-
1
-
-
79955768157
-
DNA methylation changes in murine breast adenocarcinomas allow the identification of candidate genes for human breast carcinogenesis
-
Acosta D., Suzuki M., Connolly D., Thompson R.F., Fazzari M.J., Greally J.M., Montagna C. DNA methylation changes in murine breast adenocarcinomas allow the identification of candidate genes for human breast carcinogenesis. Mamm. Genome 2011, 22:249-259.
-
(2011)
Mamm. Genome
, vol.22
, pp. 249-259
-
-
Acosta, D.1
Suzuki, M.2
Connolly, D.3
Thompson, R.F.4
Fazzari, M.J.5
Greally, J.M.6
Montagna, C.7
-
2
-
-
0025730640
-
A rapid micropreparation technique for extraction of DNA-binding proteins from limiting numbers of mammalian cells
-
Andrews N.C., Faller D.V. A rapid micropreparation technique for extraction of DNA-binding proteins from limiting numbers of mammalian cells. Nucleic Acids Res. 1991, 19:2499.
-
(1991)
Nucleic Acids Res.
, vol.19
, pp. 2499
-
-
Andrews, N.C.1
Faller, D.V.2
-
3
-
-
33646872978
-
Chromatin signatures of pluripotent cell lines
-
Azuara V., Perry P., Sauer S., Spivakov M., Jorgensen H.F., John R.M., Gouti M., Casanova M., Warnes G., Merkenschlager M., Fisher A.G. Chromatin signatures of pluripotent cell lines. Nat. Cell Biol. 2006, 8:532-538.
-
(2006)
Nat. Cell Biol.
, vol.8
, pp. 532-538
-
-
Azuara, V.1
Perry, P.2
Sauer, S.3
Spivakov, M.4
Jorgensen, H.F.5
John, R.M.6
Gouti, M.7
Casanova, M.8
Warnes, G.9
Merkenschlager, M.10
Fisher, A.G.11
-
4
-
-
59049106578
-
Crypt stem cells as the cells-of-origin of intestinal cancer
-
Barker N., Ridgway R.A., van Es J.H., van de Wetering M., Begthel H., van den Born M., Danenberg E., Clarke A.R., Sansom O.J., Clevers H. Crypt stem cells as the cells-of-origin of intestinal cancer. Nature 2009, 457:608-611.
-
(2009)
Nature
, vol.457
, pp. 608-611
-
-
Barker, N.1
Ridgway, R.A.2
van Es, J.H.3
van de Wetering, M.4
Begthel, H.5
van den Born, M.6
Danenberg, E.7
Clarke, A.R.8
Sansom, O.J.9
Clevers, H.10
-
5
-
-
34249026300
-
High-resolution profiling of histone methylations in the human genome
-
Barski A., Cuddapah S., Cui K., Roh T.Y., Schones D.E., Wang Z., Wei G., Chepelev I., Zhao K. High-resolution profiling of histone methylations in the human genome. Cell 2007, 129:823-837.
-
(2007)
Cell
, vol.129
, pp. 823-837
-
-
Barski, A.1
Cuddapah, S.2
Cui, K.3
Roh, T.Y.4
Schones, D.E.5
Wang, Z.6
Wei, G.7
Chepelev, I.8
Zhao, K.9
-
6
-
-
84655162785
-
Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains
-
Berman B.P., Weisenberger D.J., Aman J.F., Hinoue T., Ramjan Z., Liu Y., Noushmehr H., Lange C.P., van Dijk C.M., Tollenaar R.A., et al. Regions of focal DNA hypermethylation and long-range hypomethylation in colorectal cancer coincide with nuclear lamina-associated domains. Nat. Genet. 2012, 44:40-46.
-
(2012)
Nat. Genet.
, vol.44
, pp. 40-46
-
-
Berman, B.P.1
Weisenberger, D.J.2
Aman, J.F.3
Hinoue, T.4
Ramjan, Z.5
Liu, Y.6
Noushmehr, H.7
Lange, C.P.8
van Dijk, C.M.9
Tollenaar, R.A.10
-
7
-
-
19944430797
-
Genomic maps and comparative analysis of histone modifications in human and mouse
-
Bernstein B.E., Kamal M., Lindblad-Toh K., Bekiranov S., Bailey D.K., Huebert D.J., McMahon S., Karlsson E.K., Kulbokas E.J., Gingeras T.R., et al. Genomic maps and comparative analysis of histone modifications in human and mouse. Cell 2005, 120:169-181.
