-
1
-
-
36349030394
-
Regulation of insulin secretion by SIRT4, a mitochondrial ADP-ribosyltransferase
-
Ahuja N., Schwer B., Carobbio S., Waltregny D., North B.J., Castronovo V., Maechler P., Verdin E. Regulation of insulin secretion by SIRT4, a mitochondrial ADP-ribosyltransferase. J. Biol. Chem. 2007, 282:33583-33592.
-
(2007)
J. Biol. Chem.
, vol.282
, pp. 33583-33592
-
-
Ahuja, N.1
Schwer, B.2
Carobbio, S.3
Waltregny, D.4
North, B.J.5
Castronovo, V.6
Maechler, P.7
Verdin, E.8
-
2
-
-
33644830913
-
Differential contributions of Caenorhabditis elegans histone deacetylases to huntingtin polyglutamine toxicity
-
Bates E.A., Victor M., Jones A.K., Shi Y., Hart A.C. Differential contributions of Caenorhabditis elegans histone deacetylases to huntingtin polyglutamine toxicity. J. Neurosci. 2006, 26:2830-2838.
-
(2006)
J. Neurosci.
, vol.26
, pp. 2830-2838
-
-
Bates, E.A.1
Victor, M.2
Jones, A.K.3
Shi, Y.4
Hart, A.C.5
-
3
-
-
33748901113
-
Ubiquitin-like protein 5 positively regulates chaperone gene expression in the mitochondrial unfolded protein response
-
Benedetti C., Haynes C.M., Yang Y., Harding H.P., Ron D. Ubiquitin-like protein 5 positively regulates chaperone gene expression in the mitochondrial unfolded protein response. Genetics 2006, 174:229-239.
-
(2006)
Genetics
, vol.174
, pp. 229-239
-
-
Benedetti, C.1
Haynes, C.M.2
Yang, Y.3
Harding, H.P.4
Ron, D.5
-
4
-
-
0016063911
-
The genetics of Caenorhabditis elegans
-
Brenner S. The genetics of Caenorhabditis elegans. Genetics 1974, 77:71-94.
-
(1974)
Genetics
, vol.77
, pp. 71-94
-
-
Brenner, S.1
-
5
-
-
4444241998
-
A conserved protein network controls assembly of the outer kinetochore and its ability to sustain tension
-
Cheeseman I.M., Niessen S., Anderson S., Hyndman F., Yates J.R., Oegema K., Desai A. A conserved protein network controls assembly of the outer kinetochore and its ability to sustain tension. Genes Dev. 2004, 18:2255-2268.
-
(2004)
Genes Dev.
, vol.18
, pp. 2255-2268
-
-
Cheeseman, I.M.1
Niessen, S.2
Anderson, S.3
Hyndman, F.4
Yates, J.R.5
Oegema, K.6
Desai, A.7
-
6
-
-
68949212379
-
Lysine acetylation targets protein complexes and co-regulates major cellular functions
-
Choudhary C., Kumar C., Gnad F., Nielsen M.L., Rehman M., Walther T.C., Olsen J.V., Mann M. Lysine acetylation targets protein complexes and co-regulates major cellular functions. Science 2009, 325:834-840.
-
(2009)
Science
, vol.325
, pp. 834-840
-
-
Choudhary, C.1
Kumar, C.2
Gnad, F.3
Nielsen, M.L.4
Rehman, M.5
Walther, T.C.6
Olsen, J.V.7
Mann, M.8
-
7
-
-
80054036817
-
Mass spectrometric identification of novel lysine acetylation sites in huntingtin
-
(M111 009829)
-
Cong X., Held J.M., DeGiacomo F., Bonner A., Chen J.M., Schilling B., Czerwieniec G.A., Gibson B.W., Ellerby L.M. Mass spectrometric identification of novel lysine acetylation sites in huntingtin. Mol. Cell. Proteomics 2011, 10. (M111 009829).
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Cong, X.1
Held, J.M.2
DeGiacomo, F.3
Bonner, A.4
Chen, J.M.5
Schilling, B.6
Czerwieniec, G.A.7
Gibson, B.W.8
Ellerby, L.M.9
-
8
-
-
57449099865
-
MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification
-
Cox J., Mann M. MaxQuant enables high peptide identification rates, individualized p.p.b.-range mass accuracies and proteome-wide protein quantification. Nat. Biotechnol. 2008, 26:1367-1372.
-
(2008)
Nat. Biotechnol.
, vol.26
, pp. 1367-1372
-
-
Cox, J.1
Mann, M.2
-
9
-
-
79953701087
-
Andromeda: a peptide search engine integrated into the MaxQuant environment
-
Cox J., Neuhauser N., Michalski A., Scheltema R.A., Olsen J.V., Mann M. Andromeda: a peptide search engine integrated into the MaxQuant environment. J. Proteome Res. 2011, 10:1794-1805.
-
(2011)
J. Proteome Res.
, vol.10
, pp. 1794-1805
-
-
Cox, J.1
Neuhauser, N.2
Michalski, A.3
Scheltema, R.A.4
Olsen, J.V.5
Mann, M.6
-
10
-
-
65249091951
-
Investigating the ADP-ribosyltransferase activity of sirtuins with NAD analogues and 32P-NAD
-
Du J., Jiang H., Lin H. Investigating the ADP-ribosyltransferase activity of sirtuins with NAD analogues and 32P-NAD. Biochemistry 2009, 48:2878-2890.
-
(2009)
Biochemistry
, vol.48
, pp. 2878-2890
-
-
Du, J.1
Jiang, H.2
Lin, H.3
-
11
-
-
81055122671
-
Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase
-
Du J., Zhou Y., Su X., Yu J.J., Khan S., Jiang H., Kim J., Woo J., Kim J.H., Choi B.H., He B., Chen W., Zhang S., Cerione R.A., Auwerx J., Hao Q., Lin H. Sirt5 is a NAD-dependent protein lysine demalonylase and desuccinylase. Science 2011, 334:806-809.
