-
1
-
-
81355156480
-
Cataract as a protein-aggregation disease
-
In, pp, John Wiley & Sons, Inc.
-
Wang, Y. and King, J. A. (2010) Cataract as a protein-aggregation disease, In Protein Misfolding Diseases, pp 487-515, John Wiley & Sons, Inc.
-
(2010)
Protein Misfolding Diseases
, pp. 487-515
-
-
Wang, Y.1
King, J.A.2
-
2
-
-
4143088433
-
Ageing and vision: Structure, stability and function of lens crystallins
-
Bloemendal, H., de Jong, W., Jaenicke, R., Lubsen, N. H., Slingsby, C., and Tardieu, A. (2004) Ageing and vision: structure, stability and function of lens crystallins Prog. Biophys. Mol. Biol. 86, 407-485
-
(2004)
Prog. Biophys. Mol. Biol.
, vol.86
, pp. 407-485
-
-
Bloemendal, H.1
De Jong, W.2
Jaenicke, R.3
Lubsen, N.H.4
Slingsby, C.5
Tardieu, A.6
-
3
-
-
18044388716
-
Age-related nuclear cataract - Oxidation is the key
-
Truscott, R. J. W. (2005) Age-related nuclear cataract-oxidation is the key Exp. Eye Res. 80, 709-725
-
(2005)
Exp. Eye Res.
, vol.80
, pp. 709-725
-
-
Truscott, R.J.W.1
-
4
-
-
0033829222
-
The major in vivo modifications of the human water-insoluble lens crystallins are disulfide bonds, deamidation, methionine oxidation and backbone cleavage
-
Hanson, S. R. A., Hasan, A., Smith, D. L., and Smith, J. B. (2000) The major in vivo modifications of the human water-insoluble lens crystallins are disulfide bonds, deamidation, methionine oxidation and backbone cleavage Exp. Eye Res. 71, 195-207
-
(2000)
Exp. Eye Res.
, vol.71
, pp. 195-207
-
-
Hanson, S.R.A.1
Hasan, A.2
Smith, D.L.3
Smith, J.B.4
-
5
-
-
52449116005
-
UV-B-induced damage to the lens in vitro: Prevention by caffeine
-
Varma, S. D., Hegde, K. R., and Kovtun, S. (2008) UV-B-induced damage to the lens in vitro: prevention by caffeine Journal of ocular pharmacology and therapeutics: the official journal of the Association for Ocular Pharmacology and Therapeutics 24, 439-444
-
(2008)
Journal of Ocular Pharmacology and Therapeutics: The Official Journal of the Association for Ocular Pharmacology and Therapeutics
, vol.24
, pp. 439-444
-
-
Varma, S.D.1
Hegde, K.R.2
Kovtun, S.3
-
6
-
-
84875793902
-
UV-radiation Induced Disruption of Dry-Cavities in Human gammaD-Crystallin Results in Decreased Stability and Faster Unfolding
-
Xia, Z., Yang, Z., Huynh, T., King, J. A., and Zhou, R. (2013) UV-radiation Induced Disruption of Dry-Cavities in Human gammaD-Crystallin Results in Decreased Stability and Faster Unfolding Sci. Rep. 3, 1560
-
(2013)
Sci. Rep.
, vol.3
, pp. 1560
-
-
Xia, Z.1
Yang, Z.2
Huynh, T.3
King, J.A.4
Zhou, R.5
-
7
-
-
0035473032
-
Photo-oxidation of proteins and its role in cataractogenesis
-
Davies, M. J. and Truscott, R. J. W. (2001) Photo-oxidation of proteins and its role in cataractogenesis J. Photochem. Photobiol. B: Biol. 63, 114-125
-
(2001)
J. Photochem. Photobiol. B: Biol.
, vol.63
, pp. 114-125
-
-
Davies, M.J.1
Truscott, R.J.W.2
-
8
-
-
0026902240
-
Analysis of photo-oxidized amino acids in tryptic peptides of calf lens γ-ii Crystallin
-
Hott, J. L. and Borkman, R. F. (1992) Analysis of photo-oxidized amino acids in tryptic peptides of calf lens γ-ii Crystallin Photochem. Photobiol. 56, 257-262
-
(1992)
Photochem. Photobiol.
, vol.56
, pp. 257-262
-
-
Hott, J.L.1
Borkman, R.F.2
-
9
-
-
0029119635
-
Photodegradation of tryptophan residues and attenuation of molecular chaperone activity in α-crystallin are correlated
-
Schauerte, J. A. and Gafni, A. (1995) Photodegradation of tryptophan residues and attenuation of molecular chaperone activity in α-crystallin are correlated Biochem. Biophys. Res. Commun. 212, 900-905
-
(1995)
Biochem. Biophys. Res. Commun.
, vol.212
, pp. 900-905
-
-
Schauerte, J.A.1
Gafni, A.2
-
10
-
-
78650762942
-
Examining the influence of ultraviolet C irradiation on recombinant human γd-Crystallin
-
Wang, S. S.-S. and Wen, W.-S. (2010) Examining the influence of ultraviolet C irradiation on recombinant human γD-Crystallin Mol. Vis. 16, 2777-2790
-
(2010)
Mol. Vis.
, vol.16
, pp. 2777-2790
-
-
Wang, S.S.-S.1
Wen, W.-S.2
-
11
-
-
35648932100
-
Post-translational modifications in the nuclear region of young, aged, and cataract human lenses
-
Hains, P. G. and Truscott, R. J. (2007) Post-translational modifications in the nuclear region of young, aged, and cataract human lenses J. Proteome Res. 6, 3935-3943
-
(2007)
J. Proteome Res.
, vol.6
, pp. 3935-3943
-
-
Hains, P.G.1
Truscott, R.J.2
-
12
-
-
0037492957
-
Molecular dynamics study of early events during photooxidation of eye lens protein γb-Crystallin
-
Kubiak, K., Kowalska, M., and Nowak, W. (2003) Molecular dynamics study of early events during photooxidation of eye lens protein γB-Crystallin THEOCHEM 630, 315-325
-
(2003)
THEOCHEM
, vol.630
, pp. 315-325
-
-
Kubiak, K.1
Kowalska, M.2
Nowak, W.3
-
13
-
-
0025506306
-
The reaction of singlet oxygen with proteins, with special reference to crystallins
-
Balasubramanian, D., Du, X., and Zigler, J. S. (1990) The reaction of singlet oxygen with proteins, with special reference to crystallins Photochem. Photobiol. 52, 761-768
-
(1990)
Photochem. Photobiol.
