-
1
-
-
17744373329
-
Genetics of Crohn disease, an archetypal inflammatory barrier disease.
-
Schreiber S, Rosenstiel P, Albrecht M, Hampe J, Krawczak M. Genetics of Crohn disease, an archetypal inflammatory barrier disease. Nat Rev Genet 2005, 6:376-388.
-
(2005)
Nat Rev Genet
, vol.6
, pp. 376-388
-
-
Schreiber, S.1
Rosenstiel, P.2
Albrecht, M.3
Hampe, J.4
Krawczak, M.5
-
2
-
-
79551609989
-
Genome-wide association studies: results from the first few years and potential implications for clinical medicine.
-
Hirschhorn JN, Gajdos ZK. Genome-wide association studies: results from the first few years and potential implications for clinical medicine. Annu Rev Med 2011, 62:11-24.
-
(2011)
Annu Rev Med
, vol.62
, pp. 11-24
-
-
Hirschhorn, J.N.1
Gajdos, Z.K.2
-
3
-
-
80053474802
-
Mapping rare and common causal alleles for complex human diseases.
-
Raychaudhuri S. Mapping rare and common causal alleles for complex human diseases. Cell 2011, 147: 57-69.
-
(2011)
Cell
, vol.147
, pp. 57-69
-
-
Raychaudhuri, S.1
-
4
-
-
62549085618
-
Human genetic variation and its contribution to complex traits.
-
Frazer KA, Murray SS, Schork NJ, Topol EJ. Human genetic variation and its contribution to complex traits. Nat Rev Genet 2009, 10:241-251.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 241-251
-
-
Frazer, K.A.1
Murray, S.S.2
Schork, N.J.3
Topol, E.J.4
-
5
-
-
67651108806
-
The genetics of quantitative traits: challenges and prospects.
-
Mackay TF, Stone EA, Ayroles JF. The genetics of quantitative traits: challenges and prospects. Nat Rev Genet 2009, 10:565-577.
-
(2009)
Nat Rev Genet
, vol.10
, pp. 565-577
-
-
Mackay, T.F.1
Stone, E.A.2
Ayroles, J.F.3
-
6
-
-
77953808473
-
Next-generation genomics: an integrative approach.
-
Hawkins RD, Hon GC, Ren B. Next-generation genomics: an integrative approach. Nat Rev Genet 2010, 11:476-486.
-
(2010)
Nat Rev Genet
, vol.11
, pp. 476-486
-
-
Hawkins, R.D.1
Hon, G.C.2
Ren, B.3
-
7
-
-
55049111426
-
Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility.
-
Franke A, Balschun T, Karlsen TH, Sventoraityte J, Nikolaus S, Mayr G, Domingues FS, Albrecht M, Nothnagel M, Ellinghaus D, et al. Sequence variants in IL10, ARPC2 and multiple other loci contribute to ulcerative colitis susceptibility. Nat Genet 2008, 40:1319-1323.
-
(2008)
Nat Genet
, vol.40
, pp. 1319-1323
-
-
Franke, A.1
Balschun, T.2
Karlsen, T.H.3
Sventoraityte, J.4
Nikolaus, S.5
Mayr, G.6
Domingues, F.S.7
Albrecht, M.8
Nothnagel, M.9
Ellinghaus, D.10
-
8
-
-
77954407332
-
Genomewide association studies and assessment of the risk of disease.
-
Manolio TA. Genomewide association studies and assessment of the risk of disease. N Engl J Med 2010, 363:166-176.
-
(2010)
N Engl J Med
, vol.363
, pp. 166-176
-
-
Manolio, T.A.1
-
9
-
-
45549089565
-
The art and design of genetic screens: RNA interference.
-
Boutros M, Ahringer J. The art and design of genetic screens: RNA interference. Nat Rev Genet 2008, 9:554-566.
-
(2008)
Nat Rev Genet
, vol.9
, pp. 554-566
-
-
Boutros, M.1
Ahringer, J.2
-
10
-
-
78751512667
-
Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment.
-
Reiss S, Rebhan I, Backes P, Romero-Brey I, Erfle H, Matula P, Kaderali L, Poenisch M, Blankenburg H, Hiet MS, et al. Recruitment and activation of a lipid kinase by hepatitis C virus NS5A is essential for integrity of the membranous replication compartment. Cell Host Microbe 2011, 9:32-45.
-
(2011)
Cell Host Microbe
, vol.9
, pp. 32-45
-
-
Reiss, S.1
Rebhan, I.2
Backes, P.3
Romero-Brey, I.4
Erfle, H.5
Matula, P.6
Kaderali, L.7
Poenisch, M.8
Blankenburg, H.9
Hiet, M.S.10
-
11
-
-
70349564418
-
Translational disease interpretation with molecular networks.
-
Baudot A, Gómez-López G, Valencia A. Translational disease interpretation with molecular networks. Genome Biol 2009, 10:221.
-
(2009)
Genome Biol
, vol.10
, pp. 221
-
-
Baudot, A.1
Gómez-López, G.2
Valencia, A.3
-
12
-
-
77950351474
-
Advances in translational bioinformatics: computational approaches for the hunting of disease genes.
-
Kann MG. Advances in translational bioinformatics: computational approaches for the hunting of disease genes. Brief Bioinform 2009, 11:96-110.
-
(2009)
Brief Bioinform
, vol.11
, pp. 96-110
-
-
Kann, M.G.1
-
14
-
-
79551643743
-
A guide to web tools to prioritize candidate genes.
-
Tranchevent LC, Capdevila FB, Nitsch D, De Moor B, De Causmaecker P, Moreau Y. A guide to web tools to prioritize candidate genes. Brief Bioinform 2011, 12:22-32.
-
(2011)
Brief Bioinform
, vol.12
, pp. 22-32
-
-
Tranchevent, L.C.1
Capdevila, F.B.2
Nitsch, D.3
De Moor, B.4
De Causmaecker, P.5
Moreau, Y.6
-
15
-
-
78650373804
-
Network medicine: a network-based approach to human disease.
-
Barabási AL, Gulbahce N, Loscalzo J. Network medicine: a network-based approach to human disease. Nat Rev Genet 2011, 12:56-68.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 56-68
-
-
Barabási, A.L.1
Gulbahce, N.2
Loscalzo, J.3
-
16
-
-
79952674000
-
Interactome networks and human disease.
-
Vidal M, Cusick ME, Barabási AL. Interactome networks and human disease. Cell 2011, 144:986-998.