-
(2005)
Cell
, vol.120
, pp. 169-181
-
-
Bernstein, B.E.1
Kamal, M.2
Lindblad-Toh, K.3
Bekiranov, S.4
Bailey, D.K.5
Huebert, D.J.6
McMahon, S.7
Karlsson, E.K.8
Kulbokas, E.J.9
Gingeras, T.R.10
-
8
-
-
33646070846
-
A bivalent chromatin structure marks key developmental genes in embryonic stem cells
-
Bernstein B.E., Mikkelsen T.S., Xie X., Kamal M., Huebert D.J., Cuff J., Fry B., Meissner A., Wernig M., Plath K., et al. A bivalent chromatin structure marks key developmental genes in embryonic stem cells. Cell 2006, 125:315-326.
-
(2006)
Cell
, vol.125
, pp. 315-326
-
-
Bernstein, B.E.1
Mikkelsen, T.S.2
Xie, X.3
Kamal, M.4
Huebert, D.J.5
Cuff, J.6
Fry, B.7
Meissner, A.8
Wernig, M.9
Plath, K.10
-
9
-
-
34547765951
-
Action at a distance: epigenetic silencing of large chromosomal regions in carcinogenesis
-
Clark S.J. Action at a distance: epigenetic silencing of large chromosomal regions in carcinogenesis. Hum. Mol. Genet. 2007, 16(1):R88-R95.
-
(2007)
Hum. Mol. Genet.
, vol.16
, Issue.1
-
-
Clark, S.J.1
-
10
-
-
77649271805
-
Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity
-
Coolen M.W., Stirzaker C., Song J.Z., Statham A.L., Kassir Z., Moreno C.S., Young A.N., Varma V., Speed T.P., Cowley M., et al. Consolidation of the cancer genome into domains of repressive chromatin by long-range epigenetic silencing (LRES) reduces transcriptional plasticity. Nat. Cell Biol. 2010, 12:235-246.
-
(2010)
Nat. Cell Biol.
, vol.12
, pp. 235-246
-
-
Coolen, M.W.1
Stirzaker, C.2
Song, J.Z.3
Statham, A.L.4
Kassir, Z.5
Moreno, C.S.6
Young, A.N.7
Varma, V.8
Speed, T.P.9
Cowley, M.10
-
11
-
-
79951936070
-
Negative regulation of activin signal transduction
-
Choi S.C., Han J.K. Negative regulation of activin signal transduction. Vitam. Horm. 2011, 85:79-104.
-
(2011)
Vitam. Horm.
, vol.85
, pp. 79-104
-
-
Choi, S.C.1
Han, J.K.2
-
12
-
-
73649141296
-
Frequent long-range epigenetic silencing of protocadherin gene clusters on chromosome 5q31 in Wilms' tumor
-
Dallosso A.R., Hancock A.L., Szemes M., Moorwood K., Chilukamarri L., Tsai H.H., Sarkar A., Barasch J., Vuononvirta R., Jones C., et al. Frequent long-range epigenetic silencing of protocadherin gene clusters on chromosome 5q31 in Wilms' tumor. PLoS Genet. 2009, 5:e1000745.
-
(2009)
PLoS Genet.
, vol.5
-
-
Dallosso, A.R.1
Hancock, A.L.2
Szemes, M.3
Moorwood, K.4
Chilukamarri, L.5
Tsai, H.H.6
Sarkar, A.7
Barasch, J.8
Vuononvirta, R.9
Jones, C.10
-
13
-
-
84867233454
-
Long-range epigenetic silencing of chromosome 5q31 protocadherins is involved in early and late stages of colorectal tumorigenesis through modulation of oncogenic pathways
-
Dallosso A.R., Oster B., Greenhough A., Thorsen K., Curry T.J., Owen C., Hancock A.L., Szemes M., Paraskeva C., Frank M., et al. Long-range epigenetic silencing of chromosome 5q31 protocadherins is involved in early and late stages of colorectal tumorigenesis through modulation of oncogenic pathways. Oncogene 2012, 31:4409-4419.
-
(2012)
Oncogene
, vol.31
, pp. 4409-4419
-
-
Dallosso, A.R.1
Oster, B.2
Greenhough, A.3
Thorsen, K.4
Curry, T.J.5
Owen, C.6
Hancock, A.L.7
Szemes, M.8
Paraskeva, C.9
Frank, M.10
-
14
-
-
0032965890
-
Differential expression and phosphorylation of CTCF, a c-myc transcriptional regulator, during differentiation of human myeloid cells
-
Delgado M.D., Chernukhin I.V., Bigas A., Klenova E.M., Leon J. Differential expression and phosphorylation of CTCF, a c-myc transcriptional regulator, during differentiation of human myeloid cells. FEBS Lett. 1999, 444:5-10.
