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Volumn 19, Issue 2, 2013, Pages 257-270

Transcriptome-wide identification of A > i RNA editing sites by inosine specific cleavage

Author keywords

ADAR; Deep sequencing; Genomics; Ion channel; Noncoding RNA

Indexed keywords

GUANOSINE; INOSINE; PROTEIN P53; RIBONUCLEASE; RNA; TRANSCRIPTOME; UNTRANSLATED RNA;

EID: 84872564405     PISSN: 13558382     EISSN: 14699001     Source Type: Journal    
DOI: 10.1261/rna.036202.112     Document Type: Article
Times cited : (60)

References (99)
  • 2
    • 12344300804 scopus 로고    scopus 로고
    • Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome
    • Athanasiadis A, Rich A, Maas S. 2004. Widespread A-to-I RNA editing of Alu-containing mRNAs in the human transcriptome. PLoS Biol 2: e391.
    • (2004) PLoS Biol , vol.2
    • Athanasiadis, A.1    Rich, A.2    Maas, S.3
  • 3
    • 0035997389 scopus 로고    scopus 로고
    • RNA editing by adenosine deaminases that act on RNA
    • Bass BL. 2002. RNA editing by adenosine deaminases that act on RNA. Annu Rev Biochem 71: 817-846.
    • (2002) Annu Rev Biochem , vol.71 , pp. 817-846
    • Bass, B.L.1
  • 6
    • 4744347763 scopus 로고    scopus 로고
    • Control of human potassium channel inactivation by editing of a small mRNA hairpin
    • Bhalla T, Rosenthal JJ, Holmgren M, Reenan R. 2004. Control of human potassium channel inactivation by editing of a small mRNA hairpin. Nat Struct Mol Biol 11: 950-956.
    • (2004) Nat Struct Mol Biol , vol.11 , pp. 950-956
    • Bhalla, T.1    Rosenthal, J.J.2    Holmgren, M.3    Reenan, R.4
  • 10
    • 80055076214 scopus 로고    scopus 로고
    • Identification of widespread ultra-edited human RNAs
    • Carmi S, Borukhov I, Levanon EY. 2011. Identification of widespread ultra-edited human RNAs. PLoS Genet 7: e1002317.
    • (2011) PLoS Genet , vol.7
    • Carmi, S.1    Borukhov, I.2    Levanon, E.Y.3
  • 11
    • 47049122843 scopus 로고    scopus 로고
    • Alu element-mediated gene silencing
    • Chen LL, DeCerbo JN, Carmichael GG. 2008. Alu element-mediated gene silencing. EMBO J 27: 1694-1705.
    • (2008) EMBO J , vol.27 , pp. 1694-1705
    • Chen, L.L.1    Decerbo, J.N.2    Carmichael, G.G.3
  • 14
    • 78751534192 scopus 로고    scopus 로고
    • Adenosineto- inosine RNA editing affects trafficking of the γ-aminobutyric acid type A (GABAA) receptor
    • Daniel C, Wahlstedt H, Ohlson J, Bjork P, Ohman M. 2010. Adenosineto- inosine RNA editing affects trafficking of the γ-aminobutyric acid type A (GABAA) receptor. J Biol Chem 286: 2031-2040.
    • (2010) J Biol Chem , vol.286 , pp. 2031-2040
    • Daniel, C.1    Wahlstedt, H.2    Ohlson, J.3    Bjork, P.4    Ohman, M.5
  • 15
    • 67650727366 scopus 로고    scopus 로고
    • VARNA: Interactive drawing and editing of the RNA secondary structure
    • Darty K, Denise A, Ponty Y. 2009. VARNA: Interactive drawing and editing of the RNA secondary structure. Bioinformatics 25: 1974-1975.
    • (2009) Bioinformatics , vol.25 , pp. 1974-1975
    • Darty, K.1    Denise, A.2    Ponty, Y.3
  • 17
    • 60849139395 scopus 로고    scopus 로고
    • GOrilla: A tool for discovery and visualization of enriched GO terms in ranked gene lists
    • Eden E, Navon R, Steinfeld I, Lipson D, Yakhini Z. 2009. GOrilla: A tool for discovery and visualization of enriched GO terms in ranked gene lists. BMC Bioinformatics 10: 48.