-
(2011)
Cell
, vol.144
, pp. 986-998
-
-
Vidal, M.1
Cusick, M.E.2
Barabási, A.L.3
-
18
-
-
80054991882
-
Network-based methods for human disease gene prediction.
-
Wang X, Gulbahce N, Yu H. Network-based methods for human disease gene prediction. Brief Funct Genomics 2011, 10:280-293.
-
(2011)
Brief Funct Genomics
, vol.10
, pp. 280-293
-
-
Wang, X.1
Gulbahce, N.2
Yu, H.3
-
19
-
-
84857658973
-
Computational approaches to disease-gene prediction: rationale, classification and successes.
-
Piro RM, Di Cunto F. Computational approaches to disease-gene prediction: rationale, classification and successes. FEBS J 2012, 279:678-696.
-
(2012)
FEBS J
, vol.279
, pp. 678-696
-
-
Piro, R.M.1
Di Cunto, F.2
-
20
-
-
0036649742
-
Association of genes to genetically inherited diseases using data mining.
-
Perez-Iratxeta C, Bork P, Andrade MA. Association of genes to genetically inherited diseases using data mining. Nat Genet 2002, 31:316-319.
-
(2002)
Nat Genet
, vol.31
, pp. 316-319
-
-
Perez-Iratxeta, C.1
Bork, P.2
Andrade, M.A.3
-
21
-
-
0037580196
-
A similarity-based method for genome-wide prediction of disease-relevant human genes.
-
Freudenberg J, Propping P. A similarity-based method for genome-wide prediction of disease-relevant human genes. Bioinformatics 2002, 18:S110-S115.
-
(2002)
Bioinformatics
, vol.18
-
-
Freudenberg, J.1
Propping, P.2
-
22
-
-
1542787787
-
POCUS: mining genomic sequence annotation to predict disease genes.
-
Turner FS, Clutterbuck DR, Semple CAM. POCUS: mining genomic sequence annotation to predict disease genes. Genome Biol 2003, 4:R75.
-
(2003)
Genome Biol
, vol.4
-
-
Turner, F.S.1
Clutterbuck, D.R.2
Semple, C.A.M.3
-
23
-
-
33645104470
-
SUSPECTS: enabling fast and effective prioritization of positional candidates.
-
Adie EA, Adams RR, Evans KL, Porteous DJ, Pickard BS. SUSPECTS: enabling fast and effective prioritization of positional candidates. Bioinformatics 2006, 22:773-774.
-
(2006)
Bioinformatics
, vol.22
, pp. 773-774
-
-
Adie, E.A.1
Adams, R.R.2
Evans, K.L.3
Porteous, D.J.4
Pickard, B.S.5
-
24
-
-
33646884801
-
Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes.
-
Franke L, Van Bakel H, Fokkens L, De Jong ED, Egmont-Petersen M, Wijmenga C. Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes. Am J Hum Genet 2006, 78:1011-1025.
-
(2006)
Am J Hum Genet
, vol.78
, pp. 1011-1025
-
-
Franke, L.1
Van Bakel, H.2
Fokkens, L.3
De Jong, E.D.4
Egmont-Petersen, M.5
Wijmenga, C.6
-
25
-
-
59649111554
-
Identification of candidate disease genes by integrating Gene Ontologies and protein-interaction networks: case study of primary immunodeficiencies.
-
Ortutay C, Vihinen M. Identification of candidate disease genes by integrating Gene Ontologies and protein-interaction networks: case study of primary immunodeficiencies. Nucleic Acids Res 2009, 37:622-628.
-
(2009)
Nucleic Acids Res
, vol.37
, pp. 622-628
-
-
Ortutay, C.1
Vihinen, M.2
-
26
-
-
77956497662
-
Improving disease gene prioritization using the semantic similarity of Gene Ontology terms.
-
Schlicker A, Lengauer T, Albrecht M. Improving disease gene prioritization using the semantic similarity of Gene Ontology terms. Bioinformatics 2010, 26:i561-i567.
-
(2010)
Bioinformatics
, vol.26
-
-
Schlicker, A.1
Lengauer, T.2
Albrecht, M.3
-
27
-
-
84856098655
-
Novel search method for the discovery of functional relationships.
-
Ramírez F, Lawyer G, Albrecht M. Novel search method for the discovery of functional relationships. Bioinformatics 2011, 28:269-276.
-
(2011)
Bioinformatics
, vol.28
, pp. 269-276
-
-
Ramírez, F.1
Lawyer, G.2
Albrecht, M.3
-
28
-
-
36349010138
-
Protein interactions and disease: computational approaches to uncover the etiology of diseases.
-
Kann MG. Protein interactions and disease: computational approaches to uncover the etiology of diseases. Brief Bioinform 2007, 8:333-346.
-
(2007)
Brief Bioinform
, vol.8
, pp. 333-346
-
-
Kann, M.G.1
-
29
-
-
41649119247
-
Protein networks in disease.
-
Ideker T, Sharan R. Protein networks in disease. Genome Res 2008, 18:644-652.
-
(2008)
Genome Res
, vol.18
, pp. 644-652
-
-
Ideker, T.1
Sharan, R.2
-
30
-
-
34547140875
-
The human disease network.
-
Goh KI, Cusick ME, Valle D, Childs B, Vidal M, Barabási AL. The human disease network. Proc Natl Acad Sci USA 2007, 104:8685-8690.
-
(2007)
Proc Natl Acad Sci USA
, vol.104
, pp. 8685-8690
-
-
Goh, K.I.1
Cusick, M.E.2
Valle, D.3
Childs, B.4
Vidal, M.5
Barabási, A.L.6
-
31
-
-
6344229209
-
Molecular triangulation: bridging linkage and molecular-network information for identifying candidate genes in Alzheimer's disease.
-
Krauthammer M, Kaufmann CA, Gilliam TC, Rzhetsky A. Molecular triangulation: bridging linkage and molecular-network information for identifying candidate genes in Alzheimer's disease. Proc Natl Acad Sci USA 2004, 101:15148-15153.
-
(2004)
Proc Natl Acad Sci USA
, vol.101
, pp. 15148-15153
-
-
Krauthammer, M.1
Kaufmann, C.A.2
Gilliam, T.C.3
Rzhetsky, A.4
-
32
-
-
59649125020
-
A network-based method for predicting disease-causing genes.
-
Karni S, Soreq H, Sharan R. A network-based method for predicting disease-causing genes. J Comput Biol 2009, 16:181-189.
-
(2009)
J Comput Biol
, vol.16
, pp. 181-189
-
-
Karni, S.1
Soreq, H.2
Sharan, R.3
-
33
-
-
33747035889
-
Predicting disease genes using protein-protein interactions.