-
(1999)
FEBS Lett.
, vol.444
, pp. 5-10
-
-
Delgado, M.D.1
Chernukhin, I.V.2
Bigas, A.3
Klenova, E.M.4
Leon, J.5
-
15
-
-
20444443945
-
Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis
-
Docquier F., Farrar D., D'Arcy V., Chernukhin I., Robinson A.F., Loukinov D., Vatolin S., Pack S., Mackay A., Harris R.A., et al. Heightened expression of CTCF in breast cancer cells is associated with resistance to apoptosis. Cancer Res. 2005, 65:5112-5122.
-
(2005)
Cancer Res.
, vol.65
, pp. 5112-5122
-
-
Docquier, F.1
Farrar, D.2
D'Arcy, V.3
Chernukhin, I.4
Robinson, A.F.5
Loukinov, D.6
Vatolin, S.7
Pack, S.8
Mackay, A.9
Harris, R.A.10
-
16
-
-
70349441107
-
Decreased poly(ADP-ribosyl)ation of CTCF, a transcription factor, is associated with breast cancer phenotype and cell proliferation
-
Docquier F., Kita G.X., Farrar D., Jat P., O'Hare M., Chernukhin I., Gretton S., Mandal A., Alldridge L., Klenova E. Decreased poly(ADP-ribosyl)ation of CTCF, a transcription factor, is associated with breast cancer phenotype and cell proliferation. Clin. Cancer Res. 2009, 15:5762-5771.
-
(2009)
Clin. Cancer Res.
, vol.15
, pp. 5762-5771
-
-
Docquier, F.1
Kita, G.X.2
Farrar, D.3
Jat, P.4
O'Hare, M.5
Chernukhin, I.6
Gretton, S.7
Mandal, A.8
Alldridge, L.9
Klenova, E.10
-
17
-
-
40849139208
-
Epigenetics in cancer
-
Esteller M. Epigenetics in cancer. N.Engl. J. Med. 2008, 358:1148-1159.
-
(2008)
N.Engl. J. Med.
, vol.358
, pp. 1148-1159
-
-
Esteller, M.1
-
18
-
-
0037115392
-
Dependence of histone modifications and gene expression on DNA hypermethylation in cancer
-
Fahrner J.A., Eguchi S., Herman J.G., Baylin S.B. Dependence of histone modifications and gene expression on DNA hypermethylation in cancer. Cancer Res. 2002, 62:7213-7218.
-
(2002)
Cancer Res.
, vol.62
, pp. 7213-7218
-
-
Fahrner, J.A.1
Eguchi, S.2
Herman, J.G.3
Baylin, S.B.4
-
19
-
-
76749171311
-
Mutational analysis of the poly(ADP-ribosyl)ation sites of the transcription factor CTCF provides an insight into the mechanism of its regulation by poly(ADP-ribosyl)ation
-
Farrar D., Rai S., Chernukhin I., Jagodic M., Ito Y., Yammine S., Ohlsson R., Murrell A., Klenova E. Mutational analysis of the poly(ADP-ribosyl)ation sites of the transcription factor CTCF provides an insight into the mechanism of its regulation by poly(ADP-ribosyl)ation. Mol. Cell Biol. 2010, 30:1199-1216.
-
(2010)
Mol. Cell Biol.
, vol.30
, pp. 1199-1216
-
-
Farrar, D.1
Rai, S.2
Chernukhin, I.3
Jagodic, M.4
Ito, Y.5
Yammine, S.6
Ohlsson, R.7
Murrell, A.8
Klenova, E.9
-
20
-
-
33646369393
-
Epigenetic remodeling in colorectal cancer results in coordinate gene suppression across an entire chromosome band
-
Frigola J., Song J., Stirzaker C., Hinshelwood R.A., Peinado M.A., Clark S. Epigenetic remodeling in colorectal cancer results in coordinate gene suppression across an entire chromosome band. Nat. Genet. 2006, 38:540-549.
-
(2006)
Nat. Genet.
, vol.38
, pp. 540-549
-
-
Frigola, J.1
Song, J.2
Stirzaker, C.3
Hinshelwood, R.A.4
Peinado, M.A.5
Clark, S.6
-
21
-
-
84874774770
-
DNA-methylome analysis of mouse intestinal adenoma identifies a tumour-specific signature that is partly conserved in human colon cancer
-
Grimm C., Chavez L., Vilardell M., Farrall A.L., Tierling S., Bohm J.W., Grote P., Lienhard M., Dietrich J., Timmermann B., et al. DNA-methylome analysis of mouse intestinal adenoma identifies a tumour-specific signature that is partly conserved in human colon cancer. PLoS Genet. 2013, 9:e1003250.