    • (2009) BMC Bioinformatics , vol.10 , pp. 48
    • Eden, E.1    Navon, R.2    Steinfeld, I.3    Lipson, D.4    Yakhini, Z.5
  • 18
    • 79956271523 scopus 로고    scopus 로고
    • Predicting sites of ADAR editing in double-stranded RNA
    • Eggington JM, Greene T, Bass BL. 2011. Predicting sites of ADAR editing in double-stranded RNA. Nat Commun 2: 319.
    • (2011) Nat Commun , vol.2 , pp. 319
    • Eggington, J.M.1    Greene, T.2    Bass, B.L.3
  • 21
    • 62849103689 scopus 로고    scopus 로고
    • RNA-regulated interaction of transportin-1 and exportin-5 with the double-stranded RNA-binding domain regulates nucleocytoplasmic shuttling of ADAR1
    • Fritz J, Strehblow A, Taschner A, Schopoff S, Pasierbek P, Jantsch MF. 2009. RNA-regulated interaction of transportin-1 and exportin-5 with the double-stranded RNA-binding domain regulates nucleocytoplasmic shuttling of ADAR1. Mol Cell Biol 29: 1487-1497.
    • (2009) Mol Cell Biol , vol.29 , pp. 1487-1497
    • Fritz, J.1    Strehblow, A.2    Taschner, A.3    Schopoff, S.4    Pasierbek, P.5    Jantsch, M.F.6
  • 22
    • 0033551050 scopus 로고    scopus 로고
    • Human RNA-specific adenosine deaminase ADAR1 transcripts possess alternative exon 1 structures that initiate from different promoters, one constitutively active and the other interferon inducible
    • George CX, Samuel CE. 1999. Human RNA-specific adenosine deaminase ADAR1 transcripts possess alternative exon 1 structures that initiate from different promoters, one constitutively active and the other interferon inducible. Proc Natl Acad Sci 96: 4621-4626.
    • (1999) Proc Natl Acad Sci , vol.96 , pp. 4621-4626
    • George, C.X.1    Samuel, C.E.2
  • 23
    • 78649385610 scopus 로고    scopus 로고
    • Analysis of A to i editing of miRNA in macrophages exposed to Salmonella
    • Heale BS, Eulalio A, Schulte L, Vogel J, O'Connell MA. 2010. Analysis of A to I editing of miRNA in macrophages exposed to Salmonella. RNA Biol 7: 621-627.
    • (2010) RNA Biol , vol.7 , pp. 621-627
    • Heale, B.S.1    Eulalio, A.2    Schulte, L.3    Vogel, J.4    O'Connell, M.A.5
  • 24
    • 0027772363 scopus 로고
    • RNA editing of AMPA receptor subunit GluR-B: A basepaired intron-exon structure determines position and efficiency
    • Higuchi M, Single FN, Kohler M, Sommer B, Sprengel R, Seeburg PH. 1993. RNA editing of AMPA receptor subunit GluR-B: A basepaired intron-exon structure determines position and efficiency. Cell 75: 1361-1370.
    • (1993) Cell , vol.75 , pp. 1361-1370
    • Higuchi, M.1    Single, F.N.2    Kohler, M.3    Sommer, B.4    Sprengel, R.5    Seeburg, P.H.6
  • 26
    • 33646867882 scopus 로고    scopus 로고
    • Memory efficient folding algorithms for circular RNA secondary structures
    • Hofacker IL, Stadler PF. 2006. Memory efficient folding algorithms for circular RNA secondary structures. Bioinformatics 22: 1172-1176.
    • (2006) Bioinformatics , vol.22 , pp. 1172-1176
    • Hofacker, I.L.1    Stadler, P.F.2
  • 27
    • 0042528670 scopus 로고    scopus 로고
    • Nervous system targets of RNA editing identified by comparative genomics
    • Hoopengardner B, Bhalla T, Staber C, Reenan R. 2003. Nervous system targets of RNA editing identified by comparative genomics. Science 301: 832-836.
    • (2003) Science , vol.301 , pp. 832-836
    • Hoopengardner, B.1    Bhalla, T.2    Staber, C.3    Reenan, R.4
  • 30
    • 33747873838 scopus 로고    scopus 로고
    • Mathematical and biological modelling of RNA secondary structure and its effects on gene expression
    • Hughes TA, McElwaine JN. 2006. Mathematical and biological modelling of RNA secondary structure and its effects on gene expression. Comput Math Methods Med 7: 37-43.
