Functional characterizations of RIG-I to GCRV and viral/bacterial PAMPs in Grass Carp Ctenopharyngodon idella

PLoS ONE

Volumn 7, Issue 7, 2012, Pages

  Chen, Lijun ^a   Su, Jianguo ^a   Yang, Chunrong ^a   Peng, Limin ^a   Wan, Quanyuan ^a   Wang, Lan ^a  

^a NORTHWEST A F UNIVERSITY   (China)

Author keywords

[No Author keywords available]

Indexed keywords

BACTERIUM LIPOPOLYSACCHARIDE; CASPASE RECRUITMENT DOMAIN SIGNALING PROTEIN; DOUBLE STRANDED RNA; HELICASE; MESSENGER RNA; PEPTIDOGLYCAN; POLYINOSINIC POLYCYTIDYLIC ACID; RETINOIC ACID INDUCIBLE PROTEIN I;

ANIMAL CELL; ANTIVIRAL ACTIVITY; ARTICLE; CARP; CELL STIMULATION; CONTROLLED STUDY; CYTOSOL; GENE OVEREXPRESSION; GENETIC TRANSFECTION; GRASS CARP; KIDNEY CELL; NONHUMAN; NUCLEOTIDE SEQUENCE; PLASMID; PROTEIN DOMAIN; PROTEIN EXPRESSION; PROTEIN FUNCTION; PROTEIN MOTIF; QUANTITATIVE ANALYSIS; REAL TIME POLYMERASE CHAIN REACTION; REOVIRUS; REVERSE TRANSCRIPTION POLYMERASE CHAIN REACTION; SIGNAL TRANSDUCTION; TELEOST;

ANIMALS; CARPS; MOLECULAR SEQUENCE DATA; REAL-TIME POLYMERASE CHAIN REACTION; SIGNAL TRANSDUCTION; VIRUS DISEASES;

BACTERIA (MICROORGANISMS); CTENOPHARYNGODON; CTENOPHARYNGODON IDELLA; DSRNA VIRUSES; GRASS CARP REOVIRUS; MAMMALIA; TELEOSTEI;

EID: 84864482166     PISSN: None     EISSN: 19326203     Source Type: Journal    
DOI: 10.1371/journal.pone.0042182     Document Type: Article

References (52)