-
Oti M, Snel B, Huynen MA, Brunner HG. Predicting disease genes using protein-protein interactions. J Med Genet 2006, 43:691-698.
-
(2006)
J Med Genet
, vol.43
, pp. 691-698
-
-
Oti, M.1
Snel, B.2
Huynen, M.A.3
Brunner, H.G.4
-
34
-
-
33751017706
-
Discovering disease-genes by topological features in human protein-protein interaction network.
-
Xu J, Li Y. Discovering disease-genes by topological features in human protein-protein interaction network. Bioinformatics 2006, 22:2800-2805.
-
(2006)
Bioinformatics
, vol.22
, pp. 2800-2805
-
-
Xu, J.1
Li, Y.2
-
35
-
-
33947095027
-
A human phenome-interactome network of protein complexes implicated in genetic disorders.
-
Lage K, Karlberg EO, Størling ZM, Olason PI, Pedersen AG, Rigina O, Hinsby AM, Tümer Z, Pociot F, Tommerup N, et al. A human phenome-interactome network of protein complexes implicated in genetic disorders. Nat Biotechnol 2007, 25:309-316.
-
(2007)
Nat Biotechnol
, vol.25
, pp. 309-316
-
-
Lage, K.1
Karlberg, E.O.2
Størling, Z.M.3
Olason, P.I.4
Pedersen, A.G.5
Rigina, O.6
Hinsby, A.M.7
Tümer, Z.8
Pociot, F.9
Tommerup, N.10
-
36
-
-
61649128222
-
Combining the interactome and deleterious SNP predictions to improve disease gene identification.
-
Care MA, Bradford JR, Needham CJ, Bulpitt AJ, Westhead DR. Combining the interactome and deleterious SNP predictions to improve disease gene identification. Hum Mutat 2009, 30:485-492.
-
(2009)
Hum Mutat
, vol.30
, pp. 485-492
-
-
Care, M.A.1
Bradford, J.R.2
Needham, C.J.3
Bulpitt, A.J.4
Westhead, D.R.5
-
37
-
-
80053074286
-
Huntingtin-interacting protein 14 is a type 1 diabetes candidate protein regulating insulin secretion and beta-cell apoptosis.
-
Berchtold LA, Størling ZM, Ortis F, Lage K, Bang-Berthelsen C, Bergholdt R, Hald J, Brorsson CA, Eizirik DL, Pociot F, et al. Huntingtin-interacting protein 14 is a type 1 diabetes candidate protein regulating insulin secretion and beta-cell apoptosis. Proc Natl Acad Sci USA 2011, 108:E681-E688.
-
(2011)
Proc Natl Acad Sci USA
, vol.108
-
-
Berchtold, L.A.1
Størling, Z.M.2
Ortis, F.3
Lage, K.4
Bang-Berthelsen, C.5
Bergholdt, R.6
Hald, J.7
Brorsson, C.A.8
Eizirik, D.L.9
Pociot, F.10
-
38
-
-
35349024501
-
Network modeling links breast cancer susceptibility and centrosome dysfunction.
-
Pujana MA, Han JD, Starita LM, Stevens KN, Tewari M, Ahn JS, Rennert G, Moreno V, Kirchhoff T, Gold B, et al. Network modeling links breast cancer susceptibility and centrosome dysfunction. Nat Genet 2007, 39:1338-1349.
-
(2007)
Nat Genet
, vol.39
, pp. 1338-1349
-
-
Pujana, M.A.1
Han, J.D.2
Starita, L.M.3
Stevens, K.N.4
Tewari, M.5
Ahn, J.S.6
Rennert, G.7
Moreno, V.8
Kirchhoff, T.9
Gold, B.10
-
39
-
-
77649311266
-
Predicting type 1 diabetes candidate genes using human protein-protein interaction networks.
-
Gao S, Wang X. Predicting type 1 diabetes candidate genes using human protein-protein interaction networks. J Comput Sci Syst Biol 2009, 2:133.
-
(2009)
J Comput Sci Syst Biol
, vol.2
, pp. 133
-
-
Gao, S.1
Wang, X.2
-
40
-
-
41549139527
-
Walking the interactome for prioritization of candidate disease genes.
-
Köhler S, Bauer S, Horn D, Robinson PN. Walking the interactome for prioritization of candidate disease genes. Am J Hum Genet 2008, 82:949-958.
-
(2008)
Am J Hum Genet
, vol.82
, pp. 949-958
-
-
Köhler, S.1
Bauer, S.2
Horn, D.3
Robinson, P.N.4
-
41
-
-
62849126285
-
Disease candidate gene identification and prioritization using protein interaction networks.
-
Chen J, Aronow BJ, Jegga AG. Disease candidate gene identification and prioritization using protein interaction networks. BMC Bioinformatics 2009, 10:73.
-
(2009)
BMC Bioinformatics
, vol.10
, pp. 73
-
-
Chen, J.1
Aronow, B.J.2
Jegga, A.G.3
-
42
-
-
42949096140
-
eQED: an efficient method for interpreting eQTL associations using protein networks.
-
Suthram S, Beyer A, Karp RM, Eldar Y, Ideker T. eQED: an efficient method for interpreting eQTL associations using protein networks. Mol Syst Biol 2008, 4:162.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 162
-
-
Suthram, S.1
Beyer, A.2
Karp, R.M.3
Eldar, Y.4
Ideker, T.5
-
43
-
-
65549138481
-
Identifying disease-specific genes based on their topological significance in protein networks.
-
Dezso Z, Nikolsky Y, Nikolskaya T, Miller J, Cherba D, Webb C, Bugrim A. Identifying disease-specific genes based on their topological significance in protein networks. BMC Syst Biol 2009, 3:36.
-
(2009)
BMC Syst Biol
, vol.3
, pp. 36
-
-
Dezso, Z.1
Nikolsky, Y.2
Nikolskaya, T.3
Miller, J.4
Cherba, D.5
Webb, C.6
Bugrim, A.7
-
44
-
-
77951952127
-
The power of protein interaction networks for associating genes with diseases.
-
Navlakha S, Kingsford C. The power of protein interaction networks for associating genes with diseases. Bioinformatics 2010, 26:1057-1063.
-
(2010)
Bioinformatics
, vol.26
, pp. 1057-1063
-
-
Navlakha, S.1
Kingsford, C.2
-
45
-
-
79959464683
-
DADA: degree-aware algorithms for network-based disease gene prioritization.
