Responses to macronutrient deprivation

Abiotic Stress Adaptation in Plants: Physiological, Molecular and Genomic Foundation

Volumn , Issue , 2010, Pages 307-348

  Grossman, Arthur R ^a   Gonzalez Ballester, David ^a   Shibagaki, Nakako ^a   Pootakham, Wirulda ^a,b   Moseley, Jeffrey ^a  

^a GEOPHYSICAL LABORATORY   (United States)

^b STANFORD UNIVERSITY   (United States)

Author keywords

ammonium; assimilation; macronutrients; nitrate nutrient deprivation; phosphate; phosphorus; sulfur; transport

Indexed keywords

EID: 84879271969     PISSN: None     EISSN: None     Source Type: Book    
DOI: 10.1007/978-90-481-3112-9_15     Document Type: Chapter

References (359)

1. Allen MD, Kropat J, Tottey S, Del Campo JA, Merchant SS (2007) Manganese deficiency in Chlamydomonas results in loss of Photosystem II and MnSOD function, sensitivity to peroxides, and secondary phosphorus and iron deficiency. Plant Physiol 143:263-277
2. Alloush GAZ, Zeto SK, Clark RB (2000) Phosphorus source, organic matter and arbuscular mycorrhiza effects on growth and mineral acquisition of chickpea grown in acidic soil. J Plant Nutr 23:1351-1369
3. Amarasinghe BHRR, deBruxelles GL, Braddon M, Onye-ocha I, Forde BG, Udvardi MK (1998) Regulation of GmNRT2 expression and nitrate transport activity in roots of soybean (Glycine max). Planta 206:44-52
4. Anantharaman V, Koonin EV, Aravind L (2001) Regulatory potential, phyletic distribution and evolution of ancient, intracellular small-molecule-binding domains. J Mol Biol 307:1271-1292
5. Andreae MO, Crutzen PJ (1997) Atmospheric aerosols: bio-geochemical sources and role in atmospheric chemistry. Science 276:1052-1058
6. Andreae MO, Raemdonch H (1983) Dimethyl sulfide in the surface ocean and the marine atmosphere-a global view. Science 221:744-747
7. + reductase cDNA and its induction by nitrate. Biochem Biophys Res Commun 1183:553-556
8. Aparicio PJ, Quinones MA (1991) Blue light, a positive switch signal for nitrate and nitrite uptake by the green alga Monoraphidium braunii. Plant Physiol 95:374-378
9. Aravind L, Koonin EV (2000) The STAS domain-a link between anion transporters and antisigma-factor antagonists. Curr Biol 10:R53-55
10. Armbrust EV, Berges JA, Bowler C, Green BR, Martinez D, Putnam NH, Zhou S, Allen AE, Apt KE, Bechner M, Brzezinski MA, Chaal BK, Chiovitti A, Davis AK, Demarest MS, Detter JC, Glavina T, Goodstein D, Hadi MZ, Hellsten U, Hildebrand M, Jenkins BD, Jurka J, Kapitonov VV, Kroger N, Lau WW, Lane TW, Larimer FW, Lippmeier JC, Lucas S, Medina M, Montsant A, Obornik M, Parker MS, Palenik B, Pazour GJ, Richardson PM, Rynearson TA, Saito MA, Schwartz DC, Thamatrakoln K, Valentin K, Vardi A, Wilkerson FP, Rokhsar DS (2004) The genome of the diatom Thalas-siosira pseudonana: ecology, evolution and metabolism. Science 306:79-86
11. Arz HE, Gisselmann G, Schiffmann S, Schwenn JD (1994) A cDNA for adenylyl sulfate (APS)-kinase from Arabi-dopsis thaliana. Biochim Biophys Acta 1218:447-452
12. Atteia A, van Lis R, Gelius-Dietrich G, Adrait A, Garin J, Joyard J, Rolland N, Martin W (2006) Pyruvate for-mate-lyase and a novel route of eukaryotic ATP synthesis in Chlamydomonas mitochondria. J Biol Chem 281:9909-9918
13. Auesukaree C, Homma T, Tochio H, Shirakawa M, Kaneko Y, Harashima S (2004) Intracellular phosphate serves as a signal for the regulation of the PHO pathway in Saccharo-myces cerevisiae. J Biol Chem 279:17289-17294
14. Baek SH, Chung IM, Yun SJ (2001) Molecular cloning and characterization of a tobacco leaf cDNA encoding a phosphate transporter. Mol Cells 11:1-6
15. Barabote RD, Tamang DG, Abeywardena SN, Fallah NS, Fu JY, Lio JK, Mirhosseini P, Pezeshk R, Podell S, Salam-pessy ML, Thever MD, Saier MH Jr (2006) Extra domains in secondary transport carriers and channel proteins. Bio-chim Biophys Acta 1758:1557-1579
16. Bari R, Datt Pant B, Stitt M, Scheible WR (2006) PHO2, microRNA399 and PHR1 define a phosphate-signaling pathway in plants. Plant Physiol 141:988-999
17. Bariola PA, Howard CJ, Taylor CB, Verburg MT, Jaglan VD, Green PJ (1994) The Arabidopsis ribonuclease gene RNS1 is tightly controlled in response to phosphate limitation. Plant J 6:673-685
18. Benemann JR, Berenson JA, Kaplan NO, Kamen MD (1973) Hydrogen evolution by a chloroplast-ferredoxin-hydroge-nase system. Proc Natl Acad Sci USA 70:2317-2320
19. Bick JA, Aslund F, Chen Y, Leustek T (1998) Glutaredoxin function for the carboxyl terminal domain of the plant-type 5¢-adenylylsulfate (APS) reductase. Proc Natl Acad Sci USA 95:8404-8409
20. Bieleski RL (1973) Phosphate pools, phosphate transport, and phosphorus availability. Annu Rev Plant Physiol Plant Mol Biol 24:225-252
21. Bieleski RL, Laluchli A (1992) Phosphate uptake, efflux and deficiency in the water fern, Azolla. Plant Cell Environ 15:665-673
22. Bogdanova N, Hell R (1997) Cysteine synthesis in plants: protein-protein interactions of serine acetyltransferase from Arabidopsis thaliana. Plant J 11:251-262
23. Bolchi A, Petrucco S, Tenca P, Foroni C, Ottonello S (1999) Coordinate modulation of maize sulfate permease and ATP sulfurylase mRNAs in response to variations in sulfur nutritional status: stereospecific down-regulation by L-cysteine. Plant Mol Biol 39:527-537
24. Bork C, Schwenn JD, Hell R (1998) Isolation and characterization of a gene for assimilatory sulfite reductase from Arabidopsis thaliana. Gene 212:147-153
25. Boudsocq M, Droillard MJ, Barbier-Brygoo H, Lauriere C (2007) Different phosphorylation mechanisms are involved in the activation of sucrose non-fermenting 1 related protein kinases 2 by osmotic stresses and abscisic acid. Plant Mol Biol 63:491-503
26. Briggs WR, Huala E (1999) Blue-light photoreceptors in higher plants. Annu Rev Cell Dev Biol 15:33-62
27. Bruhl A, Haverkamp T, Gisselmann G, Schwenn JD (1996) A cDNA clone from Arabidopsis thaliana encoding plas-tidic ferredoxin: sulfite reductase. Biochim Biophys Acta 1295:119-124
28. 2S and pedospheric sulfate nutrition. Plant Physiol 136: 3396-3408
29. Campbell WH, Kinghorn JR (1990) Functional domains of assimilatory nitrate reductases and nitrite reductases. Trends Biochem Sci 15:315-319
30. Chang CW, Moseley JL, Wykoff D, Grossman AR (2005) The LPB1 gene is important for acclimation of Chlamydomonas reinhardtii to phosphorus and sulfur deprivation. Plant Physiol 138:319-329
31. Charlson RJ, Lovelock JE, Andreae MO, Warren SG (1987) Oceanic phytoplankton, atmospheric sulphur, cloud albedo and climate. Nature 326:655-661
32. Chen HC, Melis A (2004) Localization and function of SulP, a nuclear-encoded chloroplast sulfate permease in Chlamydomonas reinhardtii. Planta 220:198-210
33. Chen Q, Silflow CD (1996) Isolation and characterization of glutamine synthetase genes in Chlamydomonas rein-hardtii. Plant Physiol 112:987-996
34. Chen HC, Yokthongwattana K, Newton AJ, Melis A (2003) SulP, a nuclear gene encoding a putative chloroplast-targeted sulfate permease in Chlamydomonas reinhardtii. Planta 218:98-106
35. Chen HC, Newton AJ, Melis A (2005) Role of SulP, a nuclear-encoded chloroplast sulfate permease, in sulfate transport and H2 evolution in Chlamydomonas rein-hardtii. Photosynth Res 84:289-296
36. Chernova MN, Jiang L, Shmukler BE, Schweinfest CW, Blanco P, Freedman SD, Stewart AK, Alper SL (2003) Acute regulation of the SLC26A3 congenital chloride diarrhoea anion exchanger (DRA) expressed in Xenopus oocytes. J Physiol 549:3-19
37. Chiba Y, Ishikawa M, Kijima F, Tyson RH, Kim JH, Yamamoto A, Nambara E, Leustek T, Wallsgrove RM, Naito S (1999) Evidence for autoregulation of cystathio-nine g-synthase mRNA stability in Arabidopsis. Science 286:1371-1374
38. Chiou TJ, Aung K, Lin SI, Wu CC, Chiang SF, Cl Su (2006) Regulation of phosphate homeostasis by microRNA in Arabidopsis. Plant Cell 18:412-421
39. Christie JM, Swartz TE, Bogomolni RA, Briggs WR (2002) Phototropin LOV domains exhibit distinct roles in regulating photoreceptor function. Plant J 32:205-219
40. Cole DW, Johnson DW (1977) Atmospheric sulfate additions and cation leaching in a Douglas fir ecosystem. Water Resources Res 13:313-317
41. Croft MT, Lawrence AD, Raux-Deery E, Warren MJ, Smith AG (2005) Algae acquire vitamin B12 through a symbiotic relationship with bacteria. Nature 438:90-93
42. Croft MT, Warren MJ, Smith AG (2006) Riboswitch regulated gene expression in Chlamydomonas reinhardtii is involved in symbiotic interactions with bacteria. In: 12th International Conference on the Cell and Molecular Biology of Chlamydomonas, Portland, OR
