-
1
-
-
0025183708
-
Basic local alignment search tool
-
Altschul SF, Gish W, Miller W, Myers EW, Lipman DJ. 1990. Basic local alignment search tool. J Mol Biol. 215:403-410.
-
(1990)
J Mol Biol.
, vol.215
, pp. 403-410
-
-
Altschul, S.F.1
Gish, W.2
Miller, W.3
Myers, E.W.4
Lipman, D.J.5
-
2
-
-
0030801002
-
Gapped BLAST and PSI-BLAST: A new generation of protein database search programs
-
Altschul SF, et al. 1997. Gapped BLAST and PSI-BLAST: a new generation of protein database search programs. Nucleic Acids Res. 25(17):3389-3402.
-
(1997)
Nucleic Acids Res.
, vol.25
, Issue.17
, pp. 3389-3402
-
-
Altschul, S.F.1
-
3
-
-
40349094838
-
The interferon response inhibits HIV particle production by induction of TRIM22
-
Barr SD, Smiley JR, Bushman FD. 2008. The interferon response inhibits HIV particle production by induction of TRIM22. PLoS Pathog. 4:e1000007.
-
(2008)
PLoS Pathog.
, vol.4
-
-
Barr, S.D.1
Smiley, J.R.2
Bushman, F.D.3
-
4
-
-
79960396329
-
Modulation of TRIM5alpha activity in human cells by alternatively spliced TRIM5 isoforms
-
Battivelli E, et al. 2011. Modulation of TRIM5alpha activity in human cells by alternatively spliced TRIM5 isoforms. J Virol. 85:7828-7835.
-
(2011)
J Virol.
, vol.85
, pp. 7828-7835
-
-
Battivelli, E.1
-
5
-
-
36048988832
-
Novel TRIM5 isoforms expressed by Macaca nemestrina
-
Brennan G, Kozyrev Y, Kodama T, Hu SL. 2007. Novel TRIM5 isoforms expressed by Macaca nemestrina. J Virol. 81:12210-12217.
-
(2007)
J Virol.
, vol.81
, pp. 12210-12217
-
-
Brennan, G.1
Kozyrev, Y.2
Kodama, T.3
Hu, S.L.4
-
6
-
-
62849103646
-
Human TRIM gene expression in response to interferons
-
Carthagena L, et al. 2009. Human TRIM gene expression in response to interferons. PLoS One 4:e4894.
-
(2009)
PLoS One
, vol.4
-
-
Carthagena, L.1
-
7
-
-
84867647908
-
Rules of engagement: Molecular insights from host-virus arms races
-
Daugherty M, Malik H. 2012. Rules of engagement: molecular insights from host-virus arms races. Annu Rev Genet. 46:675-698.
-
(2012)
Annu Rev Genet.
, vol.46
, pp. 675-698
-
-
Daugherty, M.1
Malik, H.2
-
8
-
-
77957233168
-
Datamonkey 2010: A suite of phylogenetic analysis tools for evolutionary biology
-
Delport W, Poon AF, Frost SD, Kosakovsky Pond SL. 2010. Datamonkey 2010: a suite of phylogenetic analysis tools for evolutionary biology. Bioinformatics 26:2455-2457.
-
(2010)
Bioinformatics
, vol.26
, pp. 2455-2457
-
-
Delport, W.1
Poon, A.F.2
Frost, S.D.3
Kosakovsky Pond, S.L.4
-
9
-
-
84866740475
-
Evolutionary conflicts between viruses and restriction factors shape immunity
-
Duggal NK, Emerman M. 2012. Evolutionary conflicts between viruses and restriction factors shape immunity. Nat Rev Immunol. 12:687-695.
-
(2012)
Nat Rev Immunol.
, vol.12
, pp. 687-695
-
-
Duggal, N.K.1
Emerman, M.2
-
10
-
-
78049513711
-
Hare TRIM5a restricts divergent retroviruses and exhibits significant sequence variation from closely related lagomorpha TRIM5 genes
-
Fletcher AJ, Hué S, Schaller T, Pillay D, Towers GJ. 2010. Hare TRIM5a restricts divergent retroviruses and exhibits significant sequence variation from closely related lagomorpha TRIM5 genes. J Virol. 84:12463-12468.