-
(2013)
PLoS Genet.
, vol.9
-
-
Grimm, C.1
Chavez, L.2
Vilardell, M.3
Farrall, A.L.4
Tierling, S.5
Bohm, J.W.6
Grote, P.7
Lienhard, M.8
Dietrich, J.9
Timmermann, B.10
-
22
-
-
79960927422
-
Increased methylation variation in epigenetic domains across cancer types
-
Hansen K.D., Timp W., Bravo H.C., Sabunciyan S., Langmead B., McDonald O.G., Wen B., Wu H., Liu Y., Diep D., et al. Increased methylation variation in epigenetic domains across cancer types. Nat. Genet. 2011, 43:768-775.
-
(2011)
Nat. Genet.
, vol.43
, pp. 768-775
-
-
Hansen, K.D.1
Timp, W.2
Bravo, H.C.3
Sabunciyan, S.4
Langmead, B.5
McDonald, O.G.6
Wen, B.7
Wu, H.8
Liu, Y.9
Diep, D.10
-
23
-
-
35148875104
-
Epigenetic inactivation of a cluster of genes flanking MLH1 in microsatellite-unstable colorectal cancer
-
Hitchins M.P., Lin V.A., Buckle A., Cheong K., Halani N., Ku S., Kwok C.T., Packham D., Suter C.M., Meagher A., et al. Epigenetic inactivation of a cluster of genes flanking MLH1 in microsatellite-unstable colorectal cancer. Cancer Res. 2007, 67:9107-9116.
-
(2007)
Cancer Res.
, vol.67
, pp. 9107-9116
-
-
Hitchins, M.P.1
Lin, V.A.2
Buckle, A.3
Cheong, K.4
Halani, N.5
Ku, S.6
Kwok, C.T.7
Packham, D.8
Suter, C.M.9
Meagher, A.10
-
24
-
-
77952966794
-
Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping
-
Hsu P.Y., Hsu H.K., Singer G.A.C., Yan P.S., Rodriguez B.A.T., Liu J.C., Weng Y.I., Deatherage D.E., Chen Z., Pereira J.S., et al. Estrogen-mediated epigenetic repression of large chromosomal regions through DNA looping. Genome Res. 2010, 20:733-744.
-
(2010)
Genome Res.
, vol.20
, pp. 733-744
-
-
Hsu, P.Y.1
Hsu, H.K.2
Singer, G.A.C.3
Yan, P.S.4
Rodriguez, B.A.T.5
Liu, J.C.6
Weng, Y.I.7
Deatherage, D.E.8
Chen, Z.9
Pereira, J.S.10
-
25
-
-
81055154928
-
Bivalent histone modifications in stem cells poise miRNA loci for CpG island hypermethylation in human cancer
-
Iliou M.S., Lujambio A., Portela A., Brustle O., Koch P., Andersson-Vincent P.H., Sundstrom E., Hovatta O., Esteller M. Bivalent histone modifications in stem cells poise miRNA loci for CpG island hypermethylation in human cancer. Epigenetics 2011, 6:1344-1353.
-
(2011)
Epigenetics
, vol.6
, pp. 1344-1353
-
-
Iliou, M.S.1
Lujambio, A.2
Portela, A.3
Brustle, O.4
Koch, P.5
Andersson-Vincent, P.H.6
Sundstrom, E.7
Hovatta, O.8
Esteller, M.9
-
26
-
-
59149084538
-
The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores
-
Irizarry R.A., Ladd-Acosta C., Wen B., Wu Z., Montano C., Onyango P., Cui H., Gabo K., Rongione M., Webster M., et al. The human colon cancer methylome shows similar hypo- and hypermethylation at conserved tissue-specific CpG island shores. Nat. Genet. 2009, 41:178-186.
-
(2009)
Nat. Genet.
, vol.41
, pp. 178-186
-
-
Irizarry, R.A.1
Ladd-Acosta, C.2
Wen, B.3
Wu, Z.4
Montano, C.5
Onyango, P.6
Cui, H.7
Gabo, K.8
Rongione, M.9
Webster, M.10
-
27
-
-
80051956685
-
Long-range epigenetic silencing associates with deregulation of Ikaros targets in colorectal cancer cells
-
Javierre B.M., Rodriguez-Ubreva J., Al-Shahrour F., Corominas M., Grana O., Ciudad L., Agirre X., Pisano D.G., Valencia A., Roman-Gomez J., et al. Long-range epigenetic silencing associates with deregulation of Ikaros targets in colorectal cancer cells. Mol. Cancer Res. 2011, 9:1139-1151.
