메뉴 건너뛰기




Volumn 56, Issue 2, 2013, Pages 534-546

Discovery, synthesis, and structure-based optimization of a series of N -(tert -Butyl)-2-(N -arylamido)-2-(pyridin-3-yl) acetamides (ML188) as potent noncovalent small molecule inhibitors of the severe acute respiratory syndrome coronavirus (SARS-CoV) 3CL protease

Author keywords

[No Author keywords available]

Indexed keywords

AMIDE; ANTIVIRUS AGENT; CINANSERIN; ML 188; N [4 (TERTBUTYL)HENYL] N [2 (TERT BUTYLAMINO) 2 OXO 1 (PYRIDIN 3 YL)ETHYL]FURAN 2 CARBOXAMIDE; NONSTRUCTURAL PROTEIN 5; PROTEINASE INHIBITOR; UNCLASSIFIED DRUG;

EID: 84872775313     PISSN: 00222623     EISSN: 15204804     Source Type: Journal    
DOI: 10.1021/jm301580n     Document Type: Article
Times cited : (171)

References (60)
  • 1
    • 0002572397 scopus 로고
    • Human Coronavirus Infections
    • Siddell, S. G. Plenum Press: New York
    • Myint, S. H. In Human Coronavirus Infections. The Coronaviridae; Siddell, S. G., Ed.; Plenum Press: New York, 1995; pp 389-401.
    • (1995) The Coronaviridae , pp. 389-401
    • Myint, S.H.1
  • 5
    • 4143122124 scopus 로고    scopus 로고
    • Molecular biology of severe acute respiratory syndrome coronavirus
    • Ziebuhr, J. Molecular biology of severe acute respiratory syndrome coronavirus Curr. Opin. Microbiol. 2004, 7, 412-419
    • (2004) Curr. Opin. Microbiol. , vol.7 , pp. 412-419
    • Ziebuhr, J.1
  • 6
    • 33947376439 scopus 로고    scopus 로고
    • The novel human coronaviruses NL63 and HKU1
    • Pyrc, K.; Berkhout, B.; van der Hoek, L. The novel human coronaviruses NL63 and HKU1 J. Virol. 2007, 81, 3051-3057
    • (2007) J. Virol. , vol.81 , pp. 3051-3057
    • Pyrc, K.1    Berkhout, B.2    Van Der Hoek, L.3
  • 7
    • 79952410434 scopus 로고    scopus 로고
    • Human coronavirus NL63: A clinically important virus?
    • Fielding, B. C. Human coronavirus NL63: A clinically important virus? Future Microbiol. 2011, 6, 153-159
    • (2011) Future Microbiol. , vol.6 , pp. 153-159
    • Fielding, B.C.1
  • 10
    • 33751551251 scopus 로고    scopus 로고
    • Drug design targeting the main protease, the Achilles' heel of coronaviruses
    • Yang, H.; Bartlam, M.; Rao, Z. Drug design targeting the main protease, the Achilles' heel of coronaviruses Curr. Pharm. Des. 2006, 12, 4573-4590
    • (2006) Curr. Pharm. Des. , vol.12 , pp. 4573-4590
    • Yang, H.1    Bartlam, M.2    Rao, Z.3
  • 12
    • 9144268403 scopus 로고    scopus 로고
    • Biosynthesis, purification, and substrate specificity of severe acute respiratory syndrome coronavirus 3C-like proteinase
    • Fan, K.; Wei, P.; Feng, Q.; Chen, S.; Huang, C.; Ma, L.; Lai, B.; Pei, J.; Liu, Y.; Chen, J.; Lai, L. Biosynthesis, purification, and substrate specificity of severe acute respiratory syndrome coronavirus 3C-like proteinase J. Biol. Chem. 2004, 279, 1637-1642
    • (2004) J. Biol. Chem. , vol.279 , pp. 1637-1642
    • Fan, K.1    Wei, P.2    Feng, Q.3    Chen, S.4    Huang, C.5    Ma, L.6    Lai, B.7    Pei, J.8    Liu, Y.9    Chen, J.10    Lai, L.11
  • 13
    • 0034990084 scopus 로고    scopus 로고
    • Viral replicase gene products suffice for coronavirus discontinuous transcription
    • Thiel, V.; Herold, J.; Schelle, B.; Siddell, S. G. Viral replicase gene products suffice for coronavirus discontinuous transcription J. Virol. 2001, 75, 6676-6681