43. Crosson S, Rajagopal S, Moffat K (2003) The LOV domain family: photoresponsive signaling modules coupled to diverse output domains. Biochemistry 42:2-10
44. Curien G, Job D, Douce R, Dumas R (1998) Allosteric activation of Arabidopsis threonine synthase by S-adenosyl-methionine. Biochemistry 37:13212-13221
45. David MB, Grigal DF, Ohmann LF, Gertner GZ (1988) Sulfur, carbon, and nitrogen relationships in forest soils across the northern Great Lakes States as affected by atmospheric deposition and vegetation. Can J Forest Res 18:1386-1391
46. Davies J, Yildiz F, Grossman AR (1996) Sac1, a putative regulator that is critical for survival of Chlamydomonas rein-hardtii during sulfur deprivation. EMBO J 15:2150-2159
47. Davies JD, Grossman AR (1998) Responses to deficiencies in macronutrients. In: Rochaix JD, Goldschmidt-Clermont M, Merchant S (eds) The Molecular Biology of Chlamydomonas. Kluwer, Dortrecht, pp 613-635
48. Davies JP, Yildiz F, Grossman AR (1994) Mutants of Chlamydomonas reinhardtii with aberrant responses to sulfur deprivation. Plant Cell 6:53-63
49. Davies JP, Yildiz FH, Grossman AR (1999) Sac3, an Snf1-like serine/threonine kinase that positively and negatively regulates the responses of Chlamydomonas to sulfur limitation. Plant Cell 11:1179-1190
50. de Hostos EL, Togasaki RK, Grossman AR (1988) Purification and biosynthesis of a derepressible periplasmic arylsulfatase from Chlamydomonas reinhardtii. J Cell Biol 106:29-37
51. de Hostos EL, Schilling J, Grossman AR (1989) Structure and expression of the gene encoding the periplasmic aryl-sulfatase of Chlamydomonas reinhardtii. Mol Gen Genet 218:229-239
52. Delhaize E, Randall PJ (1995) Characterization of a phosphate-accumulator mutant of Arabidopsis thaliana. Plant Physiol 107:207-213
53. Dong B, Rengel Z, Delhaize E (1998) Uptake and transloca-tion of phosphate by pho2 mutant and wild-type seedlings of Arabidopsis thaliana. Planta 205:251-256
54. Drew MC, Saker LR, Barber SA, Jenkins W (1984) Changes in the kinetics of phosphate and potassium absorption in nutrient-deficient barley roots measured by a solution-depletion technique. Planta 160:490-499
55. Droux M, Ravanel S, Douce R (1995) Methionine biosynthesis in higher plants-purification and characterization of cystathionine b-lyase from spinach chloroplasts. Arch Biochem Biophys 316:585-595
56. Droux M, Ruffet ML, Douce R, Job D (1998) Interactions between serine acetyltranferase and O-acetylserine(thiol) lyase in higher plants. Eur J Biochem 255:235-245
57. Duff SMG, Lefebvre DD, Plaxton WC (1991) Purification, characterization and sub-cellular localization of an acid phosphatase from Brassica nigra suspension cells-Comparison with phosphoenolpyruvate phosphatase. Arch Biochem Biophys 286:226-232
58. Dumont F, Loppes R, Kremers P (1990) New polypeptides and in-vitro translatable mRNAs are produced by phosphate-starved cells of the unicellular alga Chlamydomonas reinhardtii. Planta 182:610-616
59. Duncan L, Alper S, Losick R (1996) SpoIIAA governs the release of the cell-type specific transcription factor sigma F from its anti-sigma factor SpoIIAB. J Mol Biol 260:147-164
60. Eberhard S, Jain M, Im CS, Pollock S, Shrager J, Lin Y, Peek AS, Grossman AR (2006) Generation of an oli-gonucleotide array for analysis of gene expression in Chlamydomonas reinhardtii. Curr Genet 49:106-124
61. Ermilova EV, Zalutskaya ZM, Huang K, Beck CF (2004) Phototropin plays a crucial role in controlling changes in chemotaxis during the initial phase of the sexual life cycle in Chlamydomonas. Planta 219:420-427
62. Everett LA, Green ED (1999) A family of mammalian anion transporters and their involvement in human genetic diseases. Hum Mol Genet 8:1883-1891
63. Everett LA, Glaser B, Beck JC, Idol JR, Buchs A, Heyman M, Adawi F, Hazani E, Nassir E, Baxevanis AD, Sheffield VC, Green ED (1997) Pendred syndrome is caused by mutations in a putative sulphate transporter gene (PDS). Nat Genet 17:411-422
64. Fernández E, Cardenas J (1989) Genetic and regulatory aspects of nitrate assimilation in algae. Oxford University Press, Oxford, pp 101-124
65. Fernández E, Galvan A (2007) Inorganic nitrogen assimilation in Chlamydomonas. J Exp Bot 58:2279-2287
66. Fernández E, Franco AR, Córdoba F, Cárdenas J (1986) Regulation of nitrate reductase levels in Chlamydomonas reinhardtii. Cienc Biol (Coimbra) 11:171-174
67. Fernández E, Schnell R, Ranum LPW, Hussey SC, Sil-flow CD, Lefebvre PA (1989) Isolation and characterization of the nitrate reductase structural gene of Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 86:6449-6453
68. Fernández E, Galvan A, Quesada A (1998) Nitrogen assimilation and its regulation. In: Rochaix JD, Goldschmidt-Clermont M, Merchant SS (eds) Molecular biology of Chlamydomonas: chloroplast and mitochondria, pp 637-659
69. Ferreira RMB, Teixeira ARN (1992) Sulfur starvation in Lemna leads to degradation of ribulose-bisphosphate carboxylase without plant death. J Biol Chem 267: 7253-7257
70. Filleur S, Daniel-Vedele F (1999) Expression analysis of a high-affinity nitrate transporter isolated from Arabidopsis thaliana by differential display. Planta 207:461-469
71. Fischer WN, Kwart M, Hummel S, Frommer WB (1995) Substrate specificity and expression profile of amino-acid transporters (AAPS) in Arabidopsis. J Biol Chem 270:16315-16320
72. Fischer WN, Andre B, Rentsch D, Krollkiewicz S, Tegeder M, Breitkreuz K, Frommer WB (1998) Amino acid transport in plants. Trends Plant Sci 3:188-195
73. Forde BG (2000) Nitrate transporters in plants: structure, function and regulation. Biochem Biophys Res Commun 1465:219-235
74. Forestier M, King P, Zhang L, Posewitz M, Schwarzer S, Happe T, Ghirardi ML, Seibert M (2003) Expression of two [Fe]-hydrogenases in Chlamydomonas rein-hardtii under anaerobic conditions. Eur J Biochem 270: 2750-2758
75. Fouchard S, Hemschemeier A, Caruana A, Pruvost J, Legrand J, Happe T, Peltier G, Cournac L (2005) Autotrophic and mixotrophic hydrogen photoproduction in sulfur-deprived chlamydomonas cells. Appl Environ Microbiol 71:6199-6205
76. Foyer CH, Fletcher JM (2001) Plant antioxidants: colour me healthy. Biologist (London) 48:115-120
77. Foyer CH, Halliwell B (1976) The presence of glutathione and glutathione reductase in chloroplasts: a proposed role in ascorbic acid metabolism. Planta 133:21-25
78. Franco AR, Cardenas J, Fernandez E (1987) Involvement of reversible inactivation in the regulation of nitrate reduct-ase enzyme levels in Chlamydomonas reinhardtii. Plant Physiol 84:665-669
79. Franco AR, Cardenas J, Fernandez E (1988) Regulation by ammonium of nitrate and nitrite assimilation in Chlamydomonas reinhardtii. Biochem Biophys Res Com-mun 951:98-103
80. +-coupled phosphate transport catalyzed by the Saccharomyces cerevisiae Pho84 permease in coreconstituted vesicles. Biochemistry 38:16010-16015
81. Fujii H, Chiou TJ, Lin SI, Aung K, Zhu JK (2005) A miRNA involved in phosphate-starvation response in Arabidopsis. Curr Biol 15:2038-2043
82. Fujii H, Verslues PE, Zhu JK (2007) Identification of two protein kinases required for abscisic acid regulation of seed germination, root growth and gene expression in Arabidopsis. Plant Cell 19:485-494
83. Galván A, Marquez AJ, Vega JM (1984) Purification and molecular properties of ferredoxin-glutamate synthase from Chlamyomonas reinhardtii. Planta 162:180-187
84. Galván A, Quesada A, Fernandez E (1996) Nitrate and nitrite are transported by different specific transport systems and by a bispecific transporter in Chlamydomonas reinhardtii. J Biol Chem 271:2088-2092
85. Ghirardi ML, Posewitz MC, Maness PC, Dubini A, Yu J, Seibert M (2007) Hydrogenases and hydrogen photopro-duction in oxygenic photosynthetic organisms. Annu Rev Plant Biol 58:71-91
86. Gilbert GA, Knight JD, Vance CP, Allen DL (1999) Acid phosphatase activity in phosphorous-deficient white lupin roots. Plant Cell Environ 22:801-810
87. Gojon A, Dapoigny L, Lejay L, Tillard P, Rufty TW (1998) Effects of genetic modification of nitrate reductase expression on (no3)-N-15 uptake and reduction in Nicotiana plants. Plant Cell Environ 21:43-53
88. Goldstein AH, Baertlein DA, Danon A (1989) Phosphate starvation stress as an experimental system for molecular analysis. Plant Mol Biol Rep 7:7-16
89. Gomez-Garcia MR, Kornberg A (2004) Formation of an actin-like filament concurrent with the enzymatic synthesis of inorganic polyphosphate. Proc Natl Acad Sci USA 101:15876-15880