, vol.52
, pp. 761-768
-
-
Balasubramanian, D.1
Du, X.2
Zigler, J.S.3
-
14
-
-
38449111855
-
Formation of amyloid fibrils in vitro by human γd-Crystallin and its isolated domains
-
Papanikolopoulou, K., Mills-Henry, I., Tho, S. L., Wang, Y. T., Gross, A. A. R., Kirschner, D. A., Decatur, S. M., and King, J. (2008) Formation of amyloid fibrils in vitro by human γD-Crystallin and its isolated domains Mol. Vis. 14, 81-89
-
(2008)
Mol. Vis.
, vol.14
, pp. 81-89
-
-
Papanikolopoulou, K.1
Mills-Henry, I.2
Tho, S.L.3
Wang, Y.T.4
Gross, A.A.R.5
Kirschner, D.A.6
Decatur, S.M.7
King, J.8
-
15
-
-
84857746675
-
Two-dimensional IR spectroscopy and segmental 13C labeling reveals the domain structure of human gammaD-Crystallin amyloid fibrils
-
Moran, S. D., Woys, A. M., Buchanan, L. E., Bixby, E., Decatur, S. M., and Zanni, M. T. (2012) Two-dimensional IR spectroscopy and segmental 13C labeling reveals the domain structure of human gammaD-Crystallin amyloid fibrils Proc. Natl. Acad. Sci. U. S. A. 109, 3329-3334
-
(2012)
Proc. Natl. Acad. Sci. U. S. A.
, vol.109
, pp. 3329-3334
-
-
Moran, S.D.1
Woys, A.M.2
Buchanan, L.E.3
Bixby, E.4
Decatur, S.M.5
Zanni, M.T.6
-
16
-
-
78650088761
-
Structures of differently aggregated and precipitated forms of γb Crystallin: An FTIR spectroscopic and em study
-
Fatima, U., Sharma, S., and Guptasarma, P. (2010) Structures of differently aggregated and precipitated forms of γB Crystallin: an FTIR spectroscopic and EM study Protein Pept. Lett. 17, 1155-1162
-
(2010)
Protein Pept. Lett.
, vol.17
, pp. 1155-1162
-
-
Fatima, U.1
Sharma, S.2
Guptasarma, P.3
-
17
-
-
58149506229
-
Crystallin proteins and amyloid fibrils
-
Ecroyd, H. and Carver, J. A. (2009) Crystallin proteins and amyloid fibrils Cell. Mol. Life Sci. 66, 62-81
-
(2009)
Cell. Mol. Life Sci.
, vol.66
, pp. 62-81
-
-
Ecroyd, H.1
Carver, J.A.2
-
18
-
-
0037372175
-
In vitro unfolding, refolding, and polymerization of human γd Crystallin, a protein involved in cataract formation
-
Kosinski-Collins, M. S. and King, J. (2003) In vitro unfolding, refolding, and polymerization of human γD Crystallin, a protein involved in cataract formation Protein Sci. 12, 480-490
-
(2003)
Protein Sci.
, vol.12
, pp. 480-490
-
-
Kosinski-Collins, M.S.1
King, J.2
-
19
-
-
0942276377
-
Amyloid fibril formation by lens Crystallin proteins and its implications for cataract formation
-
Meehan, S., Berry, Y., Luisi, B., Dobson, C. M., Carver, J. A., and MacPhee, C. E. (2004) Amyloid fibril formation by lens Crystallin proteins and its implications for cataract formation J. Biol. Chem. 279, 3413-3419
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 3413-3419
-
-
Meehan, S.1
Berry, Y.2
Luisi, B.3
Dobson, C.M.4
Carver, J.A.5
MacPhee, C.E.6
-
20
-
-
77449100085
-
Formation of amyloid fibrils in vitro from partially unfolded intermediates of human γc-Crystallin
-
Wang, Y., Petty, S., Trojanowski, A., Knee, K., Goulet, D., Mukerji, I., and King, J. (2010) Formation of amyloid fibrils in vitro from partially unfolded intermediates of human γC-Crystallin Invest. Ophthalmol. Vis. Sci. 51, 672-678
-
(2010)
Invest. Ophthalmol. Vis. Sci.
, vol.51
, pp. 672-678
-
-
Wang, Y.1
Petty, S.2
Trojanowski, A.3
Knee, K.4
Goulet, D.5
Mukerji, I.6
King, J.7
-
21
-
-
84868549643
-
Structural and sequence analysis of the human gammaD-crystallin amyloid fibril core using 2D IR spectroscopy, segmental (13)C labeling, and mass spectrometry
-
Moran, S. D., Decatur, S. M., and Zanni, M. T. (2012) Structural and sequence analysis of the human gammaD-crystallin amyloid fibril core using 2D IR spectroscopy, segmental (13)C labeling, and mass spectrometry, J. Am. Chem. Soc.