-
(2010)
J Virol.
, vol.84
, pp. 12463-12468
-
-
Fletcher, A.J.1
Hué, S.2
Schaller, T.3
Pillay, D.4
Towers, G.J.5
-
12
-
-
34247341367
-
TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-I-mediated antiviral activity
-
Gack MU, et al. 2007. TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-I-mediated antiviral activity. Nature 446:916-920.
-
(2007)
Nature
, vol.446
, pp. 916-920
-
-
Gack, M.U.1
-
13
-
-
65549164536
-
Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade recognition by the host viral RNA sensor RIG-I
-
Gack MU, et al. 2009. Influenza A virus NS1 targets the ubiquitin ligase TRIM25 to evade recognition by the host viral RNA sensor RIG-I. Cell Host Microbe. 5:439-449.
-
(2009)
Cell Host Microbe.
, vol.5
, pp. 439-449
-
-
Gack, M.U.1
-
14
-
-
84885879561
-
Hexagonal assembly of a restricting TRIM5alpha protein
-
Ganser-Pornillos BK, et al. 2011. Hexagonal assembly of a restricting TRIM5alpha protein. Proc Natl Acad Sci U S A. 108:534-539.
-
(2011)
Proc Natl Acad Sci U S A.
, vol.108
, pp. 534-539
-
-
Ganser-Pornillos, B.K.1
-
15
-
-
10944260126
-
Retrovirus restriction factors
-
Goff SP. 2004. Retrovirus restriction factors. Mol Cell. 16:849-859.
-
(2004)
Mol Cell.
, vol.16
, pp. 849-859
-
-
Goff, S.P.1
-
16
-
-
77950806408
-
New algorithms and methods to estimate maximum-likelihood phylogenies: Assessing the performance of PhyML 3.0
-
Guindon S, et al. 2010. New algorithms and methods to estimate maximum-likelihood phylogenies: assessing the performance of PhyML 3.0. Syst Biol. 59:307-321.
-
(2010)
Syst Biol.
, vol.59
, pp. 307-321
-
-
Guindon, S.1
-
17
-
-
84855272528
-
Identification of a genomic reservoir for new TRIM genes in primate genomes
-
Han K, Lou DI, Sawyer SL. 2011. Identification of a genomic reservoir for new TRIM genes in primate genomes. PLoS Genet. 7:e1002388.
-
(2011)
PLoS Genet.
, vol.7
-
-
Han, K.1
Lou, D.I.2
Sawyer, S.L.3
-
18
-
-
33749642641
-
Generation of simian-tropic HIV-1 by restriction factor evasion
-
Hatziioannou T, et al. 2006. Generation of simian-tropic HIV-1 by restriction factor evasion. Science 314:95.
-
(2006)
Science
, vol.314
, pp. 95
-
-
Hatziioannou, T.1
-
19
-
-
38649092410
-
Dendroscope: An interactive viewer for large phylogenetic trees
-
Huson DH, et al. 2007. Dendroscope: An interactive viewer for large phylogenetic trees. BMC Bioinformatics 8:460.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 460
-
-
Huson, D.H.1
-
20
-
-
34447335278
-
Structural basis for PRYSPRY-mediated tripartite motif (TRIM) protein function
-
James LC, Keeble AH, Khan Z, Rhodes DA, Trowsdale J. 2007. Structural basis for PRYSPRY-mediated tripartite motif (TRIM) protein function. Proc Natl Acad Sci U S A. 104:6200-6205.
-
(2007)
Proc Natl Acad Sci U S A.
, vol.104
, pp. 6200-6205
-
-
James, L.C.1
Keeble, A.H.2
Khan, Z.3
Rhodes, D.A.4
Trowsdale, J.5
-
21
-
-
62149112938
-
Molecular evolution of the antiretroviral TRIM5 gene
-
Johnson WE, Sawyer SL. 2009. Molecular evolution of the antiretroviral TRIM5 gene. Immunogenetics 61:163-176.