    • (2006) Comput Math Methods Med , vol.7 , pp. 37-43
    • Hughes, T.A.1    McElwaine, J.N.2
  • 31
    • 67649130153 scopus 로고    scopus 로고
    • ADAR1 and ADAR2 expression and editing activity during forebrain development
    • Jacobs MM, Fogg RL, Emeson RB, Stanwood GD. 2009. ADAR1 and ADAR2 expression and editing activity during forebrain development. Dev Neurosci 31: 223-237.
    • (2009) Dev Neurosci , vol.31 , pp. 223-237
    • Jacobs, M.M.1    Fogg, R.L.2    Emeson, R.B.3    Stanwood, G.D.4
  • 32
    • 49649095216 scopus 로고    scopus 로고
    • RNA editing in regulating gene expression in the brain
    • Jepson JE, Reenan RA. 2008. RNA editing in regulating gene expression in the brain. Biochim Biophys Acta 1779: 459-470.
    • (2008) Biochim Biophys Acta , vol.1779 , pp. 459-470
    • Jepson, J.E.1    Reenan, R.A.2
  • 33
    • 69449108175 scopus 로고    scopus 로고
    • Origins and evolution of ADAR-mediated RNA editing
    • Jin Y, Zhang W, Li Q. 2009. Origins and evolution of ADAR-mediated RNA editing. IUBMB Life 61: 572-578.
    • (2009) IUBMB Life , vol.61 , pp. 572-578
    • Jin, Y.1    Zhang, W.2    Li, Q.3
  • 35
    • 33646000325 scopus 로고    scopus 로고
    • Extensive adenosine-to-inosine editing detected in Alu repeats of antisense RNAs reveals scarcity of senseantisense duplex formation
    • Kawahara Y, Nishikura K. 2006. Extensive adenosine-to-inosine editing detected in Alu repeats of antisense RNAs reveals scarcity of senseantisense duplex formation. FEBS Lett 580: 2301-2305.
    • (2006) FEBS Lett , vol.580 , pp. 2301-2305
    • Kawahara, Y.1    Nishikura, K.2
  • 39
    • 77954505224 scopus 로고    scopus 로고
    • DARNED: A DAtabase of RNa EDiting in humans
    • Kiran A, Baranov PV. 2010. DARNED: A DAtabase of RNa EDiting in humans. Bioinformatics 26: 1772-1776.
    • (2010) Bioinformatics , vol.26 , pp. 1772-1776
    • Kiran, A.1    Baranov, P.V.2
  • 40
    • 84863385039 scopus 로고    scopus 로고
    • Comment on "widespread RNA and DNA sequence differences in the human transcriptome"
    • author reply 1302
    • Kleinman CL, Majewski J. 2012. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome". Science 335: 1302; author reply 1302.
    • (2012) Science , vol.335 , pp. 1302
    • Kleinman, C.L.1    Majewski, J.2
  • 41
    • 0027339892 scopus 로고
    • Determinants of Ca2+ permeability in both TM1 and TM2 of high affinity kainate receptor channels: Diversity by RNA editing
    • Kohler M, Burnashev N, Sakmann B, Seeburg PH. 1993. Determinants of Ca2+ permeability in both TM1 and TM2 of high affinity kainate receptor channels: Diversity by RNA editing. Neuron 10: 491-500.
    • (1993) Neuron , vol.10 , pp. 491-500
    • Kohler, M.1    Burnashev, N.2    Sakmann, B.3    Seeburg, P.H.4
  • 43
    • 0034711082 scopus 로고    scopus 로고
    • Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities
    • Lehmann KA, Bass BL. 2000. Double-stranded RNA adenosine deaminases ADAR1 and ADAR2 have overlapping specificities. Biochemistry 39: 12875-12884.
    • (2000) Biochemistry , vol.39 , pp. 12875-12884
    • Lehmann, K.A.1    Bass, B.L.2
  • 46
    • 67649884743 scopus 로고    scopus 로고
    • Fast and accurate short read alignment with Burrows-Wheeler transform
    • Li H, Durbin R. 2009. Fast and accurate short read alignment with Burrows-Wheeler transform. Bioinformatics 25: 1754-1760.
    • (2009) Bioinformatics , vol.25 , pp. 1754-1760
    • Li, H.1    Durbin, R.2
  • 50
    • 84863385039 scopus 로고    scopus 로고
    • Comment on "widespread RNA and DNA sequence differences in the human transcriptome"
    • author reply 1302
    • LinW, Piskol R, Tan MH, Li JB. 2012. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome". Science 335: 1302; author reply 1302.
