopus 로고
    • Generation of a doxycycline-inducible KSHV producer cell line of endothelial origin: maintenance of tight latency with efficient reactivation upon induction
    • Myoung J, Ganem D, (2011) Generation of a doxycycline-inducible KSHV producer cell line of endothelial origin: maintenance of tight latency with efficient reactivation upon induction. Journal of virological methods 174: 12-21.
    • (2011) Journal of Virological Methods , vol.174 , pp. 12-21
    • Myoung, J.1    Ganem, D.2
  • 18
    • 3142604959 scopus 로고    scopus 로고
    • Use of the red fluorescent protein as a marker of Kaposi's sarcoma-associated herpesvirus lytic gene expression
    • Vieira J, O'Hearn PM, (2004) Use of the red fluorescent protein as a marker of Kaposi's sarcoma-associated herpesvirus lytic gene expression. Virology 325: 225-240.
    • (2004) Virology , vol.325 , pp. 225-240
    • Vieira, J.1    O'Hearn, P.M.2
  • 19
    • 77249087063 scopus 로고    scopus 로고
    • Inhibition of eukaryotic translation elongation by cycloheximide and lactimidomycin
    • Schneider-Poetsch T, Ju J, Eyler DE, Dang Y, Bhat S, et al. (2010) Inhibition of eukaryotic translation elongation by cycloheximide and lactimidomycin. Nature chemical biology 6: 209-217.
    • (2010) Nature Chemical Biology , vol.6 , pp. 209-217
    • Schneider-Poetsch, T.1    Ju, J.2    Eyler, D.E.3    Dang, Y.4    Bhat, S.5
  • 20
  • 21
    • 81055155799 scopus 로고    scopus 로고
    • Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes
    • Ingolia NT, Lareau LF, Weissman JS, (2011) Ribosome Profiling of Mouse Embryonic Stem Cells Reveals the Complexity and Dynamics of Mammalian Proteomes. Cell 147 (4) (): 789-802.
    • (2011) Cell , vol.147 , Issue.4 , pp. 789-802
    • Ingolia, N.T.1    Lareau, L.F.2    Weissman, J.S.3
  • 23
    • 78249253329 scopus 로고    scopus 로고
    • HMMSplicer: a tool for efficient and sensitive discovery of known and novel splice junctions in RNA-Seq data
    • Dimon MT, Sorber K, DeRisi JL, (2010) HMMSplicer: a tool for efficient and sensitive discovery of known and novel splice junctions in RNA-Seq data. PloS one 5: e13875.
    • (2010) PloS One , vol.5
    • Dimon, M.T.1    Sorber, K.2    DeRisi, J.L.3
  • 24
    • 0037177838 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus K8 exon 3 contains three 5′-splice sites and harbors a K8.1 transcription start site
    • Tang S, Zheng Z-M, (2002) Kaposi's sarcoma-associated herpesvirus K8 exon 3 contains three 5′-splice sites and harbors a K8.1 transcription start site. The Journal of biological chemistry 277: 14547-14556.
    • (2002) The Journal of Biological Chemistry , vol.277 , pp. 14547-14556
    • Tang, S.1    Zheng, Z.-M.2
  • 25
    • 0032530548 scopus 로고    scopus 로고
    • Human herpesvirus-8 ORF K8.1 gene encodes immunogenic glycoproteins generated by spliced transcripts
    • Chandran B, Bloomer C, Chan SR, Zhu L, Goldstein E, et al. (1998) Human herpesvirus-8 ORF K8.1 gene encodes immunogenic glycoproteins generated by spliced transcripts. Virology 249: 140-149.
    • (1998) Virology , vol.249 , pp. 140-149
    • Chandran, B.1    Bloomer, C.2    Chan, S.R.3    Zhu, L.4    Goldstein, E.5
  • 26
    • 77951042893 scopus 로고    scopus 로고
    • MochiView: versatile software for genome browsing and DNA motif analysis
    • Homann OR, Johnson AD, (2010) MochiView: versatile software for genome browsing and DNA motif analysis. BMC biology 8: 49.
    • (2010) BMC Biology , vol.8 , pp. 49
    • Homann, O.R.1    Johnson, A.D.2
  • 27
    • 0001293583 scopus 로고    scopus 로고
    • Identification of the Immediate-Early Transcripts of Kaposi's Sarcoma-Associated Herpesvirus
    • Zhu FX, Cusano T, Yuan Y, (1999) Identification of the Immediate-Early Transcripts of Kaposi's Sarcoma-Associated Herpesvirus. Journal of virology 73: 5556-5567.
    • (1999) Journal of Virology , vol.73 , pp. 5556-5567
    • Zhu, F.X.1    Cusano, T.2    Yuan, Y.3
  • 28
    • 29744456599 scopus 로고    scopus 로고
    • Transcriptional analysis of latent and inducible Kaposi's sarcoma-associated herpesvirus transcripts in the K4 to K7 region
    • Taylor JL, Bennett HN, Snyder BA, Moore PS, Chang Y, (2005) Transcriptional analysis of latent and inducible Kaposi's sarcoma-associated herpesvirus transcripts in the K4 to K7 region. Journal of virology 79: 15099-15106.
    • (2005) Journal of Virology , vol.79 , pp. 15099-15106
    • Taylor, J.L.1    Bennett, H.N.2    Snyder, B.A.3    Moore, P.S.4    Chang, Y.5
  • 32
    • 0017151271 scopus 로고
    • RNA synthesis in cells infected with herpes simplex virus. XIII. Differences in the methylation patterns of viral RNA during the reproductive cycle
    • Bartkoski M, Roizman B, (1976) RNA synthesis in cells infected with herpes simplex virus. XIII. Differences in the methylation patterns of viral RNA during the reproductive cycle. Journal of Virology 20: 583-588.
    • (1976) Journal of Virology , vol.20 , pp. 583-588
    • Bartkoski, M.1    Roizman, B.2
  • 33
    • 0029966233 scopus 로고    scopus 로고
    • Polyadenylated nuclear RNA encoded by Kaposi sarcoma-associated herpesvirus
    • Sun R, Lin S-F, Gradoville L, Miller G, (1996) Polyadenylated nuclear RNA encoded by Kaposi sarcoma-associated herpesvirus. PNAS 93: 11883-11888.
    • (1996) PNAS , vol.93 , pp. 11883-11888
    • Sun, R.1    Lin, S.-F.2    Gradoville, L.3    Miller, G.4
  • 34
    • 84887189506 scopus 로고    scopus 로고
    • Comprehensive Mapping and Analysis of Kaposi's Sarcoma-Associated Herpesvirus 3′ UTRs Identify Differential Posttranscriptional Control of Gene Expression in Lytic versus Latent Infection
    • McClure LV, Kincaid RP, Burke JM, Grundhoff A, Sullivan CS, (2013) Comprehensive Mapping and Analysis of Kaposi's Sarcoma-Associated Herpesvirus 3′ UTRs Identify Differential Posttranscriptional Control of Gene Expression in Lytic versus Latent Infection. Journal of virology 87: 12838-12849.