-
Erten S, Bebek G, Ewing RM, Koyuturk M. DADA: degree-aware algorithms for network-based disease gene prioritization. BioData Min 2011, 4:19.
-
(2011)
BioData Min
, vol.4
, pp. 19
-
-
Erten, S.1
Bebek, G.2
Ewing, R.M.3
Koyuturk, M.4
-
46
-
-
33646058032
-
A text-mining analysis of the human phenome.
-
Van Driel MA, Bruggeman J, Vriend G, Brunner HG, Leunissen JAM. A text-mining analysis of the human phenome. Eur J Hum Genet 2006, 14:535-542.
-
(2006)
Eur J Hum Genet
, vol.14
, pp. 535-542
-
-
Van Driel, M.A.1
Bruggeman, J.2
Vriend, G.3
Brunner, H.G.4
Leunissen, J.A.M.5
-
47
-
-
43249114206
-
Network-based global inference of human disease genes.
-
Wu X, Jiang R, Zhang MQ, Li S. Network-based global inference of human disease genes. Mol Syst Biol 2008, 4:189.
-
(2008)
Mol Syst Biol
, vol.4
, pp. 189
-
-
Wu, X.1
Jiang, R.2
Zhang, M.Q.3
Li, S.4
-
48
-
-
77952808324
-
Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network.
-
Li Y, Patra JC. Genome-wide inferring gene-phenotype relationship by walking on the heterogeneous network. Bioinformatics 2010, 26:1219-1224.
-
(2010)
Bioinformatics
, vol.26
, pp. 1219-1224
-
-
Li, Y.1
Patra, J.C.2
-
49
-
-
79956189223
-
Modularity-based credible prediction of disease genes and detection of disease subtypes on the phenotype-gene heterogeneous network.
-
Yao X, Hao H, Li Y, Li S. Modularity-based credible prediction of disease genes and detection of disease subtypes on the phenotype-gene heterogeneous network. BMC Syst Biol 2011, 5:79.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 79
-
-
Yao, X.1
Hao, H.2
Li, Y.3
Li, S.4
-
50
-
-
79959486836
-
Uncover disease genes by maximizing information flow in the phenome-interactome network.
-
Chen Y, Jiang T, Jiang R. Uncover disease genes by maximizing information flow in the phenome-interactome network. Bioinformatics 2011, 27: i167-i176.
-
(2011)
Bioinformatics
, vol.27
-
-
Chen, Y.1
Jiang, T.2
Jiang, R.3
-
51
-
-
80052420110
-
A computational method based on the integration of heterogeneous networks for predicting disease-gene associations.
-
Guo X, Gao L, Wei C, Yang X, Zhao Y, Dong A. A computational method based on the integration of heterogeneous networks for predicting disease-gene associations. PLoS One 2011, 6:e24171.
-
(2011)
PLoS One
, vol.6
-
-
Guo, X.1
Gao, L.2
Wei, C.3
Yang, X.4
Zhao, Y.5
Dong, A.6
-
53
-
-
76749134818
-
Associating genes and protein complexes with disease via network propagation.
-
Vanunu O, Magger O, Ruppin E, Shlomi T, Sharan R. Associating genes and protein complexes with disease via network propagation. PLoS Comput Biol 2010, 6:e1000641.
-
(2010)
PLoS Comput Biol
, vol.6
-
-
Vanunu, O.1
Magger, O.2
Ruppin, E.3
Shlomi, T.4
Sharan, R.5
-
54
-
-
79960732452
-
Inferring gene-phenotype associations via global protein complex network propagation.
-
Yang P, Li X, Wu M, Kwoh C-K, Ng S-K. Inferring gene-phenotype associations via global protein complex network propagation. PLoS One 2011, 6:e21502.
-
(2011)
PLoS One
, vol.6
-
-
Yang, P.1
Li, X.2
Wu, M.3
Kwoh, C.-K.4
Ng, S.-K.5
-
55
-
-
80053451879
-
Inferring disease and gene set associations with rank coherence in networks.
-
Hwang T, Zhang W, Xie M, Liu J, Kuang R. Inferring disease and gene set associations with rank coherence in networks. Bioinformatics 2011, 27:2692-2699.
-
(2011)
Bioinformatics
, vol.27
, pp. 2692-2699
-
-
Hwang, T.1
Zhang, W.2
Xie, M.3
Liu, J.4
Kuang, R.5
-
56
-
-
33646568805
-
Gene prioritization through genomic data fusion.
-
Aerts S, Lambrechts D, Maity S, Van Loo P, Coessens B, De Smet F, Tranchevent LC, De Moor B, Marynen P, Hassan B, et al. Gene prioritization through genomic data fusion. Nat Biotechnol 2006, 24:537-544.
-
(2006)
Nat Biotechnol
, vol.24
, pp. 537-544
-
-
Aerts, S.1
Lambrechts, D.2
Maity, S.3
Van Loo, P.4
Coessens, B.5
De Smet, F.6
Tranchevent, L.C.7
De Moor, B.8
Marynen, P.9
Hassan, B.10
-
57
-
-
75149162979
-
Integration of multiple data sources to prioritize candidate genes using discounted rating system.
-
Li Y, Patra JC. Integration of multiple data sources to prioritize candidate genes using discounted rating system. BMC Bioinformatics 2010, 11 (suppl 1):S20.
-
(2010)
BMC Bioinformatics
, vol.11
, Issue.SUPPL. 1
-
-
Li, Y.1
Patra, J.C.2
-
58
-
-
38049136610
-
Improved human disease candidate gene prioritization using mouse phenotype.
-
Chen J, Xu H, Aronow BJ, Jegga AG. Improved human disease candidate gene prioritization using mouse phenotype. BMC Bioinformatics 2007, 8:392.
-
(2007)
BMC Bioinformatics
, vol.8
, pp. 392
-
-
Chen, J.1
Xu, H.2
Aronow, B.J.3
Jegga, A.G.4
-
59
-
-
79958157611
-
Meta-analysis of heterogeneous data sources for genome-scale identification of risk genes in complex phenotypes.
-
Pers TH, Hansen NT, Lage K, Koefoed P, Dworzynski P, Miller ML, Flint TJ, Mellerup E, Dam H, Andreassen OA, et al. Meta-analysis of heterogeneous data sources for genome-scale identification of risk genes in complex phenotypes. Genet Epidemiol 2011, 35:318-332.
-
(2011)
Genet Epidemiol
, vol.35
, pp. 318-332
-
-
Pers, T.H.1
Hansen, N.T.2
Lage, K.3
Koefoed, P.4
Dworzynski, P.5
Miller, M.L.6
Flint, T.J.7
Mellerup, E.8
Dam, H.9
Andreassen, O.A.10
-
60
-
-
79959585242
-
In silico gene prioritization by integrating multiple data sources.
