-
1
-
-
0347444723
-
MicroRNAs: Genomics, biogenesis, mechanism, and function
-
Bartel, D. P. MicroRNAs: genomics, biogenesis, mechanism, and function. Cell 116, 281-297 (2004).
-
(2004)
Cell
, vol.116
, pp. 281-297
-
-
Bartel, D.P.1
-
2
-
-
0037072660
-
Small RNAs correspond to centromere heterochromatic repeats
-
Reinhart, B. J. & Bartel, D. P. Small RNAs correspond to centromere heterochromatic repeats. Science 297, 1831 (2002).
-
(2002)
Science
, vol.297
, pp. 1831
-
-
Reinhart, B.J.1
Bartel, D.P.2
-
3
-
-
0035984059
-
Endogenous and silencing-associated small RNAs in plants
-
Llave, C., Kasschau, K. D., Rector, M. A. & Carrington, J. C. Endogenous and silencing-associated small RNAs in plants. Plant Cell 14, 1605-1619 (2002).
-
(2002)
Plant Cell
, vol.14
, pp. 1605-1619
-
-
Llave, C.1
Kasschau, K.D.2
Rector, M.A.3
Carrington, J.C.4
-
4
-
-
0035160923
-
RNA interference in Trypanosoma brucei: Cloning of small interfering RNAs provides evidence for retroposon-derived 24- 26-nucleotide RNAs
-
Djikeng, A., Shi, H. F., Tschudi, C. & Ullu, E. RNA interference in Trypanosoma brucei: Cloning of small interfering RNAs provides evidence for retroposon-derived 24- 26-nucleotide RNAs. RNA 7, 1522-1530 (2001).
-
(2001)
RNA
, vol.7
, pp. 1522-1530
-
-
Djikeng, A.1
Shi, H.F.2
Tschudi, C.3
Ullu, E.4
-
5
-
-
0037737975
-
-
Ambros, V., Lee, R. C., Lavanway, A., Williams, P. T. & Jewell, D. MicroRNAs and other tiny endogenous RNAs in C. elegans. Curr. Biol. 13, 807-818 (2003).
-
Ambros, V., Lee, R. C., Lavanway, A., Williams, P. T. & Jewell, D. MicroRNAs and other tiny endogenous RNAs in C. elegans. Curr. Biol. 13, 807-818 (2003).
-
-
-
-
6
-
-
9644272448
-
Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana
-
Allen, E. et al. Evolution of microRNA genes by inverted duplication of target gene sequences in Arabidopsis thaliana. Nature Genet. 36, 1282-1290 (2004).
-
(2004)
Nature Genet
, vol.36
, pp. 1282-1290
-
-
Allen, E.1
-
7
-
-
33745951984
-
On the origin and functions of RNA-mediated silencing: From protists to man
-
Cerutti, H. & Casas-Mollano, J. A. On the origin and functions of RNA-mediated silencing: from protists to man. Curr. Genet. 50, 81-99 (2006).
-
(2006)
Curr. Genet
, vol.50
, pp. 81-99
-
-
Cerutti, H.1
Casas-Mollano, J.A.2
-
8
-
-
33749404806
-
MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant
-
Lu, C. et al. MicroRNAs and other small RNAs enriched in the Arabidopsis RNA-dependent RNA polymerase-2 mutant. Genome Res. 16, 1276-1288 (2006).
-
(2006)
Genome Res
, vol.16
, pp. 1276-1288
-
-
Lu, C.1
-
9
-
-
10744225153
-
Asymmetry in the assembly of the RNAi enzyme complex
-
Schwarz, D. S. et al. Asymmetry in the assembly of the RNAi enzyme complex. Cell 115, 199-208 (2003).
-
(2003)
Cell
, vol.115
, pp. 199-208
-
-
Schwarz, D.S.1
-
10
-
-
0142165224
-
Functional siRNAs and miRNAs exhibit strand bias
-
Khvorova, A., Reynolds, A. & Jayasena, S. D. Functional siRNAs and miRNAs exhibit strand bias. Cell 115, 209-216 (2003).