-
(2011)
Science
, vol.334
, pp. 806-809
-
-
Du, J.1
Zhou, Y.2
Su, X.3
Yu, J.J.4
Khan, S.5
Jiang, H.6
Kim, J.7
Woo, J.8
Kim, J.H.9
Choi, B.H.10
He, B.11
Chen, W.12
Zhang, S.13
Cerione, R.A.14
Auwerx, J.15
Hao, Q.16
Lin, H.17
-
12
-
-
34250173488
-
Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans
-
Dupuy D., Bertin N., Hidalgo C.A., Venkatesan K., Tu D., Lee D., Rosenberg J., Svrzikapa N., Blanc A., Carnec A., Carvunis A.R., Pulak R., Shingles J., Reece-Hoyes J., Hunt-Newbury R., Viveiros R., Mohler W.A., Tasan M., Roth F.P., Le Peuch C., Hope I.A., Johnsen R., Moerman D.G., Barabasi A.L., Baillie D., Vidal M. Genome-scale analysis of in vivo spatiotemporal promoter activity in Caenorhabditis elegans. Nat. Biotechnol. 2007, 25:663-668.
-
(2007)
Nat. Biotechnol.
, vol.25
, pp. 663-668
-
-
Dupuy, D.1
Bertin, N.2
Hidalgo, C.A.3
Venkatesan, K.4
Tu, D.5
Lee, D.6
Rosenberg, J.7
Svrzikapa, N.8
Blanc, A.9
Carnec, A.10
Carvunis, A.R.11
Pulak, R.12
Shingles, J.13
Reece-Hoyes, J.14
Hunt-Newbury, R.15
Viveiros, R.16
Mohler, W.A.17
Tasan, M.18
Roth, F.P.19
Le Peuch, C.20
Hope, I.A.21
Johnsen, R.22
Moerman, D.G.23
Barabasi, A.L.24
Baillie, D.25
Vidal, M.26
more..
-
14
-
-
84857883360
-
Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice
-
Fritz K.S., Galligan J.J., Hirschey M.D., Verdin E., Petersen D.R. Mitochondrial acetylome analysis in a mouse model of alcohol-induced liver injury utilizing SIRT3 knockout mice. J. Proteome Res. 2012, 11:1633-1643.
-
(2012)
J. Proteome Res.
, vol.11
, pp. 1633-1643
-
-
Fritz, K.S.1
Galligan, J.J.2
Hirschey, M.D.3
Verdin, E.4
Petersen, D.R.5
-
15
-
-
0033887456
-
Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins
-
Frye R.A. Phylogenetic classification of prokaryotic and eukaryotic Sir2-like proteins. Biochem. Biophys. Res. Commun. 2000, 273:793-798.
-
(2000)
Biochem. Biophys. Res. Commun.
, vol.273
, pp. 793-798
-
-
Frye, R.A.1
-
16
-
-
0019017615
-
Purification of human liver propionyl-CoA carboxylase by carbon tetrachloride extraction and monomeric avidin affinity chromatography
-
Gravel R.A., Lam K.F., Mahuran D., Kronis A. Purification of human liver propionyl-CoA carboxylase by carbon tetrachloride extraction and monomeric avidin affinity chromatography. Arch. Biochem. Biophys. 1980, 201:669-673.
-
(1980)
Arch. Biochem. Biophys.
, vol.201
, pp. 669-673
-
-
Gravel, R.A.1
Lam, K.F.2
Mahuran, D.3
Kronis, A.4
-
17
-
-
77949887506
-
Mammalian sirtuins: biological insights and disease relevance
-
Haigis M.C., Sinclair D.A. Mammalian sirtuins: biological insights and disease relevance. Annu. Rev. Pathol. 2010, 5:253-295.
-
(2010)
Annu. Rev. Pathol.
, vol.5
, pp. 253-295
-
-
Haigis, M.C.1
Sinclair, D.A.2
-
18
-
-
33748316536
-
SIRT4 inhibits glutamate dehydrogenase and opposes the effects of calorie restriction in pancreatic beta cells
-
Haigis M.C., Mostoslavsky R., Haigis K.M., Fahie K., Christodoulou D.C., Murphy A.J., Valenzuela D.M., Yancopoulos G.D., Karow M., Blander G., Wolberger C., Prolla T.A., Weindruch R., Alt F.W., Guarente L. SIRT4 inhibits glutamate dehydrogenase and opposes the effects of calorie restriction in pancreatic beta cells. Cell 2006, 126:941-954.
-
(2006)
Cell
, vol.126
, pp. 941-954
-
-
Haigis, M.C.1
Mostoslavsky, R.2
Haigis, K.M.3
Fahie, K.4
Christodoulou, D.C.5
Murphy, A.J.6
Valenzuela, D.M.7
Yancopoulos, G.D.8
Karow, M.9
Blander, G.10
Wolberger, C.11
Prolla, T.A.12
Weindruch, R.13
Alt, F.W.14
Guarente, L.15
-
19
-
-
33745931074
-
Sirtuins deacetylate and activate mammalian acetyl-CoA synthetases
-
Hallows W.C., Lee S., Denu J.M. Sirtuins deacetylate and activate mammalian acetyl-CoA synthetases. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:10230-10235.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 10230-10235
-
-
Hallows, W.C.1
Lee, S.2
Denu, J.M.3
-
20
-
-
0022358866
-
Axonal guidance mutants of Caenorhabditis elegans identified by filling sensory neurons with fluorescein dyes
-
Hedgecock E.M., Culotti J.G., Thomson J.N., Perkins L.A. Axonal guidance mutants of Caenorhabditis elegans identified by filling sensory neurons with fluorescein dyes. Dev. Biol. 1985, 111:158-170.
-
(1985)
Dev. Biol.