    • (2013) Journal of Virology , vol.87 , pp. 12838-12849
    • McClure, L.V.1    Kincaid, R.P.2    Burke, J.M.3    Grundhoff, A.4    Sullivan, C.S.5
  • 35
    • 84893750493 scopus 로고    scopus 로고
    • Genome-wide mapping and screening of KSHV 3′ UTRs identify bicistronic and polycistronic viral transcripts as frequent targets of KSHV microRNAs
    • Bai Z, Huang Y, Li W, Zhu Y, Jung JU, et al. (2013) Genome-wide mapping and screening of KSHV 3′ UTRs identify bicistronic and polycistronic viral transcripts as frequent targets of KSHV microRNAs. Journal of virology.
    • (2013) Journal of Virology
    • Bai, Z.1    Huang, Y.2    Li, W.3    Zhu, Y.4    Jung, J.U.5
  • 36
    • 84888242520 scopus 로고    scopus 로고
    • A Viral Genome Landscape of RNA Polyadenylation from KSHV Latent to Lytic Infection
    • Majerciak V, Ni T, Yang W, Meng B, Zhu J, et al. (2013) A Viral Genome Landscape of RNA Polyadenylation from KSHV Latent to Lytic Infection. PLoS pathogens 9: e1003749.
    • (2013) PLoS Pathogens , vol.9
    • Majerciak, V.1    Ni, T.2    Yang, W.3    Meng, B.4    Zhu, J.5
  • 37
    • 0017089669 scopus 로고
    • 3′ Non-coding region sequences in eukaryotic messenger RNA
    • Proudfoot NJ, Brownlee GG, (1976) 3′ Non-coding region sequences in eukaryotic messenger RNA. Nature 263: 211-214.
    • (1976) Nature , vol.263 , pp. 211-214
    • Proudfoot, N.J.1    Brownlee, G.G.2
  • 38
    • 0031015210 scopus 로고    scopus 로고
    • Characterization of ribonucleoprotein complexes containing an abundant polyadenylated nuclear RNA encoded by Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8)
    • Zhong W, Ganem D, (1997) Characterization of ribonucleoprotein complexes containing an abundant polyadenylated nuclear RNA encoded by Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8). J Virol 71: 1207-1212.
    • (1997) J Virol , vol.71 , pp. 1207-1212
    • Zhong, W.1    Ganem, D.2
  • 39
    • 84863703084 scopus 로고    scopus 로고
    • KSHV PAN RNA associates with demethylases UTX and JMJD3 to activate lytic replication through a physical interaction with the virus genome
    • Rossetto CC, Pari G, (2012) KSHV PAN RNA associates with demethylases UTX and JMJD3 to activate lytic replication through a physical interaction with the virus genome. PLoS pathogens 8: e1002680.
    • (2012) PLoS Pathogens , vol.8
    • Rossetto, C.C.1    Pari, G.2
  • 40
    • 84879969127 scopus 로고    scopus 로고
    • Ribosome Profiling Provides Evidence that Large Noncoding RNAs Do Not Encode Proteins
    • Guttman M, Russell P, Ingolia NT, Weissman JS, Lander ES, (2013) Ribosome Profiling Provides Evidence that Large Noncoding RNAs Do Not Encode Proteins. Cell 154: 240-251.
    • (2013) Cell , vol.154 , pp. 240-251
    • Guttman, M.1    Russell, P.2    Ingolia, N.T.3    Weissman, J.S.4    Lander, E.S.5
  • 41
    • 84857384562 scopus 로고    scopus 로고
    • Putatively Noncoding Transcripts Show Extensive Association with Ribosomes
    • Wilson BA, Masel J, (2011) Putatively Noncoding Transcripts Show Extensive Association with Ribosomes. Genome biology and evolution 3: 1245-1252.
    • (2011) Genome Biology and Evolution , vol.3 , pp. 1245-1252
    • Wilson, B.A.1    Masel, J.2
  • 42
    • 80053345905 scopus 로고    scopus 로고
    • SignalP 4.0: discriminating signal peptides from transmembrane regions
    • Petersen TN, Brunak S, von Heijne G, Nielsen H, (2011) SignalP 4.0: discriminating signal peptides from transmembrane regions. Nature methods 8: 785-786.
    • (2011) Nature Methods , vol.8 , pp. 785-786
    • Petersen, T.N.1    Brunak, S.2    von Heijne, G.3    Nielsen, H.4
  • 44
    • 65449181607 scopus 로고    scopus 로고
    • Posttranscriptional gene regulation in Kaposi's sarcoma-associated herpesvirus
    • Conrad NK, (2009) Posttranscriptional gene regulation in Kaposi's sarcoma-associated herpesvirus. Advances in applied microbiology 68: 241-261.
    • (2009) Advances in Applied Microbiology , vol.68 , pp. 241-261
    • Conrad, N.K.1
  • 45
    • 84865289392 scopus 로고    scopus 로고
    • The Kaposi's Sarcoma-Associated Herpesvirus ORF57 Protein and Its Multiple Roles in mRNA Biogenesis
    • Jackson BR, Noerenberg M, Whitehouse A, (2012) The Kaposi's Sarcoma-Associated Herpesvirus ORF57 Protein and Its Multiple Roles in mRNA Biogenesis. Frontiers in microbiology 3: 59.
    • (2012) Frontiers in Microbiology , vol.3 , pp. 59
    • Jackson, B.R.1    Noerenberg, M.2    Whitehouse, A.3
  • 46
    • 63849102197 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus ORF57 in viral RNA processing
    • Majerciak V, Zheng Z-M, (2009) Kaposi's sarcoma-associated herpesvirus ORF57 in viral RNA processing. Frontiers in Bioscience 14: 1516-1528.
    • (2009) Frontiers in Bioscience , vol.14 , pp. 1516-1528
    • Majerciak, V.1    Zheng, Z.-M.2
  • 48
    • 77952293063 scopus 로고    scopus 로고
    • Functions and regulation of RNA editing by ADAR deaminases
    • Nishikura K, (2010) Functions and regulation of RNA editing by ADAR deaminases. Annual review of biochemistry 79: 321-349.
    • (2010) Annual Review of Biochemistry , vol.79 , pp. 321-349
    • Nishikura, K.1
  • 49
    • 37049036590 scopus 로고    scopus 로고
    • RNA editing of the human herpesvirus 8 kaposin transcript eliminates its transforming activity and is induced during lytic replication
    • Gandy SZ, Linnstaedt SD, Muralidhar S, Cashman KA, Rosenthal LJ, et al. (2007) RNA editing of the human herpesvirus 8 kaposin transcript eliminates its transforming activity and is induced during lytic replication. Journal of virology 81: 13544-13551.
    • (2007) Journal of Virology , vol.81 , pp. 13544-13551
    • Gandy, S.Z.1    Linnstaedt, S.D.2    Muralidhar, S.3    Cashman, K.A.4    Rosenthal, L.J.5
  • 50
    • 1642271607 scopus 로고    scopus 로고
    • Lytic KSHV Infection Inhibits Host Gene Expression by Accelerating Global mRNA Turnover
    • Glaunsinger B, Ganem D, (2004) Lytic KSHV Infection Inhibits Host Gene Expression by Accelerating Global mRNA Turnover. Molecular Cell 13: 713-723.
    • (2004) Molecular Cell , vol.13 , pp. 713-723
    • Glaunsinger, B.1    Ganem, D.2
  • 51
    • 2942564430 scopus 로고    scopus 로고
    • Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence
    • Blom N, Sicheritz-Pontén T, Gupta R, Gammeltoft S, Brunak S, (2004) Prediction of post-translational glycosylation and phosphorylation of proteins from the amino acid sequence. Proteomics 4: 1633-1649.