-
(2011)
Mol. Cancer Res.
, vol.9
, pp. 1139-1151
-
-
Javierre, B.M.1
Rodriguez-Ubreva, J.2
Al-Shahrour, F.3
Corominas, M.4
Grana, O.5
Ciudad, L.6
Agirre, X.7
Pisano, D.G.8
Valencia, A.9
Roman-Gomez, J.10
-
28
-
-
33847065486
-
The epigenomics of cancer
-
Jones P.A., Baylin S.B. The epigenomics of cancer. Cell 2007, 128:683-692.
-
(2007)
Cell
, vol.128
, pp. 683-692
-
-
Jones, P.A.1
Baylin, S.B.2
-
29
-
-
33947201809
-
Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome
-
Kim T.H., Abdullaev Z.K., Smith A.D., Ching K.A., Loukinov D.I., Green R.D., Zhang M.Q., Lobanenkov V.V., Ren B. Analysis of the vertebrate insulator protein CTCF-binding sites in the human genome. Cell 2007, 128:1231-1245.
-
(2007)
Cell
, vol.128
, pp. 1231-1245
-
-
Kim, T.H.1
Abdullaev, Z.K.2
Smith, A.D.3
Ching, K.A.4
Loukinov, D.I.5
Green, R.D.6
Zhang, M.Q.7
Lobanenkov, V.V.8
Ren, B.9
-
30
-
-
0042346386
-
Enrichment for histone H3 lysine 9 methylation at Alu repeats in human cells
-
Kondo Y., Issa J.P. Enrichment for histone H3 lysine 9 methylation at Alu repeats in human cells. J.Biol. Chem. 2003, 278:27658-27662.
-
(2003)
J.Biol. Chem.
, vol.278
, pp. 27658-27662
-
-
Kondo, Y.1
Issa, J.P.2
-
31
-
-
77951228050
-
Protocadherin of the liver, kidney, and colon associates with detergent-resistant membranes during cellular differentiation
-
Krahn M.P., Rizk S., Alfalah M., Behrendt M., Naim H.Y. Protocadherin of the liver, kidney, and colon associates with detergent-resistant membranes during cellular differentiation. J.Biol. Chem. 2010, 285:13193-13200.
-
(2010)
J.Biol. Chem.
, vol.285
, pp. 13193-13200
-
-
Krahn, M.P.1
Rizk, S.2
Alfalah, M.3
Behrendt, M.4
Naim, H.Y.5
-
32
-
-
35948949052
-
Secretin-receptor and secretin-receptor-variant expression in gastrinomas: correlation with clinical and tumoral features and secretin and calcium provocative test results
-
Long S.H., Berna M.J., Thill M., Pace A., Pradhan T.K., Hoffmann K.M., Serrano J., Jensen R.T. Secretin-receptor and secretin-receptor-variant expression in gastrinomas: correlation with clinical and tumoral features and secretin and calcium provocative test results. J.Clin. Endocrinol. Metab. 2007, 92:4394-4402.
-
(2007)
J.Clin. Endocrinol. Metab.
, vol.92
, pp. 4394-4402
-
-
Long, S.H.1
Berna, M.J.2
Thill, M.3
Pace, A.4
Pradhan, T.K.5
Hoffmann, K.M.6
Serrano, J.7
Jensen, R.T.8
-
33
-
-
67349175004
-
Long-range epigenetic silencing at 2q14.2 affects most human colorectal cancers and may have application as a non-invasive biomarker of disease
-
Mayor R., Casadome L., Azuara D., Moreno V., Clark S.J., Capella G., Peinado M.A. Long-range epigenetic silencing at 2q14.2 affects most human colorectal cancers and may have application as a non-invasive biomarker of disease. Br. J. Cancer 2009, 100:1534-1539.
-
(2009)
Br. J. Cancer
, vol.100
, pp. 1534-1539
-
-
Mayor, R.1
Casadome, L.2
Azuara, D.3
Moreno, V.4
Clark, S.J.5
Capella, G.6
Peinado, M.A.7
-
34
-
-
80052555414
-
Dynamics of bivalent chromatin domains upon drug induced reactivation and resilencing in cancer cells
-
Mayor R., Munoz M., Coolen M.W., Custodio J., Esteller M., Clark S.J., Peinado M.A. Dynamics of bivalent chromatin domains upon drug induced reactivation and resilencing in cancer cells. Epigenetics 2011, 6:1138-1148.