-
(2012)
J. Am. Chem. Soc.
-
-
Moran, S.D.1
Decatur, S.M.2
Zanni, M.T.3
-
22
-
-
66049087099
-
Mechanism of the very efficient quenching of tryptophan fluorescence in human γd- and γs-crystallins: The γ-crystallin fold may have evolved to protect tryptophan residues from ultraviolet photodamage
-
Chen, J., Callis, P. R., and King, J. (2009) Mechanism of the very efficient quenching of tryptophan fluorescence in human γD- and γS-crystallins: the γ-crystallin fold may have evolved to protect tryptophan residues from ultraviolet photodamage Biochemistry 48, 3708-3716
-
(2009)
Biochemistry
, vol.48
, pp. 3708-3716
-
-
Chen, J.1
Callis, P.R.2
King, J.3
-
23
-
-
33749005139
-
Mechanism of the highly efficient quenching of tryptophan fluorescence in human gammaD-Crystallin
-
Chen, J., Flaugh, S. L., Callis, P. R., and King, J. (2006) Mechanism of the highly efficient quenching of tryptophan fluorescence in human gammaD-Crystallin Biochemistry 45, 11552-11563
-
(2006)
Biochemistry
, vol.45
, pp. 11552-11563
-
-
Chen, J.1
Flaugh, S.L.2
Callis, P.R.3
King, J.4
-
24
-
-
70450161122
-
Femtosecond fluorescence spectra of tryptophan in human gamma-Crystallin mutants: Site-dependent ultrafast quenching
-
Xu, J., Chen, J., Toptygin, D., Tcherkasskaya, O., Callis, P., King, J., Brand, L., and Knutson, J. R. (2009) Femtosecond fluorescence spectra of tryptophan in human gamma-Crystallin mutants: site-dependent ultrafast quenching J. Am. Chem. Soc. 131, 16751-16757
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 16751-16757
-
-
Xu, J.1
Chen, J.2
Toptygin, D.3
Tcherkasskaya, O.4
Callis, P.5
King, J.6
Brand, L.7
Knutson, J.R.8
-
25
-
-
34548337296
-
Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
-
Xu, G. and Chance, M. R. (2007) Hydroxyl radical-mediated modification of proteins as probes for structural proteomics Chem. Rev. 107, 3514-3543
-
(2007)
Chem. Rev.
, vol.107
, pp. 3514-3543
-
-
Xu, G.1
Chance, M.R.2
-
26
-
-
77956230598
-
Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy
-
Middleton, C. T., Woys, A. M., Mukherjee, S. S., and Zanni, M. T. (2010) Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy Methods 52, 12-22
-
(2010)
Methods
, vol.52
, pp. 12-22
-
-
Middleton, C.T.1
Woys, A.M.2
Mukherjee, S.S.3
Zanni, M.T.4
-
27
-
-
77949462322
-
Estimation of UV-B irradiation from total global solar meteorological data in central Spain
-
Bilbao, J. and de Miguel, A. (2010) Estimation of UV-B irradiation from total global solar meteorological data in central Spain, J. Geophys. Res. 115.
-
(2010)
J. Geophys. Res.
, vol.115
-
-
Bilbao, J.1
De Miguel, A.2
-
28
-
-
33745728806
-
Characterisation of photo-oxidation products within photoyellowed wool proteins: Tryptophan and tyrosine derived chromophores
-
Dyer, J. M., Bringans, S. D., and Bryson, W. G. (2006) Characterisation of photo-oxidation products within photoyellowed wool proteins: tryptophan and tyrosine derived chromophores Photochem. Photobiol. Sci. 5, 698-706
-
(2006)
Photochem. Photobiol. Sci.
, vol.5
, pp. 698-706
-
-
Dyer, J.M.1
Bringans, S.D.2
Bryson, W.G.3
-
29
-
-
0037449145
-
High-resolution X-ray Crystal Structures of Human γd Crystallin (1.25 Å) and the R58H Mutant (1.15 Å) Associated with Aculeiform Cataract
-
Basak, A., Bateman, O., Slingsby, C., Pande, A., Asherie, N., Ogun, O., Benedek, G. B., and Pande, J. (2003) High-resolution X-ray Crystal Structures of Human γD Crystallin (1.25 Å) and the R58H Mutant (1.15 Å) Associated with Aculeiform Cataract J. Mol. Biol. 328, 1137-1147
-
(2003)
J. Mol. Biol.
, vol.328
, pp. 1137-1147
-
-
Basak, A.1
Bateman, O.2
Slingsby, C.3
Pande, A.4
Asherie, N.5
Ogun, O.6
Benedek, G.B.7
Pande, J.8
-
30
-
-
84989712905
-
The photophysics and photochemistry of the near-uv absorbing amino acids-i. Tryptophan and its simple derivatives
-
Creed, D. (1984) The photophysics and photochemistry of the near-uv absorbing amino acids-i. tryptophan and its simple derivatives Photochem. Photobiol. 39, 537-562
-
(1984)
Photochem. Photobiol.
, vol.39
, pp. 537-562
-
-
Creed, D.1
-
31
-
-
34250781639
-
Protect from light: Photodegradation and protein biologics
-
Kerwin, B. A. and Remmele, R. L., Jr. (2007) Protect from light: photodegradation and protein biologics J. Pharm. Sci. 96, 1468-1479
-
(2007)
J. Pharm. Sci.
, vol.96
, pp. 1468-1479
-
-
Kerwin, B.A.1
Remmele Jr., R.L.2
-
32
-
-
0014771842
-
Photochemical reactions in amino acid residues and inactivation of enzymes during U.V.-irradiation. A review
-
Vladimirov, Y. A., Roshchupkin, D. I., and Fesenko, E. E. (1970) Photochemical reactions in amino acid residues and inactivation of enzymes during U.V.-irradiation. A review Photochem. Photobiol. 11, 227-246
-
(1970)
Photochem. Photobiol.
, vol.11
, pp. 227-246
-
-
Vladimirov, Y.A.1
Roshchupkin, D.I.2
Fesenko, E.E.3
-
33
-
-
0030610813
-
1La and 1Lb transitions of tryptophan: Applications of theory and experimental observations to fluorescence of proteins
-
In (Ludwig Brand, M. L. J. Ed.) pp, Academic Press
-
Callis, P. R. (1997) 1La and 1Lb transitions of tryptophan: Applications of theory and experimental observations to fluorescence of proteins, In Methods in Enzymology (Ludwig Brand, M. L. J., Ed.) pp 113-150, Academic Press.
