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Volumn 30, Issue 3, 2011, Pages 936-943

Identification of a retinoic acid-inducible gene I from grass carp (Ctenopharyngodon idella) and expression analysis in vivo and in vitro

Author keywords

Gene cloning; Grass carp (Ctenopharyngodon idella); Grass carp reovirus; MRNA expression; RIG I

Indexed keywords

BACTERIA (MICROORGANISMS); CTENOPHARYNGODON; CTENOPHARYNGODON IDELLA; CYPRINIDAE; DNA VIRUSES; GRASS CARP REOVIRUS; ORTHOREOVIRUS; PISCES;

EID: 79952194676     PISSN: 10504648     EISSN: 10959947     Source Type: Journal    
DOI: 10.1016/j.fsi.2011.01.020     Document Type: Article
Times cited : (63)

References (32)
  • 1
    • 38449100111 scopus 로고    scopus 로고
    • Regulation of antiviral innate immune responses by RIG-I family of RNA helicases
    • Onomoto K., Yoneyama M., Fujita T. Regulation of antiviral innate immune responses by RIG-I family of RNA helicases. Curr Top Microbiol Immunol 2007, 316:193-205.
    • (2007) Curr Top Microbiol Immunol , vol.316 , pp. 193-205
    • Onomoto, K.1    Yoneyama, M.2    Fujita, T.3
  • 2
    • 63649108380 scopus 로고    scopus 로고
    • The roles of TLRs, RLRs and NLRs in pathogen recognition
    • Kawai T., Akira S. The roles of TLRs, RLRs and NLRs in pathogen recognition. Int Immunol 2009, 21:317-337.
    • (2009) Int Immunol , vol.21 , pp. 317-337
    • Kawai, T.1    Akira, S.2
  • 3
    • 56549116047 scopus 로고    scopus 로고
    • Toll-like receptor and RIG-I-like receptor signaling
    • Kawai T., Akira S. Toll-like receptor and RIG-I-like receptor signaling. Ann N Y Acad Sci 2008, 1143:1-20.
    • (2008) Ann N Y Acad Sci , vol.1143 , pp. 1-20
    • Kawai, T.1    Akira, S.2
  • 4
    • 61449248246 scopus 로고    scopus 로고
    • An RIG-I-Like RNA helicase mediates antiviral RNAi downstream of viral siRNA biogenesis in Caenorhabditis elegans
    • e1000286
    • Lu R., Yigit E., Li W.X., Ding S.W. An RIG-I-Like RNA helicase mediates antiviral RNAi downstream of viral siRNA biogenesis in Caenorhabditis elegans. PLoS Pathog 2009, 5. e1000286.
    • (2009) PLoS Pathog , vol.5
    • Lu, R.1    Yigit, E.2    Li, W.X.3    Ding, S.W.4
  • 5
    • 67650510680 scopus 로고    scopus 로고
    • Solution structures of cytosolic RNA sensor MDA5 and LGP2 C-terminal domains: identification of the RNA recognition loop in RIG-I-like receptors
    • Takahasi K., Kumeta H., Tsuduki N., Narita R., Shigemoto T., Hirai R., et al. Solution structures of cytosolic RNA sensor MDA5 and LGP2 C-terminal domains: identification of the RNA recognition loop in RIG-I-like receptors. J Biol Chem 2009, 284:17465-17474.
    • (2009) J Biol Chem , vol.284 , pp. 17465-17474
    • Takahasi, K.1    Kumeta, H.2    Tsuduki, N.3    Narita, R.4    Shigemoto, T.5    Hirai, R.6
  • 6
    • 70349459734 scopus 로고    scopus 로고
    • RIG-I-dependent sensing of poly(dA:dT) through the induction of an RNA polymerase III-transcribed RNA intermediate
    • Ablasser A., Bauernfeind F., Hartmann G., Latz E., Fitzgerald K.A., Hornung V. RIG-I-dependent sensing of poly(dA:dT) through the induction of an RNA polymerase III-transcribed RNA intermediate. Nat Immunol 2009, 10:1065-1072.
    • (2009) Nat Immunol , vol.10 , pp. 1065-1072
    • Ablasser, A.1    Bauernfeind, F.2    Hartmann, G.3    Latz, E.4    Fitzgerald, K.A.5    Hornung, V.6
  • 7
    • 70449584559 scopus 로고    scopus 로고
    • A selective contribution of the RIG-I-like receptor pathway to type I interferon responses activated by cytosolic DNA