, vol.111
, pp. 158-170
-
-
Hedgecock, E.M.1
Culotti, J.G.2
Thomson, J.N.3
Perkins, L.A.4
-
21
-
-
82955233648
-
Old enzymes, new tricks: sirtuins are NAD(+)-dependent de-acylases
-
Hirschey M.D. Old enzymes, new tricks: sirtuins are NAD(+)-dependent de-acylases. Cell Metab. 2011, 14:718-719.
-
(2011)
Cell Metab.
, vol.14
, pp. 718-719
-
-
Hirschey, M.D.1
-
22
-
-
0036214657
-
PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans
-
Hobert O. PCR fusion-based approach to create reporter gene constructs for expression analysis in transgenic C. elegans. Biotechniques 2002, 32:728-730.
-
(2002)
Biotechniques
, vol.32
, pp. 728-730
-
-
Hobert, O.1
-
23
-
-
77953287165
-
Mitochondrial sirtuins
-
Huang J.Y., Hirschey M.D., Shimazu T., Ho L., Verdin E. Mitochondrial sirtuins. Biochim. Biophys. Acta 2010, 1804:1645-1651.
-
(2010)
Biochim. Biophys. Acta
, vol.1804
, pp. 1645-1651
-
-
Huang, J.Y.1
Hirschey, M.D.2
Shimazu, T.3
Ho, L.4
Verdin, E.5
-
24
-
-
34548690553
-
High-throughput in vivo analysis of gene expression in Caenorhabditis elegans
-
Hunt-Newbury R., Viveiros R., Johnsen R., Mah A., Anastas D., Fang L., Halfnight E., Lee D., Lin J., Lorch A., McKay S., Okada H.M., Pan J., Schulz A.K., Tu D., Wong K., Zhao Z., Alexeyenko A., Burglin T., Sonnhammer E., Schnabel R., Jones S.J., Marra M.A., Baillie D.L., Moerman D.G. High-throughput in vivo analysis of gene expression in Caenorhabditis elegans. PLoS Biol. 2007, 5:e237.
-
(2007)
PLoS Biol.
, vol.5
-
-
Hunt-Newbury, R.1
Viveiros, R.2
Johnsen, R.3
Mah, A.4
Anastas, D.5
Fang, L.6
Halfnight, E.7
Lee, D.8
Lin, J.9
Lorch, A.10
McKay, S.11
Okada, H.M.12
Pan, J.13
Schulz, A.K.14
Tu, D.15
Wong, K.16
Zhao, Z.17
Alexeyenko, A.18
Burglin, T.19
Sonnhammer, E.20
Schnabel, R.21
Jones, S.J.22
Marra, M.A.23
Baillie, D.L.24
Moerman, D.G.25
more..
-
25
-
-
77952547233
-
Ten years of NAD-dependent SIR2 family deacetylases: implications for metabolic diseases
-
Imai S., Guarente L. Ten years of NAD-dependent SIR2 family deacetylases: implications for metabolic diseases. Trends Pharmacol. Sci. 2010, 31:212-220.
-
(2010)
Trends Pharmacol. Sci.
, vol.31
, pp. 212-220
-
-
Imai, S.1
Guarente, L.2
-
26
-
-
77955664106
-
Measurement of key metabolic enzyme activities in mammalian cells using rapid and sensitive microplate-based assays
-
Janke R., Genzel Y., Wahl A., Reichl U. Measurement of key metabolic enzyme activities in mammalian cells using rapid and sensitive microplate-based assays. Biotechnol. Bioeng. 2010, 107:566-581.
-
(2010)
Biotechnol. Bioeng.
, vol.107
, pp. 566-581
-
-
Janke, R.1
Genzel, Y.2
Wahl, A.3
Reichl, U.4
-
27
-
-
3042808011
-
Analysis of germline chromatin silencing by double-stranded RNA-mediated interference (RNAi) in Caenorhabditis elegans
-
Jedrusik M.A., Schulze E. Analysis of germline chromatin silencing by double-stranded RNA-mediated interference (RNAi) in Caenorhabditis elegans. Methods Mol. Biol. 2004, 254:35-48.
-
(2004)
Methods Mol. Biol.
, vol.254
, pp. 35-48
-
-
Jedrusik, M.A.1
Schulze, E.2
-
28
-
-
0038811689
-
The biotin enzyme family: conserved structural motifs and domain rearrangements
-
Jitrapakdee S., Wallace J.C. The biotin enzyme family: conserved structural motifs and domain rearrangements. Curr. Protein Pept. Sci. 2003, 4:217-229.
-
(2003)
Curr. Protein Pept. Sci.
, vol.4
, pp. 217-229
-
-
Jitrapakdee, S.1
Wallace, J.C.2
-
30
-
-
48249150656
-
Structure, mechanism and regulation of pyruvate carboxylase
-
Jitrapakdee S., St Maurice M., Rayment I., Cleland W.W., Wallace J.C., Attwood P.V. Structure, mechanism and regulation of pyruvate carboxylase. Biochem. J. 2008, 413:369-387.
-
(2008)
Biochem. J.
, vol.413
, pp. 369-387
-
-
Jitrapakdee, S.1
St Maurice, M.2
Rayment, I.3
Cleland, W.W.4
Wallace, J.C.5
Attwood, P.V.6
-
31
-
-
33746992118
-
Substrate and functional diversity of lysine acetylation revealed by a proteomics survey
-
Kim S.C., Sprung R., Chen Y., Xu Y., Ball H., Pei J., Cheng T., Kho Y., Xiao H., Xiao L., Grishin N.V., White M., Yang X.J., Zhao Y. Substrate and functional diversity of lysine acetylation revealed by a proteomics survey. Mol. Cell 2006, 23:607-618.
-
(2006)
Mol. Cell
, vol.23
, pp. 607-618
-
-
Kim, S.C.1
Sprung, R.2
Chen, Y.3
Xu, Y.4
Ball, H.5
Pei, J.6
Cheng, T.7
Kho, Y.8
Xiao, H.9
Xiao, L.10
Grishin, N.V.11
White, M.12
Yang, X.J.13
Zhao, Y.14
-
32
-
-
0019300750
-
Isolation of 3-methylcrotonyl-coenzyme A carboxylase from bovine kidney
-
Lau E.P., Cochran B.C., Fall R.R. Isolation of 3-methylcrotonyl-coenzyme A carboxylase from bovine kidney. Arch. Biochem. Biophys. 1980, 205:352-359.
