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Volumn 18, Issue 5, 2013, Pages 5706-5722

Virtual screening and structure-based discovery of indole acylguanidines as potent β-secretase (BACE1) inhibitors

Author keywords

Crystal structure; Docking; Indole acylguanidine; Structure based lead design; Virtual screening

Indexed keywords

ASPARTIC PROTEINASE; BACE1 PROTEIN, HUMAN; GUANIDINE DERIVATIVE; INDOLE DERIVATIVE; PROTEINASE INHIBITOR; SECRETASE;

EID: 84878321713     PISSN: None     EISSN: 14203049     Source Type: Journal    
DOI: 10.3390/molecules18055706     Document Type: Article
Times cited : (27)

References (44)
  • 2
    • 4344580888 scopus 로고    scopus 로고
    • Strategies for disease modification in Alzheimer's disease
    • DOI 10.1038/nrn1495
    • Citron, M. Strategies for disease modification in Alzheimer's disease. Nat. Rev. Neurosci. 2004, 5. 677-685. (Pubitemid 39150139)
    • (2004) Nature Reviews Neuroscience , vol.5 , Issue.9 , pp. 677-685
    • Citron, M.1
  • 3
    • 0037135111 scopus 로고    scopus 로고
    • The amyloid hypothesis of Alzheimer's disease: Progress and problems on the road to therapeutics
    • DOI 10.1126/science.1072994
    • Hardy, J.; Selkoe, D. J. The amyloid hypothesis of Alzheimer's disease: Progress and problems on the road to therapeutics. Science 2002, 297, 353-356. (Pubitemid 34790756)
    • (2002) Science , vol.297 , Issue.5580 , pp. 353-356
    • Hardy, J.1    Selkoe, D.J.2
  • 5
    • 0033535553 scopus 로고    scopus 로고
    • Two transmembrane aspartates in presenilin-1 required for presenilin endoproteolysis and γ-secretase activity
    • Wolfe, M.S.; Xia, W.; Ostaszewski, B.L.; Diehl, T.S.; Kimberly, W.T.; Selkoe, D. J. Two transmembrane aspartates in presenilin-1 required for presenilin endoproteolysis and γ-secretase activity. Nature 1999, 398, 513-517.
    • (1999) Nature , vol.398 , pp. 513-517
    • Wolfe, M.S.1    Xia, W.2    Ostaszewski, B.L.3    Diehl, T.S.4    Kimberly, W.T.5    Selkoe, D.J.6
  • 6
    • 27744480831 scopus 로고    scopus 로고
    • Protease inhibitors as potential disease-modifying therapeutics for Alzheimer's disease
    • DOI 10.1517/13543784.14.11.1385
    • Beher, D.; Graham, S.L. Protease inhibitors as potential disease-modifying therapeutics for Alzheimer's disease. Expert Opin. Invest. Drugs 2005, 14, 1385-1409. (Pubitemid 41601454)
    • (2005) Expert Opinion on Investigational Drugs , vol.14 , Issue.11 , pp. 1385-1409
    • Beher, D.1    Graham, S.L.2
  • 7
    • 33751063056 scopus 로고    scopus 로고
    • Progress toward the discovery and development of efficacious BACE inhibitors
    • Durham, T.B.; Shepherd, T.A. Progress toward the discovery and development of efficacious BACE inhibitors. Curr. Opin. Drug Discovery Dev. 2006, 9, 776-791. (Pubitemid 44759568)
    • (2006) Current Opinion in Drug Discovery and Development , vol.9 , Issue.6 , pp. 776-791
    • Durham, T.B.1    Shepherd, T.A.2
  • 9
    • 0042334543 scopus 로고    scopus 로고
    • BACE1 (β-secretase) knockout mice do not acquire compensatory gene expression changes or develop neural lesions over time
    • DOI 10.1016/S0969-9961(03)00104-9
    • Luo, Y.; Bolon, B.; Damore, M.A.; Fitzpatrick, D.; Liu, H.; Zhang, J.; Yan, Q.; Vassar, R.; Citron, M. BACE1 (beta-secretase) knockout mice do not acquire compensatory gene expression changes or develop neural lesions over time. Neurobiol. Dis. 2003, 14, 81-88. (Pubitemid 37103182)