    • (2004) Proteomics , vol.4 , pp. 1633-1649
    • Blom, N.1    Sicheritz-Pontén, T.2    Gupta, R.3    Gammeltoft, S.4    Brunak, S.5
  • 52
    • 84862786265 scopus 로고    scopus 로고
    • Ser-634 and Ser-636 of Kaposi's Sarcoma-Associated Herpesvirus RTA are Involved in Transactivation and are Potential Cdk9 Phosphorylation Sites
    • Tsai W-H, Wang P-W, Lin S-Y, Wu I-L, Ko Y-C, et al. (2012) Ser-634 and Ser-636 of Kaposi's Sarcoma-Associated Herpesvirus RTA are Involved in Transactivation and are Potential Cdk9 Phosphorylation Sites. Frontiers in microbiology 3: 60.
    • (2012) Frontiers in Microbiology , vol.3 , pp. 60
    • Tsai, W.-H.1    Wang, P.-W.2    Lin, S.-Y.3    Wu, I.-L.4    Ko, Y.-C.5
  • 53
    • 84865094730 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus ORF54/dUTPase downregulates a ligand for the NK activating receptor NKp44
    • Madrid AS, Ganem D, (2012) Kaposi's sarcoma-associated herpesvirus ORF54/dUTPase downregulates a ligand for the NK activating receptor NKp44. Journal of virology 86: 8693-8704.
    • (2012) Journal of Virology , vol.86 , pp. 8693-8704
    • Madrid, A.S.1    Ganem, D.2
  • 54
    • 0019852740 scopus 로고
    • Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes
    • Kozak M, (1981) Possible role of flanking nucleotides in recognition of the AUG initiator codon by eukaryotic ribosomes. Nucleic acids research pp. 5233-5252.
    • (1981) Nucleic Acids Research , pp. 5233-5252
    • Kozak, M.1
  • 55
    • 0030960992 scopus 로고    scopus 로고
    • Small Open Reading Frames: Beautiful Needles in the Haystack
    • Basrai MA, Hieter P, Boeke JD, (1997) Small Open Reading Frames: Beautiful Needles in the Haystack. Genome Res 7: 768-771.
    • (1997) Genome Res , vol.7 , pp. 768-771
    • Basrai, M.A.1    Hieter, P.2    Boeke, J.D.3
  • 57
    • 84875083702 scopus 로고    scopus 로고
    • Dual short upstream open reading frames control translation of a herpesviral polycistronic mRNA
    • Kronstad LM, Brulois KF, Jung JU, Glaunsinger BA, (2013) Dual short upstream open reading frames control translation of a herpesviral polycistronic mRNA. PLoS pathogens 9: e1003156.
    • (2013) PLoS Pathogens , vol.9
    • Kronstad, L.M.1    Brulois, K.F.2    Jung, J.U.3    Glaunsinger, B.A.4
  • 59
    • 0031714795 scopus 로고    scopus 로고
    • A Cluster of Latently Expressed Genes in Kaposi's Sarcoma-Associated Herpesvirus
    • Dittmer D, Lagunoff M, Renne R, Staskus K, Haase A, et al. (1998) A Cluster of Latently Expressed Genes in Kaposi's Sarcoma-Associated Herpesvirus. J Virol 72: 8309-8315.
    • (1998) J Virol , vol.72 , pp. 8309-8315
    • Dittmer, D.1    Lagunoff, M.2    Renne, R.3    Staskus, K.4    Haase, A.5
  • 60
    • 0035136288 scopus 로고    scopus 로고
    • Mechanisms governing expression of the v-FLIP gene of Kaposi's sarcoma-associated herpesvirus
    • Grundhoff A, Ganem D, (2001) Mechanisms governing expression of the v-FLIP gene of Kaposi's sarcoma-associated herpesvirus. Journal of virology 75: 1857-1863.
    • (2001) Journal of Virology , vol.75 , pp. 1857-1863
    • Grundhoff, A.1    Ganem, D.2
  • 61
    • 33845423990 scopus 로고    scopus 로고
    • Gene structure and expression of Kaposi's sarcoma-associated herpesvirus ORF56, ORF57, ORF58, and ORF59
    • Majerciak V, Yamanegi K, Zheng Z-M, (2006) Gene structure and expression of Kaposi's sarcoma-associated herpesvirus ORF56, ORF57, ORF58, and ORF59. Journal of virology 80: 11968-11981.
    • (2006) Journal of Virology , vol.80 , pp. 11968-11981
    • Majerciak, V.1    Yamanegi, K.2    Zheng, Z.-M.3
  • 62
    • 0034469501 scopus 로고    scopus 로고
    • Characterization of Human Herpesvirus 8 ORF59 Protein (PF-8) and Mapping of the Processivity and Viral DNA Polymerase-Interacting Domains
    • Chan SR, Chandran B, (2000) Characterization of Human Herpesvirus 8 ORF59 Protein (PF-8) and Mapping of the Processivity and Viral DNA Polymerase-Interacting Domains. Journal of Virology 74: 10920-10929.
    • (2000) Journal of Virology , vol.74 , pp. 10920-10929
    • Chan, S.R.1    Chandran, B.2
  • 63
    • 77954688337 scopus 로고    scopus 로고
    • The epigenetic landscape of latent Kaposi sarcoma-associated herpesvirus genomes
    • Günther T, Grundhoff A, (2010) The epigenetic landscape of latent Kaposi sarcoma-associated herpesvirus genomes. PLoS pathogens 6: e1000935.
    • (2010) PLoS Pathogens , vol.6
    • Günther, T.1    Grundhoff, A.2
  • 65
    • 80055094397 scopus 로고    scopus 로고
    • Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1
    • Covarrubias S, Gaglia MM, Kumar GR, Wong W, Jackson AO, et al. (2011) Coordinated destruction of cellular messages in translation complexes by the gammaherpesvirus host shutoff factor and the mammalian exonuclease Xrn1. PLoS pathogens 7: e1002339.
    • (2011) PLoS Pathogens , vol.7
    • Covarrubias, S.1    Gaglia, M.M.2    Kumar, G.R.3    Wong, W.4    Jackson, A.O.5
  • 66
    • 60149100371 scopus 로고    scopus 로고
    • Activation of host translational control pathways by a viral developmental switch
    • Arias C, Walsh D, Harbell J, Wilson AC, Mohr I, (2009) Activation of host translational control pathways by a viral developmental switch. PLoS pathogens 5: e1000334.
    • (2009) PLoS Pathogens , vol.5
    • Arias, C.1    Walsh, D.2    Harbell, J.3    Wilson, A.C.4    Mohr, I.5
  • 67
    • 33645554691 scopus 로고    scopus 로고
    • An essential role of ERK signalling in TPA-induced reactivation of Kaposi's sarcoma-associated herpesvirus
    • Cohen A, Brodie C, Sarid R, (2006) An essential role of ERK signalling in TPA-induced reactivation of Kaposi's sarcoma-associated herpesvirus. The Journal of general virology 87: 795-802.
