-
1
-
-
58049215518
-
Approaching the RNA ligand for RIG-I?
-
Schlee, M. et al. Approaching the RNA ligand for RIG-I? Immunol. Rev. 227, 66-74 (2009).
-
(2009)
Immunol. Rev.
, vol.227
, pp. 66-74
-
-
Schlee, M.1
-
2
-
-
47949092573
-
Innate immunity induced by composition-dependent RIG-I recognition of hepatitis C virus RNA
-
Saito, T., Owen, D. M., Jiang, F., Marcotrigiano, J. & Gale, M. Innate immunity induced by composition-dependent RIG-I recognition of hepatitis C virus RNA. Nature 454, 523-527 (2008).
-
(2008)
Nature
, vol.454
, pp. 523-527
-
-
Saito, T.1
Owen, D.M.2
Jiang, F.3
Marcotrigiano, J.4
Gale, M.5
-
3
-
-
66149114745
-
Nucleotide sequences and modifications that determine RIGI/RNA binding and signaling activities
-
Uzri, D. & Gehrke, L. Nucleotide sequences and modifications that determine RIGI/RNA binding and signaling activities. J. Virol. 83, 4174-4184 (2009).
-
(2009)
J. Virol.
, vol.83
, pp. 4174-4184
-
-
Uzri, D.1
Gehrke, L.2
-
4
-
-
78650048628
-
Function and regulation of retinoic acid-inducible gene-I
-
Matsumiya, T. & Stafforini, D. M. Function and regulation of retinoic acid-inducible gene-I. Crit. Rev. Immunol. 30, 489-513 (2010).
-
(2010)
Crit. Rev. Immunol.
, vol.30
, pp. 489-513
-
-
Matsumiya, T.1
Stafforini, D.M.2
-
5
-
-
77952578865
-
Viral apoptosis is induced by IRF-3-mediated activation of Bax
-
Chattopadhyay, S. et al. Viral apoptosis is induced by IRF-3-mediated activation of Bax. EMBO J. 29, 1762-1773 (2010).
-
(2010)
EMBO J.
, vol.29
, pp. 1762-1773
-
-
Chattopadhyay, S.1
-
6
-
-
78650665171
-
Phosphorylation of RIG-I by casein kinase II inhibits its antiviral response
-
Sun, Z., Ren, H., Liu, Y., Teeling, J. L. & Gu, J. Phosphorylation of RIG-I by casein kinase II inhibits its antiviral response. J. Virol. 85, 1036-1047 (2011).
-
(2011)
J. Virol.
, vol.85
, pp. 1036-1047
-
-
Sun, Z.1
Ren, H.2
Liu, Y.3
Teeling, J.L.4
Gu, J.5
-
7
-
-
34547960175
-
Small self-RNA generated by RNase L amplifies antiviral innate immunity
-
DOI 10.1038/nature06042, PII NATURE06042
-
Malathi, K., Dong, B., Gale, M. Jr & Silverman, R. H. Small self-RNA generated by RNase L amplifies antiviral innate immunity. Nature 448, 816-819 (2007). (Pubitemid 47266340)
-
(2007)
Nature
, vol.448
, Issue.7155
, pp. 816-819
-
-
Malathi, K.1
Dong, B.2
Gale Jr., M.3
Silverman, R.H.4
-
8
-
-
79952325540
-
Crystal structure of RIG-I C-terminal domain bound to blunt-ended double-strand RNA without 59 triphosphate
-
Lu, C., Ranjith-Kumar, C. T., Hao, L., Kao, C. C. & Li, P. Crystal structure of RIG-I C-terminal domain bound to blunt-ended double-strand RNA without 59 triphosphate. Nucleic Acids Res. 39, 1565-1575 (2011).
-
(2011)
Nucleic Acids Res.
