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Volumn 27, Issue 16, 2013, Pages 1821-1833

E3-ubiquitin ligase Nedd4 determines the fate of AID-associated RNA polymerase II in B cells

Author keywords

Activation induced deaminase; Immunoglobulin locus transcription; Nedd4; Noncoding RNA; RNA polymerase II stalling; RNA polymerase II ubiquitination

Indexed keywords

ACTIVATION INDUCED CYTIDINE DEAMINASE; BENZYLOXYCARBONYLLEUCYLLEUCYLLEUCINAL; DNA; IMMUNOGLOBULIN A; IMMUNOGLOBULIN G; RNA; RNA POLYMERASE II; UBIQUITIN PROTEIN LIGASE NEDD4;

EID: 84882566900     PISSN: 08909369     EISSN: 15495477     Source Type: Journal    
DOI: 10.1101/gad.210211.112     Document Type: Article
Times cited : (27)

References (62)
  • 2
    • 0020471790 scopus 로고
    • Multiple immunoglobulin heavy-chain gene transcripts in Abelson murine leukemia virus-transformed lymphoid cell lines
    • Alt F.W., Rosenberg N, Enea V, Siden E, Baltimore D. 1982. Multiple immunoglobulin heavy-chain gene transcripts in Abelson murine leukemia virus-transformed lymphoid cell lines. Mol Cell Biol 2: 386-400.
    • (1982) Mol Cell Biol , vol.2 , pp. 386-400
    • Alt, F.W.1    Rosenberg, N.2    Enea, V.3    Siden, E.4    Baltimore, D.5
  • 3
    • 35748950163 scopus 로고    scopus 로고
    • Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1
    • Anindya R., Aygun O, Svejstrup JQ. 2007. Damage-induced ubiquitylation of human RNA polymerase II by the ubiquitin ligase Nedd4, but not Cockayne syndrome proteins or BRCA1. Mol Cell 28: 386-397.
    • (2007) Mol Cell , vol.28 , pp. 386-397
    • Anindya, R.1    Aygun, O.2    Svejstrup, J.Q.3
  • 8
    • 45849153870 scopus 로고    scopus 로고
    • The HECT family of E3 ubiquitin ligases: Multiple players in cancer development
    • Bernassola F., Karin M, Ciechanover A, Melino G. 2008. The HECT family of E3 ubiquitin ligases: Multiple players in cancer development. Cancer Cell 14: 10-21.
    • (2008) Cancer Cell , vol.14 , pp. 10-21
    • Bernassola, F.1    Karin, M.2    Ciechanover, A.3    Melino, G.4
  • 9
    • 33646862623 scopus 로고    scopus 로고
    • The transcription elongation complex directs activation-induced cytidine deaminase-mediated DNA deamination
    • Besmer E., Market E, Papavasiliou FN. 2006. The transcription elongation complex directs activation-induced cytidine deaminase-mediated DNA deamination. Mol Cell Biol 26: 4378-4385.
    • (2006) Mol Cell Biol , vol.26 , pp. 4378-4385
    • Besmer, E.1    Market, E.2    Papavasiliou, F.N.3
  • 10
    • 34249057729 scopus 로고    scopus 로고
    • RNAi-dependent and-independent RNA turnover mechanisms contribute to heterochromatic gene silencing
    • Buhler M., Haas W, Gygi SP, Moazed D. 2007. RNAi-dependent and-independent RNA turnover mechanisms contribute to heterochromatic gene silencing. Cell 129: 707-721.
    • (2007) Cell , vol.129 , pp. 707-721
    • Buhler, M.1    Haas, W.2    Gygi, S.P.3    Moazed, D.4
  • 11
    • 0037452080 scopus 로고    scopus 로고
    • Transcription-targeted DNA deamination by the AID antibody diversification enzyme
    • Chaudhuri J., Tian M, Khuong C, Chua K, Pinaud E, Alt FW. 2003. Transcription-targeted DNA deamination by the AID antibody diversification enzyme. Nature 422: 726-730.
    • (2003) Nature , vol.422 , pp. 726-730
    • Chaudhuri, J.1    Tian, M.2    Khuong, C.3    Chua, K.4    Pinaud, E.5    Alt, F.W.6
  • 13
    • 84862666457 scopus 로고    scopus 로고
    • A movie of RNA polymerase II transcription
    • Cheung A.C., Cramer P. 2012. A movie of RNA polymerase II transcription. Cell 149: 1431-1437.
    • (2012) Cell , vol.149 , pp. 1431-1437
    • Cheung, A.C.1    Cramer, P.2
  • 16