    • (2001) J. Virol. , vol.75 , pp. 6676-6681
    • Thiel, V.1    Herold, J.2    Schelle, B.3    Siddell, S.G.4
  • 16
    • 0038120984 scopus 로고    scopus 로고
    • Coronavirus main proteinase (3CLpro) structure: Basis for design of anti-SARS drugs
    • Anand, K.; Ziebuhr, J.; Wadhwani, P.; Mesters, J. R.; Hilgenfeld, R. Coronavirus main proteinase (3CLpro) structure: basis for design of anti-SARS drugs Science 2003, 300, 1763-1767
    • (2003) Science , vol.300 , pp. 1763-1767
    • Anand, K.1    Ziebuhr, J.2    Wadhwani, P.3    Mesters, J.R.4    Hilgenfeld, R.5
  • 18
    • 27944459285 scopus 로고    scopus 로고
    • Structural insights into SARS coronavirus proteins
    • Bartlam, M.; Yang, H.; Rao, Z. Structural insights into SARS coronavirus proteins Curr. Opin. Struct. Biol. 2005, 15, 664-672
    • (2005) Curr. Opin. Struct. Biol. , vol.15 , pp. 664-672
    • Bartlam, M.1    Yang, H.2    Rao, Z.3
  • 23
    • 34247274665 scopus 로고    scopus 로고
    • Design, synthesis, and evaluation of inhibitors for severe acute respiratory syndrome 3C-Like protease based on phthalhydrazide ketones or heteroaromatic esters
    • Zhang, J.; Pettersson, H. I.; Huitema, C.; Niu, C.; Yin, J.; James, M. N. G.; Eltis, L. D.; Vederas, J. C. Design, synthesis, and evaluation of inhibitors for severe acute respiratory syndrome 3C-Like protease based on phthalhydrazide ketones or heteroaromatic esters J. Med. Chem. 2007, 50, 1850-1864
    • (2007) J. Med. Chem. , vol.50 , pp. 1850-1864
    • Zhang, J.1    Pettersson, H.I.2    Huitema, C.3    Niu, C.4    Yin, J.5    James, M.N.G.6    Eltis, L.D.7    Vederas, J.C.8
  • 27
    • 33646079601 scopus 로고    scopus 로고
    • Stable benzotriazole esters as mechanism-based inactivators of the severe acute respiratory syndrome 3CL protease
    • Wu, C. Y.; King, K. Y.; Kuo, C. J.; Fang, J. M.; Wu, Y. T.; Ho, M. Y.; Liao, C. L.; Shie, J. J.; Liang, P. H.; Wong, C. H. Stable benzotriazole esters as mechanism-based inactivators of the severe acute respiratory syndrome 3CL protease Chem. Biol. 2006, 13, 261-268
    • (2006) Chem. Biol. , vol.13 , pp. 261-268
    • Wu, C.Y.1    King, K.Y.2    Kuo, C.J.3    Fang, J.M.4    Wu, Y.T.5    Ho, M.Y.6    Liao, C.L.7    Shie, J.J.8    Liang, P.H.9    Wong, C.H.10
  • 31
    • 51549115724 scopus 로고    scopus 로고
    • Aryl methylene ketones and fluorinated methylene ketones as reversible inhibitors for severe acute respiratory syndrome (SARS) 3C-like proteinase
    • Zhang, J.; Huitema, C.; Niu, C.; Yin, J.; James, M. N. G.; Eltis, L. D.; Vederas, J. C. Aryl methylene ketones and fluorinated methylene ketones as reversible inhibitors for severe acute respiratory syndrome (SARS) 3C-like proteinase Bioorg. Chem. 2008, 36, 229-240
    • (2008) Bioorg. Chem. , vol.36 , pp. 229-240
    • Zhang, J.1    Huitema, C.2    Niu, C.3    Yin, J.4    James, M.N.G.5    Eltis, L.D.6    Vederas, J.C.7
  • 32
    • 41649107991 scopus 로고    scopus 로고
    • Structure-based virtual screening against SARS-3CL(pro) to identify novel non-peptidic hits
    • Mukherjee, P.; Desai, P.; Ross, L.; White, E. L.; Avery, M. A. Structure-based virtual screening against SARS-3CL(pro) to identify novel non-peptidic hits Bioorg. Med. Chem. 2008, 7, 4138-4149