    • (2012) Science , vol.335 , pp. 1302
    • Lin, W.1    Piskol, R.2    Tan, M.H.3    Li, J.B.4
  • 51
    • 79952282523 scopus 로고    scopus 로고
    • JTV1 co-activates FBP to induce USP29 transcription and stabilize p53 in response to oxidative stress
    • Liu J, Chung HJ, Vogt M, Jin Y, Malide D, He L, Dundr M, Levens D. 2011. JTV1 co-activates FBP to induce USP29 transcription and stabilize p53 in response to oxidative stress. EMBO J 30: 846-858.
    • (2011) EMBO J , vol.30 , pp. 846-858
    • Liu, J.1    Chung, H.J.2    Vogt, M.3    Jin, Y.4    Malide, D.5    He, L.6    Dundr, M.7    Levens, D.8
  • 54
    • 15844368815 scopus 로고    scopus 로고
    • Structural requirements for RNA editing in glutamate receptor pre-mRNAs by recombinant double-stranded RNA adenosine deaminase
    • Maas S, Melcher T, Herb A, Seeburg PH, KellerW, Krause S, Higuchi M, O'Connell MA. 1996. Structural requirements for RNA editing in glutamate receptor pre-mRNAs by recombinant double-stranded RNA adenosine deaminase. J Biol Chem 271: 12221-12226.
    • (1996) J Biol Chem , vol.271 , pp. 12221-12226
    • Maas, S.1    Melcher, T.2    Herb, A.3    Seeburg, P.H.4    Kellerw Krause, S.5    Higuchi, M.6    O'Connell, M.A.7
  • 56
    • 77954849146 scopus 로고    scopus 로고
    • RNA as the substrate for epigenome-environment interactions: RNA guidance of epigenetic processes and the expansion of RNA editing in animals underpins development, phenotypic plasticity, learning, and cognition
    • Mattick JS. 2010. RNA as the substrate for epigenome-environment interactions: RNA guidance of epigenetic processes and the expansion of RNA editing in animals underpins development, phenotypic plasticity, learning, and cognition. Bioessays 32: 548-552.
    • (2010) Bioessays , vol.32 , pp. 548-552
    • Mattick, J.S.1
  • 57
    • 43049105810 scopus 로고    scopus 로고
    • RNA editing, DNA recoding and the evolution of human cognition
    • Mattick JS, Mehler MF. 2008. RNA editing, DNA recoding and the evolution of human cognition. Trends Neurosci 31: 227-233.
    • (2008) Trends Neurosci , vol.31 , pp. 227-233
    • Mattick, J.S.1    Mehler, M.F.2
  • 60
    • 79953776340 scopus 로고    scopus 로고
    • GNL3 L depletion destabilizes MDM2 and induces p53-dependent G2/M arrest
    • Meng L, Hsu JK, Tsai RY. 2011. GNL3 L depletion destabilizes MDM2 and induces p53-dependent G2/M arrest. Oncogene 30: 1716-1726.
    • (2011) Oncogene , vol.30 , pp. 1716-1726
    • Meng, L.1    Hsu, J.K.2    Tsai, R.Y.3
  • 62
    • 0346455771 scopus 로고    scopus 로고
    • The MDM2-p53 interaction
    • Moll UM, Petrenko O. 2003. The MDM2-p53 interaction. Mol Cancer Res 1: 1001-1008.
    • (2003) Mol Cancer Res , vol.1 , pp. 1001-1008
    • Moll, U.M.1    Petrenko, O.2
  • 63
    • 3142735346 scopus 로고    scopus 로고
    • Identification of substrates for adenosine deaminases that act on RNA
    • Morse DP. 2004. Identification of substrates for adenosine deaminases that act on RNA. Methods Mol Biol 265: 199-218.
    • (2004) Methods Mol Biol , vol.265 , pp. 199-218
    • Morse, D.P.1
  • 64
    • 0030738705 scopus 로고    scopus 로고
    • Detection of inosine in messenger RNA by inosine-specific cleavage
    • Morse DP, Bass BL. 1997. Detection of inosine in messenger RNA by inosine-specific cleavage. Biochemistry 36: 8429-8434.
