메뉴 건너뛰기




Volumn 22, Issue 22, 2006, Pages 2800-2805

Discovering disease-genes by topological features in human protein-protein interaction network

Author keywords

[No Author keywords available]

Indexed keywords

ADENYLATE CYCLASE; ADENYLATE CYCLASE 5; BASIC CHARGE Y LINKED 2 PROTEIN; BINDING PROTEIN; ECTODYSPLASIN RECEPTOR; I KAPPA B KINASE; IMMUNOGLOBULIN ENHANCER BINDING PROTEIN; MEMBRANE RECEPTOR; MESSENGER RNA; PROTEIN BCL 2; PROTEIN DERIVATIVE; TRANSFORMING GROWTH FACTOR BETA ACTIVATED KINASE 1; TRANSFORMING GROWTH FACTOR BETA ACTIVATED KINASE 1 BINDING PROTEIN 2; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 6; UNCLASSIFIED DRUG;

EID: 33751017706     PISSN: 13674803     EISSN: 13674811     Source Type: Journal    
DOI: 10.1093/bioinformatics/btl467     Document Type: Article
Times cited : (381)

References (30)
  • 1
    • 25444482801 scopus 로고    scopus 로고
    • Speeding disease gene discovery by sequence based candidate prioritization
    • Adie,E.A. et al. (2005) Speeding disease gene discovery by sequence based candidate prioritization. BMC Bioinformatics, 6, 55.
    • (2005) BMC Bioinformatics , vol.6 , pp. 55
    • Adie, E.A.1
  • 2
    • 33646568805 scopus 로고    scopus 로고
    • Gene prioritization through genomic data fusion
    • Aerts,S. et al. (2006) Gene prioritization through genomic data fusion. Nat. Biotechnol., 24, 537-544.
    • (2006) Nat. Biotechnol. , vol.24 , pp. 537-544
    • Aerts, S.1
  • 3
    • 1842507609 scopus 로고    scopus 로고
    • Genomics in sudden cardiac death
    • Arking,D.E. et al. (2004) Genomics in sudden cardiac death. Circ. Res., 94, 712-723.
    • (2004) Circ. Res. , vol.94 , pp. 712-723
    • Arking, D.E.1
  • 4
    • 0036787307 scopus 로고    scopus 로고
    • Beyond Mendel: An evolving view of human genetic disease transmission
    • Badano,J.L. and Katsanis,N. (2002) Beyond Mendel: An evolving view of human genetic disease transmission. Nat. Rev. Genet., 3, 779-789.
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 779-789
    • Badano, J.L.1    Katsanis, N.2
  • 5
    • 0037245913 scopus 로고    scopus 로고
    • BIND: The Biomolecular Interaction Network Database
    • Bader,G.D. et al. (2003) BIND: The Biomolecular Interaction Network Database. Nucleic Acids Res., 31, 248-250.
    • (2003) Nucleic Acids Res. , vol.31 , pp. 248-250
    • Bader, G.D.1
  • 6
    • 0037373275 scopus 로고    scopus 로고
    • Discovering genotypes underlying human phenotypes: Past successes for mendelian disease, future approaches for complex disease
    • Botstein,D. and Risch,N. (2003) Discovering genotypes underlying human phenotypes: Past successes for mendelian disease, future approaches for complex disease. Nat. Genet., 33 (Suppl.), 228-237.
    • (2003) Nat. Genet. , vol.33 , Issue.SUPPL. , pp. 228-237
    • Botstein, D.1    Risch, N.2
  • 7
    • 18744376914 scopus 로고    scopus 로고
    • Online predicted human interaction database
    • Brown,K.R. and Jurisica,I. (2005) Online predicted human interaction database. Bioinformatics, 21, 2076-2082.
    • (2005) Bioinformatics , vol.21 , pp. 2076-2082
    • Brown, K.R.1    Jurisica, I.2
  • 8
    • 3042841887 scopus 로고    scopus 로고
    • From syndrome families to functional genomics
    • Brunner,H.G. and van Driel,M.A. (2004) From syndrome families to functional genomics. Nat. Rev. Genet., 5, 545-551.
    • (2004) Nat. Rev. Genet. , vol.5 , pp. 545-551
    • Brunner, H.G.1    van Driel, M.A.2
  • 9
    • 33646362551 scopus 로고    scopus 로고
    • Systematic identification of human mitochondrial disease genes through integrative genomics