90. Gonzalez-Ballester D, Grossman AR (2009) Sulfur: from aquisition to assimilation. In: Stern D, Harris EH, Witman GB (eds) The Chlamydomonas Sourcebook. Academic Press, Amsterdam, pp 159-187
91. Gonzalez-Ballester D, Camargo A, Fernandez E (2004) Ammonium transporter genes in Chlamydomonas: the nitrate-specific regulatory gene Nit2 is involved in Amt1; 1 expression. Plant Mol Biol 56:863-878
92. Gonzalez-Ballester D, de Montaigu A, Higuera JJ, Galvan A, Fernandez E (2005) Functional genomics of the regulation of the nitrate assimilation pathway in Chlamydomonas. Plant Physiol 137:522-533
93. Gonzalez-Ballester D, Pollock P, Pootakham W, Grossman AR (2008) The central role of a SNRK2 kinase in sulfur deprivation responses. Plant Physiol 147:216-227
94. Goodenough U, Lin H, Lee JH (2007) Sex determination in Chlamydomonas. Semin Cell Dev Biol 18:350-361
95. Gotor C, Cejudo FJ, Barroso C (1997) Tissue-specific expression of AtCys-3A gene encoding the cytosolic isoform of O-acetylserine(thiol)lyase in Arabidopsis. Plant J 11:347-352
96. Green PJ (1994) The ribonucleases of higher plants. Ann Rev Plant Physiol Plant Mol Biol 45:421-445
97. Grill E, Loffler S, Winnacker EL, Zenk MH (1989) Phyto-chelatins, the heavy-metal-binding peptides of plants, are synthesized from glutathione by a specific g-glutamyl-cysteine dipeptidyl transpeptidase (phytochelatin syn-thetase). Proc Natl Acad Sci USA 86:6838-6842
98. Grossman A, Takahashi H (2001) Macronutrient utilization by photosynthetic eukaryotes and the fabric of interactions. Annu Rev Plant Physiol Plant Mol Biol 52: 163-210
99. Grossman AR, Croft M, Gladyshev VN, Merchant SS, Pose-witz MC, Prochnik S, Spalding MH (2007) Novel metabolism in Chlamydomonas through the lens of genomics. Curr Opin Plant Biol 10:190-198
100. Guerrero MG, Vega JM, Losada M (1981) The assimila-tory nitrate reducing system and its regulation. Annu Rev Plant Physiol 32:169-204
101. Guiz C, Hirel B, Shedlofsky G, Gadal P (1979) Occurence and influence of light on the relative proportions of 2 glutamine synthetases in rice leaves. Plant Sci 15: 271-277
102. Gupta AS, Alscher RG, McCune DF (1990) Ozone exposure, glutathione levels and photosynthesis in hybrid poplar. In: H Rennenberg, C Brunold, LJ Dekoli, I Stulen (eds) Sulfur nutrition and sulfur assimilation in higher plants. SPB Academic Publications. the Hague, the Netherlands, pp 195-197
103. Gutierrez-Marcos J, Roberts M, Campbell E, Wray J (1996) Three members of a novel small gene-family from Ara-bidopsis thaliana able to complemet functionally an Escherichia coli mutant defective in PAPS reductase activity encode proteins with a thioredoxin-like domain and "APS reductase" activity. Proc Natl Acad Sci USA 93:13377-13382
104. Habicht KS, Gade M, Thamdrup B, Berg P, Canfield DE (2002) Calibration of sulfate levels in the archaean oceans. Science 298:2372-2374
105. Hallmann A (1999) Enzymes in the extracellular matrix of Volvox: an inducible, calcium-dependent phos-phatase with a modular composition. J Biol Chem 274: 1691-1697
106. Hanikenne M, Kramer U, Demoulin V, Baurain D (2005) A comparative inventory of metal transporters in the green alga Chlamydomonas reinhardtii and the red alga Cya-nidioschizon merolae. Plant Physiol 137:428-446
107. Hartmann T, Honicke P, Wirtz M, Hell R, Rennenberg H, Kopriva S (2004) Regulation of sulphate assimilation by glutathione in poplars (Populus tremula x P. alba) of wild type and overexpressing gamma-glutamylcysteine syn-thetase in the cytosol. J Exp Bot 55:837-845
108. Hatzfeld Y, Lee S, Lee M, Leustek T, Saito K (2000) Functional characterization of a gene encoding a fourth ATP sulfurylase isoform from Arabidopsis thaliana. Gene 248:51-58
109. Hebeler M, Hentrich S, Mayer A, Leibfritz D, Grimme LH (1992) Phosphate regulation and compartmentation in Chlamydomonas reinhardtii studied by in vivo 31P-NMR. In: Murat N (ed). Research in Photosynthesis. Kluwer, the Netherlands, pp 717-720
110. Herschbach C, Rennenberg H (1994) Influence of glutath-ione (GSH) on net uptake of sulfate and sulfate transport in tobacco plants. J Exp Bot 45:1069-1076
111. Hesse H, Lipke J, Altmann T, Hofgen R (1999) Molecular cloning and expression analysis of mitochondrial and plas-tidic isoforms of cysteine synthase [O-acetylserine(thio) lyase] from Arabidopsis thaliana. Amino Acids 16: 113-131
112. Hirner A, Ladwig F, Stransky H, Okumoto S, Keinath M, Harms A, Frommer WB, Koch W (2006) Arabidopsis LHT1 is a high-affinity transporter for cellular amino acid uptake in both root epidermis and leaf mesophyll. Plant Cell 18:1931-1946
113. Ho MS, Carniol K, Losick R (2003) Evidence in support of a docking model for the release of the transcription factor sigma F from the antisigma factor SpoIIAB in Bacillus subtilis. J Biol Chem 278:20898-20905
114. Howarth JR, Fourcroy P, Davidian JC, Smith FW, Hawkes-ford MJ (2003) Cloning of two contrasting high-affinity sulfate transporters from tomato induced by low sulfate and infection by the vascular pathogen Verticillium dahl-iae. Planta 218:58-64
115. Huang K, Beck CF (2003) Phototropin is the blue-light receptor that controls multiple steps in the sexual life cycle of the green alga Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 100:6269-6274
116. Im CS, Eberhard S, Huang K, Beck C, Grossman AR (2006) Phototropin involvement in expression of genes encoding chlorophyll and carotenoid biosynthesis enzymes and LHC apoproteins in Chlamydomonas reinhardtii. Plant J 48:1-16
117. Irihimovitch V, Stern DB (2006) The sulfur acclimation SAC3 kinase is required for chloroplast transcriptional repression under sulfur limitation in Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 103:7911-7916
118. Jensen LT, Ajua-Alemanji M, Culotta VC (2003) The Sac-charomyces cerevisiae high affinity phosphate transporter encoded by PHO84 also functions in manganese homeos-tasis. J Biol Chem 278:42036-42040
119. Jin T, Huppe HC, Turpin DH (1998) In vitro reconstitu-tion of electron transport from glucose-6-phosphate and NADPH to nitrite. Plant Physiol 117:303-309
120. Johnson DW, Turner J, Kelly JM (1982) The effects of acid rain on forest nutrient status. Water Res 18:449-461
121. Jones KM, Kobayashi H, Davies BW, Taga ME, Walker GC (2007) How rhizobial symbionts invade plants: the Sinorhizobium-Medicago model. Nat Rev Microbiol 5:619-633
122. Jost W, Bak H, Blund K, Terpstra P, Beintema JJ (1991) Amino acid sequence of an extracellular, phosphate-starvation-induced ribonuclease from cultured tomato (Lyco-persicon esculentum) cells. Eur J Biochem 198:1-6
123. Juma NG, Tabatabai MA (1988) Comparison of kinetic and thermodynamic parameters of phosphomonoesterases of soils and corn and soybean roots. Soil Biol Biochem 20:533-540
124. Jungk A, Asher CJ, Edwards DG, Meyers D (1990) Influence of phosphate status on phosphate uptake kinetics of maize (Zea mays) and soybean (Glycine max). Plant Soil 124:175-182
125. Kagawa T, Wada M (2002) Blue light-induced chloroplast relocation. Plant Cell Physiol 43:367-371
126. Kagawa T, Sakai T, Suetsugu N, Oikawa K, Ishiguro S, Kato T, Tabata S, Okada K, Wada M (2001) Arabidopsis NPL1: a phototropin homolog controlling the chloroplast highlight avoidance response. Science 291:2138-2141
127. Kamiya A (1988) Blue light-induced in vivo absorbance changes and in vitro activation of nitrate reductase in nitrate-starved Chlorella mutant. Plant Cell Physiol 29:489-496
128. Karandashov V, Bucher M (2005) Symbiotic phosphate transport in arbuscular mycorrhizas. Trends Plant Sci 10:22-29
129. Kataoka T, Hayashi N, Yamaya T, Takahashi H (2004a) Root-to-shoot transport of sulfate in Arabidopsis-Evidence for the role of SULTR3;5 as a component of low-affinity sulfate transport system in the root vasculature. Plant Physiol 136:4198-4204
130. Kataoka T, Watanabe-Takahashi A, Hayashi N, Ohnishi M, Mimura T, Buchner P, Hawkesford MJ, Yamaya T, Taka-hashi H (2004b) Vacuolar sulfate transporters are essential determinants controlling internal distribution of sulfate in Arabidopsis. Plant Cell 16:2693-2704
131. Kawashima CG, Berkowitz O, Hell R, Noji M, Saito K (2005) Characterization and expression analysis of a ser-ine acetyltransferase gene family involved in a key step of the sulfur assimilation pathway in Arabidopsis. Plant Physiol 137:220-230
132. Kieber DJ, Jiao J, Kiene RP, Bates TS (1996) Impact of dimethylsulfide photochemistry on methyl sulfur cycling in the equatorial Pacific Ocean. J Geophys Res 101: 3715-3722