    • (1997) Biochemistry , vol.36 , pp. 8429-8434
    • Morse, D.P.1    Bass, B.L.2
  • 65
    • 0037062438 scopus 로고    scopus 로고
    • RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA
    • Morse DP, Aruscavage PJ, Bass BL. 2002. RNA hairpins in noncoding regions of human brain and Caenorhabditis elegans mRNA are edited by adenosine deaminases that act on RNA. Proc Natl Acad Sci 99: 7906-7911.
    • (2002) Proc Natl Acad Sci , vol.99 , pp. 7906-7911
    • Morse, D.P.1    Aruscavage, P.J.2    Bass, B.L.3
  • 66
    • 33749256772 scopus 로고    scopus 로고
    • RNA editing level in the mouse is determined by the genomic repeat repertoire
    • Neeman Y, Levanon EY, Jantsch MF, Eisenberg E. 2006. RNA editing level in the mouse is determined by the genomic repeat repertoire. RNA 12: 1802-1809.
    • (2006) RNA , vol.12 , pp. 1802-1809
    • Neeman, Y.1    Levanon, E.Y.2    Jantsch, M.F.3    Eisenberg, E.4
  • 67
    • 77952293063 scopus 로고    scopus 로고
    • Functions and regulation of RNA editing by ADAR deaminases
    • Nishikura K. 2010. Functions and regulation of RNA editing by ADAR deaminases. Annu Rev Biochem 79: 321-349.
    • (2010) Annu Rev Biochem , vol.79 , pp. 321-349
    • Nishikura, K.1
  • 68
    • 0033515573 scopus 로고    scopus 로고
    • RNA editing of the human serotonin 5-hydroxytryptamine 2C receptor silences constitutive activity
    • Niswender CM, Copeland SC, Herrick-Davis K, Emeson RB, Sanders- Bush E. 1999. RNA editing of the human serotonin 5-hydroxytryptamine 2C receptor silences constitutive activity. J Biol Chem 274: 9472-9478.
    • (1999) J Biol Chem , vol.274 , pp. 9472-9478
    • Niswender, C.M.1    Copeland, S.C.2    Herrick-Davis, K.3    Emeson, R.B.4    Sanders- Bush, E.5
  • 69
    • 34548575784 scopus 로고    scopus 로고
    • A method for finding sites of selective adenosine deamination
    • Ohlson J, Ohman M. 2007. A method for finding sites of selective adenosine deamination. Methods Enzymol 424: 289-300.
    • (2007) Methods Enzymol , vol.424 , pp. 289-300
    • Ohlson, J.1    Ohman, M.2
  • 70
    • 28544447032 scopus 로고    scopus 로고
    • A method to find tissue-specific novel sites of selective adenosine deamination
    • Ohlson J, Enstero M, Sjoberg BM, Ohman M. 2005. A method to find tissue-specific novel sites of selective adenosine deamination. Nucleic Acids Res 33: e167.
    • (2005) Nucleic Acids Res , vol.33
    • Ohlson, J.1    Enstero, M.2    Sjoberg, B.M.3    Ohman, M.4
  • 71
    • 34247372269 scopus 로고    scopus 로고
    • Editing modifies the GABAA receptor subunit α3
    • Ohlson J, Pedersen JS, Haussler D, Ohman M. 2007. Editing modifies the GABAA receptor subunit α3. RNA 13: 698-703.
    • (2007) RNA , vol.13 , pp. 698-703
    • Ohlson, J.1    Pedersen, J.S.2    Haussler, D.3    Ohman, M.4
  • 72
    • 69049093856 scopus 로고    scopus 로고
    • Widespread cleavage of A-to-I hyperediting substrates
    • Osenberg S, Dominissini D, Rechavi G, Eisenberg E. 2009. Widespread cleavage of A-to-I hyperediting substrates. RNA 15: 1632-1639.
    • (2009) RNA , vol.15 , pp. 1632-1639
    • Osenberg, S.1    Dominissini, D.2    Rechavi, G.3    Eisenberg, E.4
  • 75
    • 0032803363 scopus 로고    scopus 로고
    • Patterns of developmental expression of the RNA editing enzyme rADAR2
    • Paupard MC, O'Connell MA, Gerber AP, Zukin RS. 2000. Patterns of developmental expression of the RNA editing enzyme rADAR2. Neuroscience 95: 869-879.