    • (2008) Bioorg. Med. Chem. , vol.7 , pp. 4138-4149
    • Mukherjee, P.1    Desai, P.2    Ross, L.3    White, E.L.4    Avery, M.A.5
  • 33
    • 79955549965 scopus 로고    scopus 로고
    • Virtual screening identification of novel severe acute respiratory syndrome 3C-like protease inhibitors and in vitro confirmation
    • Nguyen, T. T.; Ryu, H. J.; Lee, S. H.; Hwang, S.; Breton, V.; Rhee, J. H.; Kim, D. Virtual screening identification of novel severe acute respiratory syndrome 3C-like protease inhibitors and in vitro confirmation Bioorg. Med. Chem. 2011, 21, 3088-3091
    • (2011) Bioorg. Med. Chem. , vol.21 , pp. 3088-3091
    • Nguyen, T.T.1    Ryu, H.J.2    Lee, S.H.3    Hwang, S.4    Breton, V.5    Rhee, J.H.6    Kim, D.7
  • 34
    • 33947705587 scopus 로고    scopus 로고
    • Recent developments in the virology and antiviral research of severe acute respiratory syndrome coronavirus
    • Yeung, K. S.; Meanwell, N. A. Recent developments in the virology and antiviral research of severe acute respiratory syndrome coronavirus Infect. Disord.: Drug Targets 2007, 7, 29-41
    • (2007) Infect. Disord.: Drug Targets , vol.7 , pp. 29-41
    • Yeung, K.S.1    Meanwell, N.A.2
  • 35
    • 65349120140 scopus 로고    scopus 로고
    • New developments for the design, synthesis and biological evaluation of potent SARS-CoV 3CLpro inhibitors
    • Regnier, T.; Sarma, D.; Hidaka, K.; Bacha, U.; Freire, E.; Hayashi, Y.; Yoshiaki, K. New developments for the design, synthesis and biological evaluation of potent SARS-CoV 3CLpro inhibitors Bioorg. Med. Chem. Lett. 2009, 19, 2722-2727
    • (2009) Bioorg. Med. Chem. Lett. , vol.19 , pp. 2722-2727
    • Regnier, T.1    Sarma, D.2    Hidaka, K.3    Bacha, U.4    Freire, E.5    Hayashi, Y.6    Yoshiaki, K.7
  • 36
    • 84860434846 scopus 로고    scopus 로고
    • Covalent drugs form long-lived ties
    • Guterman, L. Covalent drugs form long-lived ties Chem. Eng. News 2011, 89 (No. 36) 19-26
    • (2011) Chem. Eng. News , vol.89 , Issue.36 , pp. 19-26
    • Guterman, L.1
  • 37
    • 33748308883 scopus 로고    scopus 로고
    • Targeting proteases: Successes, failures and future prospects
    • Turk, B. Targeting proteases: Successes, failures and future prospects Nat. Rev. Drug Discovery 2006, 5, 785-799
    • (2006) Nat. Rev. Drug Discovery , vol.5 , pp. 785-799
    • Turk, B.1
  • 38
    • 1942453243 scopus 로고    scopus 로고
    • Ligand efficiency: A useful metric for lead selection
    • Hopkins, A. L.; Groom, C. R.; Alex, A. Ligand efficiency: A useful metric for lead selection Drug Discovery Today 2004, 9, 430-431
    • (2004) Drug Discovery Today , vol.9 , pp. 430-431
    • Hopkins, A.L.1    Groom, C.R.2    Alex, A.3
  • 39
    • 17044403086 scopus 로고    scopus 로고
    • Ligand efficiency indices as guideposts for drug discovery
    • Abad-Zapatero, C.; Metz, J. T. Ligand efficiency indices as guideposts for drug discovery Drug Discovery Today 2005, 10, 464-469
    • (2005) Drug Discovery Today , vol.10 , pp. 464-469
    • Abad-Zapatero, C.1    Metz, J.T.2
  • 41
    • 84891731979 scopus 로고    scopus 로고
    • For information on the MLPCN and information on how to request probe compounds, such ML188, see http://mli.nih.gov/mli/mlpcn/.