-
Chen Y, Wang W, Zhou Y, Shields R, Chanda SK, Elston RC, Li J. In silico gene prioritization by integrating multiple data sources. PLoS One 2011, 6:e21137.
-
(2011)
PLoS One
, vol.6
-
-
Chen, Y.1
Wang, W.2
Zhou, Y.3
Shields, R.4
Chanda, S.K.5
Elston, R.C.6
Li, J.7
-
62
-
-
47349128648
-
An integrated approach to inferring gene-disease associations in humans.
-
Radivojac P, Peng K, Clark WT, Peters BJ, Mohan A, Boyle SM, Mooney SD. An integrated approach to inferring gene-disease associations in humans. Proteins 2008, 72:1030-1037.
-
(2008)
Proteins
, vol.72
, pp. 1030-1037
-
-
Radivojac, P.1
Peng, K.2
Clark, W.T.3
Peters, B.J.4
Mohan, A.5
Boyle, S.M.6
Mooney, S.D.7
-
64
-
-
78651467817
-
A machine learning approach for genome-wide prediction of morbid and druggable human genes based on systems-level data.
-
Costa PR, Acencio ML, Lemke N. A machine learning approach for genome-wide prediction of morbid and druggable human genes based on systems-level data. BMC Genom 2010, 11:S9.
-
(2010)
BMC Genom
, vol.11
-
-
Costa, P.R.1
Acencio, M.L.2
Lemke, N.3
-
65
-
-
80053478616
-
ProDiGe: prioritization of disease genes with multitask machine learning from positive and unlabeled examples.
-
Mordelet F, Vert JP. ProDiGe: prioritization of disease genes with multitask machine learning from positive and unlabeled examples. BMC Bioinformatics 2011, 12:389.
-
(2011)
BMC Bioinformatics
, vol.12
, pp. 389
-
-
Mordelet, F.1
Vert, J.P.2
-
66
-
-
76249105279
-
Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network.
-
Linghu B, Snitkin ES, Hu Z, Xia Y, Delisi C. Genome-wide prioritization of disease genes and identification of disease-disease associations from an integrated human functional linkage network. Genome Biol 2009, 10:R91.
-
(2009)
Genome Biol
, vol.10
-
-
Linghu, B.1
Snitkin, E.S.2
Hu, Z.3
Xia, Y.4
Delisi, C.5
-
67
-
-
66449120271
-
Exploring the human genome with functional maps.
-
Huttenhower C, Haley EM, Hibbs MA, Dumeaux V, Barrett DR, Coller HA, Troyanskaya OG. Exploring the human genome with functional maps. Genome Res 2009, 19:1093-1106.
-
(2009)
Genome Res
, vol.19
, pp. 1093-1106
-
-
Huttenhower, C.1
Haley, E.M.2
Hibbs, M.A.3
Dumeaux, V.4
Barrett, D.R.5
Coller, H.A.6
Troyanskaya, O.G.7
-
68
-
-
79959898376
-
Prioritizing candidate disease genes by network-based boosting of genome-wide association data.
-
Lee I, Blom UM, Wang PI, Shim JE, Marcotte EM. Prioritizing candidate disease genes by network-based boosting of genome-wide association data. Genome Res 2011, 21:1109-1121.
-
(2011)
Genome Res
, vol.21
, pp. 1109-1121
-
-
Lee, I.1
Blom, U.M.2
Wang, P.I.3
Shim, J.E.4
Marcotte, E.M.5
-
69
-
-
79959340349
-
BioGraph: unsupervised biomedical knowledge discovery via automated hypothesis generation.
-
Liekens AM, De Knijf J, Daelemans W, Goethals B, De Rijk P, Del-Favero J. BioGraph: unsupervised biomedical knowledge discovery via automated hypothesis generation. Genome Biol 2011, 12:R57.
-
(2011)
Genome Biol
, vol.12
-
-
Liekens, A.M.1
De Knijf, J.2
Daelemans, W.3
Goethals, B.4
De Rijk, P.5
Del-Favero, J.6
-
70
-
-
79951521614
-
Using bioinformatics to predict the functional impact of SNVs.
-
Cline MS, Karchin R. Using bioinformatics to predict the functional impact of SNVs. Bioinformatics 2011, 27:441-448.
-
(2011)
Bioinformatics
, vol.27
, pp. 441-448
-
-
Cline, M.S.1
Karchin, R.2
-
71
-
-
80051968181
-
Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data.
-
Cooper GM, Shendure J. Needles in stacks of needles: finding disease-causal variants in a wealth of genomic data. Nat Rev Genet 2011, 12:628-640.
-
(2011)
Nat Rev Genet
, vol.12
, pp. 628-640
-
-
Cooper, G.M.1
Shendure, J.2
-
72
-
-
79959471457
-
Bioinformatics challenges for personalized medicine.
-
Fernald GH, Capriotti E, Daneshjou R, Karczewski KJ, Altman RB. Bioinformatics challenges for personalized medicine. Bioinformatics 2011, 27:1741-1748.
-
(2011)
Bioinformatics
, vol.27
, pp. 1741-1748
-
-
Fernald, G.H.1
Capriotti, E.2
Daneshjou, R.3
Karczewski, K.J.4
Altman, R.B.5
-
73
-
-
84856088973
-
Phylomedicine: an evolutionary telescope to explore and diagnose the universe of disease mutations.
-
Kumar S, Dudley JT, Filipski A, Liu L. Phylomedicine: an evolutionary telescope to explore and diagnose the universe of disease mutations. Trends Genet 2011, 27:377-386.
-
(2011)
Trends Genet
, vol.27
, pp. 377-386
-
-
Kumar, S.1
Dudley, J.T.2
Filipski, A.3
Liu, L.4
-
74
-
-
80052864956
-
In silico SNP analysis and bioinformatics tools: a review of the state of the art to aid drug discovery.
-
Mah JT, Low ES, Lee E. In silico SNP analysis and bioinformatics tools: a review of the state of the art to aid drug discovery. Drug Discov Today 2011, 16:800-809.
-
(2011)
Drug Discov Today
, vol.16
, pp. 800-809
-
-
Mah, J.T.1
Low, E.S.2
Lee, E.3
-
75
-
-
3543106033
-
Genome-wide identification of genes likely to be involved in human genetic disease.