    • (2000) Neuroscience , vol.95 , pp. 869-879
    • Paupard, M.C.1    O'Connell, M.A.2    Gerber, A.P.3    Zukin, R.S.4
  • 77
    • 84863385039 scopus 로고    scopus 로고
    • Comment on "widespread RNA and DNA sequence differences in the human transcriptome"
    • author reply 1302
    • Pickrell JK, Gilad Y, Pritchard JK. 2012. Comment on "Widespread RNA and DNA sequence differences in the human transcriptome". Science 335: 1302; author reply 1302.
    • (2012) Science , vol.335 , pp. 1302
    • Pickrell, J.K.1    Gilad, Y.2    Pritchard, J.K.3
  • 79
    • 13444306641 scopus 로고    scopus 로고
    • NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins
    • Pruitt KD, Tatusova T, Maglott DR. 2005. NCBI Reference Sequence (RefSeq): A curated non-redundant sequence database of genomes, transcripts and proteins. Nucleic Acids Res 33: D501-D504.
    • (2005) Nucleic Acids Res , vol.33
    • Pruitt, K.D.1    Tatusova, T.2    Maglott, D.R.3
  • 80
    • 77951770756 scopus 로고    scopus 로고
    • BEDTools: A flexible suite of utilities for comparing genomic features
    • Quinlan AR, Hall IM. 2010. BEDTools: A flexible suite of utilities for comparing genomic features. Bioinformatics 26: 841-842.
    • (2010) Bioinformatics , vol.26 , pp. 841-842
    • Quinlan, A.R.1    Hall, I.M.2
  • 81
    • 44149094073 scopus 로고    scopus 로고
    • Specificity of ADAR-mediated RNA editing in newly identified targets
    • Riedmann EM, Schopoff S, Hartner JC, Jantsch MF. 2008. Specificity of ADAR-mediated RNA editing in newly identified targets. RNA 14: 1110-1118.
    • (2008) RNA , vol.14 , pp. 1110-1118
    • Riedmann, E.M.1    Schopoff, S.2    Hartner, J.C.3    Jantsch, M.F.4
  • 82
    • 0033529064 scopus 로고    scopus 로고
    • Regulation of alternative splicing by RNA editing
    • Rueter SM, Dawson TR, Emeson RB. 1999. Regulation of alternative splicing by RNA editing. Nature 399: 75-80.
    • (1999) Nature , vol.399 , pp. 75-80
    • Rueter, S.M.1    Dawson, T.R.2    Emeson, R.B.3
  • 83
    • 84872550824 scopus 로고    scopus 로고
    • Biochemical identification of A-to-I RNA editing sites by the inosine chemical erasing (ICE) method
    • Sakurai M, Suzuki T. 2011. Biochemical identification of A-to-I RNA editing sites by the inosine chemical erasing (ICE) method. Methods Mol Biol 718: 89-99.
    • (2011) Methods Mol Biol , vol.718 , pp. 89-99
    • Sakurai, M.1    Suzuki, T.2
  • 84
    • 77956897387 scopus 로고    scopus 로고
    • Inosine cyanoethylation identifies A-to-I RNA editing sites in the human transcriptome
    • Sakurai M, Yano T, Kawabata H, Ueda H, Suzuki T. 2010. Inosine cyanoethylation identifies A-to-I RNA editing sites in the human transcriptome. Nat Chem Biol 6: 733-740.
    • (2010) Nat Chem Biol , vol.6 , pp. 733-740
    • Sakurai, M.1    Yano, T.2    Kawabata, H.3    Ueda, H.4    Suzuki, T.5
  • 85
    • 0345133268 scopus 로고    scopus 로고
    • Modulation of RNA editing by functional nucleolar sequestration of ADAR2
    • Sansam CL,Wells KS, Emeson RB. 2003. Modulation of RNA editing by functional nucleolar sequestration of ADAR2. Proc Natl Acad Sci 100: 14018-14023.
    • (2003) Proc Natl Acad Sci , vol.100 , pp. 14018-14023
    • Sansam Clwells, K.S.1    Emeson, R.B.2
  • 86
    • 80053980948 scopus 로고    scopus 로고
    • Very few RNA and DNA sequence differences in the human transcriptome
    • Schrider DR, Gout JF, Hahn MW. 2012. Very few RNA and DNA sequence differences in the human transcriptome. PLoS One 6: e25842.