  • 42
    • 77954675156 scopus 로고    scopus 로고
    • Liberation of SARS-CoV main protease from the viral polyprotein: N-terminal autocleavage does not depend on the mature dimerization mode
    • Chen, S.; Jonas, F.; Shen, C.; Hilgenfeld, R. Liberation of SARS-CoV main protease from the viral polyprotein: N-terminal autocleavage does not depend on the mature dimerization mode Protein Cell 2010, 1, 59-74
    • (2010) Protein Cell , vol.1 , pp. 59-74
    • Chen, S.1    Jonas, F.2    Shen, C.3    Hilgenfeld, R.4
  • 43
    • 79953156881 scopus 로고    scopus 로고
    • Erratum. Protein Cell 2010, 1, 307.
    • (2010) Protein Cell , vol.1 , pp. 307
  • 44
    • 40649104356 scopus 로고    scopus 로고
    • Evaluating the 3C-like protease activity of SARS-coronavirus: Recommendations for standardized assays for drug discovery
    • Grum-Tokars, V.; Ratia, K.; Begaye, A.; Baker, S. C.; Mesecar, A. D. Evaluating the 3C-like protease activity of SARS-coronavirus: Recommendations for standardized assays for drug discovery Virus Res. 2008, 133, 63-73
    • (2008) Virus Res. , vol.133 , pp. 63-73
    • Grum-Tokars, V.1    Ratia, K.2    Begaye, A.3    Baker, S.C.4    Mesecar, A.D.5
  • 46
    • 0037061628 scopus 로고    scopus 로고
    • A common mechanism underlying promiscuous inhibitors from virtual and high-throughput screening
    • McGovern, S. L.; Caselli, E.; Grigorieff, N.; Shoichet, B. K. A common mechanism underlying promiscuous inhibitors from virtual and high-throughput screening J. Med. Chem. 2002, 45, 1712-1722
    • (2002) J. Med. Chem. , vol.45 , pp. 1712-1722
    • McGovern, S.L.1    Caselli, E.2    Grigorieff, N.3    Shoichet, B.K.4
  • 47
    • 29744455503 scopus 로고    scopus 로고
    • The papain-like protease of severe acute respiratory syndrome coronavirus has deubiquitinating activity
    • Barretto, N.; Jukneliene, D.; Ratia, K.; Chen, Z.; Mesecar, A. D.; Baker, S. C. The papain-like protease of severe acute respiratory syndrome coronavirus has deubiquitinating activity J. Virol. 2005, 79, 15189-198
    • (2005) J. Virol. , vol.79 , pp. 15189-15198
    • Barretto, N.1    Jukneliene, D.2    Ratia, K.3    Chen, Z.4    Mesecar, A.D.5    Baker, S.C.6
  • 50
    • 2542509173 scopus 로고    scopus 로고
    • Multicomponent reactions with isocyanides
    • Dömling, A.; Ugi, I. I. Multicomponent reactions with isocyanides Angew. Chem., Int. Ed. 2000, 39, 3168-3210
    • (2000) Angew. Chem., Int. Ed. , vol.39 , pp. 3168-3210
    • Dömling, A.1    Ugi, I.I.2
  • 51
    • 84872807153 scopus 로고    scopus 로고
    • For information on MLPCN's probe compound ancillary screen, see Ricerca LeadProfilingScreen
    • For information on MLPCN's probe compound ancillary screen, see Ricerca LeadProfilingScreen: https://pharmacology.ricerca.com.