-
(2003)
Cell
, vol.115
, pp. 209-216
-
-
Khvorova, A.1
Reynolds, A.2
Jayasena, S.D.3
-
11
-
-
4944225347
-
Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs
-
Vazquez, F. et al. Endogenous trans-acting siRNAs regulate the accumulation of Arabidopsis mRNAs. Mol. Cell 16, 69-79 (2004).
-
(2004)
Mol. Cell
, vol.16
, pp. 69-79
-
-
Vazquez, F.1
-
12
-
-
29244490062
-
Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis
-
Borsani, O., Zhu, J., Verslues, P. E., Sunkar, R. & Zhu, J.-K. Endogenous siRNAs derived from a pair of natural cis-antisense transcripts regulate salt tolerance in Arabidopsis. Cell 123, 1279-1291 (2005).
-
(2005)
Cell
, vol.123
, pp. 1279-1291
-
-
Borsani, O.1
Zhu, J.2
Verslues, P.E.3
Sunkar, R.4
Zhu, J.-K.5
-
13
-
-
4644286235
-
SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis
-
Peragine, A., Yoshikawa, M., Wu, G., Albrecht, H. L. & Poethig, R. S. SGS3 and SGS2/SDE1/RDR6 are required for juvenile development and the production of trans-acting siRNAs in Arabidopsis. Genes Dev. 18, 2368-2379 (2004).
-
(2004)
Genes Dev
, vol.18
, pp. 2368-2379
-
-
Peragine, A.1
Yoshikawa, M.2
Wu, G.3
Albrecht, H.L.4
Poethig, R.S.5
-
14
-
-
33744520104
-
Molecular basis for the recognition of primary micro-RNAs by the Drosha-DGCR8 complex
-
Han, J. et al. Molecular basis for the recognition of primary micro-RNAs by the Drosha-DGCR8 complex. Cell 125, 887-901 (2006).
-
(2006)
Cell
, vol.125
, pp. 887-901
-
-
Han, J.1
-
15
-
-
0037144457
-
Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA
-
Llave, C., Xie, Z., Kasschau, K. D. & Carrington, J. C. Cleavage of Scarecrow-like mRNA targets directed by a class of Arabidopsis miRNA. Science 297, 2053-2056 (2002).
-
(2002)
Science
, vol.297
, pp. 2053-2056
-
-
Llave, C.1
Xie, Z.2
Kasschau, K.D.3
Carrington, J.C.4
-
16
-
-
16244398080
-
Specific effects of microRNAs on the plant transcriptome
-
Schwab, R. et al. Specific effects of microRNAs on the plant transcriptome. Dev. Cell 8, 517-527 (2005).
-
(2005)
Dev. Cell
, vol.8
, pp. 517-527
-
-
Schwab, R.1
-
17
-
-
22244458310
-
Proteomic analysis of a eukaryotic cilium
-
Pazour, G. J., Agrin, N., Leszyk, J. & Witman, G. B. Proteomic analysis of a eukaryotic cilium. J. Cell Biol. 170, 103-113 (2005).
-
(2005)
J. Cell Biol
, vol.170
, pp. 103-113
-
-
Pazour, G.J.1
Agrin, N.2
Leszyk, J.3
Witman, G.B.4
-
18
-
-
13644256193
-
-
Yu, B. et al. Methylation as a crucial step in plant microRNA biogenesis. Science 307, 932-935 (2005).
-
Yu, B. et al. Methylation as a crucial step in plant microRNA biogenesis. Science 307, 932-935 (2005).
-
-
-
-
19
-
-
32644454064
-
HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2′ OH of the 3′ terminal nucleotide
-
Yang, Z., Ebright, Y. W., Yu, B. & Chen, X. HEN1 recognizes 21-24 nt small RNA duplexes and deposits a methyl group onto the 2′ OH of the 3′ terminal nucleotide. Nucleic Acids Res. 34, 667-675 (2006).
-
(2006)
Nucleic Acids Res
, vol.34
, pp. 667-675
-
-
Yang, Z.1
Ebright, Y.W.2
Yu, B.3
Chen, X.4
-
20
-
-
23944493378
-
Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis
-
Li, J., Yang, Z., Yu, B., Liu, J. & Chen, X. Methylation protects miRNAs and siRNAs from a 3′-end uridylation activity in Arabidopsis. Curr. Biol. 15, 1501-1507 (2005).