    • Calvo,S. et al. (2006) Systematic identification of human mitochondrial disease genes through integrative genomics. Nat. Genet., 38, 576-582.
    • (2006) Nat. Genet. , vol.38 , pp. 576-582
    • Calvo, S.1
  • 10
    • 0003922190 scopus 로고    scopus 로고
    • Pattern Classification
    • Wiley, NY
    • Duda,R.O., Hart,P.E. and Stork,D.G. (2000) Pattern Classification. Wiley, NY.
    • (2000)
    • Duda, R.O.1    Hart, P.E.2    Stork, D.G.3
  • 11
    • 33646884801 scopus 로고    scopus 로고
    • Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes
    • Franke,L. et al. (2006) Reconstruction of a functional human gene network, with an application for prioritizing positional candidate genes. Am. J. Hum. Genet., 78, 1011-1025.
    • (2006) Am. J. Hum. Genet. , vol.78 , pp. 1011-1025
    • Franke, L.1
  • 12
    • 33644617753 scopus 로고    scopus 로고
    • Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets
    • Gandhi,T.K. et al. (2006) Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets. Nat. Genet., 38, 285-293.
    • (2006) Nat. Genet. , vol.38 , pp. 285-293
    • Gandhi, T.K.1
  • 13
    • 0037447257 scopus 로고    scopus 로고
    • Assessing experimentally derived interactions in a small world
    • Goldberg,D.S. and Roth,F.P. (2003) Assessing experimentally derived interactions in a small world. Proc. Natl Acad. Sci. USA, 100, 4372-4376.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 4372-4376
    • Goldberg, D.S.1    Roth, F.P.2
  • 15
    • 13444266370 scopus 로고    scopus 로고
    • Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders
    • Hamosh,A. et al. (2005) Online Mendelian Inheritance in Man (OMIM), a knowledgebase of human genes and genetic disorders. Nucleic Acids Res., 33, D514-D517.
    • (2005) Nucleic Acids Res. , vol.33
    • Hamosh, A.1
  • 16
    • 3543106033 scopus 로고    scopus 로고
    • Genome-wide identification of genes likely to be involved in human genetic disease
    • Lopez-Bigas,N. and Ouzounis,C.A. (2004) Genome-wide identification of genes likely to be involved in human genetic disease. Nucleic Acids Res., 32, 3108-3114.
    • (2004) Nucleic Acids Res. , vol.32 , pp. 3108-3114
    • Lopez-Bigas, N.1    Ouzounis, C.A.2
  • 17
    • 28744438757 scopus 로고    scopus 로고
    • TAB2, TRAF6 and TAK1 are involved in NF-kappaB activation induced by the TNF-receptor, Edar and its adaptator Edaradd
    • Morlon,A. et al. (2005) TAB2, TRAF6 and TAK1 are involved in NF-kappaB activation induced by the TNF-receptor, Edar and its adaptator Edaradd. Hum. Mol. Genet., 14, 3751-3757.
    • (2005) Hum. Mol. Genet. , vol.14 , pp. 3751-3757
    • Morlon, A.1
  • 18
    • 0042691820 scopus 로고    scopus 로고
    • Disruption of type 5 adenylyl cyclase gene preserves cardiac function against pressure overload
    • Okumura,S. et al. (2003) Disruption of type 5 adenylyl cyclase gene preserves cardiac function against pressure overload. Proc. Natl Acad. Sci. USA, 100, 9986-9990.
    • (2003) Proc. Natl Acad. Sci. USA , vol.100 , pp. 9986-9990
    • Okumura, S.1
  • 19
    • 33747035889 scopus 로고    scopus 로고
    • Predicting disease genes using protein-protein interactions
    • Oti,M. et al. (2006) Predicting disease genes using protein-protein interactions. J. Med. Genet.
    • (2006) J. Med. Genet.
    • Oti, M.1
  • 20
    • 0036649742 scopus 로고    scopus 로고
    • Association of genes to genetically inherited diseases using data mining
    • Perez-Iratxeta,C. et al. (2002) Association of genes to genetically inherited diseases using data mining. Nat. Genet., 31, 316-319.