    • (2006) The Journal of General Virology , vol.87 , pp. 795-802
    • Cohen, A.1    Brodie, C.2    Sarid, R.3
  • 68
    • 67649405057 scopus 로고    scopus 로고
    • Mechanism of sustained activation of ribosomal S6 kinase (RSK) and ERK by kaposi sarcoma-associated herpesvirus ORF45: multiprotein complexes retain active phosphorylated ERK AND RSK and protect them from dephosphorylation
    • Kuang E, Wu F, Zhu F, (2009) Mechanism of sustained activation of ribosomal S6 kinase (RSK) and ERK by kaposi sarcoma-associated herpesvirus ORF45: multiprotein complexes retain active phosphorylated ERK AND RSK and protect them from dephosphorylation. The Journal of biological chemistry 284: 13958-13968.
    • (2009) The Journal of Biological Chemistry , vol.284 , pp. 13958-13968
    • Kuang, E.1    Wu, F.2    Zhu, F.3
  • 71
    • 84855255195 scopus 로고    scopus 로고
    • ADARs: allies or enemies? The importance of A-to-I RNA editing in human disease: from cancer to HIV-1
    • Gallo A, Locatelli F, (2012) ADARs: allies or enemies? The importance of A-to-I RNA editing in human disease: from cancer to HIV-1. Biological reviews of the Cambridge Philosophical Society 87: 95-110.
    • (2012) Biological Reviews of the Cambridge Philosophical Society , vol.87 , pp. 95-110
    • Gallo, A.1    Locatelli, F.2
  • 73
    • 0034284532 scopus 로고    scopus 로고
    • Generation of G-to-A and C-to-U Changes in HIV-1 Transcripts by RNA Editing
    • Bourara K, (2000) Generation of G-to-A and C-to-U Changes in HIV-1 Transcripts by RNA Editing. Science 289: 1564-1566.
    • (2000) Science , vol.289 , pp. 1564-1566
    • Bourara, K.1
  • 75
    • 79955575834 scopus 로고    scopus 로고
    • An upstream ORF with non-AUG start codon is translated in vivo but dispensable for translational control of GCN4 mRNA
    • Zhang F, Hinnebusch AG, (2011) An upstream ORF with non-AUG start codon is translated in vivo but dispensable for translational control of GCN4 mRNA. Nucleic acids research 39: 3128-3140.
    • (2011) Nucleic Acids Research , vol.39 , pp. 3128-3140
    • Zhang, F.1    Hinnebusch, A.G.2
  • 77
    • 84868315457 scopus 로고    scopus 로고
    • Genome-wide search for novel human uORFs and N-terminal protein extensions using ribosomal footprinting
    • Fritsch C, Herrmann A, Nothnagel M, Szafranski K, Huse K, et al. (2012) Genome-wide search for novel human uORFs and N-terminal protein extensions using ribosomal footprinting. Genome research 22: 2208-2218.
    • (2012) Genome Research , vol.22 , pp. 2208-2218
    • Fritsch, C.1    Herrmann, A.2    Nothnagel, M.3    Szafranski, K.4    Huse, K.5
  • 79
    • 84860181797 scopus 로고    scopus 로고
    • Stringency of start codon selection modulates autoregulation of translation initiation factor eIF5
    • Loughran G, Sachs MS, Atkins JF, Ivanov IP, (2012) Stringency of start codon selection modulates autoregulation of translation initiation factor eIF5. Nucleic acids research 40: 2898-2906.
    • (2012) Nucleic Acids Research , vol.40 , pp. 2898-2906
    • Loughran, G.1    Sachs, M.S.2    Atkins, J.F.3    Ivanov, I.P.4
  • 80
    • 0034459468 scopus 로고    scopus 로고
    • Upstream Open Reading Frames as Regulators of mRNA Translation
    • Morris DR, Geballe AP, (2000) Upstream Open Reading Frames as Regulators of mRNA Translation. Molecular and Cellular Biology 20: 8635-8642.
    • (2000) Molecular and Cellular Biology , vol.20 , pp. 8635-8642
    • Morris, D.R.1    Geballe, A.P.2
  • 81
    • 0035890071 scopus 로고    scopus 로고
    • Physical evidence for distinct mechanisms of translational control by upstream open reading frames
    • Gaba A, Wang Z, Krishnamoorthy T, Hinnebusch AG, Sachs MS, (2001) Physical evidence for distinct mechanisms of translational control by upstream open reading frames. The EMBO journal 20: 6453-6463.
    • (2001) The EMBO Journal , vol.20 , pp. 6453-6463
    • Gaba, A.1    Wang, Z.2    Krishnamoorthy, T.3    Hinnebusch, A.G.4    Sachs, M.S.5
  • 82
    • 0030803256 scopus 로고    scopus 로고
    • Translational Regulation of Yeast GCN4. A window on factors that control initiator-tRNA binding to the ribosome
    • Hinnebusch AG, (1997) Translational Regulation of Yeast GCN4. A window on factors that control initiator-tRNA binding to the ribosome. Journal of Biological Chemistry 272: 21661-21664.
    • (1997) Journal of Biological Chemistry , vol.272 , pp. 21661-21664
    • Hinnebusch, A.G.1
  • 83
    • 79953224498 scopus 로고    scopus 로고
    • Phosphorylation of eIF2 facilitates ribosomal bypass of an inhibitory upstream ORF to enhance CHOP translation
    • Palam LR, Baird TD, Wek RC, (2011) Phosphorylation of eIF2 facilitates ribosomal bypass of an inhibitory upstream ORF to enhance CHOP translation. The Journal of biological chemistry 286: 10939-10949.
    • (2011) The Journal of Biological Chemistry , vol.286 , pp. 10939-10949
    • Palam, L.R.1    Baird, T.D.2    Wek, R.C.3
  • 84
    • 0032540217 scopus 로고    scopus 로고
    • Inhibition of CCAAT/Enhancer-binding Protein alpha and beta Translation by Upstream Open Reading Frames
    • Lincoln AJ, (1998) Inhibition of CCAAT/Enhancer-binding Protein alpha and beta Translation by Upstream Open Reading Frames. Journal of Biological Chemistry 273: 9552-9560.
    • (1998) Journal of Biological Chemistry , vol.273 , pp. 9552-9560
    • Lincoln, A.J.1
  • 85
    • 0028854680 scopus 로고
    • Translational inhibition by a human cytomegalovirus upstream open reading frame despite inefficient utilization of its AUG codon
    • Cao J, Geballe A, (1995) Translational inhibition by a human cytomegalovirus upstream open reading frame despite inefficient utilization of its AUG codon. J Virol 69: 1030-1036.
    • (1995) J Virol , vol.69 , pp. 1030-1036
    • Cao, J.1    Geballe, A.2
  • 86
    • 84875081587 scopus 로고    scopus 로고
    • An upstream open reading frame modulates ebola virus polymerase translation and virus replication
    • Shabman RS, Hoenen T, Groseth A, Jabado O, Binning JM, et al. (2013) An upstream open reading frame modulates ebola virus polymerase translation and virus replication. PLoS pathogens 9: e1003147.
    • (2013) PLoS Pathogens , vol.9
    • Shabman, R.S.1    Hoenen, T.2    Groseth, A.3    Jabado, O.4    Binning, J.M.5
  • 87
    • 14844364104 scopus 로고    scopus 로고
    • Translation of the first upstream ORF in the hepatitis B virus pregenomic RNA modulates translation at the core and polymerase initiation codons
    • Chen A, Kao YF, Brown CM, (2005) Translation of the first upstream ORF in the hepatitis B virus pregenomic RNA modulates translation at the core and polymerase initiation codons. Nucleic acids research 33: 1169-1181.