-
(2011)
Epigenetics
, vol.6
, pp. 1138-1148
-
-
Mayor, R.1
Munoz, M.2
Coolen, M.W.3
Custodio, J.4
Esteller, M.5
Clark, S.J.6
Peinado, M.A.7
-
35
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner A., Mikkelsen T.S., Gu H., Wernig M., Hanna J., Sivachenko A., Zhang X., Bernstein B.E., Nusbaum C., Jaffe D.B., et al. Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature 2008, 454:766-770.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
-
36
-
-
79955681163
-
The intestinal stem cell signature identifies colorectal cancer stem cells and predicts disease relapse
-
Merlos-Suarez A., Barriga F.M., Jung P., Iglesias M., Cespedes M.V., Rossell D., Sevillano M., Hernando-Momblona X., da Silva-Diz V., Munoz P., et al. The intestinal stem cell signature identifies colorectal cancer stem cells and predicts disease relapse. Cell Stem Cell 2011, 8:511-524.
-
(2011)
Cell Stem Cell
, vol.8
, pp. 511-524
-
-
Merlos-Suarez, A.1
Barriga, F.M.2
Jung, P.3
Iglesias, M.4
Cespedes, M.V.5
Rossell, D.6
Sevillano, M.7
Hernando-Momblona, X.8
da Silva-Diz, V.9
Munoz, P.10
-
37
-
-
34547624303
-
Genome-wide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen T.S., Ku M., Jaffe D.B., Issac B., Lieberman E., Giannoukos G., Alvarez P., Brockman W., Kim T.K., Koche R.P., et al. Genome-wide maps of chromatin state in pluripotent and lineage-committed cells. Nature 2007, 448:553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
-
38
-
-
51649129596
-
Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors
-
Mohn F., Weber M., Rebhan M., Roloff T.C., Richter J., Stadler M.B., Bibel M., Schubeler D. Lineage-specific polycomb targets and de novo DNA methylation define restriction and potential of neuronal progenitors. Mol. Cell 2008, 30:755-766.
-
(2008)
Mol. Cell
, vol.30
, pp. 755-766
-
-
Mohn, F.1
Weber, M.2
Rebhan, M.3
Roloff, T.C.4
Richter, J.5
Stadler, M.B.6
Bibel, M.7
Schubeler, D.8
-
39
-
-
54249097887
-
Agglomerative epigenetic aberrations are a common event in human breast cancer
-
Novak P., Jensen T., Oshiro M.M., Watts G.S., Kim C.J., Futscher B.W. Agglomerative epigenetic aberrations are a common event in human breast cancer. Cancer Res. 2008, 68:8616-8625.
-
(2008)
Cancer Res.
, vol.68
, pp. 8616-8625
-
-
Novak, P.1
Jensen, T.2
Oshiro, M.M.3
Watts, G.S.4
Kim, C.J.5
Futscher, B.W.6
-
40
-
-
33846569960
-
A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing
-
Ohm J.E., McGarvey K.M., Yu X., Cheng L., Schuebel K.E., Cope L., Mohammad H.P., Chen W., Daniel V.C., Yu W., et al. A stem cell-like chromatin pattern may predispose tumor suppressor genes to DNA hypermethylation and heritable silencing. Nat. Genet. 2007, 39:237-242.
-
(2007)
Nat. Genet.
, vol.39
, pp. 237-242
-
-
Ohm, J.E.1
McGarvey, K.M.2
Yu, X.3
Cheng, L.4
Schuebel, K.E.5
Cope, L.6
Mohammad, H.P.7
Chen, W.8
Daniel, V.C.9
Yu, W.10
-
41
-
-
59149101675
-
PCDH24-induced contact inhibition involves downregulation of beta-catenin signaling
-
Ose R., Yanagawa T., Ikeda S., Ohara O., Koga H. PCDH24-induced contact inhibition involves downregulation of beta-catenin signaling. Mol. Oncol. 2009, 3:54-66.
-
(2009)
Mol. Oncol.
, vol.3
, pp. 54-66
-
-
Ose, R.1
Yanagawa, T.2
Ikeda, S.3
Ohara, O.4
Koga, H.5
-
42
-
-
82455162772
-
Identification of DNA methylation changes associated with human gastric cancer
-
Park J.H., Park J., Choi J.K., Lyu J., Bae M.G., Lee Y.G., Bae J.B., Park D.Y., Yang H.K., Kim T.Y., Kim Y.J. Identification of DNA methylation changes associated with human gastric cancer. BMC Med. Genomics 2011, 4:82.