    • 84872559920 scopus 로고    scopus 로고
    • Solubility-based genetic screen identifies RING finger protein 126 as an E3 ligase for activation-induced cytidine deaminase
    • Delker R.K., Zhou Y, Strikoudis A, Stebbins CE, Papavasiliou FN. 2013. Solubility-based genetic screen identifies RING finger protein 126 as an E3 ligase for activation-induced cytidine deaminase. Proc Natl Acad Sci 110: 1029-1034.
    • (2013) Proc Natl Acad Sci , vol.110 , pp. 1029-1034
    • Delker, R.K.1    Zhou, Y.2    Strikoudis, A.3    Stebbins, C.E.4    Papavasiliou, F.N.5
  • 17
    • 9644252776 scopus 로고    scopus 로고
    • APOBEC3G ubiquitination by Nedd4-1 favors its packaging into HIV-1 particles
    • Dussart S., Douaisi M, Courcoul M, Bessou G, Vigne R, Decroly E. 2005. APOBEC3G ubiquitination by Nedd4-1 favors its packaging into HIV-1 particles. J Mol Biol 345: 547-558.
    • (2005) J Mol Biol , vol.345 , pp. 547-558
    • Dussart, S.1    Douaisi, M.2    Courcoul, M.3    Bessou, G.4    Vigne, R.5    Decroly, E.6
  • 18
    • 84860324470 scopus 로고    scopus 로고
    • Roles for microRNAs in conferring robustness to biological processes
    • Ebert M.S., Sharp PA. 2012. Roles for microRNAs in conferring robustness to biological processes. Cell 149: 515-524.
    • (2012) Cell , vol.149 , pp. 515-524
    • Ebert, M.S.1    Sharp, P.A.2
  • 24
    • 84872287592 scopus 로고    scopus 로고
    • Regulation of AID, the B-cell genome mutator
    • Keim C., Kazadi D, Rothschild G, Basu U. 2013. Regulation of AID, the B-cell genome mutator. Genes Dev 27: 1-17.
    • (2013) Genes Dev , vol.27 , pp. 1-17
    • Keim, C.1    Kazadi, D.2    Rothschild, G.3    Basu, U.4
  • 25
    • 84865193126 scopus 로고    scopus 로고
    • AID targeting is dependent on RNA polymerase II pausing
    • Kenter AL. 2012. AID targeting is dependent on RNA polymerase II pausing. Semin Immunol 24: 281-286.
    • (2012) Semin Immunol , vol.24 , pp. 281-286
    • Kenter, A.L.1
  • 26
    • 0030761761 scopus 로고    scopus 로고
    • B lymphocytes of xeroderma pigmentosum or Cockayne syndrome patients with inherited defects in nucleotide excision repair are fully capable of somatic hypermutation of immunoglobulin genes
    • Kim N., Kage K, Matsuda F, Lefranc MP, Storb U. 1997. B lymphocytes of xeroderma pigmentosum or Cockayne syndrome patients with inherited defects in nucleotide excision repair are fully capable of somatic hypermutation of immunoglobulin genes. J Exp Med 186: 413-419.
    • (1997) J Exp Med , vol.186 , pp. 413-419
    • Kim, N.1    Kage, K.2    Matsuda, F.3    Lefranc, M.P.4    Storb, U.5
  • 27
    • 34547797940 scopus 로고    scopus 로고
    • A/T mutagenesis in hypermutated immunoglobulin genes strongly depends on PCNAK164 modification
    • Langerak P., Nygren AO, Krijger PH, van den Berk PC, Jacobs H. 2007. A/T mutagenesis in hypermutated immunoglobulin genes strongly depends on PCNAK164 modification. J Exp Med 204: 1989-1998.
    • (2007) J Exp Med , vol.204 , pp. 1989-1998
    • Langerak, P.1    Nygren, A.O.2    Krijger, P.H.3    van den Berk, P.C.4    Jacobs, H.5
  • 28
    • 33746093492 scopus 로고    scopus 로고
    • Cotranscriptional processes and their influence on genome stability
    • Li X., Manley JL. 2006. Cotranscriptional processes and their influence on genome stability. Genes Dev 20: 1838-1847.
    • (2006) Genes Dev , vol.20 , pp. 1838-1847
    • Li, X.1    Manley, J.L.2
  • 29
    • 33845407784 scopus 로고    scopus 로고
    • Reconstitution, activities, and structure of the eukaryotic RNA exosome
    • Liu Q., Greimann JC, Lima CD. 2006. Reconstitution, activities, and structure of the eukaryotic RNA exosome. Cell 127: 1223-1237.