-
(1980)
Arch. Biochem. Biophys.
, vol.205
, pp. 352-359
-
-
Lau, E.P.1
Cochran, B.C.2
Fall, R.R.3
-
34
-
-
70350217759
-
Proteomic analysis of mitochondria from Caenorhabditis elegans
-
Li J., Cai T., Wu P., Cui Z., Chen X., Hou J., Xie Z., Xue P., Shi L., Liu P., Yates J.R., Yang F. Proteomic analysis of mitochondria from Caenorhabditis elegans. Proteomics 2009, 9:4539-4553.
-
(2009)
Proteomics
, vol.9
, pp. 4539-4553
-
-
Li, J.1
Cai, T.2
Wu, P.3
Cui, Z.4
Chen, X.5
Hou, J.6
Xie, Z.7
Xue, P.8
Shi, L.9
Liu, P.10
Yates, J.R.11
Yang, F.12
-
35
-
-
0029762913
-
Improving structural integrity of cryosections for immunogold labeling
-
Liou W., Geuze H.J., Slot J.W. Improving structural integrity of cryosections for immunogold labeling. Histochem. Cell Biol. 1996, 106:41-58.
-
(1996)
Histochem. Cell Biol.
, vol.106
, pp. 41-58
-
-
Liou, W.1
Geuze, H.J.2
Slot, J.W.3
-
36
-
-
20444409132
-
Mouse Sir2 homolog SIRT6 is a nuclear ADP-ribosyltransferase
-
Liszt G., Ford E., Kurtev M., Guarente L. Mouse Sir2 homolog SIRT6 is a nuclear ADP-ribosyltransferase. J. Biol. Chem. 2005, 280:21313-21320.
-
(2005)
J. Biol. Chem.
, vol.280
, pp. 21313-21320
-
-
Liszt, G.1
Ford, E.2
Kurtev, M.3
Guarente, L.4
-
37
-
-
37549002891
-
Mammalian Sir2 homolog SIRT3 regulates global mitochondrial lysine acetylation
-
Lombard D.B., Alt F.W., Cheng H.L., Bunkenborg J., Streeper R.S., Mostoslavsky R., Kim J., Yancopoulos G., Valenzuela D., Murphy A., Yang Y., Chen Y., Hirschey M.D., Bronson R.T., Haigis M., Guarente L.P., Farese R.V., Weissman S., Verdin E., Schwer B. Mammalian Sir2 homolog SIRT3 regulates global mitochondrial lysine acetylation. Mol. Cell. Biol. 2007, 27:8807-8814.
-
(2007)
Mol. Cell. Biol.
, vol.27
, pp. 8807-8814
-
-
Lombard, D.B.1
Alt, F.W.2
Cheng, H.L.3
Bunkenborg, J.4
Streeper, R.S.5
Mostoslavsky, R.6
Kim, J.7
Yancopoulos, G.8
Valenzuela, D.9
Murphy, A.10
Yang, Y.11
Chen, Y.12
Hirschey, M.D.13
Bronson, R.T.14
Haigis, M.15
Guarente, L.P.16
Farese, R.V.17
Weissman, S.18
Verdin, E.19
Schwer, B.20
more..
-
38
-
-
80054746880
-
Mitochondrial sirtuins in the regulation of mitochondrial activity and metabolic adaptation
-
Lombard D.B., Tishkoff D.X., Bao J. Mitochondrial sirtuins in the regulation of mitochondrial activity and metabolic adaptation. Handb. Exp. Pharmacol. 2011, 206:163-188.
-
(2011)
Handb. Exp. Pharmacol.
, vol.206
, pp. 163-188
-
-
Lombard, D.B.1
Tishkoff, D.X.2
Bao, J.3
-
39
-
-
84865726581
-
Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns
-
Lundby A., Lage K., Weinert B.T., Bekker-Jensen D.B., Secher A., Skovgaard T., Kelstrup C.D., Dmytriyev A., Choudhary C., Lundby C., Olsen J.V. Proteomic analysis of lysine acetylation sites in rat tissues reveals organ specificity and subcellular patterns. Cell Rep. 2012, 2:419-431.
-
(2012)
Cell Rep.
, vol.2
, pp. 419-431
-
-
Lundby, A.1
Lage, K.2
Weinert, B.T.3
Bekker-Jensen, D.B.4
Secher, A.5
Skovgaard, T.6
Kelstrup, C.D.7
Dmytriyev, A.8
Choudhary, C.9
Lundby, C.10
Olsen, J.V.11
-
40
-
-
84887212584
-
Optimizing dietary restriction for genetic epistasis analysis and gene discovery in C. elegans
-
Mair W., Panowski S.H., Shaw R.J., Dillin A. Optimizing dietary restriction for genetic epistasis analysis and gene discovery in C. elegans. PLoS One 2009, 4:e4535.
-
(2009)
PLoS One
, vol.4
-
-
Mair, W.1
Panowski, S.H.2
Shaw, R.J.3
Dillin, A.4
-
41
-
-
53749097353
-
A novel role for the SMG-1 kinase in lifespan and oxidative stress resistance in Caenorhabditis elegans
-
Masse I., Molin L., Mouchiroud L., Vanhems P., Palladino F., Billaud M., Solari F. A novel role for the SMG-1 kinase in lifespan and oxidative stress resistance in Caenorhabditis elegans. PLoS One 2008, 3:e3354.