1. Akira S, Uematsu S, Takeuchi O, (2006) Pathogen recognition and innate immunity. Cell 124: 783-801.
2. Iwasaki A, Medzhitov R, (2010) Regulation of adaptive immunity by the innate immune system. Science 327: 291-295.
3. Takeuchi O, Akira S, (2010) Pattern recognition receptors and inflammation. Cell 140: 805-820.
4. Creagh E, Oneill L, (2006) TLRs, NLRs and RLRs: a trinity of pathogen sensors that co-operate in innate immunity. Trends Immunol 27: 352-357.
5. Blasius AL, Beutler B, (2010) Intracellular Toll-like receptors. Immunity 32: 305-315.
6. Ting JPY, Duncan JA, Lei Y, (2010) How the noninflammasome NLRs function in the innate immune system. Science 327: 286-290.
7. Nakhaei P, Genin P, Civas A, Hiscott J, (2009) RIG-I-like receptors: sensing and responding to RNA virus infection. Semin Immunol 21: 215-222.
8. Ramos HJ, Gale M, (2011) RIG-I like receptors and their signaling crosstalk in the regulation of antiviral immunity. Curr Opin Virol 1: 167-176.
9. Kawai T, Akira S, (2008) Toll-like receptor and RIG-I-like receptor signaling. Ann NY Acad Sci 1143: 1-20.
10. Zou J, Chang M, Nie P, Secombes CJ, (2009) Origin and evolution of the RIG-I like RNA helicase gene family. BMC Evol Biol 9: 85.
11. Sarkar D, DeSalle R, Fisher PB, (2008) Evolution of MDA-5/RIG-I-dependent innate immunity: Independent evolution by domain grafting. Proc Natl Acad Sci USA 105: 17040-17045.
12. Rehwinkel J, Reis e Sousa C, (2010) RIGorous detection: exposing virus through RNA sensing. Science 327: 284-286.
13. Chiu YH, MacMillan JB, Chen ZJ, (2009) RNA polymerase III detects cytosolic DNA and induces type I interferons through the RIG-I pathway. Cell 138: 576-591.
14. Kong L, Sun L, Zhang H, Liu Q, Liu Y, et al. (2009) An essential role for RIG-I in toll-like receptor-stimulated phagocytosis. Cell Host Microbe 6: 150-161.
15. Saito T, Hirai R, Loo YM, Owen D, Johnson CL, et al. (2007) Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2. Proc Natl Acad Sci USA 104: 582-587.
16. Kumar H, Kawai T, Kato H, Sato S, Takahashi K, et al. (2006) Essential role of IPS-1 in innate immune responses against RNA viruses. J Exp Med 203: 1795-1803.
17. Gack MU, Nistal-Villan E, Inn KS, Garcia-Sastre A, Jung JU, (2010) Phosphorylation-mediated negative regulation of RIG-I antiviral activity. J Virol 84: 3220-3229.
18. Sharma S, Fitzgerald KA, (2011) Innate immune sensing of DNA. PLoS Pathog 7: e1001310.
19. Samuel CE, (2001) Antiviral actions of interferons. Clin Microbiol Rev 14: 778-809.
20. Wang L, Su J, Peng L, Heng J, Chen L, (2011) Genomic structure of grass carp Mx2 and the association of its polymorphisms with susceptibility/resistance to grass carp reovirus. Mol Immunol 49: 359-366.
21. Bamming D, Horvath CM, (2009) Regulation of signal transduction by enzymatically inactive antiviral RNA helicase proteins MDA5, RIG-I, and LGP2. J Biol Chem 284: 9700-9712.
22. Cui S, Eisenächer K, Kirchhofer A, Brzózka K, Lammens A, et al. (2008) The C-terminal regulatory domain is the RNA 5′-triphosphate sensor of RIG-I. Mol Cell 29: 169-179.
23. Pothlichet J, Burtey A, Kubarenko AV, Caignard G, Solhonne B, et al. (2009) Study of human RIG-I polymorphisms identifies two variants with an opposite impact on the antiviral immune response. PLoS One 4: e7582.
24. Biacchesi S, LeBerre M, Lamoureux A, Louise Y, Lauret E, et al. (2009) Mitochondrial antiviral signaling protein plays a major role in induction of the fish innate immune response against RNA and DNA viruses. J Virol 83: 7815-7827.
25. Feng H, Liu H, Kong R, Wang L, Wang Y, et al. (2011) Expression profiles of carp IRF-3/-7 correlate with the up-regulation of RIG-I/MAVS/TRAF3/TBK1, four pivotal molecules in RIG-I signaling pathway. Fish Shellfish Immunol 30: 1159-1169.
26. Lauksund S, Svingerud T, Bergan V, Robertsen B, (2009) Atlantic salmon IPS-1 mediates induction of IFNa1 and activation of NF-κB and localizes to mitochondria. Dev Comp Immunol 33: 1196-1204.
27. Rajendran KV, Zhang J, Liu S, Peatman E, Kucuktas H, et al. (2012) Pathogen recognition receptors in channel catfish: II. Identification, phylogeny and expression of retinoic acid-inducible gene I (RIG-I)-like receptors (RLRs). Dev Comp Immunol 37: 381-389.
28. Sun F, Zhang YB, Liu TK, Shi J, Wang B, et al. (2011) Fish MITA serves as a mediator for distinct fish IFN gene activation dependent on IRF3 or IRF7. J Immunol 187: 2531-2539.
29. Yang C, Su J, Huang T, Zhang R, Peng L, (2011) Identification of a retinoic acid-inducible gene I from grass carp (Ctenopharyngodon idella) and expression analysis in vivo and in vitro. Fish Shellfish Immunol 30: 936-943.