    • (2005) Nucleic Acids Research , vol.33 , pp. 1169-1181
    • Chen, A.1    Kao, Y.F.2    Brown, C.M.3
  • 88
    • 84859210032 scopus 로고    scopus 로고
    • Fast gapped-read alignment with Bowtie 2
    • Langmead B, Salzberg SL, (2012) Fast gapped-read alignment with Bowtie 2. Nature methods 9: 357-359.
    • (2012) Nature Methods , vol.9 , pp. 357-359
    • Langmead, B.1    Salzberg, S.L.2
  • 89
    • 0036892534 scopus 로고    scopus 로고
    • Transcriptional Regulation of the K1 Gene Product of Kaposi's Sarcoma-Associated Herpesvirus
    • Bowser BS, DeWire SM, Damania B, (2002) Transcriptional Regulation of the K1 Gene Product of Kaposi's Sarcoma-Associated Herpesvirus. Journal of Virology 76: 12574-12583.
    • (2002) Journal of Virology , vol.76 , pp. 12574-12583
    • Bowser, B.S.1    DeWire, S.M.2    Damania, B.3
  • 91
    • 79952448031 scopus 로고    scopus 로고
    • The Kaposi's sarcoma-associated herpesvirus ORF6 DNA binding protein forms long DNA-free helical protein filaments
    • Ozgur S, Damania B, Griffith J, (2011) The Kaposi's sarcoma-associated herpesvirus ORF6 DNA binding protein forms long DNA-free helical protein filaments. Journal of structural biology 174: 37-43.
    • (2011) Journal of Structural Biology , vol.174 , pp. 37-43
    • Ozgur, S.1    Damania, B.2    Griffith, J.3
  • 92
    • 26444604854 scopus 로고    scopus 로고
    • New genes from old: redeployment of dUTPase by herpesviruses
    • Davison AJ, Stow ND, (2005) New genes from old: redeployment of dUTPase by herpesviruses. Journal of virology 79: 12880-12892.
    • (2005) Journal of Virology , vol.79 , pp. 12880-12892
    • Davison, A.J.1    Stow, N.D.2
  • 94
    • 0034608951 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus encodes two proteins that block cell surface display of MHC class I chains by enhancing their endocytosis
    • Coscoy L, Ganem D, (2000) Kaposi's sarcoma-associated herpesvirus encodes two proteins that block cell surface display of MHC class I chains by enhancing their endocytosis. Proceedings of the National Academy of Sciences of the United States of America 97: 8051-8056.
    • (2000) Proceedings of the National Academy of Sciences of the United States of America , vol.97 , pp. 8051-8056
    • Coscoy, L.1    Ganem, D.2
  • 95
    • 0034959824 scopus 로고    scopus 로고
    • Transcription pattern of human herpesvirus 8 open reading frame K3 in primary effusion lymphoma and Kaposi's sarcoma
    • Rimessi P, Bonaccorsi A, Stürzl M, Fabris M, Brocca-Cofano E, et al. (2001) Transcription pattern of human herpesvirus 8 open reading frame K3 in primary effusion lymphoma and Kaposi's sarcoma. Journal of virology 75: 7161-7174.
    • (2001) Journal of Virology , vol.75 , pp. 7161-7174
    • Rimessi, P.1    Bonaccorsi, A.2    Stürzl, M.3    Fabris, M.4    Brocca-Cofano, E.5
  • 96
    • 73949088047 scopus 로고    scopus 로고
    • Wide-scale use of Notch signaling factor CSL/RBP-Jkappa in RTA-mediated activation of Kaposi's sarcoma-associated herpesvirus lytic genes
    • Persson LM, Wilson AC, (2010) Wide-scale use of Notch signaling factor CSL/RBP-Jkappa in RTA-mediated activation of Kaposi's sarcoma-associated herpesvirus lytic genes. Journal of virology 84: 1334-1347.
    • (2010) Journal of Virology , vol.84 , pp. 1334-1347
    • Persson, L.M.1    Wilson, A.C.2
  • 97
    • 0029837991 scopus 로고    scopus 로고
    • Molecular Mimicry of Human Cytokine and Cytokine Response Pathway Genes by KSHV
    • Moore PS, Boshoff C, Weiss RA, Chang Y, (1996) Molecular Mimicry of Human Cytokine and Cytokine Response Pathway Genes by KSHV. Science 274: 1739-1744.
    • (1996) Science , vol.274 , pp. 1739-1744
    • Moore, P.S.1    Boshoff, C.2    Weiss, R.A.3    Chang, Y.4
  • 98
    • 0031017578 scopus 로고    scopus 로고
    • A Bcl-2 homolog encoded by Kaposi sarcoma-associated virus, human herpesvirus 8, inhibits apoptosis but does not heterodimerize with Bax or Bak
    • Cheng EH-Y, (1997) A Bcl-2 homolog encoded by Kaposi sarcoma-associated virus, human herpesvirus 8, inhibits apoptosis but does not heterodimerize with Bax or Bak. Proceedings of the National Academy of Sciences 94: 690-694.
    • (1997) Proceedings of the National Academy of Sciences , vol.94 , pp. 690-694
    • Cheng, E.H.-Y.1
  • 99
    • 0031054439 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus encodes a functional Bcl-2 homologue
    • Sarid R, Sato T, Bohenzky RA, Russo JJ, Chang Y, (1997) Kaposi's sarcoma-associated herpesvirus encodes a functional Bcl-2 homologue. Nature Medicine 3: 293-298.
    • (1997) Nature Medicine , vol.3 , pp. 293-298
    • Sarid, R.1    Sato, T.2    Bohenzky, R.A.3    Russo, J.J.4    Chang, Y.5
  • 100
    • 0033895224 scopus 로고    scopus 로고
    • On the control of late gene expression in Kaposi's sarcoma-associated herpesvirus (human herpesvirus-8)
    • Chang J, Ganem D, (2000) On the control of late gene expression in Kaposi's sarcoma-associated herpesvirus (human herpesvirus-8). J Gen Virol 81: 2039-2047.
    • (2000) J Gen Virol , vol.81 , pp. 2039-2047
    • Chang, J.1    Ganem, D.2
  • 101
    • 33748934829 scopus 로고    scopus 로고
    • ORF18 is a transfactor that is essential for late gene transcription of a gammaherpesvirus
    • Arumugaswami V, Wu T-T, Martinez-Guzman D, Jia Q, Deng H, et al. (2006) ORF18 is a transfactor that is essential for late gene transcription of a gammaherpesvirus. Journal of virology 80: 9730-9740.
    • (2006) Journal of Virology , vol.80 , pp. 9730-9740
    • Arumugaswami, V.1    Wu, T.-T.2    Martinez-Guzman, D.3    Jia, Q.4    Deng, H.5
  • 102
    • 33745800234 scopus 로고    scopus 로고
    • Genetic organization and hypoxic activation of the Kaposi's sarcoma-associated herpesvirus ORF34-37 gene cluster
    • Haque M, Wang V, Davis DA, Zheng Z-M, Yarchoan R, (2006) Genetic organization and hypoxic activation of the Kaposi's sarcoma-associated herpesvirus ORF34-37 gene cluster. Journal of virology 80: 7037-7051.