    • Choi M.K., Wang Z., Ban T., Yanai H., Lu Y., Koshiba R., et al. A selective contribution of the RIG-I-like receptor pathway to type I interferon responses activated by cytosolic DNA. Proc Natl Acad Sci USA 2009, 106:17870-17875.
    • (2009) Proc Natl Acad Sci USA , vol.106 , pp. 17870-17875
    • Choi, M.K.1    Wang, Z.2    Ban, T.3    Yanai, H.4    Lu, Y.5    Koshiba, R.6
  • 8
    • 77949422543 scopus 로고    scopus 로고
    • Phosphorylation-mediated negative regulation of RIG-I antiviral activity
    • Gack M.U., Nistal-Villan E., Inn K.-S., Garcia-Sastre A., Jung J.U. Phosphorylation-mediated negative regulation of RIG-I antiviral activity. J Virol 2010, 84:3220-3229.
    • (2010) J Virol , vol.84 , pp. 3220-3229
    • Gack, M.U.1    Nistal-Villan, E.2    Inn, K.-S.3    Garcia-Sastre, A.4    Jung, J.U.5
  • 9
    • 70449568252 scopus 로고    scopus 로고
    • Study of human RIG-I polymorphisms identifies two variants with an opposite impact on the antiviral immune response
    • e7582
    • Pothlichet J., Burtey A., Kubarenko A.V., Caignard G., Solhonne B., Tangy F., et al. Study of human RIG-I polymorphisms identifies two variants with an opposite impact on the antiviral immune response. PLoS One 2009, 4. e7582.
    • (2009) PLoS One , vol.4
    • Pothlichet, J.1    Burtey, A.2    Kubarenko, A.V.3    Caignard, G.4    Solhonne, B.5    Tangy, F.6
  • 10
    • 75749140581 scopus 로고    scopus 로고
    • RIG-I detects viral genomic RNA during negative-strand RNA virus infection
    • Rehwinkel J., Tan C.P., Goubau D., Schulz O., Pichlmair A., Bier K., et al. RIG-I detects viral genomic RNA during negative-strand RNA virus infection. Cell 2010, 140:397-408.
    • (2010) Cell , vol.140 , pp. 397-408
    • Rehwinkel, J.1    Tan, C.P.2    Goubau, D.3    Schulz, O.4    Pichlmair, A.5    Bier, K.6
  • 11
    • 77957997708 scopus 로고    scopus 로고
    • Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing
    • Baum A., Sachidanandam R., Garcia-Sastre A. Preference of RIG-I for short viral RNA molecules in infected cells revealed by next-generation sequencing. Proc Natl Acad Sci USA 2010, 107:16303-16308.
    • (2010) Proc Natl Acad Sci USA , vol.107 , pp. 16303-16308
    • Baum, A.1    Sachidanandam, R.2    Garcia-Sastre, A.3
  • 12
    • 33947206046 scopus 로고    scopus 로고
    • Cutting edge: influenza a virus activates TLR3-dependent inflammatory and RIG-I-dependent antiviral responses in human lung epithelial cells
    • Le Goffic R., Pothlichet J., Vitour D., Fujita T., Meurs E., Chignard M., et al. Cutting edge: influenza a virus activates TLR3-dependent inflammatory and RIG-I-dependent antiviral responses in human lung epithelial cells. J Immunol 2007, 178:3368-3372.
    • (2007) J Immunol , vol.178 , pp. 3368-3372
    • Le Goffic, R.1    Pothlichet, J.2    Vitour, D.3    Fujita, T.4    Meurs, E.5    Chignard, M.6
  • 13
    • 77954242369 scopus 로고    scopus 로고
    • The chase for the RIG-I ligand-recent advances
    • Schlee M., Hartmann G. The chase for the RIG-I ligand-recent advances. Mol Ther 2010, 18:1254-1262.
    • (2010) Mol Ther , vol.18 , pp. 1254-1262
    • Schlee, M.1    Hartmann, G.2
  • 14
    • 68549132515 scopus 로고    scopus 로고
    • An essential role for RIG-I in toll-like receptor-stimulated phagocytosis
    • Kong L., Sun L., Zhang H., Liu Q., Liu Y., Qin L., et al. An essential role for RIG-I in toll-like receptor-stimulated phagocytosis. Cell Host Microbe 2009, 6:150-161.
    • (2009) Cell Host Microbe , vol.6 , pp. 150-161
    • Kong, L.1    Sun, L.2    Zhang, H.3    Liu, Q.4    Liu, Y.5    Qin, L.6
  • 15