133. Kim H, Hirai MY, Hayashi H, Chino M, Naito S, Fujiwara T (1999) Role of O-acetyl-L-serine in the coordinated regulation of the expression of a soybean seed storage-protein gene by sulfur and nitrogen nutrition. Planta 209:282-289
134. Kinoshita T, Emi T, Tominaga M, Sakamoto K, Shigenaga A, Doi M, Shimazaki K (2003) Blue-light-and phos-phorylation-dependent binding of a 14-3-3 protein to phototropins in stomatal guard cells of broad bean. Plant Physiol 133:1453-1463
135. Kirk DL, Kirk MM (1978) Carrier-mediated uptake of arginine and urea by Chlamydomonas reinhardtii. Plant Physiol 61:556-560
136. Klonus D, Höfgen R, Willmitzer L, Riesmeier J (1994) Isolation and characterization of two cDNA clones encoding ATP-sulfurylases from potato by complementation of a yeast mutant. Plant J 6:105-112
137. - transport in cystic fibrosis. EMBO J 21:5662-5672
138. Kobayashi I, Fujiwara S, Shimogawara K, Kaise T, Usuda H, Tsuzuki M (2003) Insertional mutagenesis in a homo-logue of a Pi transporter gene confers arsenate resistance on Chlamydomonas. Plant Cell Physiol 44:597-606
139. Koh S, Wiles AM, Sharp JS, Naider FR, Becker JM, Stacey G (2002) An oligopeptide transporter gene family in Ara-bidopsis. Plant Physiol 128:21-29
140. Komelli A, O'Shea EK (1999) Roles of phophorylation sites in regulatin activity of the transcription factor Pho4. Science 284:977-980
141. Kopriva S (2006) Regulation of sulfate assimilation in Ara-bidopsis and beyond. Ann Bot (Lond) 97:479-495
142. Koprivova A, Suter M, den Camp RO, Brunhold C, Kopriva S (2000) Regulation of sulfate assimilation by nitrogen in Arabidopsis. Plant Physiol 122:737-746
143. + uptake systems TrkH and TrkI from Halomonas elongata DSM 2581T. J Bacteriol 187:1036-1043
144. Kredich N (1992) The molecular basis for posititive regulation of cys promoters in Salmonela typhimurium and Escherichia coli. Mol Microbiol 6:2747-2753
145. Kudla J, Hayes R, Gruissem W (1996) Polyadenylation accelerates degradation of chloroplast mRNA. EMBO J 15:7137-7146
146. Kugita M, Kaneko A, Yamamoto Y, Takeya Y, Matsumoto T, Yoshinaga K (2003) The complete nucleotide sequence of the hornwort (Anthoceros formosae) chloroplast genome: insight into the earliest land plants. Nucleic Acids Res 31:716-721
147. Kunert KJ, Foyer C (1993) Thiol/disulfide exchange in plants. In: de Kik LJ, Stulen I, Rennenberg H, Brunold C, Rauser WE (eds) Sulfur nutrition and sulfur assimilation in higher plants. SPB Academic, the Hague, the Netherlands, pp 139-151
148. 2 channels. Transfus Clin Biol 13:103-110
149. Lam HM, Coschigano KT, Oliveira IC, Melo-Oliveira R, Coruzzi GM (1996) The molecular genetics of nitrogen assimilation into amino acids in higher plants. Annu Rev Plant Physiol 47:569-593
150. - uptake in intact canola: the role of phloem-translocated glutathione. Plant Physiol 111:147-157
151. Lappartient AG, Vidmar JJ, Leustek T, Glass ADM, Tou-raine B (1999) Inter-organ signaling in plants: regulation of ATP sulfurylase and sulfate transporter genes expression in roots mediated by phloem-translocated compound. Plant J 18:89-95
152. Law MY, Charles SA, Halliwell B (1983) Glutathione and ascorbic acid in spinach (Spinacia oleracea) chloroplasts: the effect of hydrogen peroxide and of paraquat. Biochem J 210:899-903
153. Lea PJ, Robinson SA, Stewart GR (1990) The enzymology and metabolism of glutamine, glutamate, and asparagine. In: Miflin BJ, Lea PJ (eds) The biochemistry of plants: a comprehensive treatise. Academic Press, New York, pp 121-160
154. Lee RB (1988) Phosphatase influx and extracellular phos-phatase activity in barley roots and rose cells. New Phytol 109:141-148
155. Lee S, Leustek T (1998) APS kinase from Arabidopsis thal-iana: genomic organization, expression and kinetic analysis of the recombinant enzyme. Biochem Biophys Res Commun 247:171-175
156. Lee S, Leustek T (1999) The effect of cadmium on sul-fate assimilation enzymes in Brassica juncea. Plant Sci 141:201-207
157. Lefebvre DD, Clarkson DT (1984) Characterization of orthophosphate absorption by pea root protoplasts. J Exp Bot 35:1265-1276
158. Lefebvre DD, Duff SMG, Fife CA, Julien-Inalsingh C, Plaxton WC (1990) Response to phosphate deprivation in Brassica nigra suspension cells: enhancement of intra-cellular, cell surface and secreted phosphatase activities compared to increases in Pi-absorption rate. Plant Physiol 93:504-511
159. Leitao JM, Lorenz B, Bachinski N, Wilhelm C, Muller WEG, Schroder HC (1995) Osmotic-stress-induced synthesis and degradation of inorganic polyphosphates in the alga Phaeodactylum tricornutum. Mar Ecol Prog Ser 121:279-288
160. - uptake systems by N-and C-status of Arabidopsis plants. Plant J 18:509-519
161. Lemieux C, Otis C, Turmel M (2000) Ancestral chloroplast genome in Mesostigma viride reveals an early branch of green plant evolution. Nature 403:649-652
162. Leustek T, Saito K (1999) Sulfate transport and assimilation in plants. Plant Physiol 120:637-643
163. Leustek T, Murillo M, Cervantes M (1994) Cloning of a cDNA encoding ATP sulfurylase from Arabidopsis thal-iana by functional expression in Saccharomyces cerevi-siae. Plant Physiol 105:897-902
164. Li D, Zhu H, Liu K, Liu X, Leggewie G, Udvardi M, Wang D (2002) Purple acid phosphatases of Arabidopsis thal-iana-Comparative analysis and differential regulation by phosphate deprivation. J Biol Chem 277:27772-27781
165. Lien T, Knutsen G (1973) Phosphate as a control factor in cell division of Chlamydomonas reinhardti, studies in synchronous culture. Exptl Cell Res 78:79-88
166. Lin H, Goodenough UW (2007) Gametogenesis in the Chlamydomonas reinhardtii minus mating type is controlled by two genes, MID and MTD1. Genetics 176: 913-925
167. Lipsick JS (1996) One billion year of Myb. Oncogene 13:223-235
168. Lisitsky I, Kotler A, Schuster G (1997) The mechanism of preferential degradation of polyadenylated RNA in the chloroplast-The exoribonuclease 100RNP/polynucle-otide phosphorylase displays high binding affinity for poly(A) sequence. J Biol Chem 272:17648-17653
169. Liu KH, Tsay YF (2003) Switching between the two action modes of the dual-affinity nitrate transporter CHL1 by phosphorylation. EMBO J 22:1005-1013
170. Logan HM, Cathala N, Grignon C, Davidian JC (1996) Cloning of a cDNA encoded by a member of the Arabidopsis thaliana ATP sulfuylase multigene family: Expression studies in yeast and in relation to plant sulfur nutrition. J Biol Chem 271:12227-12233
171. Lomans BP, van der Drift C, Pol A, Op den Camp HJ (2002) Microbial cycling of volatile organic sulfur compounds. Cell Mol Life Sci 59:575-588
172. Loppes R (1976a) Genes involved in the regulation of the neutral phosphatase in Chlamydomonas reinhardi. Mol Gen Genet 148:315-321
173. Loppes R (1976b) Release of enzymes by normal and wall-free cells of Chlamydomonas. J Bacteriol 128:114-116
174. Loppes R, Deltour R (1981) A pleiotropic mutant of Chlamydomonas reinhardi showing cell wall abnormalities and altered phosphatase activities. Plant Sci Lett 21:193-197
175. Loppes R, Matagne RF (1973) Acid phosphatase mutants in Chlamydomonas: isolation and characterization by biochemical, electrophoretic and genetic analysis. Genetics 75:593-604
176. Loppes R, Braipson J, Matagne RF, Sassen A, Ledoux L (1977) Regulation of the neutral phosphatase in Chlamydomonas reinhardi: an immunogenetic study of wild-type and mutant strains. Biochem Genet 15: 1147-1157
177. Lovelock JE (1972) Gaia as seen through the atmosphere. Atmos Environ 6:579-580
178. Lunn JE, Droux M, Martin J, Douce R (1990) Localization of ATP sulfurylase and O-acetyl(thiol)lyase in spinach leaves. Plant Physiol 94:1345-1352
179. MacDonald NW, Burton AJ, Jurgensen MF, McLaughlin JW, Mroz GD (1991) Variation in forest soil properties along a Great Lakes air pollution gradient. Soil Sci Soc Am J 55:1709-1715
180. Mahler RJ, Maples RL (1986) Responses of wheat to sulfur fertilization. Commun Soil Sci Plant Anal 17: 975-988
181. Mahler RJ, Maples RL (1987) Effect of sulfur additions on soil and the nutrition of wheat. Commun Soil Sci Plant Anal 18:653-673
182. Mann AF, Fentem PA, Stewart GR (1979) Identification of 2 forms of glutamine synthetase in barley (Hordeum vul-gares). Biochem Biophys Res Commun 88:515-521
183. Mariscal V, Moulin P, Orsel M, Miller AJ, Fernandez E, Galvan A (2006) Differential regulation of the Chlamydomonas Nar1 gene family by carbon and nitrogen. Protist 157:421-433
184. Marquez AG, Galvan F, Vega JM (1984) Purification and characterization of the NADH-glutamate synthase from Chlamydomonas reinhardtii. Plant Sci 34:305-314