    • (2006) Journal of Virology , vol.80 , pp. 7037-7051
    • Haque, M.1    Wang, V.2    Davis, D.A.3    Zheng, Z.-M.4    Yarchoan, R.5
  • 103
    • 37849020487 scopus 로고    scopus 로고
    • Transcriptional regulation of the open reading frame 35 encoded by Kaposi's sarcoma-associated herpesvirus
    • Masa S-R, Lando R, Sarid R, (2008) Transcriptional regulation of the open reading frame 35 encoded by Kaposi's sarcoma-associated herpesvirus. Virology 371: 14-31.
    • (2008) Virology , vol.371 , pp. 14-31
    • Masa, S.-R.1    Lando, R.2    Sarid, R.3
  • 104
    • 4644283536 scopus 로고    scopus 로고
    • ORF36 protein kinase of Kaposi's sarcoma herpesvirus activates the c-Jun N-terminal kinase signaling pathway
    • Hamza MS, Reyes RA, Izumiya Y, Wisdom R, Kung H-J, et al. (2004) ORF36 protein kinase of Kaposi's sarcoma herpesvirus activates the c-Jun N-terminal kinase signaling pathway. The Journal of biological chemistry 279: 38325-38330.
    • (2004) The Journal of Biological Chemistry , vol.279 , pp. 38325-38330
    • Hamza, M.S.1    Reyes, R.A.2    Izumiya, Y.3    Wisdom, R.4    Kung, H.-J.5
  • 105
    • 0037977766 scopus 로고    scopus 로고
    • Glycoproteins M and N of human herpesvirus 8 form a complex and inhibit cell fusion
    • Koyano S, (2003) Glycoproteins M and N of human herpesvirus 8 form a complex and inhibit cell fusion. Journal of General Virology 84: 1485-1491.
    • (2003) Journal of General Virology , vol.84 , pp. 1485-1491
    • Koyano, S.1
  • 106
    • 38849169859 scopus 로고    scopus 로고
    • Activation of p90 ribosomal S6 kinase by ORF45 of Kaposi's sarcoma-associated herpesvirus and its role in viral lytic replication
    • Kuang E, Tang Q, Maul GG, Zhu F, (2008) Activation of p90 ribosomal S6 kinase by ORF45 of Kaposi's sarcoma-associated herpesvirus and its role in viral lytic replication. Journal of virology 82: 1838-1850.
    • (2008) Journal of Virology , vol.82 , pp. 1838-1850
    • Kuang, E.1    Tang, Q.2    Maul, G.G.3    Zhu, F.4
  • 107
    • 84862817313 scopus 로고    scopus 로고
    • Positive and negative regulation in the promoter of the ORF46 gene of Kaposi's sarcoma-associated herpesvirus
    • Wang S-S, Chang P-J, Chen L-W, Chen L-Y, Hung C-H, et al. (2012) Positive and negative regulation in the promoter of the ORF46 gene of Kaposi's sarcoma-associated herpesvirus. Virus research 165: 157-169.
    • (2012) Virus Research , vol.165 , pp. 157-169
    • Wang, S.-S.1    Chang, P.-J.2    Chen, L.-W.3    Chen, L.-Y.4    Hung, C.-H.5
  • 108
    • 0035984168 scopus 로고    scopus 로고
    • Characterization of gamma2-human herpesvirus-8 glycoproteins gH and gL
    • Naranatt PP, Akula SM, Chandran B, (2002) Characterization of gamma2-human herpesvirus-8 glycoproteins gH and gL. Archives of virology 147: 1349-1370.
    • (2002) Archives of Virology , vol.147 , pp. 1349-1370
    • Naranatt, P.P.1    Akula, S.M.2    Chandran, B.3
  • 109
    • 0032567394 scopus 로고    scopus 로고
    • Reactivation of Kaposi's sarcoma-associated herpesvirus infection from latency by expression of the ORF 50 transactivator, a homolog of the EBV R protein
    • Lukac DM, Renne R, Kirshner JR, Ganem D, (1998) Reactivation of Kaposi's sarcoma-associated herpesvirus infection from latency by expression of the ORF 50 transactivator, a homolog of the EBV R protein. Virology 252: 304-312.
    • (1998) Virology , vol.252 , pp. 304-312
    • Lukac, D.M.1    Renne, R.2    Kirshner, J.R.3    Ganem, D.4
  • 110
    • 0033028564 scopus 로고    scopus 로고
    • Kaposi's sarcoma-associated herpesvirus (human herpesvirus-8) encodes a homologue of the Epstein-Barr virus bZip protein EB1
    • Gruffat H, Portes-Sentis S, Sergeant A, Manet E, (1999) Kaposi's sarcoma-associated herpesvirus (human herpesvirus-8) encodes a homologue of the Epstein-Barr virus bZip protein EB1. J Gen Virol 80: 557-561.
    • (1999) J Gen Virol , vol.80 , pp. 557-561
    • Gruffat, H.1    Portes-Sentis, S.2    Sergeant, A.3    Manet, E.4
  • 111
    • 0036889155 scopus 로고    scopus 로고
    • The Kaposi's Sarcoma-Associated Herpesvirus K12 Transcript from a Primary Effusion Lymphoma Contains Complex Repeat Elements, Is Spliced, and Initiates from a Novel Promoter
    • Li H, Komatsu T, Dezube BJ, Kaye KM, (2002) The Kaposi's Sarcoma-Associated Herpesvirus K12 Transcript from a Primary Effusion Lymphoma Contains Complex Repeat Elements, Is Spliced, and Initiates from a Novel Promoter. Journal of Virology 76: 11880-11888.
    • (2002) Journal of Virology , vol.76 , pp. 11880-11888
    • Li, H.1    Komatsu, T.2    Dezube, B.J.3    Kaye, K.M.4
  • 112
    • 20744432874 scopus 로고    scopus 로고
    • Activation of the Kaposi's sarcoma-associated herpesvirus major latency locus by the lytic switch protein RTA (ORF50)
    • Matsumura S, Fujita Y, Gomez E, Tanese N, Wilson AC, (2005) Activation of the Kaposi's sarcoma-associated herpesvirus major latency locus by the lytic switch protein RTA (ORF50). Journal of virology 79: 8493-8505.
    • (2005) Journal of Virology , vol.79 , pp. 8493-8505
    • Matsumura, S.1    Fujita, Y.2    Gomez, E.3    Tanese, N.4    Wilson, A.C.5
  • 113
    • 0032567118 scopus 로고    scopus 로고
    • Human herpesvirus-8 glycoprotein B interacts with Epstein-Barr virus (EBV) glycoprotein 110 but fails to complement the infectivity of EBV mutants
    • Pertel PE, Spear PG, Longnecker R, (1998) Human herpesvirus-8 glycoprotein B interacts with Epstein-Barr virus (EBV) glycoprotein 110 but fails to complement the infectivity of EBV mutants. Virology 251: 402-413.
    • (1998) Virology , vol.251 , pp. 402-413
    • Pertel, P.E.1    Spear, P.G.2    Longnecker, R.3
  • 114
    • 0035152285 scopus 로고    scopus 로고
    • Origin-independent assembly of Kaposi's sarcoma-associated herpesvirus DNA replication compartments in transient cotransfection assays and association with the ORF-K8 protein and cellular PML
    • Wu FY, Ahn JH, Alcendor DJ, Jang WJ, Xiao J, et al. (2001) Origin-independent assembly of Kaposi's sarcoma-associated herpesvirus DNA replication compartments in transient cotransfection assays and association with the ORF-K8 protein and cellular PML. Journal of virology 75: 1487-1506.