    • 67749111851 scopus 로고    scopus 로고
    • Mitochondrial antiviral signaling protein plays a major role in induction of the fish innate immune response against RNA and DNA viruses
    • Biacchesi S., LeBerre M., Lamoureux A., Louise Y., Lauret E., Boudinot P., et al. Mitochondrial antiviral signaling protein plays a major role in induction of the fish innate immune response against RNA and DNA viruses. J Virol 2009, 83:7815-7827.
    • (2009) J Virol , vol.83 , pp. 7815-7827
    • Biacchesi, S.1    LeBerre, M.2    Lamoureux, A.3    Louise, Y.4    Lauret, E.5    Boudinot, P.6
  • 16
    • 45949089813 scopus 로고    scopus 로고
    • Zebrafish TRIF, a golgi-localized protein, participates in IFN induction and NF-κB activation
    • Fan S., Chen S., Liu Y., Lin Y., Liu H., Guo L., et al. Zebrafish TRIF, a golgi-localized protein, participates in IFN induction and NF-κB activation. J Immunol 2008, 180:5373-5383.
    • (2008) J Immunol , vol.180 , pp. 5373-5383
    • Fan, S.1    Chen, S.2    Liu, Y.3    Lin, Y.4    Liu, H.5    Guo, L.6
  • 17
    • 55949083181 scopus 로고    scopus 로고
    • Evolution of MDA-5/RIG-I-dependent innate immunity: independent evolution by domain grafting
    • Sarkar D., DeSalle R., Fisher P.B. Evolution of MDA-5/RIG-I-dependent innate immunity: independent evolution by domain grafting. Proc Natl Acad Sci USA 2008, 105:17040-17045.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 17040-17045
    • Sarkar, D.1    DeSalle, R.2    Fisher, P.B.3
  • 18
    • 66249094862 scopus 로고    scopus 로고
    • Origin and evolution of the RIG-I like RNA helicase gene family
    • Zou J., Chang M., Nie P., Secombes C.J. Origin and evolution of the RIG-I like RNA helicase gene family. BMC Evol Biol 2009, 9:85.
    • (2009) BMC Evol Biol , vol.9 , pp. 85
    • Zou, J.1    Chang, M.2    Nie, P.3    Secombes, C.J.4
  • 20
    • 34547781750 scopus 로고    scopus 로고
    • MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0
    • Tamura K., Dudley J., Nei M., Kumar S. MEGA4: molecular evolutionary genetics analysis (MEGA) software version 4.0. Mol Biol Evol 2007, 24:1596-1599.
    • (2007) Mol Biol Evol , vol.24 , pp. 1596-1599
    • Tamura, K.1    Dudley, J.2    Nei, M.3    Kumar, S.4
  • 21
    • 77949919096 scopus 로고    scopus 로고
    • Molecular cloning and immune responsive expression of MDA5 gene, a pivotal member of the RLR gene family from grass carp Ctenopharyngodon idella
    • Su J., Huang T., Dong J., Heng J., Zhang R., Peng L. Molecular cloning and immune responsive expression of MDA5 gene, a pivotal member of the RLR gene family from grass carp Ctenopharyngodon idella. Fish Shellfish Immunol 2010, 28:712-718.
    • (2010) Fish Shellfish Immunol , vol.28 , pp. 712-718
    • Su, J.1    Huang, T.2    Dong, J.3    Heng, J.4    Zhang, R.5    Peng, L.6
  • 22
    • 0035710746 scopus 로고    scopus 로고
    • Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method
    • Livak K.J., Schmittgen T.D. Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) method. Methods 2001, 25:402-408.
    • (2001) Methods , vol.25 , pp. 402-408
    • Livak, K.J.1    Schmittgen, T.D.2
  • 23
    • 0042307304 scopus 로고    scopus 로고
    • Viral infection switches non-plasmacytoid dendritic cells into high interferon producers
    • Diebold S.S., Montoya M., Unger H., Alexopoulou L., Roy P., Haswell L.E., et al. Viral infection switches non-plasmacytoid dendritic cells into high interferon producers. Nature 2003, 424:324-328.
    • (2003) Nature , vol.424 , pp. 324-328