-
(2011)
BMC Med. Genomics
, vol.4
, pp. 82
-
-
Park, J.H.1
Park, J.2
Choi, J.K.3
Lyu, J.4
Bae, M.G.5
Lee, Y.G.6
Bae, J.B.7
Park, D.Y.8
Yang, H.K.9
Kim, T.Y.10
Kim, Y.J.11
-
43
-
-
77957970301
-
Epigenetic modifications and human disease
-
Portela A., Esteller M. Epigenetic modifications and human disease. Nat. Biotechnol. 2010, 28:1057-1068.
-
(2010)
Nat. Biotechnol.
, vol.28
, pp. 1057-1068
-
-
Portela, A.1
Esteller, M.2
-
44
-
-
25144453368
-
Structural organization of the human complexin 2 gene (CPLX2) and aspects of its functional activity
-
Raevskaya N.M., Dergunova L.V., Vladychenskaya I.P., Stavchansky V.V., Oborina M.V., Poltaraus A.B., Limborska S.A. Structural organization of the human complexin 2 gene (CPLX2) and aspects of its functional activity. Gene 2005, 359:127-137.
-
(2005)
Gene
, vol.359
, pp. 127-137
-
-
Raevskaya, N.M.1
Dergunova, L.V.2
Vladychenskaya, I.P.3
Stavchansky, V.V.4
Oborina, M.V.5
Poltaraus, A.B.6
Limborska, S.A.7
-
45
-
-
65549140672
-
Jagged1 is the pathological link between Wnt and Notch pathways in colorectal cancer
-
Rodilla V., Villanueva A., Obrador-Hevia A., Robert-Moreno A., Fernandez-Majada V., Grilli A., Lopez-Bigas N., Bellora N., Alba M.M., Torres F., et al. Jagged1 is the pathological link between Wnt and Notch pathways in colorectal cancer. Proc. Natl. Acad. Sci. U S A 2009, 106:6315-6320.
-
(2009)
Proc. Natl. Acad. Sci. U S A
, vol.106
, pp. 6315-6320
-
-
Rodilla, V.1
Villanueva, A.2
Obrador-Hevia, A.3
Robert-Moreno, A.4
Fernandez-Majada, V.5
Grilli, A.6
Lopez-Bigas, N.7
Bellora, N.8
Alba, M.M.9
Torres, F.10
-
46
-
-
58149395035
-
Bivalent domains enforce transcriptional memory of DNA methylated genes in cancer cells
-
Rodriguez J., Muñoz M., Vives L., Frangou C.G., Groudine M., Peinado M.A. Bivalent domains enforce transcriptional memory of DNA methylated genes in cancer cells. Proc. Natl. Acad. Sci. U S A 2008, 105:19809-19814.
-
(2008)
Proc. Natl. Acad. Sci. U S A
, vol.105
, pp. 19809-19814
-
-
Rodriguez, J.1
Muñoz, M.2
Vives, L.3
Frangou, C.G.4
Groudine, M.5
Peinado, M.A.6
-
47
-
-
84862509054
-
A cell cycle role for the epigenetic factor CTCF-L/BORIS
-
Rosa-Garrido M., Ceballos L., Alonso-Lecue P., Abraira C., Delgado M.D., Gandarillas A. A cell cycle role for the epigenetic factor CTCF-L/BORIS. PLoS one 2012, 7:e39371.
-
(2012)
PLoS one
, vol.7
-
-
Rosa-Garrido, M.1
Ceballos, L.2
Alonso-Lecue, P.3
Abraira, C.4
Delgado, M.D.5
Gandarillas, A.6
-
48
-
-
35848935648
-
Parallels between global transcriptional programs of polarizing Caco-2 intestinal epithelial cells invitro and gene expression programs in normal colon and colon cancer
-
Saaf A.M., Halbleib J.M., Chen X., Yuen S.T., Leung S.Y., Nelson W.J., Brown P.O. Parallels between global transcriptional programs of polarizing Caco-2 intestinal epithelial cells invitro and gene expression programs in normal colon and colon cancer. Mol. Biol. Cell 2007, 18:4245-4260.
-
(2007)
Mol. Biol. Cell
, vol.18
, pp. 4245-4260
-
-
Saaf, A.M.1
Halbleib, J.M.2
Chen, X.3
Yuen, S.T.4
Leung, S.Y.5
Nelson, W.J.6
Brown, P.O.7
-
49
-
-
84864854371
-
Lineage tracing reveals Lgr5+ stem cell activity in mouse intestinal adenomas
-
Schepers A.G., Snippert H.J., Stange D.E., van den Born M., van Es J.H., van de Wetering M., Clevers H. Lineage tracing reveals Lgr5+ stem cell activity in mouse intestinal adenomas. Science 2012, 337:730-735.