    • (2001) Journal of Virology , vol.75 , pp. 1487-1506
    • Wu, F.Y.1    Ahn, J.H.2    Alcendor, D.J.3    Jang, W.J.4    Xiao, J.5
  • 115
    • 65349138164 scopus 로고    scopus 로고
    • A Kaposi's Sarcoma-Associated Herpesvirus Protein That Forms Inhibitory Complexes with Type I Interferon Receptor Subunits, Jak and STAT Proteins, and Blocks Interferon-Mediated Signal Transduction
    • Bisson SA, Page A-L, Ganem D, (2009) A Kaposi's Sarcoma-Associated Herpesvirus Protein That Forms Inhibitory Complexes with Type I Interferon Receptor Subunits, Jak and STAT Proteins, and Blocks Interferon-Mediated Signal Transduction. Journal of Virology 83: 5056-5066.
    • (2009) Journal of Virology , vol.83 , pp. 5056-5066
    • Bisson, S.A.1    Page, A.-L.2    Ganem, D.3
  • 116
    • 1842292816 scopus 로고    scopus 로고
    • The protease and the assembly protein of Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8)
    • Unal A, Pray T, Lagunoff M, Pennington M, Ganem D, et al. (1997) The protease and the assembly protein of Kaposi's sarcoma-associated herpesvirus (human herpesvirus 8). J Virol 71: 7030-7038.
    • (1997) J Virol , vol.71 , pp. 7030-7038
    • Unal, A.1    Pray, T.2    Lagunoff, M.3    Pennington, M.4    Ganem, D.5
  • 117
    • 0033040349 scopus 로고    scopus 로고
    • Human Herpesvirus 8-Encoded Thymidine Kinase and Phosphotransferase Homologues Confer Sensitivity to Ganciclovir
    • Cannon JS, Hamzeh F, Moore S, Nicholas J, Ambinder RF, (1999) Human Herpesvirus 8-Encoded Thymidine Kinase and Phosphotransferase Homologues Confer Sensitivity to Ganciclovir. J Virol 73: 4786-4793.
    • (1999) J Virol , vol.73 , pp. 4786-4793
    • Cannon, J.S.1    Hamzeh, F.2    Moore, S.3    Nicholas, J.4    Ambinder, R.F.5
  • 118
    • 84859824447 scopus 로고    scopus 로고
    • ORF23 of murine gammaherpesvirus 68 is non-essential for in vitro and in vivo infection
    • Ohno S, Steer B, Sattler C, Adler H, (2012) ORF23 of murine gammaherpesvirus 68 is non-essential for in vitro and in vivo infection. The Journal of general virology 93: 1076-1080.
    • (2012) The Journal of General Virology , vol.93 , pp. 1076-1080
    • Ohno, S.1    Steer, B.2    Sattler, C.3    Adler, H.4
  • 119
    • 34249948240 scopus 로고    scopus 로고
    • Murine gammaherpesvirus 68 open reading frame 24 is required for late gene expression after DNA replication
    • Wong E, Wu T-T, Reyes N, Deng H, Sun R, (2007) Murine gammaherpesvirus 68 open reading frame 24 is required for late gene expression after DNA replication. Journal of virology 81: 6761-6764.
    • (2007) Journal of Virology , vol.81 , pp. 6761-6764
    • Wong, E.1    Wu, T.-T.2    Reyes, N.3    Deng, H.4    Sun, R.5
  • 120
    • 0035120390 scopus 로고    scopus 로고
    • Lytic replication of Kaposi's sarcoma-associated herpesvirus results in the formation of multiple capsid species: isolation and molecular characterization of A, B, and C capsids from a gammaherpesvirus
    • Nealon K, Newcomb WW, Pray TR, Craik CS, Brown JC, et al. (2001) Lytic replication of Kaposi's sarcoma-associated herpesvirus results in the formation of multiple capsid species: isolation and molecular characterization of A, B, and C capsids from a gammaherpesvirus. Journal of virology 75: 2866-2878.
    • (2001) Journal of Virology , vol.75 , pp. 2866-2878
    • Nealon, K.1    Newcomb, W.W.2    Pray, T.R.3    Craik, C.S.4    Brown, J.C.5
  • 121
    • 16244423337 scopus 로고    scopus 로고
    • The murine gammaherpesvirus 68 ORF27 gene product contributes to intercellular viral spread
    • May JS, Walker J, Colaco S, Stevenson PG, (2005) The murine gammaherpesvirus 68 ORF27 gene product contributes to intercellular viral spread. Journal of virology 79: 5059-5068.
    • (2005) Journal of Virology , vol.79 , pp. 5059-5068
    • May, J.S.1    Walker, J.2    Colaco, S.3    Stevenson, P.G.4
  • 123
    • 0031950270 scopus 로고    scopus 로고
    • Limited Transmission of Kaposi's Sarcoma-Associated Herpesvirus in Cultured Cells
    • Renne R, Blackbourn D, Whitby D, Levy J, Ganem D, (1998) Limited Transmission of Kaposi's Sarcoma-Associated Herpesvirus in Cultured Cells. J Virol 72: 5182-5188.
    • (1998) J Virol , vol.72 , pp. 5182-5188
    • Renne, R.1    Blackbourn, D.2    Whitby, D.3    Levy, J.4    Ganem, D.5
  • 124
    • 84862635814 scopus 로고    scopus 로고
    • A cluster of transcripts encoded by KSHV ORF30-33 gene locus
    • Bai Z, Zhou F, Lei X, Ma X, Lu C, et al. (2012) A cluster of transcripts encoded by KSHV ORF30-33 gene locus. Virus genes 44: 225-236.
    • (2012) Virus Genes , vol.44 , pp. 225-236
    • Bai, Z.1    Zhou, F.2    Lei, X.3    Ma, X.4    Lu, C.5
  • 125
    • 70349751724 scopus 로고    scopus 로고
    • Open reading frame 33 of a gammaherpesvirus encodes a tegument protein essential for virion morphogenesis and egress
    • Guo H, Wang L, Peng L, Zhou ZH, Deng H, (2009) Open reading frame 33 of a gammaherpesvirus encodes a tegument protein essential for virion morphogenesis and egress. Journal of virology 83: 10582-10595.
    • (2009) Journal of Virology , vol.83 , pp. 10582-10595
    • Guo, H.1    Wang, L.2    Peng, L.3    Zhou, Z.H.4    Deng, H.5
  • 126
    • 0036135707 scopus 로고    scopus 로고
    • The human herpesvirus-8 (Kaposi's sarcoma-associated herpesvirus) ORF 40/41 region encodes two distinct transcripts
    • AuCoin DP, Pari GS, (2002) The human herpesvirus-8 (Kaposi's sarcoma-associated herpesvirus) ORF 40/41 region encodes two distinct transcripts. J Gen Virol 83: 189-193.
    • (2002) J Gen Virol , vol.83 , pp. 189-193
    • AuCoin, D.P.1    Pari, G.S.2
  • 127
    • 84863171015 scopus 로고    scopus 로고
    • Distinct domains in ORF52 tegument protein mediate essential functions in murine gammaherpesvirus 68 virion tegumentation and secondary envelopment
    • Wang L, Guo H, Reyes N, Lee S, Bortz E, et al. (2012) Distinct domains in ORF52 tegument protein mediate essential functions in murine gammaherpesvirus 68 virion tegumentation and secondary envelopment. Journal of virology 86: 1348-1357.
