The UCSC table browser data retrieval tool

Nucleic Acids Research

Volumn 32, Issue DATABASE ISS., 2004, Pages

  Karolchik, Donna ^a   Hinricks, Angela S ^a   Furey, Terrence S ^a   Roskin, Krishna M ^a   Sugnet, Charles W ^a   Haussler, David ^a   Kent, W James ^a  

^a University of California Santa Cruz   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

ACCESS TO INFORMATION; ARTICLE; BIOINFORMATICS; EXPRESSED SEQUENCE TAG; GENE SEQUENCE; GENE STRUCTURE; GENETIC DATABASE; GENOME; HUMAN; INFORMATION PROCESSING; INFORMATION RETRIEVAL; INFORMATION SYSTEM; PRIORITY JOURNAL; X CHROMOSOME;

ANIMALS; COMPUTATIONAL BIOLOGY; DATABASES, GENETIC; GENOME; GENOMICS; HUMANS; INFORMATION STORAGE AND RETRIEVAL; INTERNET; SOFTWARE; USER-COMPUTER INTERFACE;

EID: 0347755531     PISSN: 03051048     EISSN: None     Source Type: Journal    
DOI: None     Document Type: Article

References (9)

1. Karolchik,D., Baertsch,R., Diekhans,M., Furey,T.S., Hinrichs,A., Lu,Y.T., Roskin,K.M., Schwartz,M., Sugnet,C.W., Thomas,D.J. et al. (2003) The UCSC Genome Browser Database. Nucleic Acids Res., 31, 51-54.
2. Thomas,J.W., Touchman,J.W., Blakesley,R.W., Bouffard,G.G., Beckstrom-Sternberg,S.M., Margulies,E.H., Blanchette,M., Siepel,A.C., Thomas,P.J., McDowell,J.C. et al. (2003) Comparative analyses of multi-species sequences from targeted genomic regions. Nature, 424, 788-793.
3. Waterston,R.H., Lindblad-Toh,K., Birney,E., Rogers,J., Abril,J.F., Agarwal,P., Agarwala,R., Ainscough,R., Alexandersson,M., An,P. et al. (2002) Initial sequencing and comparative analysis of the mouse genome. Nature, 420, 520-562.
4. Hardison,R., Roskin,K.M., Yang,S., Diekhans,M., Kent,W.J., Weber,R., Elnitski,L., Li,J., O'Connor,M., Kolbe.D. et al. (2003) Covariation in frequencies of substitution, deletion, transposition and recombination during eutherian evolution. Genome Res., 13, 13-26.
5. Siepel,A. and Haussler,D. (2003) Combining phylogenetic and Hidden Markov Models in biosequence analysis. Proceedings of the Seventh Annual International Conference on Research in Computational Molecular Biology (RECOMB 2003), pp. 277-286.
6. Kent,W.J., Baertsch,R., Hinrichs,A., Miller,W. and Haussler,D. (2003) Evolution's cauldron: duplication, deletion and rearrangement in the mouse and human genomes. Proc. Natl Acad. Sci. USA, 100, 11484-11489.
7. Schwartz,S., Kent,W.J., Smit,A., Zhang,Z., Baertsch,R., Hardison,R., Haussler,D. and Miller,W. (2003) Human-mouse alignments with BLASTZ. Genome Res., 13, 103-107.
8. Chiaromonte,F., Yap,V.B. and Miller,W. (2002) Scoring pairwise genomic sequence alignments. Pac. Symp. Biocomput., 2002, 115-126.
9. Kent,W.J., Sugnet,C.W., Furey,T.S., Roskin,K.M., Pringle,T.H., Zahler,A.M. and Haussler,D. (2002) The Human Genome Browser at UCSC. Genome Res., 12, 996-1006.