-
(2009)
Immunogenetics
, vol.61
, pp. 163-176
-
-
Johnson, W.E.1
Sawyer, S.L.2
-
22
-
-
80052289447
-
Regulation of innate immune signalling pathways by the tripartite motif (TRIM) family proteins
-
Kawai T, Akira S. 2011. Regulation of innate immune signalling pathways by the tripartite motif (TRIM) family proteins. EMBO Mol Med. 3:513-527.
-
(2011)
EMBO Mol Med.
, vol.3
, pp. 513-527
-
-
Kawai, T.1
Akira, S.2
-
23
-
-
0036226603
-
BLAT-the BLAST-like alignment tool
-
Kent WJ. 2002. BLAT-the BLAST-like alignment tool. Genome Res. 12:656-664.
-
(2002)
Genome Res.
, vol.12
, pp. 656-664
-
-
Kent, W.J.1
-
24
-
-
0036079158
-
The human genome browser at UCSC
-
Kent WJ, et al. 2002. The human genome browser at UCSC. Genome Res. 12:996-1006.
-
(2002)
Genome Res.
, vol.12
, pp. 996-1006
-
-
Kent, W.J.1
-
25
-
-
77956832938
-
TRIM5 suppresses cross-species transmission of a primate immunodeficiency virus and selects for emergence of resistant variants in the new species
-
Kirmaier A, et al. 2010. TRIM5 suppresses cross-species transmission of a primate immunodeficiency virus and selects for emergence of resistant variants in the new species. PLoS Biol. 8:e1000462.
-
(2010)
PLoS Biol.
, vol.8
-
-
Kirmaier, A.1
-
26
-
-
77954798091
-
Diversifying selection and functional analysis of interleukin-4 suggests antagonism-driven evolution at receptorbinding interfaces
-
Koyanagi M, et al. 2010. Diversifying selection and functional analysis of interleukin-4 suggests antagonism-driven evolution at receptorbinding interfaces. BMC Evol Biol. 10:223.
-
(2010)
BMC Evol Biol.
, vol.10
, pp. 223
-
-
Koyanagi, M.1
-
27
-
-
45749088128
-
Primate lentivirus capsid sensitivity to TRIM5 proteins
-
Kratovac Z, et al. 2008. Primate lentivirus capsid sensitivity to TRIM5 proteins. J Virol. 82:6772-6777.
-
(2008)
J Virol.
, vol.82
, pp. 6772-6777
-
-
Kratovac, Z.1
-
28
-
-
36448991500
-
Clustal W and Clustal X version 2.0
-
Larkin MA, et al. 2007. Clustal W and Clustal X version 2.0. Bioinformatics 23:2947-2948.
-
(2007)
Bioinformatics
, vol.23
, pp. 2947-2948
-
-
Larkin, M.A.1
-
29
-
-
77953769672
-
Ancient adaptive evolution of tetherin shaped the functions of Vpu and Nef in human immunodeficiency virus and primate lentiviruses
-
Lim ES, Malik HS, Emerman M. 2010. Ancient adaptive evolution of tetherin shaped the functions of Vpu and Nef in human immunodeficiency virus and primate lentiviruses. J Virol. 84:7124-7134.
-
(2010)
J Virol.
, vol.84
, pp. 7124-7134
-
-
Lim, E.S.1
Malik, H.S.2
Emerman, M.3
-
30
-
-
0030271515
-
Coiled coils: New structures and new functions
-
Lupas A. 1996. Coiled coils: new structures and new functions. Trends Biochem Sci. 21(10):375-382.
-
(1996)
Trends Biochem Sci.
, vol.21
, Issue.10
, pp. 375-382
-
-
Lupas, A.1
-
31
-
-
77952006565
-
The specificity of TRIM5 alpha-mediated restriction is influenced by its coiled-coil domain
-
Maillard PV, Ecco G, Ortiz M, Trono D. 2010. The specificity of TRIM5 alpha-mediated restriction is influenced by its coiled-coil domain. J Virol. 84:5790-5801.