    • (2012) Journal of Virology , vol.86 , pp. 1348-1357
    • Wang, L.1    Guo, H.2    Reyes, N.3    Lee, S.4    Bortz, E.5
  • 128
    • 33947390379 scopus 로고    scopus 로고
    • Direct visualization of the putative portal in the Kaposi's sarcoma-associated herpesvirus capsid by cryoelectron tomography
    • Deng B, O'Connor CM, Kedes DH, Zhou ZH, (2007) Direct visualization of the putative portal in the Kaposi's sarcoma-associated herpesvirus capsid by cryoelectron tomography. Journal of virology 81: 3640-3644.
    • (2007) Journal of Virology , vol.81 , pp. 3640-3644
    • Deng, B.1    O'Connor, C.M.2    Kedes, D.H.3    Zhou, Z.H.4
  • 129
    • 35348826721 scopus 로고    scopus 로고
    • Murine gammaherpesvirus 68 ORF52 encodes a tegument protein required for virion morphogenesis in the cytoplasm
    • Bortz E, Wang L, Jia Q, Wu T-T, Whitelegge JP, et al. (2007) Murine gammaherpesvirus 68 ORF52 encodes a tegument protein required for virion morphogenesis in the cytoplasm. Journal of virology 81: 10137-10150.
    • (2007) Journal of Virology , vol.81 , pp. 10137-10150
    • Bortz, E.1    Wang, L.2    Jia, Q.3    Wu, T.-T.4    Whitelegge, J.P.5
  • 130
    • 0038315187 scopus 로고    scopus 로고
    • Transcription mapping of human herpesvirus 8 genes encoding viral interferon regulatory factors
    • Cunningham C, (2003) Transcription mapping of human herpesvirus 8 genes encoding viral interferon regulatory factors. Journal of General Virology 84: 1471-1483.
    • (2003) Journal of General Virology , vol.84 , pp. 1471-1483
    • Cunningham, C.1
  • 131
    • 0030891412 scopus 로고    scopus 로고
    • Identification, expression, and immunogenicity of Kaposi's sarcoma- associated herpesvirus-encoded small viral capsid antigen
    • Lin S, Sun R, Heston L, Gradoville L, Shedd D, et al. (1997) Identification, expression, and immunogenicity of Kaposi's sarcoma- associated herpesvirus-encoded small viral capsid antigen. J Virol 71: 3069-3076.
    • (1997) J Virol , vol.71 , pp. 3069-3076
    • Lin, S.1    Sun, R.2    Heston, L.3    Gradoville, L.4    Shedd, D.5
  • 132
    • 65049087884 scopus 로고    scopus 로고
    • Recombinant ORF66 and ORFK12 antigens for the detection of human herpesvirus 8 antibodies in HIV-positive and -negative patients
    • Yang T-C, Chang C-P, Lan Y-C, Liu C-L, Shih M-C, et al. (2009) Recombinant ORF66 and ORFK12 antigens for the detection of human herpesvirus 8 antibodies in HIV-positive and-negative patients. Biotechnology letters 31: 629-637.
    • (2009) Biotechnology Letters , vol.31 , pp. 629-637
    • Yang, T.-C.1    Chang, C.-P.2    Lan, Y.-C.3    Liu, C.-L.4    Shih, M.-C.5
  • 133
    • 84855961718 scopus 로고    scopus 로고
    • Reconstitution of the Kaposi's sarcoma-associated herpesvirus nuclear egress complex and formation of nuclear membrane vesicles by coexpression of ORF67 and ORF69 gene products
    • Desai PJ, Pryce EN, Henson BW, Luitweiler EM, Cothran J, (2012) Reconstitution of the Kaposi's sarcoma-associated herpesvirus nuclear egress complex and formation of nuclear membrane vesicles by coexpression of ORF67 and ORF69 gene products. Journal of virology 86: 594-598.
    • (2012) Journal of Virology , vol.86 , pp. 594-598
    • Desai, P.J.1    Pryce, E.N.2    Henson, B.W.3    Luitweiler, E.M.4    Cothran, J.5
  • 134
    • 42449094941 scopus 로고    scopus 로고
    • Identification and characterization of the product encoded by ORF69 of Kaposi's sarcoma-associated herpesvirus
    • Santarelli R, Farina A, Granato M, Gonnella R, Raffa S, et al. (2008) Identification and characterization of the product encoded by ORF69 of Kaposi's sarcoma-associated herpesvirus. Journal of virology 82: 4562-4572.
    • (2008) Journal of Virology , vol.82 , pp. 4562-4572
    • Santarelli, R.1    Farina, A.2    Granato, M.3    Gonnella, R.4    Raffa, S.5
  • 135
    • 0035881482 scopus 로고    scopus 로고
    • Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas
    • Nador RG, Milligan LL, Flore O, Wang X, Arvanitakis L, et al. (2001) Expression of Kaposi's sarcoma-associated herpesvirus G protein-coupled receptor monocistronic and bicistronic transcripts in primary effusion lymphomas. Virology 287: 62-70.
    • (2001) Virology , vol.287 , pp. 62-70
    • Nador, R.G.1    Milligan, L.L.2    Flore, O.3    Wang, X.4    Arvanitakis, L.5
  • 136
    • 11144222534 scopus 로고    scopus 로고
    • Virion proteins of Kaposi's sarcoma-associated herpesvirus
    • Zhu FX, Chong JM, Wu L, Yuan Y, (2005) Virion proteins of Kaposi's sarcoma-associated herpesvirus. Journal of virology 79: 800-811.
    • (2005) Journal of Virology , vol.79 , pp. 800-811
    • Zhu, F.X.1    Chong, J.M.2    Wu, L.3    Yuan, Y.4
  • 137
    • 0034007479 scopus 로고    scopus 로고
    • Dihydrofolate reductase from Kaposi's sarcoma-associated herpesvirus
    • Cinquina CC, Grogan E, Sun R, Lin SF, Beardsley GP, et al. (2000) Dihydrofolate reductase from Kaposi's sarcoma-associated herpesvirus. Virology 268: 201-217.
    • (2000) Virology , vol.268 , pp. 201-217
    • Cinquina, C.C.1    Grogan, E.2    Sun, R.3    Lin, S.F.4    Beardsley, G.P.5
  • 139
    • 33644762966 scopus 로고    scopus 로고
    • Identification and characterization of the Orf49 protein of Kaposi's sarcoma-associated herpesvirus
    • González CM, Wong EL, Bowser BS, Hong GK, Kenney S, et al. (2006) Identification and characterization of the Orf49 protein of Kaposi's sarcoma-associated herpesvirus. Journal of virology 80: 3062-3070.
    • (2006) Journal of Virology , vol.80 , pp. 3062-3070
    • González, C.M.1    Wong, E.L.2    Bowser, B.S.3    Hong, G.K.4    Kenney, S.5
  • 141
    • 31144466332 scopus 로고    scopus 로고
    • Transcriptional regulation of the Kaposi's sarcoma-associated herpesvirus K15 gene
    • Wong EL, Damania B, (2006) Transcriptional regulation of the Kaposi's sarcoma-associated herpesvirus K15 gene. Journal of virology 80: 1385-1392.
    • (2006) Journal of Virology , vol.80 , pp. 1385-1392
    • Wong, E.L.1    Damania, B.2


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.