-
(1997)
Methods in Enzymology
, pp. 113-150
-
-
Callis, P.R.1
-
34
-
-
66349091586
-
Mapping protein-protein interactions by localized oxidation: Consequences of the reach of hydroxyl radical
-
Cheal, S. M., Ng, M., Barrios, B., Miao, Z., Kalani, A. K., and Meares, C. F. (2009) Mapping protein-protein interactions by localized oxidation: consequences of the reach of hydroxyl radical Biochemistry 48, 4577-4586
-
(2009)
Biochemistry
, vol.48
, pp. 4577-4586
-
-
Cheal, S.M.1
Ng, M.2
Barrios, B.3
Miao, Z.4
Kalani, A.K.5
Meares, C.F.6
-
35
-
-
34548337296
-
Hydroxyl radical-mediated modification of proteins as probes for structural proteomics
-
Xu, G. and Chance, M. R. (2007) Hydroxyl radical-mediated modification of proteins as probes for structural proteomics Chem. Rev. 107, 3514-3543
-
(2007)
Chem. Rev.
, vol.107
, pp. 3514-3543
-
-
Xu, G.1
Chance, M.R.2
-
36
-
-
77952320068
-
Molecular mechanism of Thioflavin-T binding to amyloid fibrils
-
Biancalana, M. and Koide, S. (2010) Molecular mechanism of Thioflavin-T binding to amyloid fibrils Biochim. Biophys. Acta 1804, 1405-1412
-
(2010)
Biochim. Biophys. Acta
, vol.1804
, pp. 1405-1412
-
-
Biancalana, M.1
Koide, S.2
-
37
-
-
84860232628
-
Two-dimensional infrared spectroscopy reveals the complex behaviour of an amyloid fibril inhibitor
-
Middleton, C. T., Marek, P., Cao, P., Chiu, C. C., Singh, S., Woys, A. M., de Pablo, J. J., Raleigh, D. P., and Zanni, M. T. (2012) Two-dimensional infrared spectroscopy reveals the complex behaviour of an amyloid fibril inhibitor Nat. Chem. 4, 355-360
-
(2012)
Nat. Chem.
, vol.4
, pp. 355-360
-
-
Middleton, C.T.1
Marek, P.2
Cao, P.3
Chiu, C.C.4
Singh, S.5
Woys, A.M.6
De Pablo, J.J.7
Raleigh, D.P.8
Zanni, M.T.9
-
38
-
-
78049308448
-
Protein-induced photophysical changes to the amyloid indicator dye thioflavin T
-
Wolfe, L. S., Calabrese, M. F., Nath, A., Blaho, D. V., Miranker, A. D., and Xiong, Y. (2010) Protein-induced photophysical changes to the amyloid indicator dye thioflavin T Proc. Natl. Acad. Sci. 107, 16863-16868
-
(2010)
Proc. Natl. Acad. Sci.
, vol.107
, pp. 16863-16868
-
-
Wolfe, L.S.1
Calabrese, M.F.2
Nath, A.3
Blaho, D.V.4
Miranker, A.D.5
Xiong, Y.6
-
39
-
-
84877014623
-
A strongly absorbing class of non-natural labels for probing protein electrostatics and solvation with FTIR and 2D IR spectroscopies
-
Woys, A. M., Mukherjee, S. S., Skoff, D. R., Moran, S. D., and Zanni, M. T. (2013) A strongly absorbing class of non-natural labels for probing protein electrostatics and solvation with FTIR and 2D IR spectroscopies J. Phys. Chem. B 117, 5009-18
-
(2013)
J. Phys. Chem. B
, vol.117
, pp. 5009-5018
-
-
Woys, A.M.1
Mukherjee, S.S.2
Skoff, D.R.3
Moran, S.D.4
Zanni, M.T.5
-
40
-
-
84864448462
-
Deamidation accelerates amyloid formation and alters amylin fiber structure
-
Dunkelberger, E. B., Buchanan, L. E., Marek, P., Cao, P., Raleigh, D. P., and Zanni, M. T. (2012) Deamidation accelerates amyloid formation and alters amylin fiber structure J. Am. Chem. Soc. 134, 12658-12667
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 12658-12667
-
-
Dunkelberger, E.B.1
Buchanan, L.E.2
Marek, P.3
Cao, P.4
Raleigh, D.P.5
Zanni, M.T.6
-
41
-
-
33744807435
-
Two-dimensional infrared spectroscopy displays signatures of structural ordering in peptide aggregates
-
Londergan, C. H., Wang, J., Axelsen, P. H., and Hochstrasser, R. M. (2006) Two-dimensional infrared spectroscopy displays signatures of structural ordering in peptide aggregates Biophys. J. 90, 4672-4685
-
(2006)
Biophys. J.
, vol.90
, pp. 4672-4685
-
-
Londergan, C.H.1
Wang, J.2
Axelsen, P.H.3
Hochstrasser, R.M.4
-
42
-
-
70449584579
-
2D IR provides evidence for mobile water molecules in β-amyloid fibrils
-
Kim, Y. S., Liu, L., Axelsen, P. H., and Hochstrasser, R. M. (2009) 2D IR provides evidence for mobile water molecules in β-amyloid fibrils Proc. Natl. Acad. Sci. U.S.A. 106, 17751-17756
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 17751-17756
-
-
Kim, Y.S.1
Liu, L.2
Axelsen, P.H.3
Hochstrasser, R.M.4
-
43
-
-
79957962090
-
Residue-specific vibrational echoes yield 3D structures of a transmembrane helix dimer
-
Remorino, A., Korendovych, I. V., Wu, Y., DeGrado, W. F., and Hochstrasser, R. M. (2011) Residue-specific vibrational echoes yield 3D structures of a transmembrane helix dimer Science 332, 1206-1209
-
(2011)
Science
, vol.332
, pp. 1206-1209
-
-
Remorino, A.1
Korendovych, I.V.2
Wu, Y.3
Degrado, W.F.4
Hochstrasser, R.M.5
-
44
-
-
80053492187
-
2DIR spectroscopy of human amylin fibrils reflects stable beta-sheet structure
-
Wang, L., Middleton, C. T., Singh, S., Reddy, A. S., Woys, A. M., Strasfeld, D. B., Marek, P., Raleigh, D. P., de Pablo, J. J., Zanni, M. T., and Skinner, J. L. (2011) 2DIR spectroscopy of human amylin fibrils reflects stable beta-sheet structure J. Am. Chem. Soc. 133, 16062-16071
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 16062-16071
-
-
Wang, L.1
Middleton, C.T.2
Singh, S.3
Reddy, A.S.4
Woys, A.M.5
Strasfeld, D.B.6
Marek, P.7
Raleigh, D.P.8
De Pablo, J.J.9
Zanni, M.T.10
Skinner, J.L.11
-
45
-
-
59649114004
-
Gating mechanism of the influenza A M2 channel revealed by 1D and 2D IR spectroscopies
-
Manor, J., Mukherjee, P., Lin, Y. S., Leonov, H., Skinner, J. L., Zanni, M. T., and Arkin, I. T. (2009) Gating mechanism of the influenza A M2 channel revealed by 1D and 2D IR spectroscopies Structure 17, 247-254
-
(2009)
Structure
, vol.17
, pp. 247-254
-
-
Manor, J.1
Mukherjee, P.2
Lin, Y.S.3
Leonov, H.4
Skinner, J.L.5
Zanni, M.T.6
Arkin, I.T.7
-
46
-
-
33644872200
-
Picosecond dynamics of a membrane protein revealed by 2D IR
-
Mukherjee, P., Kass, I., Arkin, I. T., and Zanni, M. T. (2006) Picosecond dynamics of a membrane protein revealed by 2D IR Proc. Natl. Acad. Sci. U.S.A. 103, 3528-3533
-
(2006)
Proc. Natl. Acad. Sci. U.S.A.