    • (2006) Cell , vol.127 , pp. 1223-1237
    • Liu, Q.1    Greimann, J.C.2    Lima, C.D.3
  • 31
    • 33644636246 scopus 로고    scopus 로고
    • AID in somatic hypermutation and class switch recombination
    • Longerich S., Basu U, Alt F, Storb U. 2006. AID in somatic hypermutation and class switch recombination. Curr Opin Immunol 18: 164-174.
    • (2006) Curr Opin Immunol , vol.18 , pp. 164-174
    • Longerich, S.1    Basu, U.2    Alt, F.3    Storb, U.4
  • 32
  • 34
    • 0034268780 scopus 로고    scopus 로고
    • Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme
    • Muramatsu M., Kinoshita K, Fagarasan S, Yamada S, Shinkai Y, Honjo T. 2000. Class switch recombination and hypermutation require activation-induced cytidine deaminase (AID), a potential RNA editing enzyme. Cell 102: 553-563.
    • (2000) Cell , vol.102 , pp. 553-563
    • Muramatsu, M.1    Kinoshita, K.2    Fagarasan, S.3    Yamada, S.4    Shinkai, Y.5    Honjo, T.6
  • 36
    • 79960220935 scopus 로고    scopus 로고
    • AID targeting in antibody diversity
    • Pavri R., Nussenzweig MC. 2011. AID targeting in antibody diversity. Adv Immunol 110: 1-26.
    • (2011) Adv Immunol , vol.110 , pp. 1-26
    • Pavri, R.1    Nussenzweig, M.C.2
  • 39
  • 42
    • 33751218319 scopus 로고    scopus 로고
    • Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching
    • Revyakin A., Liu C, Ebright RH, Strick TR. 2006. Abortive initiation and productive initiation by RNA polymerase involve DNA scrunching. Science 314: 1139-1143.
    • (2006) Science , vol.314 , pp. 1139-1143
    • Revyakin, A.1    Liu, C.2    Ebright, R.H.3    Strick, T.R.4
  • 43
    • 84860353476 scopus 로고    scopus 로고
    • Different means, same endheterochromatin formation by RNAi and RNAi-independent RNA processing factors in fission yeast
    • Reyes-Turcu FE, Grewal SI. 2012. Different means, same endheterochromatin formation by RNAi and RNAi-independent RNA processing factors in fission yeast. Curr Opin Genet Dev 22: 156-163.
    • (2012) Curr Opin Genet Dev , vol.22 , pp. 156-163
    • Reyes-Turcu, F.E.1    Grewal, S.I.2
  • 44
    • 66149187105 scopus 로고    scopus 로고
    • Transcription termination by nuclear RNA polymerases
    • Richard P., Manley JL. 2009. Transcription termination by nuclear RNA polymerases. Genes Dev 23: 1247-1269.
    • (2009) Genes Dev , vol.23 , pp. 1247-1269
    • Richard, P.1    Manley, J.L.2
  • 45
    • 84861904178 scopus 로고    scopus 로고
    • Genome regulation by long noncoding RNAs
    • Rinn J.L., Chang HY. 2012. Genome regulation by long noncoding RNAs. Annu Rev Biochem 81: 145-166.
    • (2012) Annu Rev Biochem , vol.81 , pp. 145-166
    • Rinn, J.L.1    Chang, H.Y.2
  • 46
    • 67349132223 scopus 로고    scopus 로고
    • Physiological functions of the HECT family of ubiquitin ligases
    • Rotin D., Kumar S. 2009. Physiological functions of the HECT family of ubiquitin ligases. Nat Rev Mol Cell Biol 10: 398-409.
    • (2009) Nat Rev Mol Cell Biol , vol.10 , pp. 398-409
    • Rotin, D.1    Kumar, S.2
  • 50
    • 4444239054 scopus 로고    scopus 로고
    • Activation-induced cytidine deaminase (AID) can target both DNA strands when the DNA is supercoiled
    • Shen H.M., Storb U. 2004. Activation-induced cytidine deaminase (AID) can target both DNA strands when the DNA is supercoiled. Proc Natl Acad Sci 101: 12997-13002.
    • (2004) Proc Natl Acad Sci , vol.101 , pp. 12997-13002
    • Shen, H.M.1    Storb, U.2
  • 51
    • 84863331610 scopus 로고    scopus 로고
    • Inflammationmediated genomic instability: Roles of activation-induced cytidine deaminase in carcinogenesis