    • (2003) Neurobiology of Disease , vol.14 , Issue.1 , pp. 81-88
    • Luo, Y.1    Bolon, B.2    Damore, M.A.3    Fitzpatrick, D.4    Liu, H.5    Zhang, J.6    Yan, Q.7    Vassar, R.8    Citron, M.9
  • 11
    • 52049107367 scopus 로고    scopus 로고
    • BACE1 knock-outs display deficits in activity-dependent potentiation of synaptic transmission at mossy fiber to CA3 synapses in the hippocampus
    • Wang, H.; Song, L.; Laird, F.; Wong, P.C.; Lee, H.K. BACE1 knock-outs display deficits in activity-dependent potentiation of synaptic transmission at mossy fiber to CA3 synapses in the hippocampus. J. Neurosci. 2008, 28, 8677-8681.
    • (2008) J. Neurosci , vol.28 , pp. 8677-8681
    • Wang, H.1    Song, L.2    Laird, F.3    Wong, P.C.4    Lee, H.K.5
  • 20
    • 0032811868 scopus 로고    scopus 로고
    • Rapid calculation of polar molecular surface area and its application to the prediction of transport phenomena. 2. Prediction of blood-brain barrier penetration
    • DOI 10.1021/js980402t
    • Clark, D.E. Rapid calculation of polar molecular surface area and its application to the prediction of transport phenomena. 2. Prediction of blood-brain barrier penetration. J. Pharm. Sci. 1999, 88, 815-821. (Pubitemid 29398551)
    • (1999) Journal of Pharmaceutical Sciences , vol.88 , Issue.8 , pp. 815-821
    • Clark, D.E.1
  • 25
    • 77249094569 scopus 로고    scopus 로고
    • Application of fragment-based NMR screening, X-ray crystallography, Structure-based design, and focused chemical library design to identify novel microM leads for the development of nM BACE-1 (beta-site APP cleaving enzyme 1. inhibitors
    • Wang, Y.S.; Strickland, C.; Voigt, J.H.; Kennedy, M.E.; Beyer, B.M.; Senior, M.M.; Smith, E.M.; Nechuta, T.L.; Madison, V.S.; Czarniecki, M.; et al. Application of fragment-based NMR screening, X-ray crystallography, Structure-based design, and focused chemical library design to identify novel microM leads for the development of nM BACE-1 (beta-site APP cleaving enzyme 1. inhibitors. J. Med. Chem. 2010, 53, 942-950.
    • (2010) J. Med. Chem , vol.53 , pp. 942-950
    • Wang, Y.S.1    Strickland, C.2    Voigt, J.H.3    Kennedy, M.E.4    Beyer, B.M.5    Senior, M.M.6    Smith, E.M.7    Nechuta, T.L.8    Madison, V.S.9    Czarniecki, M.10
  • 26
    • 84874414338 scopus 로고    scopus 로고
    • Fragment-based lead discovery grows up
    • Baker, M. Fragment-based lead discovery grows up. Nat. Rev. Drug Discov. 2013, 12, 5-7.
    • (2013) Nat. Rev. Drug Discov , vol.12 , pp. 5-7
    • Baker, M.1
  • 27
    • 0034613320 scopus 로고    scopus 로고
    • Structure of the protease domain of memapsin 2 (beta-secretase) complexed with inhibitor
    • Hong, L.; Koelsch, G.; Lin, X.; Wu, S.; Terzyan, S.; Ghosh, A.K.; Zhang, X.C.; Tang, J. Structure of the protease domain of memapsin 2 (beta-secretase) complexed with inhibitor. Science 2000, 290. 150-153.
    • (2000) Science , vol.290 , pp. 150-153
    • Hong, L.1    Koelsch, G.2    Lin, X.3    Wu, S.4    Terzyan, S.5    Ghosh, A.K.6    Zhang, X.C.7    Tang, J.8
  • 30
    • 84868570563 scopus 로고    scopus 로고
    • Acyl guanidine inhibitors of γ-secretase (BACE-1): Optimization of a micromolar hit to a nanomolar lead via iterative solid- and solution-phase library synthesis
    • Gerritz, S.W.; Zhai, W.; Shi, S.; Zhu, S.; Toyn, J.H.; Meredith, J.E., Jr.; Iben, L.G.; Burton, C.R.; Albright, C.F.; Good, A.C.; et al. Acyl guanidine inhibitors of γ-secretase (BACE-1): optimization of a micromolar hit to a nanomolar lead via iterative solid- and solution-phase library synthesis. J. Med. Chem. 2012, 55, 9208-9223.