, vol.103
, pp. 3528-3533
-
-
Mukherjee, P.1
Kass, I.2
Arkin, I.T.3
Zanni, M.T.4
-
47
-
-
66149084447
-
Two-dimensional IR spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific resolution
-
Shim, S. H., Gupta, R., Ling, Y. L., Strasfeld, D. B., Raleigh, D. P., and Zanni, M. T. (2009) Two-dimensional IR spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific resolution Proc. Natl. Acad. Sci. U.S.A. 106, 6614-6619
-
(2009)
Proc. Natl. Acad. Sci. U.S.A.
, vol.106
, pp. 6614-6619
-
-
Shim, S.H.1
Gupta, R.2
Ling, Y.L.3
Strasfeld, D.B.4
Raleigh, D.P.5
Zanni, M.T.6
-
48
-
-
77649318852
-
2D IR line shapes probe ovispirin peptide conformation and depth in lipid bilayers
-
Woys, A. M., Lin, Y. S., Reddy, A. S., Xiong, W., de Pablo, J. J., Skinner, J. L., and Zanni, M. T. (2010) 2D IR line shapes probe ovispirin peptide conformation and depth in lipid bilayers J. Am. Chem. Soc. 132, 2832-2838
-
(2010)
J. Am. Chem. Soc.
, vol.132
, pp. 2832-2838
-
-
Woys, A.M.1
Lin, Y.S.2
Reddy, A.S.3
Xiong, W.4
De Pablo, J.J.5
Skinner, J.L.6
Zanni, M.T.7
-
49
-
-
71549122584
-
Strategies for extracting structural information from 2D IR spectroscopy of amyloid: Application to islet amyloid polypeptide
-
Strasfeld, D. B., Ling, Y. L., Gupta, R., Raleigh, D. P., and Zanni, M. T. (2009) Strategies for extracting structural information from 2D IR spectroscopy of amyloid: application to islet amyloid polypeptide J. Phys. Chem. B 113, 15679-15691
-
(2009)
J. Phys. Chem. B
, vol.113
, pp. 15679-15691
-
-
Strasfeld, D.B.1
Ling, Y.L.2
Gupta, R.3
Raleigh, D.P.4
Zanni, M.T.5
-
50
-
-
84884244008
-
-
Submitted
-
Lam, A. R., Moran, S. D., Preketes, N. K., Zhang, T. O., Zanni, M. T., and Mukamel, S. (2013) Study of the γD-Crystallin Protein Using Two-Dimensional Infrared (2D IR) Spectroscopy: Experiment and Simulation, Submitted.
-
(2013)
Study of the γd-Crystallin Protein Using Two-Dimensional Infrared (2D IR) Spectroscopy: Experiment and Simulation
-
-
Lam, A.R.1
Moran, S.D.2
Preketes, N.K.3
Zhang, T.O.4
Zanni, M.T.5
Mukamel, S.6
-
51
-
-
24644503134
-
Characteristic two-dimensional IR spectroscopic features of antiparallel and parallel beta-sheet polypeptides: Simulation studies
-
Hahn, S., Kim, S. S., Lee, C., and Cho, M. (2005) Characteristic two-dimensional IR spectroscopic features of antiparallel and parallel beta-sheet polypeptides: simulation studies J. Chem. Phys. 123, 084905
-
(2005)
J. Chem. Phys.
, vol.123
, pp. 084905
-
-
Hahn, S.1
Kim, S.S.2
Lee, C.3
Cho, M.4
-
52
-
-
84874227957
-
Folding of a heterogeneous β-hairpin peptide from temperature-jump 2D IR spectroscopy
-
Jones, K. C., Peng, C. S., and Tokmakoff, A. (2013) Folding of a heterogeneous β-hairpin peptide from temperature-jump 2D IR spectroscopy Proc. Natl. Acad. Sci. U.S.A. 110, 2828-2833
-
(2013)
Proc. Natl. Acad. Sci. U.S.A.