-
(2012)
Science
, vol.337
, pp. 730-735
-
-
Schepers, A.G.1
Snippert, H.J.2
Stange, D.E.3
van den Born, M.4
van Es, J.H.5
van de Wetering, M.6
Clevers, H.7
-
50
-
-
33751530055
-
Regional copy number-independent deregulation of transcription in cancer
-
Stransky N., Vallot C., Reyal F., Bernard-Pierrot I., de Medina S.G., Segraves R., de Rycke Y., Elvin P., Cassidy A., Spraggon C., et al. Regional copy number-independent deregulation of transcription in cancer. Nat. Genet. 2006, 38:1386-1396.
-
(2006)
Nat. Genet.
, vol.38
, pp. 1386-1396
-
-
Stransky, N.1
Vallot, C.2
Reyal, F.3
Bernard-Pierrot, I.4
de Medina, S.G.5
Segraves, R.6
de Rycke, Y.7
Elvin, P.8
Cassidy, A.9
Spraggon, C.10
-
51
-
-
0141842696
-
Common genetic evolutionary pathways in familial adenomatous polyposis tumors
-
Tarafa G., Prat E., Risques R.A., Gonzalez S., Camps J., Grau M., Guino E., Moreno V., Esteller M., Herman J.G., et al. Common genetic evolutionary pathways in familial adenomatous polyposis tumors. Cancer Res. 2003, 63:5731-5737.
-
(2003)
Cancer Res.
, vol.63
, pp. 5731-5737
-
-
Tarafa, G.1
Prat, E.2
Risques, R.A.3
Gonzalez, S.4
Camps, J.5
Grau, M.6
Guino, E.7
Moreno, V.8
Esteller, M.9
Herman, J.G.10
-
52
-
-
23044502281
-
CTCF regulates growth and erythroid differentiation of human myeloid leukemia cells
-
Torrano V., Chernukhin I., Docquier F., D'Arcy V., Leon J., Klenova E., Delgado M.D. CTCF regulates growth and erythroid differentiation of human myeloid leukemia cells. J.Biol. Chem. 2005, 280:28152-28161.
-
(2005)
J.Biol. Chem.
, vol.280
, pp. 28152-28161
-
-
Torrano, V.1
Chernukhin, I.2
Docquier, F.3
D'Arcy, V.4
Leon, J.5
Klenova, E.6
Delgado, M.D.7
-
53
-
-
32844459336
-
The Polycomb group protein EZH2 directly controls DNA methylation
-
Vire E., Brenner C., Deplus R., Blanchon L., Fraga M., Didelot C., Morey L., Van Eynde A., Bernard D., Vanderwinden J.M., et al. The Polycomb group protein EZH2 directly controls DNA methylation. Nature 2006, 439:871-874.
-
(2006)
Nature
, vol.439
, pp. 871-874
-
-
Vire, E.1
Brenner, C.2
Deplus, R.3
Blanchon, L.4
Fraga, M.5
Didelot, C.6
Morey, L.7
Van Eynde, A.8
Bernard, D.9
Vanderwinden, J.M.10
-
54
-
-
50249175130
-
Loss of trimethylation at lysine 27 of histone H3 is a predictor of poor outcome in breast, ovarian, and pancreatic cancers
-
Wei Y., Xia W., Zhang Z., Liu J., Wang H., Adsay N.V., Albarracin C., Yu D., Abbruzzese J.L., Mills G.B., et al. Loss of trimethylation at lysine 27 of histone H3 is a predictor of poor outcome in breast, ovarian, and pancreatic cancers. Mol. Carcinog. 2008, 47:701-706.
-
(2008)
Mol. Carcinog.
, vol.47
, pp. 701-706
-
-
Wei, Y.1
Xia, W.2
Zhang, Z.3
Liu, J.4
Wang, H.5
Adsay, N.V.6
Albarracin, C.7
Yu, D.8
Abbruzzese, J.L.9
Mills, G.B.10
-
55
-
-
84861977900
-
Comparative epigenomic annotation of regulatory DNA
-
Xiao S., Xie D., Cao X., Yu P., Xing X., Chen C.C., Musselman M., Xie M., West F.D., Lewin H.A., et al. Comparative epigenomic annotation of regulatory DNA. Cell 2012, 149:1381-1392.
-
(2012)
Cell
, vol.149
, pp. 1381-1392
-
-
Xiao, S.1
Xie, D.2
Cao, X.3
Yu, P.4
Xing, X.5
Chen, C.C.6
Musselman, M.7
Xie, M.8
West, F.D.9
Lewin, H.A.10
|