-
López-Bigas N, Ouzounis CA. Genome-wide identification of genes likely to be involved in human genetic disease. Nucleic Acids Res 2004, 32:3108-3114.
-
(2004)
Nucleic Acids Res
, vol.32
, pp. 3108-3114
-
-
López-Bigas, N.1
Ouzounis, C.A.2
-
76
-
-
25444482801
-
Speeding disease gene discovery by sequence based candidate prioritization.
-
Adie EA, Adams RR, Evans KL, Porteous DJ, Pickard BS. Speeding disease gene discovery by sequence based candidate prioritization. BMC Bioinformatics 2005, 6:55.
-
(2005)
BMC Bioinformatics
, vol.6
, pp. 55
-
-
Adie, E.A.1
Adams, R.R.2
Evans, K.L.3
Porteous, D.J.4
Pickard, B.S.5
-
77
-
-
33644897576
-
Further understanding human disease genes by comparing with housekeeping genes and other genes.
-
Tu Z, Wang L, Xu M, Zhou X, Chen T, Sun F. Further understanding human disease genes by comparing with housekeeping genes and other genes. BMC Genomics 2006, 7:31.
-
(2006)
BMC Genomics
, vol.7
, pp. 31
-
-
Tu, Z.1
Wang, L.2
Xu, M.3
Zhou, X.4
Chen, T.5
Sun, F.6
-
79
-
-
0028230073
-
Understanding and using the medical subject headings (MeSH) vocabulary to perform literature searches.
-
Lowe HJ, Barnett GO. Understanding and using the medical subject headings (MeSH) vocabulary to perform literature searches. JAMA 1994, 271:1103-1108.
-
(1994)
JAMA
, vol.271
, pp. 1103-1108
-
-
Lowe, H.J.1
Barnett, G.O.2
-
80
-
-
0034069495
-
Gene Ontology: tool for the unification of biology. The Gene Ontology Consortium.
-
Ashburner M, Ball CA, Blake JA, Botstein D, Butler H, Cherry JM, Davis AP, Dolinski K, Dwight SS, Eppig JT, et al. Gene Ontology: tool for the unification of biology. The Gene Ontology Consortium. Nat Genet 2000, 25:25-29.
-
(2000)
Nat Genet
, vol.25
, pp. 25-29
-
-
Ashburner, M.1
Ball, C.A.2
Blake, J.A.3
Botstein, D.4
Butler, H.5
Cherry, J.M.6
Davis, A.P.7
Dolinski, K.8
Dwight, S.S.9
Eppig, J.T.10
-
81
-
-
79959846617
-
PSICQUIC and PSISCORE: accessing and scoring molecular interactions.
-
Aranda B, Blankenburg H, Kerrien S, Brinkman FSL, Ceol A, Chautard E, Dana JM, De Las Rivas J, Dumousseau M, Galeota E, et al. PSICQUIC and PSISCORE: accessing and scoring molecular interactions. Nat Methods 2011, 8:528-529.
-
(2011)
Nat Methods
, vol.8
, pp. 528-529
-
-
Aranda, B.1
Blankenburg, H.2
Kerrien, S.3
Brinkman, F.S.L.4
Ceol, A.5
Chautard, E.6
Dana, J.M.7
De Las Rivas, J.8
Dumousseau, M.9
Galeota, E.10
-
82
-
-
33748706765
-
Global topological features of cancer proteins in the human interactome.
-
Jonsson PF, Bates PA. Global topological features of cancer proteins in the human interactome. Bioinformatics 2006, 22:2291-2297.
-
(2006)
Bioinformatics
, vol.22
, pp. 2291-2297
-
-
Jonsson, P.F.1
Bates, P.A.2
-
83
-
-
33646687963
-
A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration.
-
Lim J, Hao T, Shaw C, Patel AJ, Szabó G, Rual JF, Fisk CJ, Li N, Smolyar A, Hill DE, et al. A protein-protein interaction network for human inherited ataxias and disorders of Purkinje cell degeneration. Cell 2006, 125:801-814.
-
(2006)
Cell
, vol.125
, pp. 801-814
-
-
Lim, J.1
Hao, T.2
Shaw, C.3
Patel, A.J.4
Szabó, G.5
Rual, J.F.6
Fisk, C.J.7
Li, N.8
Smolyar, A.9
Hill, D.E.10
-
84
-
-
41949118715
-
Network properties of genes harboring inherited disease mutations.
-
Feldman I, Rzhetsky A, Vitkup D. Network properties of genes harboring inherited disease mutations. Proc Natl Acad Sci USA 2008, 105:4323-4328.
-
(2008)
Proc Natl Acad Sci USA
, vol.105
, pp. 4323-4328
-
-
Feldman, I.1
Rzhetsky, A.2
Vitkup, D.3
-
85
-
-
0025020461
-
Linkage strategies for genetically complex traits. III. The effect of marker polymorphism on analysis of affected relative pairs.
-
Risch N. Linkage strategies for genetically complex traits. III. The effect of marker polymorphism on analysis of affected relative pairs. Am J Hum Genet 1990, 46:242-253.
-
(1990)
Am J Hum Genet
, vol.46
, pp. 242-253
-
-
Risch, N.1
-
86
-
-
0037447257
-
Assessing experimentally derived interactions in a small world.
-
Goldberg DS, Roth FP. Assessing experimentally derived interactions in a small world. Proc Natl Acad Sci USA 2003, 100:4372-4376.
-
(2003)
Proc Natl Acad Sci USA
, vol.100
, pp. 4372-4376
-
-
Goldberg, D.S.1
Roth, F.P.2
-
87
-
-
85081773703
-
-
The PageRank citation ranking: bringing order to the web. Technical Report, Stanford Digital Library Technologies Project
-
Page L, Brin S, Motwani R, Winograd T. The PageRank citation ranking: bringing order to the web. Technical Report, Stanford Digital Library Technologies Project, 1999.
-
(1999)
-
-
Page, L.1
Brin, S.2
Motwani, R.3
Winograd, T.4
-
88
-
-
77952376110
-
-
Algorithms for estimating relative importance in networks. In Proceedings of the Ninth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 266-275.
-
White S, Smyth P. Algorithms for estimating relative importance in networks. In Proceedings of the Ninth ACM SIGKDD International Conference on Knowledge Discovery and Data Mining, 2003, 266-275.
-
(2003)
-
-
White, S.1
Smyth, P.2
-
89
-
-
4243148480
-
Authoritative sources in a hyperlinked environment.
-
Kleinberg JM. Authoritative sources in a hyperlinked environment. JACM 1999, 46:604-632.