-
(2010)
J Virol.
, vol.84
, pp. 5790-5801
-
-
Maillard, P.V.1
Ecco, G.2
Ortiz, M.3
Trono, D.4
-
32
-
-
78650542340
-
Antibodies mediate intracellular immunity through tripartite motif-containing 21 (TRIM21)
-
Mallery DL, et al. 2010. Antibodies mediate intracellular immunity through tripartite motif-containing 21 (TRIM21). Proc Natl Acad Sci U S A. 107:19985-19990.
-
(2010)
Proc Natl Acad Sci U S A.
, vol.107
, pp. 19985-19990
-
-
Mallery, D.L.1
-
33
-
-
13444262384
-
CDD: A Conserved Domain Database for protein classification
-
Marchler-Bauer A, et al. 2005. CDD: a Conserved Domain Database for protein classification. Nucleic Acids Res. 33:D192-D196.
-
(2005)
Nucleic Acids Res.
, vol.33
-
-
Marchler-Bauer, A.1
-
34
-
-
30044451756
-
The SPRY domain of SSB-2 adopts a novel fold that presents conserved Par-4-binding residues
-
Masters SL, et al. 2006. The SPRY domain of SSB-2 adopts a novel fold that presents conserved Par-4-binding residues. Nat Struct Mol Biol. 13(1):77-84.
-
(2006)
Nat Struct Mol Biol.
, vol.13
, Issue.1
, pp. 77-84
-
-
Masters, S.L.1
-
35
-
-
67749118307
-
Truncation of TRIM5 in the Feliformia explains the absence of retroviral restriction in cells of the domestic cat
-
McEwan WA, et al. 2009. Truncation of TRIM5 in the Feliformia explains the absence of retroviral restriction in cells of the domestic cat. J Virol. 83:8270-8275.
-
(2009)
J Virol.
, vol.83
, pp. 8270-8275
-
-
McEwan, W.A.1
-
36
-
-
0034044314
-
The PSIPRED protein structure prediction server
-
McGuffin LJ, Bryson K, Jones DT. 2000. The PSIPRED protein structure prediction server. Bioinformatics 16(4):404-405.
-
(2000)
Bioinformatics
, vol.16
, Issue.4
, pp. 404-405
-
-
McGuffin, L.J.1
Bryson, K.2
Jones, D.T.3
-
38
-
-
80055070300
-
Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification
-
Meredith RW, et al. 2011. Impacts of the Cretaceous Terrestrial Revolution and KPg extinction on mammal diversification. Science 334:521-524.
-
(2011)
Science
, vol.334
, pp. 521-524
-
-
Meredith, R.W.1
-
39
-
-
30444452500
-
TRIM/RBCC, a novel class of 'single protein RING finger' E3 ubiquitin ligases
-
Meroni G, Diez-Roux G. 2005. TRIM/RBCC, a novel class of 'single protein RING finger' E3 ubiquitin ligases. Bioessays 27:1147-1157.
-
(2005)
Bioessays
, vol.27
, pp. 1147-1157
-
-
Meroni, G.1
Diez-Roux, G.2
-
40
-
-
79957868276
-
Two-stepping through time: Mammals and viruses
-
Meyerson NR, Sawyer SL. 2011. Two-stepping through time: mammals and viruses. Trends Microbiol. 19:286-294.
-
(2011)
Trends Microbiol.
, vol.19
, pp. 286-294
-
-
Meyerson, N.R.1
Sawyer, S.L.2
-
41
-
-
27244444559
-
TRIM family proteins: Retroviral restriction and antiviral defence
-
Nisole S, Stoye JP, Saib A. 2005. TRIM family proteins: retroviral restriction and antiviral defence. Nat Rev Microbiol. 3:799-808.
-
(2005)
Nat Rev Microbiol.