-
(2005)
Curr. Biol
, vol.15
, pp. 1501-1507
-
-
Li, J.1
Yang, Z.2
Yu, B.3
Liu, J.4
Chen, X.5
-
21
-
-
1842484780
-
Ancient microRNA target sequences in plants
-
Floyd, S. K. & Bowman, J. L. Ancient microRNA target sequences in plants. Nature 428, 485-486 (2004).
-
(2004)
Nature
, vol.428
, pp. 485-486
-
-
Floyd, S.K.1
Bowman, J.L.2
-
22
-
-
32944464673
-
Cloning and characterization of micro-RNAs from moss
-
Arazi, T. et al. Cloning and characterization of micro-RNAs from moss. Plant J. 43, 837-848 (2005).
-
(2005)
Plant J
, vol.43
, pp. 837-848
-
-
Arazi, T.1
-
23
-
-
4644242349
-
RNA silencing in plants
-
Baulcombe, D. RNA silencing in plants. Nature 431, 356-363 (2004).
-
(2004)
Nature
, vol.431
, pp. 356-363
-
-
Baulcombe, D.1
-
24
-
-
0001168399
-
Procedures for the generation of mature Chlamydomonas reinhardtii zygotes for molecular and biochemical analyses
-
Wegener, D., Treier, U. & Beck, C. F. Procedures for the generation of mature Chlamydomonas reinhardtii zygotes for molecular and biochemical analyses. Plant Physiol. 90, 512-515 (1989).
-
(1989)
Plant Physiol
, vol.90
, pp. 512-515
-
-
Wegener, D.1
Treier, U.2
Beck, C.F.3
-
25
-
-
84945516931
-
-
Chappell, L., Baulcombe, D. & Molnar, A. in Current Protocols in Microbiology (eds Coico, R. et al.) 16H.2.1-16H.2.17 (Wiley, Hoboken, NJ, 2005).
-
Chappell, L., Baulcombe, D. & Molnar, A. in Current Protocols in Microbiology (eds Coico, R. et al.) 16H.2.1-16H.2.17 (Wiley, Hoboken, NJ, 2005).
-
-
-
-
26
-
-
23844550243
-
Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits micro RNAs and short interfering RNAs
-
Baumberger, N. & Baulcombe, D. C. Arabidopsis ARGONAUTE1 is an RNA Slicer that selectively recruits micro RNAs and short interfering RNAs. Proc. Natl Acad. Sci. USA 102, 11928-11933 (2005).
-
(2005)
Proc. Natl Acad. Sci. USA
, vol.102
, pp. 11928-11933
-
-
Baumberger, N.1
Baulcombe, D.C.2
-
27
-
-
24044455869
-
Genome sequencing in microfabricated high-density picolitre reactors
-
Margulies, M. et al. Genome sequencing in microfabricated high-density picolitre reactors. Nature 437, 376-380 (2005).
-
(2005)
Nature
, vol.437
, pp. 376-380
-
-
Margulies, M.1
-
28
-
-
13244255415
-
MUSCLE: A multiple sequence alignment method with reduced time and space complexity
-
Edgar, R. C. MUSCLE: a multiple sequence alignment method with reduced time and space complexity. BMC Bioinformatics 5, 1-19 (2004).
-
(2004)
BMC Bioinformatics
, vol.5
, pp. 1-19
-
-
Edgar, R.C.1
-
29
-
-
34249772381
-
Fast folding and comparison of RNA secondary structures
-
Hofacker, I. L. et al. Fast folding and comparison of RNA secondary structures. Monatsh. Chem. 125, 167-188 (1994).
-
(1994)
Monatsh. Chem
, vol.125
, pp. 167-188
-
-
Hofacker, I.L.1
-
30
-
-
10244243802
-
Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences
-
Bonnet, E., Wuyts, J., Rouze, P. & Van de Peer, Y. Evidence that microRNA precursors, unlike other non-coding RNAs, have lower folding free energies than random sequences. Bioinformatics 20, 2911-2917 (2004).
-
(2004)
Bioinformatics
, vol.20
, pp. 2911-2917
-
-
Bonnet, E.1
Wuyts, J.2
Rouze, P.3
Van de Peer, Y.4
|