-
(1999)
JACM
, vol.46
, pp. 604-632
-
-
Kleinberg, J.M.1
-
90
-
-
22844446947
-
An integrative genomics approach to infer causal associations between gene expression and disease.
-
Schadt EE, Lamb J, Yang X, Zhu J, Edwards S, Guhathakurta D, Sieberts SK, Monks S, Reitman M, Zhang C, et al. An integrative genomics approach to infer causal associations between gene expression and disease. Nat Genet 2005, 37:710-717.
-
(2005)
Nat Genet
, vol.37
, pp. 710-717
-
-
Schadt, E.E.1
Lamb, J.2
Yang, X.3
Zhu, J.4
Edwards, S.5
Guhathakurta, D.6
Sieberts, S.K.7
Monks, S.8
Reitman, M.9
Zhang, C.10
-
91
-
-
40749105508
-
Variations in DNA elucidate molecular networks that cause disease.
-
Chen Y, Zhu J, Lum PY, Yang X, Pinto S, MacNeil DJ, Zhang C, Lamb J, Edwards S, Sieberts SK, et al. Variations in DNA elucidate molecular networks that cause disease. Nature 2008, 452:429-435.
-
(2008)
Nature
, vol.452
, pp. 429-435
-
-
Chen, Y.1
Zhu, J.2
Lum, P.Y.3
Yang, X.4
Pinto, S.5
MacNeil, D.J.6
Zhang, C.7
Lamb, J.8
Edwards, S.9
Sieberts, S.K.10
-
93
-
-
13944252976
-
A measure of betweenness centrality based on random walks.
-
Newman MEJ. A measure of betweenness centrality based on random walks. Soc Networks 2005, 27:39-54.
-
(2005)
Soc Networks
, vol.27
, pp. 39-54
-
-
Newman, M.E.J.1
-
94
-
-
61849113253
-
Graph clustering via a discrete uncoupling process.
-
Van Dongen S. Graph clustering via a discrete uncoupling process. SIAM J Matrix Anal Appl 2008, 30:121-141.
-
(2008)
SIAM J Matrix Anal Appl
, vol.30
, pp. 121-141
-
-
Van Dongen, S.1
-
95
-
-
57149127816
-
-
Graph summarization with bounded error. In Proceedings of the 2008 ACM SIGMOD International Conference on Management of Data, 419-432.
-
Navlakha S, Rastogi R, Shrivastava N. Graph summarization with bounded error. In Proceedings of the 2008 ACM SIGMOD International Conference on Management of Data, 2008, 419-432.
-
(2008)
-
-
Navlakha, S.1
Rastogi, R.2
Shrivastava, N.3
-
96
-
-
77950838057
-
Finding biologically accurate clusterings in hierarchical tree decompositions using the variation of information.
-
Navlakha S, White J, Nagarajan N, Pop M, Kingsford C. Finding biologically accurate clusterings in hierarchical tree decompositions using the variation of information. J Comput Biol 2010, 17:503-516.
-
(2010)
J Comput Biol
, vol.17
, pp. 503-516
-
-
Navlakha, S.1
White, J.2
Nagarajan, N.3
Pop, M.4
Kingsford, C.5
-
97
-
-
34547858473
-
Computational analysis of human protein interaction networks.
-
Ramírez F, Schlicker A, Assenov Y, Lengauer T, Albrecht M. Computational analysis of human protein interaction networks. Proteomics 2007, 7: 2541-2552.
-
(2007)
Proteomics
, vol.7
, pp. 2541-2552
-
-
Ramírez, F.1
Schlicker, A.2
Assenov, Y.3
Lengauer, T.4
Albrecht, M.5
-
98
-
-
58149213932
-
Literature-curated protein interaction datasets.
-
Cusick ME, Yu H, Smolyar A, Venkatesan K, Carvunis AR, Simonis N, Rual JF, Borick H, Braun P, Dreze M, et al. Literature-curated protein interaction datasets. Nat Methods 2009, 6:39-46.
-
(2009)
Nat Methods
, vol.6
, pp. 39-46
-
-
Cusick, M.E.1
Yu, H.2
Smolyar, A.3
Venkatesan, K.4
Carvunis, A.R.5
Simonis, N.6
Rual, J.F.7
Borick, H.8
Braun, P.9
Dreze, M.10
-
99
-
-
34548567227
-
The commonality of protein interaction networks determined in neurodegenerative disorders (NDDs).
-
Limviphuvadh V, Tanaka S, Goto S, Ueda K, Kanehisa M. The commonality of protein interaction networks determined in neurodegenerative disorders (NDDs). Bioinformatics 2007, 23:2129-2138.
-
(2007)
Bioinformatics
, vol.23
, pp. 2129-2138
-
-
Limviphuvadh, V.1
Tanaka, S.2
Goto, S.3
Ueda, K.4
Kanehisa, M.5
-
100
-
-
33845545435
-
The modular nature of genetic diseases.
-
Oti M, Brunner HG. The modular nature of genetic diseases. Clin Genet 2007, 71:1-11.
-
(2007)
Clin Genet
, vol.71
, pp. 1-11
-
-
Oti, M.1
Brunner, H.G.2
-
102
-
-
48449097800
-
ENDEAVOUR update: a web resource for gene prioritization in multiple species.
-
Tranchevent LC, Barriot R, Yu S, Van Vooren S, Van Loo P, Coessens B, De Moor B, Aerts S, Moreau Y. ENDEAVOUR update: a web resource for gene prioritization in multiple species. Nucleic Acids Res 2008, 36:W377-W384.
-
(2008)
Nucleic Acids Res
, vol.36
-
-
Tranchevent, L.C.1
Barriot, R.2
Yu, S.3
Van Vooren, S.4
Van Loo, P.5
Coessens, B.6
De Moor, B.7
Aerts, S.8
Moreau, Y.9
-
103
-
-
77955019256
-
Large-scale benchmark of Endeavour using MetaCore maps.
-
Schuierer S, Tranchevent LC, Dengler U, Moreau Y. Large-scale benchmark of Endeavour using MetaCore maps. Bioinformatics 2010, 26:1922-1923.
-
(2010)
Bioinformatics
, vol.26
, pp. 1922-1923
-
-
Schuierer, S.1
Tranchevent, L.C.2
Dengler, U.3
Moreau, Y.4
-
104
-
-
0033982936
-
KEGG: kyoto encyclopedia of genes and genomes.
-
Kanehisa M, Goto S. KEGG: kyoto encyclopedia of genes and genomes. Nucleic Acids Res 2000, 28:27-30.