, vol.3
, pp. 799-808
-
-
Nisole, S.1
Stoye, J.P.2
Saib, A.3
-
42
-
-
33645141552
-
Patterns of evolution of host proteins involved in retroviral pathogenesis
-
Ortiz M, Bleiber G, Martinez R, Kaessmann H, Telenti A. 2006. Patterns of evolution of host proteins involved in retroviral pathogenesis. Retrovirology 3:11.
-
(2006)
Retrovirology
, vol.3
, pp. 11
-
-
Ortiz, M.1
Bleiber, G.2
Martinez, R.3
Kaessmann, H.4
Telenti, A.5
-
43
-
-
54949126675
-
TRIM family proteins and their emerging roles in innate immunity
-
Ozato K, Shin DM, Chang TH, Morse HC. 2008. TRIM family proteins and their emerging roles in innate immunity. Nat Rev Immunol. 8:849-860.
-
(2008)
Nat Rev Immunol.
, vol.8
, pp. 849-860
-
-
Ozato, K.1
Shin, D.M.2
Chang, T.H.3
Morse, H.C.4
-
44
-
-
33144459420
-
Retroviral restriction factors Fv1 and TRIM5alpha act independently and can compete for incoming virus before reverse transcription
-
Passerini LD, Keckesova Z, Towers GJ. 2006. Retroviral restriction factors Fv1 and TRIM5alpha act independently and can compete for incoming virus before reverse transcription. J Virol. 80:2100-2105.
-
(2006)
J Virol.
, vol.80
, pp. 2100-2105
-
-
Passerini, L.D.1
Keckesova, Z.2
Towers, G.J.3
-
45
-
-
84858960202
-
Convergent evolution of escape from hepaciviral antagonism in primates
-
Patel MR, Loo YM, Horner SM, Gale M Jr, Malik HS. 2012. Convergent evolution of escape from hepaciviral antagonism in primates. PLoS Biol. 10:e1001282.
-
(2012)
PLoS Biol.
, vol.10
-
-
Patel, M.R.1
Loo, Y.M.2
Horner, S.M.3
Gale Jr., M.4
Malik, H.S.5
-
46
-
-
79953755778
-
A molecular phylogeny of living primates
-
Perelman P, et al. 2011. A molecular phylogeny of living primates. PLoS Genet. 7:e1001342.
-
(2011)
PLoS Genet.
, vol.7
-
-
Perelman, P.1
-
47
-
-
79955377543
-
TRIM5 is an innate immune sensor for the retrovirus capsid lattice
-
Pertel T, et al. 2011. TRIM5 is an innate immune sensor for the retrovirus capsid lattice. Nature 472:361-365.
-
(2011)
Nature
, vol.472
, pp. 361-365
-
-
Pertel, T.1
-
48
-
-
79955388914
-
Unique spectrum of activity of prosimian TRIM5{alpha} against exogenous and endogenous retroviruses
-
Rahm N, et al. 2011. Unique spectrum of activity of prosimian TRIM5{alpha} against exogenous and endogenous retroviruses. J Virol. 85(9):4173-4183.
-
(2011)
J Virol.
, vol.85
, Issue.9
, pp. 4173-4183
-
-
Rahm, N.1
-
49
-
-
17744371839
-
The tripartite motif family identifies cell compartments
-
Reymond A, et al. 2001. The tripartite motif family identifies cell compartments. EMBO J. 20:2140-2151.
-
(2001)
EMBO J.
, vol.20
, pp. 2140-2151
-
-
Reymond, A.1
-
50
-
-
37849007655
-
Discordant evolution of the adjacent antiretroviral genes TRIM22 and TRIM5 in mammals
-
Sawyer SL, Emerman M, Malik HS. 2007. Discordant evolution of the adjacent antiretroviral genes TRIM22 and TRIM5 in mammals. PLoS Pathog. 3:e197.
-
(2007)
PLoS Pathog.