, vol.110
, pp. 2828-2833
-
-
Jones, K.C.1
Peng, C.S.2
Tokmakoff, A.3
-
53
-
-
2442589387
-
Signatures of beta-sheet secondary structures in linear and two-dimensional infrared spectroscopy
-
Cheatum, C. M., Tokmakoff, A., and Knoester, J. (2004) Signatures of beta-sheet secondary structures in linear and two-dimensional infrared spectroscopy J. Chem. Phys. 120, 8201-8215
-
(2004)
J. Chem. Phys.
, vol.120
, pp. 8201-8215
-
-
Cheatum, C.M.1
Tokmakoff, A.2
Knoester, J.3
-
54
-
-
84869428877
-
Parallel β-sheet vibrational couplings revealed by 2D IR spectroscopy of an isotopically labeled macrocycle: Quantitative benchmark for the interpretation of amyloid and protein infrared spectra
-
Woys, A. M., Almeida, A. M., Wang, L., Chiu, C.-C., McGovern, M., de Pablo, J. J., Skinner, J. L., Gellman, S. H., and Zanni, M. T. (2012) Parallel β-sheet vibrational couplings revealed by 2D IR spectroscopy of an isotopically labeled macrocycle: quantitative benchmark for the interpretation of amyloid and protein infrared spectra J. Am. Chem. Soc. 134, 19118-19128
-
(2012)
J. Am. Chem. Soc.
, vol.134
, pp. 19118-19128
-
-
Woys, A.M.1
Almeida, A.M.2
Wang, L.3
Chiu, C.-C.4
McGovern, M.5
De Pablo, J.J.6
Skinner, J.L.7
Gellman, S.H.8
Zanni, M.T.9
-
55
-
-
84859612417
-
Environment polarity in proteins mapped noninvasively by FTIR spectroscopy
-
Manor, J., Feldblum, E. S., Zanni, M. T., and Arkin, I. T. (2012) Environment polarity in proteins mapped noninvasively by FTIR spectroscopy J. Phys. Chem. Lett. 3, 939-944
-
(2012)
J. Phys. Chem. Lett.
, vol.3
, pp. 939-944
-
-
Manor, J.1
Feldblum, E.S.2
Zanni, M.T.3
Arkin, I.T.4
-
56
-
-
84867200449
-
Photoinduced fibrils formation of chicken egg white lysozyme under native conditions
-
Xie, J.-B., Cao, Y., Pan, H., Qin, M., Yan, Z.-Q., Xiong, X., and Wang, W. (2012) Photoinduced fibrils formation of chicken egg white lysozyme under native conditions Proteins: Struct., Funct., Bioinformatics 80, 2501-2513
-
(2012)
Proteins: Struct., Funct., Bioinformatics
, vol.80
, pp. 2501-2513
-
-
Xie, J.-B.1
Cao, Y.2
Pan, H.3
Qin, M.4
Yan, Z.-Q.5
Xiong, X.6
Wang, W.7
-
57
-
-
79960102984
-
Mechanistic insight of photo-induced aggregation of chicken egg white lysozyme: The interplay between hydrophobic interactions and formation of intermolecular disulfide bonds
-
Xie, J., Qin, M., Cao, Y., and Wang, W. (2011) Mechanistic insight of photo-induced aggregation of chicken egg white lysozyme: The interplay between hydrophobic interactions and formation of intermolecular disulfide bonds Proteins: Struct., Funct., Bioinformatics 79, 2505-2516
-
(2011)
Proteins: Struct., Funct., Bioinformatics
, vol.79
, pp. 2505-2516
-
-
Xie, J.1
Qin, M.2
Cao, Y.3
Wang, W.4
-
58
-
-
0014005430
-
Nonenzymatic cleavage of tryptophyl peptide bonds in peptides and proteins: I. Cleavage of C-tryptophyl peptide bonds in model peptides through their conversion into N′-formylkynurenine derivatives
-
Previero, A., Coletti Previero, M. A., and Jollès, P. (1966) Nonenzymatic cleavage of tryptophyl peptide bonds in peptides and proteins: I. Cleavage of C-tryptophyl peptide bonds in model peptides through their conversion into N′-formylkynurenine derivatives Biochem. Biophys. Res. Commun. 22, 17-21
-
(1966)
Biochem. Biophys. Res. Commun.
, vol.22
, pp. 17-21
-
-
Previero, A.1
Coletti Previero, M.A.2
Jollès, P.3
-
59
-
-
0017405973
-
Selective chemical cleavage of the peptide bond at N'-formylkynurenine in ozone-oxidized hen egg-white lysozyme
-
Sakiyama, F. (1977) Selective chemical cleavage of the peptide bond at N'-formylkynurenine in ozone-oxidized hen egg-white lysozyme J. Biochem. 82, 365-375
-
(1977)
J. Biochem.
, vol.82
, pp. 365-375
-
-
Sakiyama, F.1
-
60
-
-
23644457960
-
Interdomain side-chain interactions in human γd Crystallin influencing folding and stability
-
Flaugh, S. L., Kosinski-Collins, M. S., and King, J. (2005) Interdomain side-chain interactions in human γD Crystallin influencing folding and stability Protein Sci. 14, 2030-2043
-
(2005)
Protein Sci.
, vol.14
, pp. 2030-2043
-
-
Flaugh, S.L.1
Kosinski-Collins, M.S.2
King, J.3
-
61
-
-
78751691643
-
Separating instability from aggregation propensity in gammaS-Crystallin variants
-
Brubaker, W. D., Freites, J. A., Golchert, K. J., Shapiro, R. A., Morikis, V., Tobias, D. J., and Martin, R. W. (2011) Separating instability from aggregation propensity in gammaS-Crystallin variants Biophys. J. 100, 498-506
-
(2011)
Biophys. J.
, vol.100
, pp. 498-506
-
-
Brubaker, W.D.1
Freites, J.A.2
Golchert, K.J.3
Shapiro, R.A.4
Morikis, V.5
Tobias, D.J.6
Martin, R.W.7
-
62
-
-
0029994346
-
Characterization of three isoforms of a 9 kDa γd-crystallin fragment isolated from human lenses
-
Srivastava, O. P. and Srivastava, K. (1996) Characterization of three isoforms of a 9 kDa γD-crystallin fragment isolated from human lenses Exp. Eye Res. 62, 593-604
-
(1996)
Exp. Eye Res.
, vol.62
, pp. 593-604
-
-
Srivastava, O.P.1
Srivastava, K.2
-
63
-
-
18744404774
-
Altered aggregation properties of mutant γ-crystallins cause inherited cataract
-
Sandilands, A., Hutcheson, A. M., Long, H. A., Prescott, A. R., Vrensen, G., Löster, J., Klopp, N., Lutz, R. B., Graw, J., Masaki, S., Dobson, C. M., MacPhee, C. E., and Quinlan, R. A. (2002) Altered aggregation properties of mutant γ-crystallins cause inherited cataract EMBO J. 21, 6005-6014
-
(2002)
EMBO J.