-
(2008)
PLoS One
, vol.3
-
-
Masse, I.1
Molin, L.2
Mouchiroud, L.3
Vanhems, P.4
Palladino, F.5
Billaud, M.6
Solari, F.7
-
42
-
-
3242683216
-
Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans
-
McKay S.J., Johnsen R., Khattra J., Asano J., Baillie D.L., Chan S., Dube N., Fang L., Goszczynski B., Ha E., Halfnight E., Hollebakken R., Huang P., Hung K., Jensen V., Jones S.J., Kai H., Li D., Mah A., Marra M., McGhee J., Newbury R., Pouzyrev A., Riddle D.L., Sonnhammer E., Tian H., Tu D., Tyson J.R., Vatcher G., Warner A., Wong K., Zhao Z., Moerman D.G. Gene expression profiling of cells, tissues, and developmental stages of the nematode C. elegans. Cold Spring Harb. Symp. Quant. Biol. 2003, 68:159-169.
-
(2003)
Cold Spring Harb. Symp. Quant. Biol.
, vol.68
, pp. 159-169
-
-
McKay, S.J.1
Johnsen, R.2
Khattra, J.3
Asano, J.4
Baillie, D.L.5
Chan, S.6
Dube, N.7
Fang, L.8
Goszczynski, B.9
Ha, E.10
Halfnight, E.11
Hollebakken, R.12
Huang, P.13
Hung, K.14
Jensen, V.15
Jones, S.J.16
Kai, H.17
Li, D.18
Mah, A.19
Marra, M.20
McGhee, J.21
Newbury, R.22
Pouzyrev, A.23
Riddle, D.L.24
Sonnhammer, E.25
Tian, H.26
Tu, D.27
Tyson, J.R.28
Vatcher, G.29
Warner, A.30
Wong, K.31
Zhao, Z.32
Moerman, D.G.33
more..
-
43
-
-
0029443103
-
DNA transformation
-
Mello C.a.F.A. DNA transformation. Methods Cell Biol. 1995, 48:451-482.
-
(1995)
Methods Cell Biol.
, vol.48
, pp. 451-482
-
-
Mello, C.1
-
44
-
-
0025942107
-
Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences
-
Mello C.C., Kramer J.M., Stinchcomb D., Ambros V. Efficient gene transfer in C. elegans: extrachromosomal maintenance and integration of transforming sequences. EMBO J. 1991, 10:3959-3970.
-
(1991)
EMBO J.
, vol.10
, pp. 3959-3970
-
-
Mello, C.C.1
Kramer, J.M.2
Stinchcomb, D.3
Ambros, V.4
-
45
-
-
26244436281
-
Evolutionarily conserved and nonconserved cellular localizations and functions of human SIRT proteins
-
Michishita E., Park J.Y., Burneskis J.M., Barrett J.C., Horikawa I. Evolutionarily conserved and nonconserved cellular localizations and functions of human SIRT proteins. Mol. Biol. Cell 2005, 16:4623-4635.
-
(2005)
Mol. Biol. Cell
, vol.16
, pp. 4623-4635
-
-
Michishita, E.1
Park, J.Y.2
Burneskis, J.M.3
Barrett, J.C.4
Horikawa, I.5
-
46
-
-
41349090663
-
SIRT6 is a histone H3 lysine 9 deacetylase that modulates telomeric chromatin
-
Michishita E., McCord R.A., Berber E., Kioi M., Padilla-Nash H., Damian M., Cheung P., Kusumoto R., Kawahara T.L., Barrett J.C., Chang H.Y., Bohr V.A., Ried T., Gozani O., Chua K.F. SIRT6 is a histone H3 lysine 9 deacetylase that modulates telomeric chromatin. Nature 2008, 452:492-496.
-
(2008)
Nature
, vol.452
, pp. 492-496
-
-
Michishita, E.1
McCord, R.A.2
Berber, E.3
Kioi, M.4
Padilla-Nash, H.5
Damian, M.6
Cheung, P.7
Kusumoto, R.8
Kawahara, T.L.9
Barrett, J.C.10
Chang, H.Y.11
Bohr, V.A.12
Ried, T.13
Gozani, O.14
Chua, K.F.15
-
47
-
-
65249087389
-
SIRT5 deacetylates carbamoyl phosphate synthetase 1 and regulates the urea cycle
-
Nakagawa T., Lomb D.J., Haigis M.C., Guarente L. SIRT5 deacetylates carbamoyl phosphate synthetase 1 and regulates the urea cycle. Cell 2009, 137:560-570.
-
(2009)
Cell
, vol.137
, pp. 560-570
-
-
Nakagawa, T.1
Lomb, D.J.2
Haigis, M.C.3
Guarente, L.4
-
48
-
-
77957762687
-
SIRT4 regulates fatty acid oxidation and mitochondrial gene expression in liver and muscle cells
-
Nasrin N., Wu X., Fortier E., Feng Y., Bare O.C., Chen S., Ren X., Wu Z., Streeper R.S., Bordone L. SIRT4 regulates fatty acid oxidation and mitochondrial gene expression in liver and muscle cells. J. Biol. Chem. 2010, 285:31995-32002.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 31995-32002
-
-
Nasrin, N.1
Wu, X.2
Fortier, E.3
Feng, Y.4
Bare, O.C.5
Chen, S.6
Ren, X.7
Wu, Z.8
Streeper, R.S.9
Bordone, L.10
-
49
-
-
34247396011
-
A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC)
-
Ong S.E., Mann M. A practical recipe for stable isotope labeling by amino acids in cell culture (SILAC). Nat. Protoc. 2006, 1:2650-2660.
-
(2006)
Nat. Protoc.
, vol.1
, pp. 2650-2660
-
-
Ong, S.E.1
Mann, M.2
-
50
-
-
83055173304
-
The first identification of lysine malonylation substrates and its regulatory enzyme
-
(M111 012658)
-
Peng C., Lu Z., Xie Z., Cheng Z., Chen Y., Tan M., Luo H., Zhang Y., He W., Yang K., Zwaans B.M., Tishkoff D., Ho L., Lombard D., He T.C., Dai J., Verdin E., Ye Y., Zhao Y. The first identification of lysine malonylation substrates and its regulatory enzyme. Mol. Cell. Proteomics 2011, 10. (M111 012658).