-
(2000)
Nucleic Acids Res
, vol.28
, pp. 27-30
-
-
Kanehisa, M.1
Goto, S.2
-
105
-
-
0035171884
-
BIND-The Biomolecular Interaction Network Database.
-
Bader GD, Donaldson I, Wolting C, Ouellette BF, Pawson T, Hogue CW. BIND-The Biomolecular Interaction Network Database. Nucleic Acids Res 2001, 29:242-245.
-
(2001)
Nucleic Acids Res
, vol.29
, pp. 242-245
-
-
Bader, G.D.1
Donaldson, I.2
Wolting, C.3
Ouellette, B.F.4
Pawson, T.5
Hogue, C.W.6
-
106
-
-
58149193222
-
Human Protein Reference Database-2009 update.
-
Keshava Prasad TS, Goel R, Kandasamy K, Keerthikumar S, Kumar S, Mathivanan S, Telikicherla D, Raju R, Shafreen B, Venugopal A, et al. Human Protein Reference Database-2009 update. Nucleic Acids Res 2009, 37:D767-D772.
-
(2009)
Nucleic Acids Res
, vol.37
-
-
Keshava Prasad, T.S.1
Goel, R.2
Kandasamy, K.3
Keerthikumar, S.4
Kumar, S.5
Mathivanan, S.6
Telikicherla, D.7
Raju, R.8
Shafreen, B.9
Venugopal, A.10
-
107
-
-
13444259844
-
Reactome: a knowledgebase of biological pathways.
-
Joshi-Tope G, Gillespie M, Vastrik I, D'Eustachio P, Schmidt E, De Bono B, Jassal B, Gopinath GR, Wu GR, Matthews L, et al. Reactome: a knowledgebase of biological pathways. Nucleic Acids Res 2005, 33:D428-D432.
-
(2005)
Nucleic Acids Res
, vol.33
-
-
Joshi-Tope, G.1
Gillespie, M.2
Vastrik, I.3
D'Eustachio, P.4
Schmidt, E.5
De Bono, B.6
Jassal, B.7
Gopinath, G.R.8
Wu, G.R.9
Matthews, L.10
-
108
-
-
58149305794
-
An empirical framework for binary interactome mapping.
-
Venkatesan K, Rual J, Vazquez A, Stelzl U, Lemmens I, Hirozane-Kishikawa T, Hao T, Zenkner M, Xin X, Goh K, et al. An empirical framework for binary interactome mapping. Nat Methods 2009, 6:83-90.
-
(2009)
Nat Methods
, vol.6
, pp. 83-90
-
-
Venkatesan, K.1
Rual, J.2
Vazquez, A.3
Stelzl, U.4
Lemmens, I.5
Hirozane-Kishikawa, T.6
Hao, T.7
Zenkner, M.8
Xin, X.9
Goh, K.10
-
110
-
-
79953744330
-
Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach.
-
Zhang W, Sun F, Jiang R. Integrating multiple protein-protein interaction networks to prioritize disease genes: a Bayesian regression approach. BMC Bioinformatics 2011, 12:S11.
-
(2011)
BMC Bioinformatics
, vol.12
-
-
Zhang, W.1
Sun, F.2
Jiang, R.3
-
111
-
-
49549123622
-
Comparison of vocabularies, representations and ranking algorithms for gene prioritization by text mining.
-
Yu S, Van Vooren S, Tranchevent LC, De Moor B, Moreau Y. Comparison of vocabularies, representations and ranking algorithms for gene prioritization by text mining. Bioinformatics 2008, 24:i119-i125.
-
(2008)
Bioinformatics
, vol.24
-
-
Yu, S.1
Van Vooren, S.2
Tranchevent, L.C.3
De Moor, B.4
Moreau, Y.5
-
112
-
-
79955099476
-
DomainRBF: a Bayesian regression approach to the prioritization of candidate domains for complex diseases.
-
Zhang W, Chen Y, Sun F, Jiang R. DomainRBF: a Bayesian regression approach to the prioritization of candidate domains for complex diseases. BMC Syst Biol 2011, 5:55.
-
(2011)
BMC Syst Biol
, vol.5
, pp. 55
-
-
Zhang, W.1
Chen, Y.2
Sun, F.3
Jiang, R.4
-
113
-
-
0038104857
-
Genomic gene clustering analysis of pathways in eukaryotes.
-
Lee JM, Sonnhammer EL. Genomic gene clustering analysis of pathways in eukaryotes. Genome Res 2003, 13:875-882.
-
(2003)
Genome Res
, vol.13
, pp. 875-882
-
-
Lee, J.M.1
Sonnhammer, E.L.2
-
114
-
-
58049220319
-
Align human interactome with phenome to identify causative genes and networks underlying disease families.
-
Wu X, Liu Q, Jiang R. Align human interactome with phenome to identify causative genes and networks underlying disease families. Bioinformatics 2009, 25:98-104.
-
(2009)
Bioinformatics
, vol.25
, pp. 98-104
-
-
Wu, X.1
Liu, Q.2
Jiang, R.3
-
115
-
-
65849165004
-
Network analysis of differential expression for the identification of disease-causing genes.
-
Nitsch D, Tranchevent LC, Thienpont B, Thorrez L, Van Esch H, Devriendt K, Moreau Y. Network analysis of differential expression for the identification of disease-causing genes. PLoS One 2009, 4:e5526.
-
(2009)
PLoS One
, vol.4
-
-
Nitsch, D.1
Tranchevent, L.C.2
Thienpont, B.3
Thorrez, L.4
Van Esch, H.5
Devriendt, K.6
Moreau, Y.7
-
116
-
-
77956477380
-
Candidate gene prioritization by network analysis of differential expression using machine learning approaches.
-
Nitsch D, Gonçalves JP, Ojeda F, De Moor B, Moreau Y. Candidate gene prioritization by network analysis of differential expression using machine learning approaches. BMC Bioinformatics 2010, 11:460.
-
(2010)
BMC Bioinformatics
, vol.11
, pp. 460
-
-
Nitsch, D.1
Gonçalves, J.P.2
Ojeda, F.3
De Moor, B.4
Moreau, Y.5
-
117
-
-
79953645463
-
Identifying causal genes and dysregulated pathways in complex diseases.
-
Kim YA, Wuchty S, Przytycka TM. Identifying causal genes and dysregulated pathways in complex diseases. PLoS Comput Biol 2011, 7:e1001095.
-
(2011)
PLoS Comput Biol
, vol.7
-
-
Kim, Y.A.1
Wuchty, S.2
Przytycka, T.M.3
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