185. Marrs KA (1996) The functions and regulation of glutath-ione S-transferases in plants. Annu Rev Plant Physiol 47:127-158
186. Marschner H (1995) Mineral nutrition of higher plants, 2nd edn. Academic Press, London
187. Maruyama-Nakashita A, Nakamura Y, Tohge T, Saito K, Takahashi H (2006) Arabidopsis SLIM1 is a central tran-scriptional regulator of plant sulfur response and metabolism. Plant Cell 18:3235-3251
188. Matagne RF, Loppes R (1975) Isolation and study of mutants lacking a derepressible phosphatase in Chlamydomonas reinhardi. Genetics 80:239-250
189. Matagne RF, Loppes R, Deltour R (1976) Phosphatases of Chlamydomonas reinhardi: Biochemical and cytochemi-cal approach with specific mutants. J Bacteriol 126:937-950
190. Matsumura T, Sakakibara H, Nakano R, Kimata Y, Sugiyama T, Hase T (1997) A nitrate-inducible ferredoxin in maize roots-genomic organization and differential expression of two non-photosynthetic ferredoxin isoproteins. Plant Physiol 114:653-660
191. May MJ, Leaver CJ (1994) Arabidopsis thaliana Y-glutamyl-cysteine synthase is structurally unrelated to mammalian, yeast and Escherichia coli homologs. Proc Natl Acad Sci USA 91:10059-10063
192. McInerney P, Mizutani T, Shiba T (2006) Inorganic polyphos-phate interacts with ribosomes and promotes translation fidelity in vitro and in vivo. Mol Microbiol 60:438-447
193. McPharlin IR, Bieleski RL (1987) Phosphate uptake by Spirodela and Lemna during early phosphorus deficiency. Aust J Plant Physiol 14:561-572
194. Meister A (1994) Glutathione-ascorbic acid antioxidant system in animals. J Biol Chem 269:9397-9400
195. Meister A, Anderson ME (1983) Glutathione. Annu Rev Biochem 52:711-760
196. 2 metabolism in Chlamydomonas reinhardtii (unicellular green algae). Planta 226:1075-1086
197. Melis A, Chen HC (2005) Chloroplast sulfate transport in green algae-genes, proteins and effects. Photosynth Res 86:299-307
198. Merchan F, van den Ende H, Fernandez E, Beck CF (2001) Low-expression genes induced by nitrogen starvation and subsequent sexual differentiation in Chlamydomonas reinhardtii, isolated by the differential display technique. Planta 213:309-317
199. Merchant SS, Prochnik SE, Vallon O, Harris EH, Karpowicz SJ, Witman GB, Terry A, Salamov A, Fritz-Laylin LK, Marechal-Drouard L, Marshall WF, Qu LH, Nelson DR, Sanderfoot AA, Spalding MH, Kapitonov VV, Ren Q, Ferris P, Lindquist E, Shapiro H, Lucas SM, Grimwood J, Schmutz J, Cardol P, Cerutti H, Chanfreau G, Chen CL, Cognat V, Croft MT, Dent R, Dutcher S, Fernandez E, Fukuzawa H, Gonzalez-Ballester D, Gonzalez-Halphen D, Hallmann A, Hanikenne M, Hippler M, Inwood W, Jabbari K, Kalanon M, Kuras R, Lefebvre PA, Lemaire SD, Lobanov AV, Lohr M, Manuell A, Meier I, Mets L, Mittag M, Mittelmeier T, Moroney JV, Moseley J, Napoli C, Nedelcu AM, Niyogi K, Novoselov SV, Paulsen IT, Pazour G, Purton S, Ral JP, Riano-Pachon DM, Riekhof W, Rymarquis L, Schroda M, Stern D, Umen J, Willows R, Wilson N, Zimmer SL, Allmer J, Balk J, Bisova K, Chen CJ, Elias M, Gendler K, Hauser C, Lamb MR, Ledford H, Long JC, Minagawa J, Page MD, Pan J, Pootakham W, Roje S, Rose A, Stahlberg E, Terauchi AM, Yang P, Ball S, Bowler C, Dieckmann CL, Gladyshev VN, Green P, Jorgensen R, Mayfield S, Mueller-Roeber B, Rajamani S, Sayre RT, Brokstein P, Dubchak I, Goodstein D, Hornick L, Huang YW, Jhaveri J, Luo Y, Martinez D, Ngau WC, Otillar B, Poliakov A, Porter A, Szajkowski L, Werner G, Zhou K, Grigoriev IV, Rokhsar DS, Grossman AR (2007) The Chlamydomonas genome reveals the evolution of key animal and plant functions. Science 318:245-250
200. Miller AJ, Smith SJ (1996) Nitrate transport and compart-mentation in cereal roots. J Exp Bot 47:843-854
201. Miller AJ, Fan X, Orsel M, Smith SJ, Wells DM (2007) Nitrate transport and signalling. J Exp Bot 58:2297-2306
202. Minoda A, Sato N, Nozaki H, Okada K, Takahashi H, Sonoike K, Tsuzuki M (2002) Role of sulfoquinovosyl diacylglycerol for the maintenance of photosystem II in Chlamydomonas reinhardtii. Eur J Biochem 269:2353-2358
203. Miura K, Rus A, Sharkhuu A, Yokoi S, Karthikeyan AS, Raghothama KG, Baek D, Koo YD, Jin JB, Bressan RA, Yun D-J, Hasegawa PM (2005) The Arabidopsis SUMO E3 ligase SIZ1 controls phosphate deficiency responses. Proc Natl Acad Sci USA 102:7760-7765
204. Molnar A, Schwach F, Studholme DJ, Thuenemann EC, Baulcombe DC (2007) miRNAs control gene expression in the single-cell alga Chlamydomonas reinhardtii. Nature 447:1126-1129
205. Moseley JL, Grossman AR (2009) Phosphorus limitation from the physiological to the genomic. In: EH Harris, D Stern, GB Witman (eds) The Chlamydomonas Source-book. Academic Press, Amsterdam, pp 189-215
206. Moseley JL, Chang CW, Grossman AR (2006) Genome-based approaches to understanding phosphorus deprivation responses and PSR1 control in Chlamydomonas reinhardtii. Eukaryot Cell 5:26-44
207. Moseley J, Gonzalez-Ballester D, Pootakham W, Bailey S, Grossman AR (2009) Genetic interactions between regulators of Chlamydomonas phosphorus and sulfur deprivation responses. Genetics 181:889-905
208. Muchhal US, Raghothama KG (1999) Transcriptional regulation of plant phosphate transporters. Proc Natl Acad Sci USA 96:5868-5872
209. Murillo M, Leustek T (1995) Adenosine-5¢-triphosphate sul-furylase fom Arabidopsis thaliana and Escherichia coli are functionally equivalent but structurally and kineti-cally divergent: nucleotide sequence of two adenosine-5¢-triphosphate sulfurylase cDNAs fom Arabidopsis thaliana and analysis of a recombinant enzyme. Arch Biochem Biophys 323:195-204
210. Mus F, Dubini A, Seibert M, Posewitz MC, Grossman AR (2007) Anaerobic acclimation in Chlamydomonas rein-hardtii: anoxic gene expression, hydrogenase induction and metabolic pathways. J Biol Chem 282:25475-25486
211. Muttucumaru N, Halford NG, Elmore JS, Dodson AT, Parry M, Shewry PR, Mottram DS (2006) Formation of high levels of acrylamide during the processing of flour derived from sulfate-deprived wheat. J Agric Food Chem 54:8951-8955
212. Naito S, Yokota-Hirai M, Chino M, Komeda Y (1994) Expression of soybean (Glycine max L. Merr.) seed storage protein gene in transgenic Arabidopsis thaliana and its response to nutritional stress and to abscisic acid mutations. Plant Physiol 104:497-503
213. Najafi SM, Harris DA, Yudkin MD (1996) The SpoIIAA protein of Bacillus subtilis has GTP-binding properties. J Bacteriol 178:6632-6634
214. Nakazato H, Okamoto T, Ishikawa M, Okuyama H (1997) Purification and characterization of phosphate inducibly synthesized in Spirodela oligorrhiza grown under phosphate deficient conditions. Plant Physiol 35:437-446
215. Nanatani K, Fujiki T, Kanou K, Takeda-Shitaka M, Umeyama H, Ye L, Wang X, Nakajima T, Uchida T, Maloney PC, Abe K (2007) Topology of AspT, the aspartate: alanine antiporter of Tetragenococcus halophilus, determined by site-directed fluorescence labeling. J Bacteriol 189: 7089-7097
216. Navarro MT, Prieto R, Fernandez E, Galvan A (1996) Constitutive expression of nitrate reductase changes the regulation of nitrate and nitrite transporters in Chlamydomonas reinhardtii. Plant J 9:819-827
217. Nishimura Y, Kikis EA, Zimmer SL, Komine Y, Stern DB (2004) Antisense transcript and RNA processing alterations suppress instability of polyadenylated mRNA in Chlamydomonas chloroplasts. Plant Cell 16:2849-2869
218. Nocito FF, Lancilli C, Crema B, Fourcroy P, Davidian JC, Sacchi GA (2006) Heavy metal stress and sulfate uptake in maize roots. Plant Physiol 141:1138-1148
219. Noctor G, Arisi AC, Jouanin L, Kunert KJ, Rennenberg H, Foyer C (1998) Glutathione: biosynthesis, metabolism and relationship to stress tolerance explored in transgenic plants. J Exp Bot 49:623-647
220. Noji M, Saito K (2002) Molecular and biochemical analysis of serine acetyltransferase and cysteine synthase towards sulfur metabolic engineering in plants. Amino Acids 22:231-243
221. Noji M, Inoue K, Kimura N, Gouda A, Saito K (1998) Isoform-dependent differences in feedback regulation and subcellular localization of serine acetyltransferase involved in cysteine biosynthesis from Arabidopsis thal-iana. J Biol Chem 273:32739-32745
222. Noji M, Takagi Y, Kimura N, Inoue K, Saito M, Horikoshi M, Saito F, Takahashi H, Saito K (2001) Serine acetyl-transferase involved in cysteine biosynthesis from spinach: molecular cloning, characterization and expression analysis of cDNA encoding a plastidic isoform. Plant Cell Physiol 42:627-634