-
(2011)
Mol. Cell. Proteomics
, vol.10
-
-
Peng, C.1
Lu, Z.2
Xie, Z.3
Cheng, Z.4
Chen, Y.5
Tan, M.6
Luo, H.7
Zhang, Y.8
He, W.9
Yang, K.10
Zwaans, B.M.11
Tishkoff, D.12
Ho, L.13
Lombard, D.14
He, T.C.15
Dai, J.16
Verdin, E.17
Ye, Y.18
Zhao, Y.19
-
51
-
-
0037443054
-
Identification of genes that protect the C. elegans genome against mutations by genome-wide RNAi
-
Pothof J., van Haaften G., Thijssen K., Kamath R.S., Fraser A.G., Ahringer J., Plasterk R.H., Tijsterman M. Identification of genes that protect the C. elegans genome against mutations by genome-wide RNAi. Genes Dev. 2003, 17:443-448.
-
(2003)
Genes Dev.
, vol.17
, pp. 443-448
-
-
Pothof, J.1
van Haaften, G.2
Thijssen, K.3
Kamath, R.S.4
Fraser, A.G.5
Ahringer, J.6
Plasterk, R.H.7
Tijsterman, M.8
-
52
-
-
0026009263
-
Electron microscopic localization of pyruvate carboxylase in rat liver and Saccharomyces cerevisiae by immunogold procedures
-
Rohde M., Lim F., Wallace J.C. Electron microscopic localization of pyruvate carboxylase in rat liver and Saccharomyces cerevisiae by immunogold procedures. Arch. Biochem. Biophys. 1991, 290:197-201.
-
(1991)
Arch. Biochem. Biophys.
, vol.290
, pp. 197-201
-
-
Rohde, M.1
Lim, F.2
Wallace, J.C.3
-
53
-
-
33745203038
-
The biochemistry of sirtuins
-
Sauve A.A., Wolberger C., Schramm V.L., Boeke J.D. The biochemistry of sirtuins. Annu. Rev. Biochem. 2006, 75:435-465.
-
(2006)
Annu. Rev. Biochem.
, vol.75
, pp. 435-465
-
-
Sauve, A.A.1
Wolberger, C.2
Schramm, V.L.3
Boeke, J.D.4
-
54
-
-
0003118424
-
A century of mitochondrial research: achievements and perspectives
-
Scheffler I.E. A century of mitochondrial research: achievements and perspectives. Mitochondrion 2001, 1:3-31.
-
(2001)
Mitochondrion
, vol.1
, pp. 3-31
-
-
Scheffler, I.E.1
-
55
-
-
50149103440
-
Substrates and regulation mechanisms for the human mitochondrial sirtuins Sirt3 and Sirt5
-
Schlicker C., Gertz M., Papatheodorou P., Kachholz B., Becker C.F., Steegborn C. Substrates and regulation mechanisms for the human mitochondrial sirtuins Sirt3 and Sirt5. J. Mol. Biol. 2008, 382:790-801.
-
(2008)
J. Mol. Biol.
, vol.382
, pp. 790-801
-
-
Schlicker, C.1
Gertz, M.2
Papatheodorou, P.3
Kachholz, B.4
Becker, C.F.5
Steegborn, C.6
-
56
-
-
0037135972
-
The human silent information regulator (Sir)2 homologue hSIRT3 is a mitochondrial nicotinamide adenine dinucleotide-dependent deacetylase
-
Schwer B., North B.J., Frye R.A., Ott M., Verdin E. The human silent information regulator (Sir)2 homologue hSIRT3 is a mitochondrial nicotinamide adenine dinucleotide-dependent deacetylase. J. Cell Biol. 2002, 158:647-657.
-
(2002)
J. Cell Biol.
, vol.158
, pp. 647-657
-
-
Schwer, B.1
North, B.J.2
Frye, R.A.3
Ott, M.4
Verdin, E.5
-
57
-
-
33745889628
-
Reversible lysine acetylation controls the activity of the mitochondrial enzyme acetyl-CoA synthetase 2
-
Schwer B., Bunkenborg J., Verdin R.O., Andersen J.S., Verdin E. Reversible lysine acetylation controls the activity of the mitochondrial enzyme acetyl-CoA synthetase 2. Proc. Natl. Acad. Sci. U. S. A. 2006, 103:10224-10229.
-
(2006)
Proc. Natl. Acad. Sci. U. S. A.
, vol.103
, pp. 10224-10229
-
-
Schwer, B.1
Bunkenborg, J.2
Verdin, R.O.3
Andersen, J.S.4
Verdin, E.5
-
58
-
-
0016042268
-
Purification and properties of human liver pyruvate carboxylase
-
Scrutton M.C., White M.D. Purification and properties of human liver pyruvate carboxylase. Biochem. Med. 1974, 9:217-292.
-
(1974)
Biochem. Med.
, vol.9
, pp. 217-292
-
-
Scrutton, M.C.1
White, M.D.2
-
59
-
-
0029927505
-
Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels
-
Shevchenko A., Wilm M., Vorm O., Mann M. Mass spectrometric sequencing of proteins silver-stained polyacrylamide gels. Anal. Chem. 1996, 68:850-858.
-
(1996)
Anal. Chem.
, vol.68
, pp. 850-858
-
-
Shevchenko, A.1
Wilm, M.2
Vorm, O.3
Mann, M.4
-
60
-
-
84889487292
-
-
Wiley-VCH Verlag GmbH, Weinheim, Germany, A.S. Spirin, J.R. Swartz (Eds.)
-
Cell-Free Protein Synthesis: Methods and Protocols 2008, Wiley-VCH Verlag GmbH, Weinheim, Germany. A.S. Spirin, J.R. Swartz (Eds.).