    • (2002) Nat. Genet. , vol.31 , pp. 316-319
    • Perez-Iratxeta, C.1
  • 21
    • 10744224197 scopus 로고    scopus 로고
    • Development of human protein reference database as an initial platform for approaching systems biology in humans
    • Peri,S. et al. (2003) Development of human protein reference database as an initial platform for approaching systems biology in humans. Genome Res., 13, 2363-2371.
    • (2003) Genome Res. , vol.13 , pp. 2363-2371
    • Peri, S.1
  • 22
    • 0034064082 scopus 로고    scopus 로고
    • Deletion of Y-chromosome specific genes in human prostate cancer
    • Perinchery,G. et al. (2000) Deletion of Y-chromosome specific genes in human prostate cancer. J. Urol., 163, 1339-1342.
    • (2000) J. Urol. , vol.163 , pp. 1339-1342
    • Perinchery, G.1
  • 23
    • 25144516911 scopus 로고    scopus 로고
    • Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome
    • Ramani,A.K. et al. (2005) Consolidating the set of known human protein-protein interactions in preparation for large-scale mapping of the human interactome. Genome Biol., 6, R40.
    • (2005) Genome Biol. , vol.6
    • Ramani, A.K.1
  • 24
    • 27144530248 scopus 로고    scopus 로고
    • Towards a proteome-scale map of the human protein-protein interaction network
    • Rual,J.F. et al. (2005) Towards a proteome-scale map of the human protein-protein interaction network. Nature, 437, 1173-1178.
    • (2005) Nature , vol.437 , pp. 1173-1178
    • Rual, J.F.1
  • 25
    • 25144498379 scopus 로고    scopus 로고
    • A human protein-protein interaction network: A resource for annotating the proteome
    • Stelzl,U. et al. (2005) A human protein-protein interaction network: A resource for annotating the proteome. Cell, 122, 957-968.
    • (2005) Cell , vol.122 , pp. 957-968
    • Stelzl, U.1
  • 26
    • 0041914418 scopus 로고    scopus 로고
    • Specific expression of VCY2 in human male germ cells and its involvement in the pathogenesis of male infertility
    • Tse,J.Y. et al. (2003) Specific expression of VCY2 in human male germ cells and its involvement in the pathogenesis of male infertility. Biol. Reprod., 69, 746-751.
    • (2003) Biol. Reprod. , vol.69 , pp. 746-751
    • Tse, J.Y.1
  • 27
    • 33644897576 scopus 로고    scopus 로고
    • Further understanding human disease genes by comparing with housekeeping genes and other genes
    • Tu,Z. et al. (2006) Further understanding human disease genes by comparing with housekeeping genes and other genes. BMC Genomics, 7, 31.
    • (2006) BMC Genomics , vol.7 , pp. 31
    • Tu, Z.1
  • 28
    • 1542787787 scopus 로고    scopus 로고
    • POCUS: Mining genomic sequence annotation to predict disease genes
    • Turner,F.S. et al. (2003) POCUS: Mining genomic sequence annotation to predict disease genes. Genome Biol., 4, R75.
    • (2003) Genome Biol. , vol.4
    • Turner, F.S.1
  • 29
    • 0037138406 scopus 로고    scopus 로고
    • MINT: A Molecular INTeraction database
    • Zanzoni,A. et al. (2002) MINT: A Molecular INTeraction database. FEBS Lett., 513, 135-140.
    • (2002) FEBS Lett. , vol.513 , pp. 135-140
    • Zanzoni, A.1
  • 30
    • 0036715858 scopus 로고    scopus 로고
    • Expression of adenylyl cyclase V/VI mRNA and protein is upregulated in cyanotic infant human myocardium
    • Zhao,Y. et al. (2002) Expression of adenylyl cyclase V/VI mRNA and protein is upregulated in cyanotic infant human myocardium. Pediatr Cardiol, 23, 536-541.
    • (2002) Pediatr Cardiol , vol.23 , pp. 536-541
    • Zhao, Y.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.