223. Nürnberger T, Abel S, Jost W, Glund K (1990) Induction of an extracellular ribonuclease in cultured tomato cells upon phosphate starvation. Plant Physiol 92:970-976
224. O'Connell KF, Baker RE (1992) Possible cross-regulation of phosphate and sulfate metabolism in Saccharomyces cerevisiae. Genetics 132:63-73
225. Ogawa N, DeRisi J, Brown PO (2000) New components of a system for phosphate accumulation and polyphos-phate metabolism in Saccharomyces cerevisiae revealed by genomic expression analysis. Mol Biol Cell 11: 4309-4321
226. Ohta N, Matsuzaki M, Misumi O, Miyagishima SY, Nozaki H, Tanaka K, Shin IT, Kohara Y, Kuroiwa T (2003) Complete sequence and analysis of the plastid genome of the unicellular red alga Cyanidioschyzon merolae. DNA Res 10:67-77
227. Ohyama K, Fukuzawa H, Kohchi T, Sano T, Sano S, Shirai H, Umesono K, Shiki Y, Takeuchi M, Chang Z, Aota S, Inokuchi H, Ozeki H (1988) Structure and organization of Marchantia polymorpha chloroplast genome. I. Cloning and gene identification. J Mol Biol 203:281-298
228. Okumoto S, Koch W, Tegeder M, Fischer WN, Biehl A, Leister D, Stierhof YD, Frommer WB (2004) Root phloem-specific expression of the plasma membrane amino acid proton co-transporter AAP3. J Exp Bot 55:2155-2168
229. Ozcan S, Dover J, Rosenwald AG, Wolf S, Johnston M (1996) Two glucose transporters in Saccharomyces cer-evisiae are glucose sensors that generate a signal for induction of gene expression. Proc Natl Acad Sci USA 93:12428-12432
230. Ozcan S, Dover J, Johnston M (1998) Glucose sensing and signaling by two glucose receptors in the yeast Saccharo-myces cerevisiae. EMBO J 17:2566-2573
231. Pabo CO, Sauer RT (1992) Transcription factors: structural families and principles of DNA recognition. Annu Rev Biochem 61:1053-1095
232. Pasquale SM, Goodenough UW (1987) Cyclic AMP functions as a primary sexual signal in gametes of Chlamydomonas reinhardtii. J Cell Biol 105:2279-2292
233. Patni NJ, Dhawale SW, Aaronson S (1977) Extracellular phosphatases of Chlamydomonas reinhardi and their regulation. J Bacteriol 130:205-211
234. Peltier G, Schmidt GW (1991) Chlororespiration: an adaptation to nitrogen deficiency in Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 88:4791-4795
235. Petrucco S, Bolchi A, Foroni C, Percudani R, Rossi GL, Ottonello S (1996) A maize gene encoding as NADPH binding enzyme highly homologous to isoflavone reduct-ase is activated in response to sulfur starvation. Plant Cell Environ 8:69-80
236. Peuke AD, Jeschke WD, Hartung W (1998) Foliar application of nitrate or ammonium as sole nitrogen supply in Ricinus communis. II. The flows of cations, chloride and abscisic acid. New Phytol 140:625-636
237. Piedras P, Pineda M, Muñoz J, Cardenas J (1992) Purification and characterization of an L-amino-acid oxidase from Chlamydomonas reinhardtii. Planta 188:13-18
238. Pineda M, Cardenas J (1996) Transport and assimilation of purines in Chlamydomonas reinhardtii. Scientia Marina 60:195-201
239. Plumley FG, Schmidt GW (1989) Nitrogen-dependent regulation of photosynthetic gene expression. Proc Natl Acad Sci USA 86:2678-2682
240. Poirier Y, Thoma S, Somerville C, Schiefelbein J (1991) A mutant in Arabidopsis deficient in xylem loading of phosphate. Plant Physiol 97:1087-1093
241. Pollock SV, Pootakham W, Shibagaki N, Moseley JL, Grossman AR (2005) Insights into the acclimation of Chlamydomonas reinhardtii to sulfur deprivation. Photo-synth Res 86:475-489
242. Pootakham W, Grossman AR (2009) The sulfate transporters of Chlamydononas reinhardtii and their regulation. In Preparation
243. Prieto R, Dubus A, Galvan A, Fernandez E (1996) Isolation and characterization of two new negative regulatory mutants for nitrate assimilation in Chlamydomonas reinhardtii obtained by insertional mutagenesis. Mol Gen Genet 251:461-471
244. Prior A, Uhrig JF, Heins L, Wiesmann A, Lilliq CH, Stolz C, Soll J, Schwenn JD (1999) Structural and kinetic properties of adenylylsulfate reductase from Catheranthus roseus cell cultures. Biochem Biophys Res Commun 1430:25-38
245. Quesada A, Fernández E (1994) Expression of nitrate assimilation related genes in Chlamydomonas reinhardtii. Plant Mol Biol 24:185-194
246. Quesada A, Galván A, Schnell R, Lefebvre PA, Fernández E (1993) Five nitrate assimilation-related loci are clustered in Chlamydomonas reinhardtii. Mol Gen Genet 240: 387-394
247. Quesada A, Galván A, Fernández E (1994) Identification of nitrate transporter genes in Chlamydomonas reinhardtii. Plant J 5:407-419
248. Quesada A, Krapp A, Trueman LJ, Daniel-Vedele F, Fernán-dez E, Forde BG, Caboche M (1997) PCR-identification of a Nicotiana plumbaginigolia cDNA homologous to the high-affintiy nitrate transporters of the crnA family. Plant Mol Biol 34:265-274
249. Quesada A, Gomez I, Fernández E (1998) Clustering of the nitrite reductase gene and a light-regulated gene with nitrate assimilation loci in Chlamydomonas reinhardtii. Planta 206:259-265
250. Quiñones MA, Aparicio PJ (1990) Flavin type action spectrum of nitrate utilization by Monoraphidium braunii. Photobiochem Photobiophys 51:689-692
251. -transport system in the Chlamydomonas reinhardtii nitrate transport mutant S10. Plant Cell Environ 22:1169-1175
252. Quisel J, Wykoff D, Grossman AR (1996) Biochemical characterization of the extracellular phosphatases produced by phosphorus-deprived Chlamydomonas reinhardtii. Plant Physiol 111:839-848
253. Raghothama KG (2000a) Phosphate transport and signaling. Curr Opin Plant Biol 3:182-187
254. Raghothama KG (2000b) Phosphorus acquisition; plant in the driver's seat. Trends Plant Sci 5:412-413
255. Rauser WE (1987) Changes in glutathione content of maize seedlings exposed to cadmium. Plant Sci 51:171-175
256. Ravanel S, Droux M, Douce R (1995a) Methionine biosynthesis in higher plants. Purification and characterization of cystathionine g-synthase from spinach chloroplasts. Arch Biochem Biophys 316:572-584
257. Ravanel S, Ruffet ML, Douce R (1995b) Cloning of an Ara-bidopsis thaliana cDNA encoding cystathionine b-lyase by functional complementation in Escherichia coli. Plant Mol Biol 29:875-882
258. Ravanel S, Job D, Douce R (1996) Purification and properties of cystathionine b-lyase from Arabidopsis thaliana over-expressed in Escherichia coli. Biochem J 320:383-392
259. Ravanel S, Gakiere B, Job D, Douce R (1998a) Cystathio-nine g-synthase from Arabidopsis thaliana: purification and biochemical characterization of the recombinant enzyme overexpressed in Escherichia coli. Biochem J 331:639-648
260. Ravanel S, Gakiere B, Job D, Douce R (1998b) The specific features of methionine biosynthesis and metabolism in plants. Proc Natl Acad Sci USA 95:7805-7812
261. Ravina CG, Barroso C, Vega JM, Gotor C (1999) Cysteine biosynthesis in Chlamydomonas reinhardtii-molecular cloning and regulation of O-acetylserine(thiol)lyase. Eur J Biochem 264:848-853
262. Ravina CG, Chang CI, Tsakraklides GP, McDermott JP, Vega JM, Leustek T, Gotor C, Davies J (2002) Transcrip-tional and post-transcriptional control of cysteine biosynthesis in Chlamydomonas reinhardtii. Plant Physiol 130:2076-2084
263. Rawlins MR, Leaver CJ, May MJ (1995) Characterization of an Arabidopsis thaliana cDNA encoding glutathione synthetase. FEBS Lett 376:81-86
264. Redinbaugh MG, Campbell WH (1998) Nitrate regulation of the oxidative pentose phosphate pathway in maize (Zea mays L.) root platids: induction of 6-phosphogluco-nate dehydorgenase activity, protein and transcript levels. Plant Sci 134:129-140
265. Remans T, Nacry P, Pervent M, Filleur S, Diatloff E, Mounier E, Tillard P, Forde BG, Gojon A (2006) The Arabidopsis NRT1.1 transporter participates in the signaling pathway triggering root colonization of nitrate-rich patches. Proc Natl Acad Sci USA 103:19206-19211
266. Rennenberg H (1982) Glutathione metabolism and possible biological role in higher plants. Phytochem 21:2771-2781
267. Rentsch D, Boorer KJ, Frommer WB (1998) Structure and function of plasma membrane amino acid, oligopeptides and sucrose transporters from higher plants. J Memb Biol 162:177-190
268. Rexach J, Montero B, Fernandez E, Galvan A (1999) Differential regulation of the high affinity nitrite transport systems III and IV in Chlamydomonas reinhardtii. Plant Cell Environ 12:1441-1453
269. Rexach J, Fernandez E, Galvan A (2000) The Chlamydomonas reinhardtii Nar1 gene encodes a chloroplast membrane protein involved in nitrite transport. Plant Cell Environ 12:1441-1453