    • (2012) PLoS One , vol.6
    • Schrider, D.R.1    Gout, J.F.2    Hahn, M.W.3
  • 90
    • 0025995296 scopus 로고
    • RNA editing in brain controls a determinant of ion flow in glutamate-gated channels
    • Sommer B, Kohler M, Sprengel R, Seeburg PH. 1991. RNA editing in brain controls a determinant of ion flow in glutamate-gated channels. Cell 67: 11-19.
    • (1991) Cell , vol.67 , pp. 11-19
    • Sommer, B.1    Kohler, M.2    Sprengel, R.3    Seeburg, P.H.4
  • 91
    • 0036856310 scopus 로고    scopus 로고
    • Nucleocytoplasmic distribution of human RNA-editing enzyme ADAR1 is modulated by double-stranded RNA-binding domains, a leucine-rich export signal, and a putative dimerization domain
    • Strehblow A, Hallegger M, Jantsch MF. 2002. Nucleocytoplasmic distribution of human RNA-editing enzyme ADAR1 is modulated by double-stranded RNA-binding domains, a leucine-rich export signal, and a putative dimerization domain. Mol Biol Cell 13: 3822-3835.
    • (2002) Mol Biol Cell , vol.13 , pp. 3822-3835
    • Strehblow, A.1    Hallegger, M.2    Jantsch, M.F.3
  • 92
    • 65449136284 scopus 로고    scopus 로고
    • TopHat: Discovering splice junctions with RNA-Seq
    • Trapnell C, Pachter L, Salzberg SL. 2009. TopHat: Discovering splice junctions with RNA-Seq. Bioinformatics 25: 1105-1111.
    • (2009) Bioinformatics , vol.25 , pp. 1105-1111
    • Trapnell, C.1    Pachter, L.2    Salzberg, S.L.3
  • 94
    • 84869864633 scopus 로고    scopus 로고
    • A method to identify RNA A-to-I editing targets using I-specific cleavage and exon array analysis
    • Tseng C, Chang H, Stocker J, Wang H, Lu C, Wu C, Yang J, Cho C, Huang H. 2013. A method to identify RNA A-to-I editing targets using I-specific cleavage and exon array analysis. Mol Cell Probes 27: 38-45.
    • (2013) Mol Cell Probes , vol.27 , pp. 38-45
    • Tseng, C.1    Chang, H.2    Stocker, J.3    Wang, H.4    Lu, C.5    Wu, C.6    Yang, J.7    Cho, C.8    Huang, H.9
  • 95
    • 23944466443 scopus 로고    scopus 로고
    • ADAR gene family and A-to-I RNA editing: Diverse roles in posttranscriptional gene regulation
    • Valente L, Nishikura K. 2005. ADAR gene family and A-to-I RNA editing: Diverse roles in posttranscriptional gene regulation. Prog Nucleic Acid Res Mol Biol 79: 299-338.
    • (2005) Prog Nucleic Acid Res Mol Biol , vol.79 , pp. 299-338
    • Valente, L.1    Nishikura, K.2
  • 97
    • 0034535312 scopus 로고    scopus 로고
    • Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis
    • Wang Q, Khillan J, Gadue P, Nishikura K. 2000. Requirement of the RNA editing deaminase ADAR1 gene for embryonic erythropoiesis. Science 290: 1765-1768.
    • (2000) Science , vol.290 , pp. 1765-1768
    • Wang, Q.1    Khillan, J.2    Gadue, P.3    Nishikura, K.4
  • 98
    • 4243364848 scopus 로고
    • On the mechanism of action of Takadiastase ribonuclease T1
    • Whitfeld PR, Witzel H. 1963. On the mechanism of action of Takadiastase ribonuclease T1. Biochim Biophys Acta 72: 338-341.
    • (1963) Biochim Biophys Acta , vol.72 , pp. 338-341
    • Whitfeld, P.R.1    Witzel, H.2
  • 99
    • 0030894825 scopus 로고    scopus 로고
    • Purification and characterization of a human RNA adenosine deaminase for glutamate receptor B pre-mRNA editing
    • Yang JH, Sklar P, Axel R, Maniatis T. 1997. Purification and characterization of a human RNA adenosine deaminase for glutamate receptor B pre-mRNA editing. Proc Natl Acad Sci 94: 4354-4359.
    • (1997) Proc Natl Acad Sci , vol.94 , pp. 4354-4359
    • Yang, J.H.1    Sklar, P.2    Axel, R.3    Maniatis, T.4


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