, vol.3
-
-
Sawyer, S.L.1
Emerman, M.2
Malik, H.S.3
-
51
-
-
30044432359
-
High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans
-
Sawyer SL, Wu LI, Akey JM, Emerman M, Malik HS. 2006. High-frequency persistence of an impaired allele of the retroviral defense gene TRIM5alpha in humans. Curr Biol. 16:95-100.
-
(2006)
Curr Biol.
, vol.16
, pp. 95-100
-
-
Sawyer, S.L.1
Wu, L.I.2
Akey, J.M.3
Emerman, M.4
Malik, H.S.5
-
52
-
-
14544281087
-
Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain
-
Sawyer SL, Wu LI, Emerman M, Malik HS. 2005. Positive selection of primate TRIM5alpha identifies a critical species-specific retroviral restriction domain. Proc Natl Acad Sci U S A. 102:2832-2837.
-
(2005)
Proc Natl Acad Sci U S A.
, vol.102
, pp. 2832-2837
-
-
Sawyer, S.L.1
Wu, L.I.2
Emerman, M.3
Malik, H.S.4
-
53
-
-
35448996163
-
An active TRIM5 protein in rabbits indicates a common antiviral ancestor for mammalian TRIM5 proteins
-
Schaller T, Hue S, Towers GJ. 2007. An active TRIM5 protein in rabbits indicates a common antiviral ancestor for mammalian TRIM5 proteins. J Virol. 81:11713-11721.
-
(2007)
J Virol.
, vol.81
, pp. 11713-11721
-
-
Schaller, T.1
Hue, S.2
Towers, G.J.3
-
54
-
-
0033957469
-
SMART: A webbased tool for the study of genetically mobile domains
-
Schultz J, Copley RR, Doerks T, Ponting CP, Bork P. 2000. SMART: a webbased tool for the study of genetically mobile domains. Nucleic Acids Res. 28(1):231-234.
-
(2000)
Nucleic Acids Res.
, vol.28
, Issue.1
, pp. 231-234
-
-
Schultz, J.1
Copley, R.R.2
Doerks, T.3
Ponting, C.P.4
Bork, P.5
-
55
-
-
27344435418
-
TRIM5alpha selectively binds a restriction-sensitive retroviral capsid
-
Sebastian S, Luban J. 2005. TRIM5alpha selectively binds a restriction-sensitive retroviral capsid. Retrovirology 2:40.
-
(2005)
Retrovirology
, vol.2
, pp. 40
-
-
Sebastian, S.1
Luban, J.2
-
56
-
-
0033135464
-
Protein fold analysis of the B30.2-like domain
-
Seto MH, Liu HL, Zajchowski DA, Whitlow M. 1999. Protein fold analysis of the B30.2-like domain. Proteins 35(2):235-249.
-
(1999)
Proteins
, vol.35
, Issue.2
, pp. 235-249
-
-
Seto, M.H.1
Liu, H.L.2
Zajchowski, D.A.3
Whitlow, M.4
-
57
-
-
33646556096
-
Evolution of a cytoplasmic tripartite motif (TRIM) protein in cows that restricts retroviral infection
-
Si Z, et al. 2006. Evolution of a cytoplasmic tripartite motif (TRIM) protein in cows that restricts retroviral infection. Proc Natl Acad Sci U S A. 103:7454-7459.
-
(2006)
Proc Natl Acad Sci U S A.
, vol.103
, pp. 7454-7459
-
-
Si, Z.1
-
58
-
-
10944259799
-
The B30.2 (SPRY) domain of the retroviral restriction factor TRIM5alpha exhibits lineage-specific length and sequence variation in primates
-
Song B, Gold B, et al. 2005. The B30.2 (SPRY) domain of the retroviral restriction factor TRIM5alpha exhibits lineage-specific length and sequence variation in primates. J Virol. 79:6111-6121.
-
(2005)
J Virol.
, vol.79
, pp. 6111-6121
-
-
Song, B.1
Gold, B.2
-
59
-
-
15244346957
-
Retrovirus restriction by TRIM5alpha variants from Old World and New World primates
-
Song B, Javanbakht H, et al. 2005. Retrovirus restriction by TRIM5alpha variants from Old World and New World primates. J Virol. 79:3930-3937.