270. Riekhof WR, Ruckle ME, Lydic TA, Sears BB, Benning C (2003) The sulfolipids 2¢-O-acyl-sulfoquinovosyldiacylg-lycerol and sulfoquinovosyldiacylglycerol are absent from a Chlamydomonas reinhardtii mutant deleted in SQD1. Plant Physiol 133:864-874
271. Ritchie SW, Redinbaugh MG, Shiraishi N, Vrba JM, Campbell WH (1994) Identification of a maize root transcript expressed in the primary response to nitrate: characterization of a cDNA with homology to ferredoxin-NADP oxi-doreductase. Plant Mol Biol 26:679-690
272. Rodriguez C, Sanz P, Gancedo C (2003) New mutations of Saccharomyces cerevisiae that partially relieve both glucose and galactose repression activate the protein kinase Snf1. FEMS Yeast Res 3:77-84
273. Romer S, Dharlingue A, Camara B, Schantz R, Kuntz M (1992) Cysteine synthase from Capsicum annuum chromoplants: characterization and cDNA cloning of an up-regulated enzyme during fruit development. J Biol Chem 267:17966-17970
274. Rost B, Schneider R, Sander C (1997) Protein fold recognition by prediction-based threading. J Mol Biol 270: 471-480
275. Rotte C, Leustek T (2000) Differential subcellular localization and expression of AT P sulfurylase and 5¢-adeny-lylsulfate reductase during ontogenesis of Arabidopsis leaves indicates that cytosolic and plastid forms of ATP sulfurylase may have specialized functions. Plant Physiol 124:715-724
276. Rouached H, Berthomieu P, El Kassis E, Cathala N, Cath-erinot V, Labesse G, Davidian JC, Fourcroy P (2005) Structural and functional analysis of the C-terminal STAS (sulfate transporter and anti-sigma antagonist) domain of the Arabidopsis thaliana sulfate transporter SULTR1.2. J Biol Chem 280:15976-15983
277. Rubio V, Linhares F, Solano R, Martin AC, Iglesias J, Leyva A, Paz-Ares J (2001) A conserved MYB transcription factor involved in phospate starvation signaling both in vascular plants and in unicellular algae. Genes Dev 15:2122-2133
278. Ruffet M-L, Lebrun M, Droux M, Douce R (1995) Sub-cellular localization of serine acetyltransferase from Pisum sativum and characterization of an Arabidopsis thaliana putative cytosolic isoform. Eur J Biochem 227:500-509
279. Ruiz FA, Marchesini N, Seufferheld M, Govindjee, Docampo R (2001) The polyphosphate bodies of Chlamydomonas rein-hardtii possess a proton-pumping pyrophosphatase and are similar to acidocalcisomes. J Biol Chem 276:46196-46203
280. Sachay JE, Wallace RL, Johns MA (1991) Phosphate stress response in hydroponically grown maize. Plant Soil 132:85-90
281. Saito K (2000) Regulation of sulfate transport and synthesis of sulfur-containing amino acids. Curr Opin Plant Biol 3:188-195
282. Saito K, Miura N, Yamazaki M, Hirano H, Murakoshi I (1992) Molecular cloning and bacterial expression of cDNA encoding a plant cysteine synthase. Proc Natl Acad Sci USA 89:8078-8082
283. Saito K, Tatsuguchi K, Takagi Y, Murakoshi I (1994) Isolation and charcterization of cDNA that encodes a putative mitochondrion-localizing isoform of cysteine synthase [O-acetylserine(thiol)lyase] from Spinacia oleracea. J Biol Chem 269:28187-28192
284. Saito K, Yokoyama H, Noji M, Murakoshi I (1995) Molecular cloning and characterization of a plant serine acetyltrans-ferase playing a regulatory role in cysteine biosynthesis from watermelon. J Biol Chem 270:16321-16326
285. Saito K, Inoue K, Fukushima R, Noji M (1997) Genomic structure and expression analyses of serine acetyltrans-ferase gene in Citrullus vulgaris (watermelon). Gene 189:57-63
286. Sato N, Sonoike K, Tsuzuki M, Kawaguchi A (1995a) Impaired Photosystem II in a mutant of Chlamydomonas reinhardtii defective in sulfoquinovosyl diacylglycerol. Eur J Biochem 234:16-23
287. Sato N, Tsuzuki M, Matsuda Y, Ehara T, Osafune T, Kawaguchi A (1995b) Isolation and characterization of mutants affected in lipid metabolism of Chlamydomonas reinhardtii. Eur J Biochem 230:987-993
288. Savard F, Richard C, Guertin M (1996) The Chlamydomonas reinhardtii LI818 gene represents a distant relative of the cabI\II genes that is regulated during the cell cycle and in response to illumination. Plant Mol Biol 32:461-473
289. Scheible WR, Lauerer M, Schulze ED, Caboche M, Stitt M (1997) Accumulation of nitrate in the shoot acts as a signal to regulate shoot-root allocation in tobacco. Plant J 11:671-691
290. Scheller HV, Huang B, Hatch E, Goldsbrough PB (1987) Phytochelatin synthesis and glutathione levels in response to heavy metals in tomato cells. Plant Physiol 85: 1031-1035
291. Schjorring JK, Jensen P (1984) Phosphorus nutrition of barley, buckwheat and rape seedlings. II. Influx and efflux of phosphorus by intact roots of different P status. Physiol Plantarum 61:584-590
292. Schnell RA, Lefebvre PA (1993) Isolation of the Chlamydomonas regulatory gene NIT2 by transposon tagging. Genetics 134:737-747
293. Schreiner O, Lien T, Knutsen G (1975) The capacity for arylsulfatase synthesis in synchronous and synchronized cultures of Chlamydomonas reinhardtii. Biochim Bio-phys Acta 384:180-193
294. Schultze M, Quiclet-Sire B, Kondorosi E, Virelizer H, Glushka JN, Endre G, Gero SD, Kondorosi A (1992) Rhizobium meliloti produces a family of sulfated lipoo-ligosaccharides exhibiting different degrees of plant host specificity. Proc Natl Acad Sci USA 89:192-196
295. Schürmann P, Brunold C (1980) Formation of cysteine from adenosine 5¢-phosphosulfate (APS) in extracts from spinach chloroplasts. Z. Pflanzenphysiol 100:257-268
296. Sechley KA, Yamaya T, Oaks A (1992) Compartmentation of nitrogen assimilation in higher plants. Int Rev Cytol 134:85-163
297. Setya A, Murillo M, Leustek T (1996) Sulfate reduction in higher plants: molecular evidence for a novel 5¢-adeny-lylsulfate reductase. Proc Natl Acad Sci USA 93:13383-13388
298. Shibagaki N, Grossman AR (2004) Probing the function of STAS domains of the Arabidopsis sulfate transporters. J Biol Chem 279:30791-30799
299. Shibagaki N, Grossman AR (2006) The role of the STAS domain in the function and biogenesis of a sulfate transporter as probed by random mutagenesis. J Biol Chem 281:22964-22973
300. Shibagaki N, Rose A, McDermott JP, Fujiwara T, Hayashi H, Yoneyama T, Davies JP (2002) Selenate-resistant mutants of Arabidopsis thaliana identify Sultr1;2, a sulfate transporter required for efficient transport of sulfate into roots. Plant J 29:475-486
301. Shimogawara K, Usuda H (1995) Uptake of inorganic phosphate by suspension-cultured tobacco cells: kinetics and regulation of Pi starvation. Plant Cell Physiol 36:341-351
302. Shimogawara K, Wykoff DD, Usuda H, Grossman AR (1999) Chlamydomonas reinhardtii mutants abnormal in their responses to phosphorus deprivation. Plant Physiol 120:1-10
303. Siderius M, Musgrave A, van den Ende H, Koerten H, Cam-bier P, van der Meer P (1996) Chlamydomonas eugametos (Chlorophyta) stores phosphate in polyphosphate bodies together with calcium. J Phycol 32:402-409
304. Slomovic S, Portnoy V, Liveanu V, Schuster G (2006) RNA polyadenylation in prokaryotes and organelles; different tails tell different tales. Crit Rev Plant Sci 25:65-77
305. Smith FW, Rae AL, Hawkesford MJ (2000) Molecular mechanisms of phosphate and sulphate transort in plants. Biochem Biophys Res Commun 1465:236-245
306. Smith FW, Hawkesford MJ, Ealing PM, Clarkson DT, Vanden Berg PJ, Belcher AR, Warrilow AG (1997) Regulation of expression of a cDNA from barley roots encoding a high affinity sulphate transporter. Plant J 12:875-884
307. Smith H (1995) Physiological and ecological function within the phytochrome family. Annu Rev Plant Physiol Plant Mol Biol 46:289-315
308. Somerville CR, Ogren WL (1980) Inhibition of photosynthesis in Arabidopsis mutants leaf glutamate synthase activity. Nature 286:257-259
309. 2. Proc Natl Acad Sci USA 101:7787-7792
310. Stacey G, Koh S, Granger C, Becker JM (2002) Peptide transport in plants. Trends Plant Sci 7:257-263
311. Stitt M (1999) Nitrate regulation of metabolism and growth. Curr Opin Plant Biol 2:178-186
312. Stitt M, Krapp A (1999) the interaction betwen elevated carbon dioxide and nitrogen nutrition: the physiological and molecualr background. Plant Cell Environ 22:583-621
313. Suetsugu N, Wada M (2007) Chloroplast photorelocation movement mediated by phototropin family proteins in green plants. J Biol Chem 388:927-935
314. Superti-Furga A, Rossi A, Steinmann B, Gitzelmann R (1996) A chondrodysplasia family produced by mutations in the diastrophic dysplasia sulfate transporter gene: genotype/phenotype correlations. Am J Med Genet 63:144-147