, vol.21
, pp. 6005-6014
-
-
Sandilands, A.1
Hutcheson, A.M.2
Long, H.A.3
Prescott, A.R.4
Vrensen, G.5
Löster, J.6
Klopp, N.7
Lutz, R.B.8
Graw, J.9
Masaki, S.10
Dobson, C.M.11
MacPhee, C.E.12
Quinlan, R.A.13
-
64
-
-
0036093256
-
Novel mutations in the γ-Crystallin genes cause autosomal dominant congenital cataracts
-
Santhiya, S. T., Shyam Manohar, M., Rawlley, D., Vijayalakshmi, P., Namperumalsamy, P., Gopinath, P. M., Löster, J., and Graw, J. (2002) Novel mutations in the γ-Crystallin genes cause autosomal dominant congenital cataracts J. Med. Genetics 39, 352-358
-
(2002)
J. Med. Genetics
, vol.39
, pp. 352-358
-
-
Santhiya, S.T.1
Shyam Manohar, M.2
Rawlley, D.3
Vijayalakshmi, P.4
Namperumalsamy, P.5
Gopinath, P.M.6
Löster, J.7
Graw, J.8
-
65
-
-
13044250483
-
Progressive juvenile-onset punctate cataracts caused by mutation of the γd-Crystallin gene
-
Stephan, D. A., Gillanders, E., Vanderveen, D., Freas-Lutz, D., Wistow, G., Baxevanis, A. D., Robbins, C. M., Van Auken, A., Quesenberry, M. I., Bailey-Wilson, J., Juo, S.-H. H., Trent, J. M., Smith, L., and Brownstein, M. J. (1999) Progressive juvenile-onset punctate cataracts caused by mutation of the γD-Crystallin gene Proc. Natl. Acad. Sci. U.S.A. 96, 1008-1012
-
(1999)
Proc. Natl. Acad. Sci. U.S.A.
, vol.96
, pp. 1008-1012
-
-
Stephan, D.A.1
Gillanders, E.2
Vanderveen, D.3
Freas-Lutz, D.4
Wistow, G.5
Baxevanis, A.D.6
Robbins, C.M.7
Van Auken, A.8
Quesenberry, M.I.9
Bailey-Wilson, J.10
Juo, S.-H.H.11
Trent, J.M.12
Smith, L.13
Brownstein, M.J.14
-
66
-
-
4644325844
-
The P23T cataract mutation causes loss of solubility of folded γd-Crystallin
-
Evans, P., Wyatt, K., Wistow, G. J., Bateman, O. A., Wallace, B. A., and Slingsby, C. (2004) The P23T cataract mutation causes loss of solubility of folded γD-Crystallin J. Mol. Biol. 343, 435-444
-
(2004)
J. Mol. Biol.
, vol.343
, pp. 435-444
-
-
Evans, P.1
Wyatt, K.2
Wistow, G.J.3
Bateman, O.A.4
Wallace, B.A.5
Slingsby, C.6
-
67
-
-
77954384842
-
Residue-specific, real-time characterization of lag-phase species and fibril growth during amyloid formation: A combined fluorescence and IR study of p-cyanophenylalanine analogs of islet amyloid polypeptide
-
Marek, P., Mukherjee, S., Zanni, M. T., and Raleigh, D. P. (2010) Residue-specific, real-time characterization of lag-phase species and fibril growth during amyloid formation: a combined fluorescence and IR study of p-cyanophenylalanine analogs of islet amyloid polypeptide J. Mol. Biol. 400, 878-888
-
(2010)
J. Mol. Biol.
, vol.400
, pp. 878-888
-
-
Marek, P.1
Mukherjee, S.2
Zanni, M.T.3
Raleigh, D.P.4
-
69
-
-
35648997078
-
Folding and stability of the isolated Greek key domains of the long-lived human lens proteins gammaD-Crystallin and gammaS-Crystallin
-
Mills, I. A., Flaugh, S. L., Kosinski-Collins, M. S., and King, J. A. (2007) Folding and stability of the isolated Greek key domains of the long-lived human lens proteins gammaD-Crystallin and gammaS-Crystallin Protein Sci. 16, 2427-2444
-
(2007)
Protein Sci.
, vol.16
, pp. 2427-2444
-
-
Mills, I.A.1
Flaugh, S.L.2
Kosinski-Collins, M.S.3
King, J.A.4
-
70
-
-
79960584453
-
Aggregation of gamma-crystallins associated with human cataracts via domain swapping at the C-terminal beta-strands
-
Das, P., King, J. A., and Zhou, R. (2011) Aggregation of gamma-crystallins associated with human cataracts via domain swapping at the C-terminal beta-strands Proc. Natl. Acad. Sci. U.S.A. 108, 10514-10519
-
(2011)
Proc. Natl. Acad. Sci. U.S.A.
, vol.108
, pp. 10514-10519
-
-
Das, P.1
King, J.A.2
Zhou, R.3
-
71
-
-
3042546365
-
Two-dimensional infrared spectroscopy of antiparallel β-sheet secondary structure
-
Demirdöven, N., Cheatum, C. M., Chung, H. S., Khalil, M., Knoester, J., and Tokmakoff, A. (2004) Two-dimensional infrared spectroscopy of antiparallel β-sheet secondary structure J. Am. Chem. Soc. 126, 7981-7990
-
(2004)
J. Am. Chem. Soc.
, vol.126
, pp. 7981-7990
-
-
Demirdöven, N.1
Cheatum, C.M.2
Chung, H.S.3
Khalil, M.4
Knoester, J.5
Tokmakoff, A.6
-
72
-
-
80051950364
-
Proteomic analysis of human age-related nuclear cataracts and normal lens nuclei
-
Su, S., Liu, P., Zhang, H., Li, Z., Song, Z., Zhang, L., and Chen, S. (2011) Proteomic analysis of human age-related nuclear cataracts and normal lens nuclei Invest. Ophthalmol. Vis. Sci. 52, 4182-4191
-
(2011)
Invest. Ophthalmol. Vis. Sci.