-
(2008)
Cell-Free Protein Synthesis: Methods and Protocols
-
-
-
61
-
-
38449085292
-
Maintenance of C. elegans
-
Stiernagle T. Maintenance of C. elegans. WormBook 2006, 1-11.
-
(2006)
WormBook
, pp. 1-11
-
-
Stiernagle, T.1
-
62
-
-
0022348755
-
Extrachromosomal DNA transformation of Caenorhabditis elegans
-
Stinchcomb D.T., Shaw J.E., Carr S.H., Hirsh D. Extrachromosomal DNA transformation of Caenorhabditis elegans. Mol. Cell. Biol. 1985, 5:3484-3496.
-
(1985)
Mol. Cell. Biol.
, vol.5
, pp. 3484-3496
-
-
Stinchcomb, D.T.1
Shaw, J.E.2
Carr, S.H.3
Hirsh, D.4
-
63
-
-
80052942443
-
Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification
-
Tan M., Luo H., Lee S., Jin F., Yang J.S., Montellier E., Buchou T., Cheng Z., Rousseaux S., Rajagopal N., Lu Z., Ye Z., Zhu Q., Wysocka J., Ye Y., Khochbin S., Ren B., Zhao Y. Identification of 67 histone marks and histone lysine crotonylation as a new type of histone modification. Cell. 2011, 146:1016-1028.
-
(2011)
Cell.
, vol.146
, pp. 1016-1028
-
-
Tan, M.1
Luo, H.2
Lee, S.3
Jin, F.4
Yang, J.S.5
Montellier, E.6
Buchou, T.7
Cheng, Z.8
Rousseaux, S.9
Rajagopal, N.10
Lu, Z.11
Ye, Z.12
Zhu, Q.13
Wysocka, J.14
Ye, Y.15
Khochbin, S.16
Ren, B.17
Zhao, Y.18
-
64
-
-
78650248160
-
Sirt3-mediated deacetylation of evolutionarily conserved lysine 122 regulates MnSOD activity in response to stress
-
Tao R., Coleman M.C., Pennington J.D., Ozden O., Park S.H., Jiang H., Kim H.S., Flynn C.R., Hill S., Hayes McDonald W., Olivier A.K., Spitz D.R., Gius D. Sirt3-mediated deacetylation of evolutionarily conserved lysine 122 regulates MnSOD activity in response to stress. Mol. Cell 2010, 40:893-904.
-
(2010)
Mol. Cell
, vol.40
, pp. 893-904
-
-
Tao, R.1
Coleman, M.C.2
Pennington, J.D.3
Ozden, O.4
Park, S.H.5
Jiang, H.6
Kim, H.S.7
Flynn, C.R.8
Hill, S.9
Hayes McDonald, W.10
Olivier, A.K.11
Spitz, D.R.12
Gius, D.13
-
65
-
-
0032578911
-
Specific interference by ingested dsRNA
-
Timmons L., Fire A. Specific interference by ingested dsRNA. Nature 1998, 395:854.
-
(1998)
Nature
, vol.395
, pp. 854
-
-
Timmons, L.1
Fire, A.2
-
66
-
-
0035826271
-
Increased dosage of a sir-2 gene extends lifespan in Caenorhabditis elegans
-
Tissenbaum H.A., Guarente L. Increased dosage of a sir-2 gene extends lifespan in Caenorhabditis elegans. Nature 2001, 410:227-230.
-
(2001)
Nature
, vol.410
, pp. 227-230
-
-
Tissenbaum, H.A.1
Guarente, L.2
-
67
-
-
42949135961
-
Utility of immonium ions for assignment of epsilon-N-acetyllysine-containing peptides by tandem mass spectrometry
-
Trelle M.B., Jensen O.N. Utility of immonium ions for assignment of epsilon-N-acetyllysine-containing peptides by tandem mass spectrometry. Anal. Chem. 2008, 80:3422-3430.
-
(2008)
Anal. Chem.
, vol.80
, pp. 3422-3430
-
-
Trelle, M.B.1
Jensen, O.N.2
-
68
-
-
34247166642
-
The Caenorhabditis elegans nicotinamidase PNC-1 enhances survival
-
van der Horst A., Schavemaker J.M., Pellis-van Berkel W., Burgering B.M. The Caenorhabditis elegans nicotinamidase PNC-1 enhances survival. Mech. Ageing Dev. 2007, 128:346-349.
-
(2007)
Mech. Ageing Dev.
, vol.128
, pp. 346-349
-
-
van der Horst, A.1
Schavemaker, J.M.2
Pellis-van Berkel, W.3
Burgering, B.M.4
-
69
-
-
30344432706
-
Role of mitochondrial DNA in toxic responses to oxidative stress
-
Van Houten B., Woshner V., Santos J.H. Role of mitochondrial DNA in toxic responses to oxidative stress. DNA Repair (Amst) 2006, 5:145-152.
-
(2006)
DNA Repair (Amst)
, vol.5
, pp. 145-152
-
-
Van Houten, B.1
Woshner, V.2
Santos, J.H.3
-
70
-
-
0842282844
-
Measurement of mammalian histone deacetylase activity
-
Verdin E., Dequiedt F., Fischle W., Frye R., Marshall B., North B. Measurement of mammalian histone deacetylase activity. Methods Enzymol. 2004, 377:180-196.
-
(2004)
Methods Enzymol.
, vol.377
, pp. 180-196
-
-
Verdin, E.1
Dequiedt, F.2
Fischle, W.3
Frye, R.4
Marshall, B.5
North, B.6
-
71
-
-
78649328799
-
Sirtuin regulation of mitochondria: energy production, apoptosis, and signaling
-
Verdin E., Hirschey M.D., Finley L.W., Haigis M.C. Sirtuin regulation of mitochondria: energy production, apoptosis, and signaling. Trends Biochem. Sci. 2010, 35:669-675.
-
(2010)
Trends Biochem. Sci.
