SulP, a nuclear gene encoding a putative chloroplast-targeted sulfate permease in Chlamydomonas reinhardtii

Planta

Volumn 218, Issue 1, 2003, Pages 98-106

  Chen, Hsu Ching ^a   Yokthongwattana, Kittisak ^a   Newton, A Jamila ^a   Melis, Anastasios ^a  

^a UNIVERSITY OF CALIFORNIA   (United States)

Author keywords

Chlamydomonas; Chloroplast; Evolution; Gene migration; Sulfate transport

Indexed keywords

ENZYMES; GENES; HYDROPHILICITY;

CHLOROPLASTS;

ALGAE;

ANION TRANSPORT PROTEIN; PRIMER DNA; SULFATE PERMEASE;

AMINO ACID SEQUENCE; ANIMAL; ARTICLE; CHLAMYDOMONAS REINHARDTII; CHLOROPLAST; CLASSIFICATION; ENZYMOLOGY; EXON; GENE; GENETICS; GREEN ALGA; INTRON; MOLECULAR CLONING; MOLECULAR GENETICS; NUCLEOTIDE SEQUENCE; PHYLOGENY; POLYMERASE CHAIN REACTION; RESTRICTION MAPPING; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY;

ALGAE, GREEN; AMINO ACID SEQUENCE; ANIMALS; ANION TRANSPORT PROTEINS; BASE SEQUENCE; CHLAMYDOMONAS REINHARDTII; CHLOROPLASTS; CLONING, MOLECULAR; CONSERVED SEQUENCE; DNA PRIMERS; EXONS; GENES, PLANT; GENES, PROTOZOAN; INTRONS; MOLECULAR SEQUENCE DATA; PHYLOGENY; POLYMERASE CHAIN REACTION; RESTRICTION MAPPING; SEQUENCE ALIGNMENT; SEQUENCE HOMOLOGY, AMINO ACID;

ALGAE; ANIMALIA; ARABIDOPSIS; ARABIDOPSIS THALIANA; CHLAMYDOMONAS; CHLAMYDOMONAS REINHARDTII; CHLOROPHYTA; EUKARYOTA; MARCHANTIA; MARCHANTIA POLYMORPHA; PROKARYOTA; TRACHEOPHYTA;

EID: 0347300314     PISSN: 00320935     EISSN: None     Source Type: Journal    
DOI: 10.1007/s00425-003-1076-6     Document Type: Article

References (37)