    • (2012) J. Med. Chem , vol.55 , pp. 9208-9223
    • Gerritz, S.W.1    Zhai, W.2    Shi, S.3    Zhu, S.4    Toyn, J.H.5    Meredith Jr., J.E.6    Iben, L.G.7    Burton, C.R.8    Albright, C.F.9    Good, A.C.10
  • 33
    • 84864397034 scopus 로고    scopus 로고
    • Benzoylbenzimidazole-based selective inhibitors targeting Cryptosporidium parvum and Toxoplasma gondii calcium-dependent protein kinase-1
    • Zhang, Z.S.; Larson, E.T.; Merritt, E.A.; Verlinde, C.L.M.J.; Fan, E.; Ojo, K.K.; He, P.Q.; Van, V.; Wesley, C.; et al. Benzoylbenzimidazole-based selective inhibitors targeting Cryptosporidium parvum and Toxoplasma gondii calcium-dependent protein kinase-1. Bioorg. Med. Chem. Lett. 2012, 22, 5264-5267.
    • (2012) Bioorg. Med. Chem. Lett , vol.22 , pp. 5264-5267
    • Zhang, Z.S.1    Larson, E.T.2    Merritt, E.A.3    Verlinde, C.L.M.J.4    Fan, E.5    Ojo, K.K.6    He, P.Q.7    Van, V.8    Wesley, C.9
  • 34
    • 76849099540 scopus 로고    scopus 로고
    • Synthesis of (±)-Bistellettadine A
    • Yu, M.; Pochapsky, S.; Snider, B.; Synthesis of (±)- Bistellettadine A. Org. Lett. 2010, 12, 828-831.
    • (2010) Org. Lett , vol.12 , pp. 828-831
    • Yu, M.1    Pochapsky, S.2    Snider, B.3
  • 35
    • 77955425117 scopus 로고    scopus 로고
    • Binding of a hemoregulatory tetrapeptide by a bis-guanidinium crown ether
    • Andreas, S.; Burkhard, K. Binding of a hemoregulatory tetrapeptide by a bis-guanidinium crown ether. Tetrahedron 2010, 66, 6019-6025.
    • (2010) Tetrahedron , vol.66 , pp. 6019-6025
    • Andreas, S.1    Burkhard, K.2
  • 36
    • 77955982811 scopus 로고    scopus 로고
    • N-Acyl-argininamides as NPY Y1 receptor antagonists: Influence of structurally diverse acyl substituents on stability and affinity
    • Stefan, W.; Max, K.; Günther, B.; Armin, B.; Burkhard, K. N-Acyl-argininamides as NPY Y1 receptor antagonists: Influence of structurally diverse acyl substituents on stability and affinity. Bioorg. Med. Chem. 2010, 18, 6292-6304.
    • (2010) Bioorg. Med. Chem , vol.18 , pp. 6292-6304
    • Stefan, W.1    Max, K.2    Günther, B.3    Armin, B.4    Burkhard, K.5
  • 37
    • 84875444966 scopus 로고    scopus 로고
    • (accessed on 10 May)
    • ZINC database. Available online: http:/zic.docking.org (accessed on 10 May 2012).
    • (2012) ZINC Database
  • 38
    • 84878292934 scopus 로고    scopus 로고
    • version 5.6. (accessed on 7 September )
    • ChemAxon Chemoinformatics Software, version 5.6. Available online: http://www.chemaxon.com/ (accessed on 7 September 2011).
    • (2011) ChemAxon Chemoinformatics Software
  • 39
    • 84878296325 scopus 로고    scopus 로고
    • version 8.0. (accessed on 1. November)
    • Schordinger Software, version 8.0. Available online: http://www. schrodinger.com/ (accessed on 1. November 2007).
    • (2007) Schordinger Software
  • 42
    • 0028103275 scopus 로고
    • The CCP4 suite: Programs for protein crystallography
    • Collaborative-Computational-Project-Number-4
    • Collaborative-Computational-Project-Number-4. The CCP4 suite: Programs for protein crystallography. Acta Crystallogr., Sect. D: Biol. Crystallogr. 1994, 50, 760-763.
    • (1994) Acta Crystallogr., Sect. D: Biol. Crystallogr , vol.50 , pp. 760-763


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.