, vol.35
, pp. 669-675
-
-
Verdin, E.1
Hirschey, M.D.2
Finley, L.W.3
Haigis, M.C.4
-
72
-
-
28244475950
-
Overlapping and distinct functions for a Caenorhabditis elegans SIR2 and DAF-16/FOXO
-
Wang Y., Tissenbaum H.A. Overlapping and distinct functions for a Caenorhabditis elegans SIR2 and DAF-16/FOXO. Mech. Ageing Dev. 2006, 127:48-56.
-
(2006)
Mech. Ageing Dev.
, vol.127
, pp. 48-56
-
-
Wang, Y.1
Tissenbaum, H.A.2
-
73
-
-
77149120797
-
Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux
-
Wang Q., Zhang Y., Yang C., Xiong H., Lin Y., Yao J., Li H., Xie L., Zhao W., Yao Y., Ning Z.B., Zeng R., Xiong Y., Guan K.L., Zhao S., Zhao G.P. Acetylation of metabolic enzymes coordinates carbon source utilization and metabolic flux. Science 2010, 327:1004-1007.
-
(2010)
Science
, vol.327
, pp. 1004-1007
-
-
Wang, Q.1
Zhang, Y.2
Yang, C.3
Xiong, H.4
Lin, Y.5
Yao, J.6
Li, H.7
Xie, L.8
Zhao, W.9
Yao, Y.10
Ning, Z.B.11
Zeng, R.12
Xiong, Y.13
Guan, K.L.14
Zhao, S.15
Zhao, G.P.16
-
74
-
-
12444262344
-
The cargo in vacuolar storage protein transport vesicles is stratified
-
Wenzel D., Schauermann G., von Lupke A., Hinz G. The cargo in vacuolar storage protein transport vesicles is stratified. Traffic 2005, 6:45-55.
-
(2005)
Traffic
, vol.6
, pp. 45-55
-
-
Wenzel, D.1
Schauermann, G.2
von Lupke, A.3
Hinz, G.4
-
75
-
-
67650070795
-
HIS-24 linker histone and SIR-2.1 deacetylase induce H3K27me3 in the Caenorhabditis elegans germ line
-
Wirth M., Paap F., Fischle W., Wenzel D., Agafonov D.E., Samatov T.R., Wisniewski J.R., Jedrusik-Bode M. HIS-24 linker histone and SIR-2.1 deacetylase induce H3K27me3 in the Caenorhabditis elegans germ line. Mol. Cell. Biol. 2009, 29:3700-3709.
-
(2009)
Mol. Cell. Biol.
, vol.29
, pp. 3700-3709
-
-
Wirth, M.1
Paap, F.2
Fischle, W.3
Wenzel, D.4
Agafonov, D.E.5
Samatov, T.R.6
Wisniewski, J.R.7
Jedrusik-Bode, M.8
-
76
-
-
3943071801
-
Sirtuin activators mimic caloric restriction and delay ageing in metazoans
-
Wood J.G., Rogina B., Lavu S., Howitz K., Helfand S.L., Tatar M., Sinclair D. Sirtuin activators mimic caloric restriction and delay ageing in metazoans. Nature 2004, 430:686-689.
-
(2004)
Nature
, vol.430
, pp. 686-689
-
-
Wood, J.G.1
Rogina, B.2
Lavu, S.3
Howitz, K.4
Helfand, S.L.5
Tatar, M.6
Sinclair, D.7
-
77
-
-
34548627517
-
+ levels dictate cell survival
-
+ levels dictate cell survival. Cell 2007, 130:1095-1107.
-
(2007)
Cell
, vol.130
, pp. 1095-1107
-
-
Yang, H.1
Yang, T.2
Baur, J.A.3
Perez, E.4
Matsui, T.5
Carmona, J.J.6
Lamming, D.W.7
Souza-Pinto, N.C.8
Bohr, V.A.9
Rosenzweig, A.10
de Cabo, R.11
Sauve, A.A.12
Sinclair, D.A.13
-
78
-
-
61849108746
-
Identification and verification of lysine propionylation and butyrylation in yeast core histones using PTMap software
-
Zhang K., Chen Y., Zhang Z., Zhao Y. Identification and verification of lysine propionylation and butyrylation in yeast core histones using PTMap software. J. Proteome Res. 2009, 8:900-906.
-
(2009)
J. Proteome Res.
, vol.8
, pp. 900-906
-
-
Zhang, K.1
Chen, Y.2
Zhang, Z.3
Zhao, Y.4
-
79
-
-
78650516004
-
Identification of lysine succinylation as a new post-translational modification
-
Zhang Z., Tan M., Xie Z., Dai L., Chen Y., Zhao Y. Identification of lysine succinylation as a new post-translational modification. Nat. Chem. Biol. 2011, 7:58-63.
-
(2011)
Nat. Chem. Biol.
, vol.7
, pp. 58-63
-
-
Zhang, Z.1
Tan, M.2
Xie, Z.3
Dai, L.4
Chen, Y.5
Zhao, Y.6
-
80
-
-
77149148756
-
Regulation of cellular metabolism by protein lysine acetylation
-
Zhao S., Xu W., Jiang W., Yu W., Lin Y., Zhang T., Yao J., Zhou L., Zeng Y., Li H., Li Y., Shi J., An W., Hancock S.M., He F., Qin L., Chin J., Yang P., Chen X., Lei Q., Xiong Y., Guan K.L. Regulation of cellular metabolism by protein lysine acetylation. Science 2010, 327:1000-1004.
-
(2010)
Science
, vol.327
, pp. 1000-1004
-
-
Zhao, S.1
Xu, W.2
Jiang, W.3
Yu, W.4
Lin, Y.5
Zhang, T.6
Yao, J.7
Zhou, L.8
Zeng, Y.9
Li, H.10
Li, Y.11
Shi, J.12
An, W.13
Hancock, S.M.14
He, F.15
Qin, L.16
Chin, J.17
Yang, P.18
Chen, X.19
Lei, Q.20
Xiong, Y.21
Guan, K.L.22
more..
|