    • Diebold, S.S.1    Montoya, M.2    Unger, H.3    Alexopoulou, L.4    Roy, P.5    Haswell, L.E.6
  • 24
    • 13844250588 scopus 로고    scopus 로고
    • RIG-I: an essential regulator of virus-induced interferon production
    • Heim M.H. RIG-I: an essential regulator of virus-induced interferon production. J Hepatol 2005, 42:431-433.
    • (2005) J Hepatol , vol.42 , pp. 431-433
    • Heim, M.H.1
  • 25
    • 77955481642 scopus 로고    scopus 로고
    • The structural basis of 5′ triphosphate double-stranded RNA recognition by RIG-I C-terminal domain
    • Lu C., Xu H., Ranjith-Kumar C.T., Brooks M.T., Hou T.Y., Hu F., et al. The structural basis of 5′ triphosphate double-stranded RNA recognition by RIG-I C-terminal domain. Structure 2010, 18:1032-1043.
    • (2010) Structure , vol.18 , pp. 1032-1043
    • Lu, C.1    Xu, H.2    Ranjith-Kumar, C.T.3    Brooks, M.T.4    Hou, T.Y.5    Hu, F.6
  • 26
    • 33645214581 scopus 로고    scopus 로고
    • Tumor necrosis factor alpha enhances influenza a virus-induced expression of antiviral cytokines by activating RIG-I gene expression
    • Matikainen S., Siren J., Tissari J., Veckman V., Pirhonen J., Severa M., et al. Tumor necrosis factor alpha enhances influenza a virus-induced expression of antiviral cytokines by activating RIG-I gene expression. J Virol 2006, 80:3515-3522.
    • (2006) J Virol , vol.80 , pp. 3515-3522
    • Matikainen, S.1    Siren, J.2    Tissari, J.3    Veckman, V.4    Pirhonen, J.5    Severa, M.6
  • 27
    • 33846307026 scopus 로고    scopus 로고
    • Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2
    • Saito T., Hirai R., Loo Y.-M., Owen D., Johnson C.L., Sinha S.C., et al. Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2. Proc Natl Acad Sci USA 2007, 104:582-587.
    • (2007) Proc Natl Acad Sci USA , vol.104 , pp. 582-587
    • Saito, T.1    Hirai, R.2    Loo, Y.-M.3    Owen, D.4    Johnson, C.L.5    Sinha, S.C.6
  • 30
    • 77956195791 scopus 로고    scopus 로고
    • A common polymorphism in the caspase recruitment domain of RIG-I modifies the innate immune response of human dendritic cells
    • Hu J., Nistal-Villan E., Voho A., Ganee A., Kumar M., Ding Y., et al. A common polymorphism in the caspase recruitment domain of RIG-I modifies the innate immune response of human dendritic cells. J Immunol 2010, 185:424-432.
    • (2010) J Immunol , vol.185 , pp. 424-432
    • Hu, J.1    Nistal-Villan, E.2    Voho, A.3    Ganee, A.4    Kumar, M.5    Ding, Y.6
  • 31
    • 55949131282 scopus 로고    scopus 로고
    • Roles of RIG-I N-terminal tandem CARD and splice variant in TRIM25-mediated antiviral signal transduction
    • Gack M.U., Kirchhofer A., Shin Y.C., Inn K.S., Liang C., Cui S., et al. Roles of RIG-I N-terminal tandem CARD and splice variant in TRIM25-mediated antiviral signal transduction. Proc Natl Acad Sci USA 2008, 105:16743-16748.
    • (2008) Proc Natl Acad Sci USA , vol.105 , pp. 16743-16748
    • Gack, M.U.1    Kirchhofer, A.2    Shin, Y.C.3    Inn, K.S.4    Liang, C.5    Cui, S.6
  • 32
    • 67649421085 scopus 로고    scopus 로고
    • Expression of RIG-I, IRF3, IFN-beta and IRF7 determines resistance or susceptibility of cells to infection by Newcastle disease virus
    • Wilden H., Fournier P., Zawatzky R., Schirrmacher V. Expression of RIG-I, IRF3, IFN-beta and IRF7 determines resistance or susceptibility of cells to infection by Newcastle disease virus. Int J Oncol 2009, 34:971-982.
    • (2009) Int J Oncol , vol.34 , pp. 971-982
    • Wilden, H.1    Fournier, P.2    Zawatzky, R.3    Schirrmacher, V.4


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