, vol.52
, pp. 4182-4191
-
-
Su, S.1
Liu, P.2
Zhang, H.3
Li, Z.4
Song, Z.5
Zhang, L.6
Chen, S.7
-
73
-
-
34548041439
-
Characterisation of amyloid fibril formation by small heat-shock chaperone proteins human αa-, αb- and R120G αb-Crystallins
-
Meehan, S., Knowles, T. P. J., Baldwin, A. J., Smith, J. F., Squires, A. M., Clements, P., Treweek, T. M., Ecroyd, H., Tartaglia, G. G., Vendruscolo, M., MacPhee, C. E., Dobson, C. M., and Carver, J. A. (2007) Characterisation of amyloid fibril formation by small heat-shock chaperone proteins human αA-, αB- and R120G αB-Crystallins J. Mol. Biol. 372, 470-484
-
(2007)
J. Mol. Biol.
, vol.372
, pp. 470-484
-
-
Meehan, S.1
Knowles, T.P.J.2
Baldwin, A.J.3
Smith, J.F.4
Squires, A.M.5
Clements, P.6
Treweek, T.M.7
Ecroyd, H.8
Tartaglia, G.G.9
Vendruscolo, M.10
MacPhee, C.E.11
Dobson, C.M.12
Carver, J.A.13
-
74
-
-
0026650046
-
Identification of a 9 kDa γ-Crystallin fragment in human lenses
-
Srivastava, O. P., McEntire, J. E., and Srivastava, K. (1992) Identification of a 9 kDa γ-Crystallin fragment in human lenses Exp. Eye Res. 54, 893-901
-
(1992)
Exp. Eye Res.
, vol.54
, pp. 893-901
-
-
Srivastava, O.P.1
McEntire, J.E.2
Srivastava, K.3
-
75
-
-
0027984870
-
Covalent modification at the C-terminal end of a 9 kDa γd-Crystallin fragment in human lenses
-
Srivastava, O. P., Srivastava, K., and Silney, C. (1994) Covalent modification at the C-terminal end of a 9 kDa γD-Crystallin fragment in human lenses Exp. Eye Res. 58, 595-604
-
(1994)
Exp. Eye Res.
, vol.58
, pp. 595-604
-
-
Srivastava, O.P.1
Srivastava, K.2
Silney, C.3
-
76
-
-
43749091530
-
Significance of interactions of low molecular weight crystallin fragments in lens aging and cataract formation
-
Santhoshkumar, P., Udupa, P., Murugesan, R., and Sharma, K. K. (2008) Significance of interactions of low molecular weight crystallin fragments in lens aging and cataract formation J. Biol. Chem. 283, 8477-8485
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 8477-8485
-
-
Santhoshkumar, P.1
Udupa, P.2
Murugesan, R.3
Sharma, K.K.4
-
77
-
-
0030964928
-
Possible mechanism of exacerbating cataract formation in cataractous human lens capsules induced by systemic hypertension or glaucoma
-
Lee, S., Lin, S., Li, M., and Liang, R. (1997) Possible mechanism of exacerbating cataract formation in cataractous human lens capsules induced by systemic hypertension or glaucoma Ophthalmic Res. 29, 83-90
-
(1997)
Ophthalmic Res.
, vol.29
, pp. 83-90
-
-
Lee, S.1
Lin, S.2
Li, M.3
Liang, R.4
-
78
-
-
0037372175
-
In vitro unfolding, refolding, and polymerization of human γd Crystallin, a protein involved in cataract formation
-
Kosinski-Collins, M. S. and King, J. (2003) In vitro unfolding, refolding, and polymerization of human γD Crystallin, a protein involved in cataract formation Protein Sci. 12, 480-490
-
(2003)
Protein Sci.
, vol.12
, pp. 480-490
-
-
Kosinski-Collins, M.S.1
King, J.2
-
79
-
-
36749037242
-
Monitoring the prevention of amyloid fibril formation by α-Crystallin
-
Rekas, A., Jankova, L., Thorn, D. C., Cappai, R., and Carver, J. A. (2007) Monitoring the prevention of amyloid fibril formation by α-Crystallin FEBS J. 274, 6290-6304
-
(2007)
FEBS J.
, vol.274
, pp. 6290-6304
-
-
Rekas, A.1
Jankova, L.2
Thorn, D.C.3
Cappai, R.4
Carver, J.A.5
-
80
-
-
77954760090
-
Partially folded aggregation intermediates of human gammaD-, gammaC-, and gammaS-Crystallin are recognized and bound by human alphaB-Crystallin chaperone
-
Acosta-Sampson, L. and King, J. (2010) Partially folded aggregation intermediates of human gammaD-, gammaC-, and gammaS-Crystallin are recognized and bound by human alphaB-Crystallin chaperone J. Mol. Biol. 401, 134-152
-
(2010)
J. Mol. Biol.
, vol.401
, pp. 134-152
-
-
Acosta-Sampson, L.1
King, J.2
-
81
-
-
80053379382
-
Binding of the molecular chaperone αb-Crystallin to Aβ amyloid fibrils inhibits fibril elongation
-
Shammas, S. L., Waudby, C. A., Wang, S., Buell, A. K., Knowles, T. P. J., Ecroyd, H., Welland, M. E., Carver, J. A., Dobson, C. M., and Meehan, S. (2011) Binding of the molecular chaperone αB-Crystallin to Aβ amyloid fibrils inhibits fibril elongation Biophys. J. 101, 1681-1689
-
(2011)
Biophys. J.
, vol.101
, pp. 1681-1689
-
-
Shammas, S.L.1
Waudby, C.A.2
Wang, S.3
Buell, A.K.4
Knowles, T.P.J.5
Ecroyd, H.6
Welland, M.E.7
Carver, J.A.8
Dobson, C.M.9
Meehan, S.10
|