    • Shimizu T., Marusawa H, Endo Y, Chiba T. 2012. Inflammationmediated genomic instability: Roles of activation-induced cytidine deaminase in carcinogenesis. Cancer Sci 103: 1201-1206.
    • (2012) Cancer Sci , vol.103 , pp. 1201-1206
    • Shimizu, T.1    Marusawa, H.2    Endo, Y.3    Chiba, T.4
  • 52
    • 79955632686 scopus 로고    scopus 로고
    • Complex regulation and function of activation-induced cytidine deaminase
    • Stavnezer J. 2011. Complex regulation and function of activation-induced cytidine deaminase. Trends Immunol 32: 194-201.
    • (2011) Trends Immunol , vol.32 , pp. 194-201
    • Stavnezer, J.1
  • 53
    • 84877616305 scopus 로고    scopus 로고
    • Transcriptional stalling in B-lymphocytes: A mechanism for antibody diversification and maintenance of genomic integrity
    • Sun J., Rothschild G, Pefanis E, Basu U. 2013. Transcriptional stalling in B-lymphocytes: A mechanism for antibody diversification and maintenance of genomic integrity. Transcription 4: 127-135.
    • (2013) Transcription , vol.4 , pp. 127-135
    • Sun, J.1    Rothschild, G.2    Pefanis, E.3    Basu, U.4
  • 54
    • 77954759085 scopus 로고    scopus 로고
    • The interface between transcription and mechanisms maintaining genome integrity
    • Svejstrup JQ. 2010. The interface between transcription and mechanisms maintaining genome integrity. Trends Biochem Sci 35: 333-338.
    • (2010) Trends Biochem Sci , vol.35 , pp. 333-338
    • Svejstrup, J.Q.1
  • 55
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell C., Pachter L, Salzberg SL. 2009. TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 56
    • 9244241060 scopus 로고    scopus 로고
    • Identification of an AID-independent pathway for chromosomal translocations between the Igh switch region and Myc
    • Unniraman S., Zhou S, Schatz DG. 2004. Identification of an AID-independent pathway for chromosomal translocations between the Igh switch region and Myc. Nat Immunol 5: 1117-1123.
    • (2004) Nat Immunol , vol.5 , pp. 1117-1123
    • Unniraman, S.1    Zhou, S.2    Schatz, D.G.3
  • 57
    • 31344445404 scopus 로고    scopus 로고
    • AID-dependent histone acetylation is detected in immunoglobulin S regions
    • Wang L., Whang N, Wuerffel R, Kenter AL. 2006. AID-dependent histone acetylation is detected in immunoglobulin S regions. J Exp Med 203: 215-226.
    • (2006) J Exp Med , vol.203 , pp. 215-226
    • Wang, L.1    Whang, N.2    Wuerffel, R.3    Kenter, A.L.4
  • 61
    • 56349153585 scopus 로고    scopus 로고
    • Nedd4 augments the adaptive immune response by promoting ubiquitin-mediated degradation of Cbl-b in activated T cells
    • Yang B., Gay DL, MacLeod MK, Cao X, Hala T, Sweezer EM, Kappler J., Marrack P, Oliver PM. 2008. Nedd4 augments the adaptive immune response by promoting ubiquitin-mediated degradation of Cbl-b in activated T cells. Nat Immunol 9: 1356-1363.
    • (2008) Nat Immunol , vol.9 , pp. 1356-1363
    • Yang, B.1    Gay, D.L.2    McLeod, M.K.3    Cao, X.4    Hala, T.5    Sweezer, E.M.6    Kappler, J.7    Marrack, P.8    Oliver, P.M.9
  • 62
    • 80053144075 scopus 로고    scopus 로고
    • Zinc-finger antiviral protein inhibits HIV-1 infection by selectively targeting multiply spliced viral mRNAs for degradation
    • Zhu Y., Chen G, Lv F, Wang X, Ji X, Xu Y, Sun J, Wu L, Zheng YT, Gao G. 2011. Zinc-finger antiviral protein inhibits HIV-1 infection by selectively targeting multiply spliced viral mRNAs for degradation. Proc Natl Acad Sci 108: 15834-15839.
    • (2011) Proc Natl Acad Sci , vol.108 , pp. 15834-15839
    • Zhu, Y.1    Chen, G.2    Lv, F.3    Wang, X.4    Ji, X.5    Xu, Y.6    Sun, J.7    Wu, L.8    Zheng, Y.T.9    Gao, G.10


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