  • 52
    • 0031059866 scopus 로고    scopus 로고
    • Processing of X-ray Diffraction Data Collected in Oscillation Mode
    • Carter, C. W. Jr. Sweet, R. M. Methods in Enzymology; Academic Press: New York
    • Otwinowski, Z.; Minor, W. Processing of X-ray Diffraction Data Collected in Oscillation Mode. In Macromolecular Crystallography; Carter, C. W., Jr.; Sweet, R. M., Eds.; Methods in Enzymology; Academic Press: New York, 1997; p 307-326.
    • (1997) Macromolecular Crystallography , pp. 307-326
    • Otwinowski, Z.1    Minor, W.2
  • 53
    • 0028103275 scopus 로고
    • The CCP4 Suite: Programs for Protein Crystallography
    • CCP4
    • CCP4 The CCP4 Suite: Programs for Protein Crystallography Acta Crystallogr. 1994, D50, 760-763
    • (1994) Acta Crystallogr. , vol.50 , pp. 760-763
  • 54
    • 0000560808 scopus 로고    scopus 로고
    • MOLREP: An automated program for molecular replacement
    • Vagin, A.; Teplyakov, A. MOLREP: An automated program for molecular replacement. J. Appl. Crystallogr. 1997, 30, 1022-1025
    • (1997) J. Appl. Crystallogr. , vol.30 , pp. 1022-1025
    • Vagin, A.1    Teplyakov, A.2
  • 55
    • 0030924992 scopus 로고    scopus 로고
    • Refinement of macromolecular structures by the maximum-likelihood method
    • Murshudov, G. N.; Vagin, A. A.; Dodson, E. J. Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallogr. 1997, D53 (Pt 3) 240-255
    • (1997) Acta Crystallogr. , vol.53 , Issue.PART 3 , pp. 240-255
    • Murshudov, G.N.1    Vagin, A.A.2    Dodson, E.J.3
  • 56
    • 13244281317 scopus 로고    scopus 로고
    • Coot: Model-building tools for molecular graphics
    • Emsley, P.; Cowtan, K. Coot: Model-building tools for molecular graphics Acta Crystallogr. 2004, D60, 2126-2132
    • (2004) Acta Crystallogr. , vol.60 , pp. 2126-2132
    • Emsley, P.1    Cowtan, K.2
  • 57
    • 33645158291 scopus 로고    scopus 로고
    • TLSMD web server for the generation of multi-group TLS models
    • Painter, J.; Merritt, E. A. TLSMD web server for the generation of multi-group TLS models J. Appl. Crystallogr. 2006, 39, 109-111
    • (2006) J. Appl. Crystallogr. , vol.39 , pp. 109-111
    • Painter, J.1    Merritt, E.A.2
  • 58
    • 23844520061 scopus 로고    scopus 로고
    • A molecular viewer for the analysis of TLS rigid-body motion in macromolecules
    • Painter, J.; Merritt, E. A. A molecular viewer for the analysis of TLS rigid-body motion in macromolecules Acta Crystallogr. 2005, D61 (Pt 4) 465-471
    • (2005) Acta Crystallogr. , vol.61 , Issue.PART 4 , pp. 465-471
    • Painter, J.1    Merritt, E.A.2
  • 60
    • 0033954256 scopus 로고    scopus 로고
    • The Protein Data Bank
    • Berman, H. M. The Protein Data Bank Nucleic Acids Res. 2000, 28 (1) 235-242
    • (2000) Nucleic Acids Res. , vol.28 , Issue.1 , pp. 235-242
    • Berman, H.M.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.