1. Altschul SF, Madden TL, Schäffer AA, Zhang J, Zhang Z, Miller W, Lipman DJ (1997) Gapped BLAST and PSI-BLAST: a new generation of protein database search program. Nucleic Acids Res. 25:3389-3402
2. Ames GFL (1986) Bacterial periplasmic transport systems: structure, mechanism, and evolution. Annu Rev Biochem 55:397-425
3. Arst NHJ (1968) Genetic analysis of the first steps of sulphate metabolism in Aspergillus nidulans. Nature 219:268-270
4. Blanchard JL, Lynch M (2000) Organellar genes: Why do they end up in the nucleus? Trends Genet 16:315-320
5. Breton A, Surdin-Kerjan Y (1977) Sulfate uptake in Saccharomyces cerevisiae: biochemical and genetics study. J Bacteriol 132:224-232
6. Cline K (2000) Gateway to the chloroplast. Nature 403:148-149
7. Davies JP, Yildiz FH, Grossman AR (1994) Mutants of Chlamydomonas with aberrant responses to sulfur deprivation. Plant Cell 6:53-63
8. Davies JP, Yildiz FH, Grossman AR (1996) Sac1, a putative regulator that is critical for survival of Chlamydomonas reinhardtii during sulfur deprivation. EMBO J 15:2150-9
9. Dreyfuss J (1964) Characterization of a sulfate-and thiosulfate- transporting system in Salmonella typhimurium. J Biol Chem 239:2292-2297
10. Emanuelsson O, Henrik Nielsen H, von Heijne G (1999) ChloroP, a neural network-based method for predicting chloroplast transit peptides and their cleavage sites. Protein Sci 8:978-984
11. Gorman DS, Levine RP (1965) Cytochrome f and plastocyanin: their sequence in the photosynthetic electron transport chain of Chlamydomonas reinhardtii. Proc Natl Acad Sci USA 54:1665-1669
12. Green L, Grossman A (1988) Changes in sulfate transport characteristics and protein composition of Anacystis nidulans R2 during sulfur deprivation. J Bacteriol 170:583-587
13. Gumpel NJ, Purton S (1994) Playing tag with Chlamydomonas. Trends Cell Biol 4:299-301
14. Hell R (1997) Molecular physiology of plant sulfur metabolism. Planta 202:138-48
15. Hofmann K, Stoffel W (1993) TMbase - A database of membrane spanning proteins segments. Biol Chem Hoppe-Seyler 374:166
16. Kaneko T, Sato S, Kotani H, Tanaka A et al (1996) Sequence analysis of the genome of the unicellular cyanobacterium Synechocystis sp. strain PCC6803. II. Sequence determination of the entire genome and assignment of potential protein-coding regions. DNA Res 3:109-136
17. Knauf U, Hachtel W (1999) A 22 kb fragment of the 53 kb plastid genome of the colourless alga Prototheka wickerhamii containing atp-, rpl-,rps-, rrn-, and trn-genes. Direct submission to GenBank, accession number: AJ245645. NCBI web page: http://www.ncbi.nlm.nih.gov
18. Kohn C, Schumann J (1993) Nucleotide sequence and homology comparison of two genes of the sulfate transport operon from the cyanobacterium Synechocystis sp. PCC6803. Plant Mol Biol 21:409-412
19. Laudenbach DE, Grossman A (1991) Characterization and mutagenesis of sulfur-regulated genes in a cyanobacterium: evidence for function in sulfate transport. J Bacteriol 173:2739-2750
20. Lemieux C, Otis C, Turmel M (2000) Ancestral chloroplast genome in Mesostigma viride reveals an early branch of green plant evolution. Nature 403:649-652
21. Leustek T, Martin MN, Bick JA, Davies JP (2000) Pathways and regulation of sulfur metabolism revealed through molecular and genetic studies. Annu Rev Plant Physiol Plant Mol Biol 51:141-165
22. Lukaszkiewicz Z (1976) Hyper-repressible operator-type mutant in sulphate permease gene of Aspergillus nidulans. Nature 259:337-338
23. Marzluf GA (1970a) Genetic and biochemical studies of distinct sulfate permease species in different developmental stages of Neurospora crassa. Arch Biochem Biophys 138:254-263
24. Marzluf GA (1970b) Genetic and metabolic controls for sulfate metabolism in Neurospora crassa: isolation and study of chromate-resistant and sulfate transport-negative mutants. J Bacteriol 102:716-721
25. Melis A (1999) Photosystem-II damage and repair cycle in chloroplasts: what modulates the rate of photodamage in vivo? Trends Plant Sci 4:130-135
26. Ohyma K, Fukuzawa H, Kohchi T, Shirai H, Sano T et al (1986) Chloroplast gene organization deduced from complete sequence of liverwort Marchantia polymorpha chloroplast DNA. Nature 322:572-574
27. Palmer JD (2003) The symbiotic birth and spread of plastids: How many times and whodunit? J Phycol 39:4-11
28. Roomans GM, Kuypers GAY, Theuvenet APR, Borst-Pauwels GWFH (1979) Kinetics of sulfate uptake by yeast. Biochim Biophys Acta 551:197-206
29. Sambrook J, Fritsch EF, Maniatis T (1989) Molecular cloning. A laboratory manual, 2nd edn. Cold Spring Harbor Laboratory Press, Cold Spring Harbor, NY
30. Simpson CL, Stern DB (2002) The treasure trove of algal chloroplast genomes. Surprises in architecture and gene content, and their functional implications. Plant Physiol 129:957-66
31. Sirko A, Hryniewicz MM, Hulanicka DM, Boeck A (1990) Sulfate and thiosulfate transport in Escherichia coli K-12: nucleotide sequence and expression of the cysTWAM gene cluster. J Bacteriol 172:3351-3357
32. Takahashi H, Asanuma W, Saito K (1999) Cloning of an Arabidopsis cDNA encoding a chloroplast localizing sulfate transporter isoform. J Exp Bot 50:1713-1714
33. Takahashi H, Watanabe-Takahashi A, Smith FW, Blake-Kalff M, Hawkesford MJ, Saito K (2000) The roles of three functional sulphate transporters involved in uptake and translocation of sulphate in Arabidopsis thaliana Plant J 23:171-182
34. Takami H, Nakasone K, Takaki Y, Maeno G, Sasaki Y, Masui N, Fuji F, Hirama C, Nakamura Y, Ogasawara N, Kuhara S, Horikoshi K (2000) Complete genome sequence of the alkaliphilic bacterium Bacillus halodurans and genomic sequence comparison with Bacillus subtilis. Nucleic Acids Res 28:4317-4331
35. Turmel M, Otis C, Lemieux C (1999) The complete chloroplast DNA sequence of the green alga Nephroselmis olivacea: insights into the architecture of ancestral chloroplast genomes. Proc Natl Acad Sci USA 96:10248-10253
36. Wakasugi T, Nagai T, Kapoor M, Sugita M, Ito M (1997) Complete nucleotide sequence of the chloroplast genome from the green alga Chlorella vulgaris: the existence of genes possibly involved in chloroplast division. Proc Natl Acad Sci USA 94:5967-5972
37. Zhang L, Niyogi KK, Baroli I, Nemson JA, Grossman A, Melis A (1997) DNA insertional mutagenesis for the elucidation of a photosystem II repair process in the green alga Chlamydomonas reinhardtii. Photosynth Res 53:173-184