-
(2005)
J Virol.
, vol.79
, pp. 3930-3937
-
-
Song, B.1
Javanbakht, H.2
-
60
-
-
1542288934
-
The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys
-
Stremlau M, et al. 2004. The cytoplasmic body component TRIM5alpha restricts HIV-1 infection in Old World monkeys. Nature 427:848-853.
-
(2004)
Nature
, vol.427
, pp. 848-853
-
-
Stremlau, M.1
-
61
-
-
33645794537
-
Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor
-
Stremlau M, et al. 2006. Specific recognition and accelerated uncoating of retroviral capsids by the TRIM5alpha restriction factor. Proc Natl Acad Sci U S A. 103:5514-5519.
-
(2006)
Proc Natl Acad Sci U S A.
, vol.103
, pp. 5514-5519
-
-
Stremlau, M.1
-
62
-
-
78649442925
-
Human Trim5a has additional activities that are uncoupled from retroviral capsid recognition
-
Tareen SU, Emerman M. 2011. Human Trim5a has additional activities that are uncoupled from retroviral capsid recognition. Virology 409:113-120.
-
(2011)
Virology
, vol.409
, pp. 113-120
-
-
Tareen, S.U.1
Emerman, M.2
-
64
-
-
40349116307
-
TRIM E3 ligases interfere with early and late stages of the retroviral life cycle
-
Uchil PD, Quinlan BD, Chan WT, Luna JM, Mothes W. 2008. TRIM E3 ligases interfere with early and late stages of the retroviral life cycle. PLoS Pathog. 4:e16.
-
(2008)
PLoS Pathog.
, vol.4
-
-
Uchil, P.D.1
Quinlan, B.D.2
Chan, W.T.3
Luna, J.M.4
Mothes, W.5
-
65
-
-
84871946152
-
TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity
-
Uchil PD, et al. 2013. TRIM protein-mediated regulation of inflammatory and innate immune signaling and its association with antiretroviral activity. J Virol. 87:257-272.
-
(2013)
J Virol.
, vol.87
, pp. 257-272
-
-
Uchil, P.D.1
-
66
-
-
63049093367
-
A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish
-
van der Aa LM, et al. 2009. A large new subset of TRIM genes highly diversified by duplication and positive selection in teleost fish. BMC Biol. 7:7.
-
(2009)
BMC Biol.
, vol.7
, pp. 7
-
-
Van Der Aa, L.M.1
-
67
-
-
59949096873
-
EnsemblCompara GeneTrees: Complete, duplicationaware phylogenetic trees in vertebrates
-
Vilella AJ, et al. 2009. EnsemblCompara GeneTrees: complete, duplicationaware phylogenetic trees in vertebrates. Genome Res. 19:327-335.
-
(2009)
Genome Res.
, vol.19
, pp. 327-335
-
-
Vilella, A.J.1
-
68
-
-
84867308377
-
TRIM38 negatively regulates TLR3-mediated IFN-b signaling by targeting TRIF for degradation
-
Xue Q, et al. 2012. TRIM38 negatively regulates TLR3-mediated IFN-b signaling by targeting TRIF for degradation. PLoS One 7:e46825.
-
(2012)
PLoS One
, vol.7
-
-
Xue, Q.1
-
69
-
-
84863115198
-
Intrinsic antiviral immunity
-
Yan N, Chen ZJ. 2012. Intrinsic antiviral immunity. Nat Immunol. 13:214-222.
-
(2012)
Nat Immunol.
, vol.13
, pp. 214-222
-
-
Yan, N.1
Chen, Z.J.2
-
70
-
-
0030683599
-
PAML: A program package for phylogenetic analysis by maximum likelihood
-
Yang Z. 1997. PAML: a program package for phylogenetic analysis by maximum likelihood. Comput Appl Biosci. 13:555-556.
-
(1997)
Comput Appl Biosci.