30. Poltorak A, He X, Smirnova I, Liu MY, Van Huffel C, et al. (1998) Defective LPS signaling in C3H/HeJ and C57BL/10ScCr mice: mutations in TLR4 gene. Science 282: 2085-2088.
31. Müller-Anstett MA, Müller P, Albrecht T, Nega M, Wagener J, et al. (2010) Staphylococcal peptidoglycan co-localizes with Nod2 and TLR2 and activates innate immune response via both receptors in primary murine keratinocytes. PLoS One 5: e13153.
32. Imaizumi T, Aratani S, Nakajima T, Carlson M, Matsumiya T, et al. (2002) Retinoic acid-inducible gene-i is induced in endothelial cells by LPS and regulates expression of COX-2. Biochem Biophys Res Commun 292: 274-279.
33. Fang Q, Attoui H, Cantaloube JF, Biagini P, Zhu Z, et al. (2000) Sequence of genome segments 1, 2, and 3 of the grass carp reovirus (Genus Aquareovirus, family Reoviridae). Biochem Biophys Res Commun 274: 762-766.
34. Su J, Heng J, Huang T, Peng L, Yang C, et al. (2012) Identification, mRNA expression and genomic structure of TLR22 and its association with GCRV susceptibility/resistance in grass carp (Ctenopharyngodon idella). Dev Comp Immunol 36: 450-462.
35. Yoneyama M, Kikuchi M, Natsukawa T, Shinobu N, Imaizumi T, et al. (2004) The RNA helicase RIG-I has an essential function in double-stranded RNA-induced innate antiviral responses. Nat Immunol 5: 730-737.
36. Loo Y-M, Gale M, (2011) Immune signaling by RIG-I-like receptors. Immunity 34: 680-692.
37. Schoggins JW, Wilson SJ, Panis M, Murphy MY, Jones CT, et al. (2011) A diverse range of gene products are effectors of the type I interferon antiviral response. Nature 472: 481-485.
38. Matsumiya T, Stafforini DM, (2010) Function and regulation of retinoic acid-inducible gene-I. Crit Rev Immunol 30: 489-513.
39. Hu J, Nistal-Villan E, Voho A, Ganee A, Kumar M, et al. (2010) A common polymorphism in the caspase recruitment domain of RIG-I modifies the innate immune response of human dendritic cells. J Immunol 185: 424-432.
40. Yoneyama M, Kikuchi M, Matsumoto K, Imaizumi T, Miyagishi M, et al. (2005) Shared and unique functions of the DExD/H-box helicases RIG-I, MDA5, and LGP2 in antiviral innate immunity. J Immunol 175: 2851-2858.
41. Hausmann S, Marq JB, Tapparel C, Kolakofsky D, Garcin D, (2008) RIG-I and dsRNA-induced IFNβ activation. PLoS One 3: e3965.
42. Huang T, Su J, Heng J, Dong J, Zhang R, et al. (2010) Identification and expression profiling analysis of grass carp Ctenopharyngodon idella LGP2 cDNA. Fish Shellfish Immunol 29: 349-355.
43. Ohtani M, Hikima J, Kondo H, Hirono I, Jung TS, et al. (2010) Evolutional conservation of molecular structure and antiviral function of a viral RNA receptor, LGP2, in Japanese flounder, Paralichthys olivaceus. J Immunol 185: 7507-7517.
44. Chang M, Collet B, Nie P, Lester K, Campbell S, et al. (2011) Expression and functional characterization of the RIG-I-like receptors MDA5 and LGP2 in Rainbow trout (Oncorhynchus mykiss). J Virol 85: 8403-8412.
45. Ranjith-Kumar CT, Murali A, Dong W, Srisathiyanarayanan D, Vaughan R, et al. (2009) Agonist and antagonist recognition by RIG-I, a cytoplasmic innate immunity receptor. J Biol Chem 284: 1155-1165.
46. Jiang F, Ramanathan A, Miller MT, Tang GQ, Gale M Jr, et al. (2011) Structural basis of RNA recognition and activation by innate immune receptor RIG-I. Nature 479: 423-427.
47. Jeong YI, Jung ID, Lee CM, Chang JH, Chun SH, et al. (2009) The novel role of platelet-activating factor in protecting mice against lipopolysaccharide-induced endotoxic shock. PLoS One 4: e6503.
48. Sepulcre MP, Alcaraz-Pérez F, López-Muñoz A, Roca FJ, Meseguer J, et al. (2009) Evolution of lipopolysaccharide (LPS) recognition and signaling: fish TLR4 does not recognize LPS and negatively regulates NF-κB activation. J Immunol 182: 1836-1845.
49. Kubota K, Sakaki H, Imaizumi T, Nakagawa H, Kusumi A, et al. (2006) Retinoic acid-inducible gene-I is induced in gingival fibroblasts by lipopolysaccharide or poly IC: possible roles in interleukin-1β,-6 and-8 expression. Oral Microbiol Immunol 21: 399-406.
50. Su J, Zhu Z, Wang Y, Xiong F, Zou J, (2008) The cytomegalovirus promoter-driven short hairpin RNA constructs mediate effective RNA interference in zebrafish in vivo. Mar Biotechnol 10: 262-269.
51. Su J, Zhu Z, Wang Y, Zou J, Wang N, et al. (2009) Grass carp reovirus activates RNAi pathway in rare minnow, Gobiocypris rarus. Aquaculture 289: 1-5.
52. Su J, Zhang R, Dong J, Yang C, (2011) Evaluation of internal control genes for qRT-PCR normalization in tissues and cell culture for antiviral studies of grass carp (Ctenopharyngodon idella). Fish Shellfish Immunol 30: 830-835.