315. Suzuki A, Rothstein SJ (1997) Structure and regulation of ferredoxin-dependent glutamate synthase from Arabi-dopsis thaliana: cloning of cDNA, expression in different tissues of wild-type and gltS mutant strains and light induction. Eur J Biochem 243:708-718
316. Tadano T, Ozawa K, Sakai H, Osaki M, Matsui H (1993) Secretion of acid phosphatase by the roots of crop plants under phosphorus-deficient conditions and some properties of the enzyme secreted by lupin roots. Plant Soil 155-156:95-98
317. Takahashi H, Yamazaki M, Sasakura N, Watanabe A, Leus-tek T, de Almeida Engler J, Engler G, Van Montagu M, Saito K (1997) Regulation of sulfur assimilation in higher plants: a sulfate transporter induced in sulfate starved roots plays a central role in Arabidopsis thaliana. Proc Natl Acad Sci USA 94:11102-11107
318. Takahashi H, Watanabe-Takahashi A, Smith F, Blake-Kalff M, Hawkesford MJ, Saito K (2000) The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana. Plant J 23:171-182
319. Takahashi H, Braby CE, Grossman AR (2001) Sulfur economy and cell wall biosynthesis during sulfur limitation of Chlamydomonas reinhardtii. Plant Physiol 127: 665-673
320. Taylor CB, Green PJ (1991) Genes with homology to fungal and S-gene RNases are expressed in Arabidopsis thaliana. Plant Physiol 96:980-984
321. Taylor CB, Bariola PA, del Cardayré SB, Raines RT, Green PJ (1993) RNS2: a senescence-associated RNase of Ara-bidopsis that diverged from the S-RNases before specia-tion. Proc Natl Acad Sci USA 90:5118-5122
322. Trull MC, Guiltinan MJ, Lynch JP, Deikman J (1997) The response of wild-type and ABA mutant of Arabidopsis thaliana to phosphorous starvation. Plant Cell Environ 20:85-92
323. Tsay YF, Chiu CC, Tsai CB, Ho CH, Hsu PK (2007) Nitrate transporters and peptide transporters. FEBS Lett 581:2290-2300
324. Tucker K, Fadool DA (2002) Neurotrophin modulation of voltage-gated potassium channels in rat through TrkB receptors is time and sensory experience dependent. J Physiol 542:413-429
325. Turmel M, Otis C, Lemieux C (1999) The complete chloro-plast DNA sequence of the green alga Nephroselmis oliva-cea: insights into the architecture of ancestral chloroplast genomes. Proc Natl Acad Sci USA 96:10248-10253
326. Turmel M, Otis C, Lemieux C (2005) The complete chlo-roplast DNA sequences of the charophycean green algae Staurastrum and Zygnema reveal that the chloroplast genome underwent extensive changes during the evolution of the Zygnematales. BMC Biol 3:22
327. Turmel M, Otis C, Lemieux C (2006) The chloroplast genome sequence of Chara vulgaris sheds new light into the closest green algal relatives of land plants. Mol Biol Evol 23:1324-1338
328. Usami S, Abe S, Weston MD, Shinkawa H, Van Camp G, Kimberling WJ (1999) Non-syndromic hearing loss associated with enlarged vestibular aqueduct is caused by PDS mutations. Hum Genet 104:188-192
329. Vallon O, Bulte L, Kuras R, Olive J, Wollman FA (1993) Extensive accumulation of an extracellular L-amino-acid oxidase during gametogenesis of Chlamydomonas reind-hartii. Eur J Biochem 215:351-360
330. van der Leij M, Smith SJ, Miller AJ (1998) Remobiliza-tion of vacuolar stored nitrate in barley root cells. Planta 205:64-72
331. Varin L, Marsolais F, Richard M, Rouleau M (1997) Biochemistry and molecular biology of plant sulfotrans-ferases. FASEB J 11:517-525
332. Veljanovski V, Vanderbeld B, Knowles VL, Snedden WA, Plaxton WC (2006) Biochemical and molecular characterization of AtPAP26, a vacuolar purple acid phosphatase up-regulated in phosphate-deprived Arabidopsis suspension cells and seedlings. Plant Physiol 142:1282-1293
333. Vidmar JJ, Schjoerring JK, Touraine B, Glass ADM (1999) Regulation of the hvst1 gene encoding a high-affinity sul-fate transporter from Hordeum vulgare. Plant Mol Biol 40:883-892
334. Wakasugi T, Nagai T, Kapoor M, Sugita M, Ito M, Ito S, Tsudzuki J, Nakashima K, Tsudzuki T, Suzuki Y, Hamada A, Ohta T, Inamura A, Yoshinaga K, Sugiura M (1997) Complete nucleotide sequence of the chloroplast genome from the green alga Chlorella vulgaris: the existence of genes possibly involved in chloroplast division. Proc Natl Acad Sci USA 94:5967-5972
335. Walch-Liu P, Neumann D, Bangerth F, Engels C (2000) Rapid effects of nitrogen form on leaf morphogenesis in tobacco. J Exp Bot 51:227-237
336. Wallsgrove RM, Lea PJ, Miflin BJ (1983) Intracellular localization of aspartate kinase and the enzymes of threo-nine and methionine biosynthesis in green leaves. Plant Physiol 71:780-784
337. Wang YH, Garvin DF, Kochian LV (2002) Rapid induction of regulatory and transporter genes in response to phosphorus, potassium and iron deficiencies in tomato roots: evidence for cross talk and root/rhizosphere-mediated signals. Plant Physiol 130:1361-1370
338. Warman PR, Sampson HG (1994) Effect of sulfur additions on the yield and elemental composition of canola and spring wheat. J Plant Nutr 17:1817-1825
339. Weiss M, Bental M, Pick U (1991) Hydrolysis of polyphos-phates and permeability changes in response to osmotic shocks in cells of the halotolerant alga Dunaliella. Plant Physiol 97:1241-1248
340. Werner TP, Amrhein N, Freimoser FM (2007) Inorganic polyphosphate occurs
341. Wetzel RG (1983) Limnology (2nd edn). Saunders College Publishing, Philadelphia, PA
342. Wykoff D, Davies J, Grossman A (1998) The regulation of photosynthetic electron transport during nutrient deprivation in Chlamydomonas reinhardtii. Plant Physiol 117:129-139
343. Wykoff D, Grossman A, Weeks DP, Usuda H, Shimogawara K (1999) Psr1, a nuclear localized protein that regulates phosphorus metabolism in Chlamydomonas. Proc Natl Acad Sci USA 96:15336-15341
344. Yao Q, Li XL, Feng G, Christie P (2001) Mobilization of sparingly soluble inorganic phosphates by external mycelium of an arbuscular mycorrhizal fungus. Plant Soil 230:279-285
345. Yehudai-Resheff S, Zimmer SL, Komine Y, Stern DB (2007) Integration of chloroplast nucleic acid metabolism into the phosphate deprivation response in Chlamydomonas reinhardtii. Plant Cell 19:1023-1038
346. Yildiz FH, Davies JP, Grossman AR (1994) Characterization of sulfate transport in Chlamydomonas reinhardtii during sulfur-limited and sulfur-sufficient growth. Plant Physiol 104:981-987
347. Yildiz FH, Davies JP, Grossman AR (1996) Sulfur availability and the SAC1 gene control adenosine triphosphate sul-furylase gene expression in Chlamydomonas reinhardtii. Plant Physiol 112:669-675
348. Yoneda Y, Hieda M, Nagoshi E, Miyamoto Y (1999) Nucle-ocytoplasmic protein transport and recycling of Ran. Cell Struct Funct 24:425-433
349. Yonekura-Sakakibara K, Onda Y, Ashikari T, Tanaka Y, Kusumi T, Hase T (2000) Analysis of reductant supply systems for ferredoxin-dependent sulfite reductase in photosynthetic and nonphotosynthetic organs of maize. Plant Physiol 122:887-894
350. Yoshimoto N, Takahashi H, Smith WS, Yamaya T, Saito K (2002) Two distinct high affinity sulfate transporters with different inducibilities mediate uptake of sulfate in Arabi-dopsis roots. Plant J 29:465-473
351. Yoshimoto N, Inoue E, Watanabe-Takahashi A, Saito K, Takahashi H (2007) Posttranscriptional regulation of high-affinity sulfate transporters in Arabidopsis by sulfur nutrition. Plant Physiol 145:378-388
352. Youssefian S, Nakamura M, Sano H (1993) Tobacco plants transformed with the O-acetylserine(thiol)lyase gene of wheat are resistant to toxic levels of hydrogen sulphide gas. Plant J 4:759-769
353. Zhang D, Lefebvre PA (1997) FAR1, a negative regulatory locus required for the repression if the nitrate reduct-ase gene in Chlamydomonas reinhardtii. Genetics 146: 121-133
354. Zhang L, Melis A (2002) Probing green algal hydrogen production. Philos Trans R Soc Lond B Biol Sci 357:1499-1507; discussion 1507-1411
355. Zhang H, Jennings A, Barlow PW, Forde BG (1999) Dual pathways for regulation of root branching by nitrate. Proc Natl Acad Sci USA 96:6529-6534
356. Zhang Z, Shrager J, Jain M, Chang CW, Vallon O, Grossman AR (2004) Insights into the survival of Chlamydomonas reinhardtii during sulfur starvation based on microarray analysis of gene expression. Eukaryot Cell 3:1331-1348
357. Zhao T, Li G, Mi S, Li S, Hannon GJ, Wang XJ, Qi Y (2007) A complex system of small RNAs in the unicellular green alga Chlamydomonas reinhardtii. Genes Dev 21:1190-1203
358. Zhou D, Okamoto M, Vidmar JJ, Glass ADM (1999) Regulation of a putative high-affinity nitrate transporter (nrt2;1At) in roots of Arabidopsis thaliana. Plant J 17:563-568
359. Zhou JJ, Fernandez E, Galvan A, Miller AJ (2000) A high affinity nitrate transport system from Chlamydomonas requires two gene products. FEBS Lett 466:225-227