, vol.13
, pp. 555-556
-
-
Yang, Z.1
-
71
-
-
34547803197
-
PAML 4: Phylogenetic analysis by maximum likelihood
-
Yang Z. 2007. PAML 4: phylogenetic analysis by maximum likelihood. Mol Biol Evol. 24:1586-1591.
-
(2007)
Mol Biol Evol.
, vol.24
, pp. 1586-1591
-
-
Yang, Z.1
-
73
-
-
11844278251
-
A single amino acid change in the SPRY domain of human Trim5alpha leads to HIV-1 restriction
-
Yap MW, Nisole S, Stoye JP. 2005. A single amino acid change in the SPRY domain of human Trim5alpha leads to HIV-1 restriction. Curr Biol. 15:73-78.
-
(2005)
Curr Biol.
, vol.15
, pp. 73-78
-
-
Yap, M.W.1
Nisole, S.2
Stoye, J.P.3
-
74
-
-
43949086202
-
Restriction of foamy viruses by primate Trim5alpha
-
Yap MW, et al. 2008. Restriction of foamy viruses by primate Trim5alpha. J Virol. 82(11):5429-5439.
-
(2008)
J Virol.
, vol.82
, Issue.11
, pp. 5429-5439
-
-
Yap, M.W.1
-
75
-
-
33746210163
-
Isolation of an active Lv1 gene from cattle indicates that tripartite motif protein-mediated innate immunity to retroviral infection is widespread among mammals
-
Ylinen LM, et al. 2006. Isolation of an active Lv1 gene from cattle indicates that tripartite motif protein-mediated innate immunity to retroviral infection is widespread among mammals. J Virol. 80:7332-7338.
-
(2006)
J Virol.
, vol.80
, pp. 7332-7338
-
-
Ylinen, L.M.1
-
76
-
-
33748701449
-
Antiretroviral potential of human tripartite motif-5 and related proteins
-
Zhang F, Hatziioannou T, Perez-Caballero D, Derse D, Bieniasz PD. 2006. Antiretroviral potential of human tripartite motif-5 and related proteins. Virology 353(2):396-409.
-
(2006)
Virology
, vol.353
, Issue.2
, pp. 396-409
-
-
Zhang, F.1
Hatziioannou, T.2
Perez-Caballero, D.3
Derse, D.4
Bieniasz, P.D.5
-
77
-
-
84863229333
-
E3 ubiquitin ligase tripartite motif 38 negatively regulates TLR-mediated immune responses by proteasomal degradation of TNF receptor-associated factor 6 in macrophages
-
Zhao W, Wang L, Zhang M, Yuan C, Gao C. 2012. E3 ubiquitin ligase tripartite motif 38 negatively regulates TLR-mediated immune responses by proteasomal degradation of TNF receptor-associated factor 6 in macrophages. J Immunol. 188:2567-2574.
-
(2012)
J Immunol.
, vol.188
, pp. 2567-2574
-
-
Zhao, W.1
Wang, L.2
Zhang, M.3
Yuan, C.4
Gao, C.5
-
78
-
-
84862102052
-
Tripartite motif-containing protein 38 negatively regulates TLR3/4- and RIG-I-mediated IFN-b production and antiviral response by targeting NAP1
-
Zhao W, Wang L, Zhang M, Wang P, et al. 2012. Tripartite motif-containing protein 38 negatively regulates TLR3/4- and RIG-I-mediated IFN-b production and antiviral response by targeting NAP1. J Immunol. 188:5311-5318.
-
(2012)
J Immunol.
, vol.188
, pp. 5311-5318
-
-
Zhao, W.1
Wang, L.2
Zhang, M.3
Wang, P.4
-
79
-
-
0034682718
-
Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases
-
Zheng N, Wang P, Jeffrey PD, Pavletich NP. 2000. Structure of a c-Cbl-UbcH7 complex: RING domain function in ubiquitin-protein ligases. Cell 102:533-539.
-
(2000)
Cell
, vol.102
, pp. 533-539
-
-
Zheng, N.1
Wang, P.2
Jeffrey, P.D.3
Pavletich, N.P.4
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