, vol.39
, pp. 1565-1575
-
-
Lu, C.1
Ranjith-Kumar, C.T.2
Hao, L.3
Kao, C.C.4
Li, P.5
-
9
-
-
77955481642
-
The structural basis of 59 triphosphate double-stranded RNA recognition by RIG-I C-terminal domain
-
Lu, C. et al. The structural basis of 59 triphosphate double-stranded RNA recognition by RIG-I C-terminal domain. Structure 18, 1032-1043 (2010).
-
(2010)
Structure
, vol.18
, pp. 1032-1043
-
-
Lu, C.1
-
10
-
-
77954386541
-
Structural and functional insights into 59-ppp RNA pattern recognition by the innate immune receptor RIG-I
-
Wang, Y. et al. Structural and functional insights into 59-ppp RNA pattern recognition by the innate immune receptor RIG-I. Nature Struct. Mol. Biol. 17, 781-787 (2010).
-
(2010)
Nature Struct. Mol. Biol.
, vol.17
, pp. 781-787
-
-
Wang, Y.1
-
11
-
-
34548638261
-
Structure and mechanism of helicases and nucleic acid translocases
-
Singleton, M. R., Dillingham, M. S. & Wigley, D. B. Structure and mechanism of helicases and nucleic acid translocases. Annu. Rev. Biochem. 76, 23-50 (2007).
-
(2007)
Annu. Rev. Biochem.
, vol.76
, pp. 23-50
-
-
Singleton, M.R.1
Dillingham, M.S.2
Wigley, D.B.3
-
12
-
-
77955582184
-
SF1 and SF2 helicases: Family matters
-
Fairman-Williams, M. E., Guenther, U. P. & Jankowsky, E. SF1 and SF2 helicases: family matters. Curr. Opin. Struct. Biol. 20, 313-324 (2010).
-
(2010)
Curr. Opin. Struct. Biol.
, vol.20
, pp. 313-324
-
-
Fairman-Williams, M.E.1
Guenther, U.P.2
Jankowsky, E.3
-
13
-
-
18844457346
-
X-Ray structures of the sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA
-
DOI 10.1016/j.cell.2005.03.026, PII S0092867405002989
-
Dü rr, H., Korner, C., Muller, M., Hickmann, V.& Hopfner, K. P. X-ray structures of the Sulfolobus solfataricus SWI2/SNF2 ATPase core and its complex with DNA. Cell 121, 363-373 (2005). (Pubitemid 40692297)
-
(2005)
Cell
, vol.121
, Issue.3
, pp. 363-373
-
-
Durr, H.1
Korner, C.2
Muller, M.3
Hickmann, V.4
Hopfner, K.-P.5
-
14
-
-
60749124538
-
Cytosolic viral sensor RIG-I is a 59-triphosphate-dependent translocase on double-stranded RNA
-
Myong, S. et al. Cytosolic viral sensor RIG-I is a 59-triphosphate- dependent translocase on double-stranded RNA. Science 323, 1070-1074 (2009).
-
(2009)
Science
, vol.323
, pp. 1070-1074
-
-
Myong, S.1
-
15
-
-
39649092731
-
NonselfRNA-sensingmechanismof RIG-I helicase and activation of antiviral immune responses
-
Takahasi, K. et al.NonselfRNA-sensingmechanismof RIG-I helicase and activation of antiviral immune responses. Mol. Cell 29, 428-440 (2008).
-
(2008)
Mol. Cell
, vol.29
, pp. 428-440
-
-
Takahasi, K.1
-
16
-
-
76249111702
-
Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism
-
Gu, M. & Rice, C. M. Three conformational snapshots of the hepatitis C virus NS3 helicase reveal a ratchet translocation mechanism. Proc. Natl Acad. Sci. USA 107, 521-528 (2009).
-
(2009)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 521-528
-
-
Gu, M.1
Rice, C.M.2
-
17
-
-
0242582359
-
Two Novel Conserved Motifs in the Hepatitis C Virus NS3 Protein Critical for Helicase Action
-
DOI 10.1074/jbc.M306444200
-
Lam, A. M., Keeney, D. & Frick, D. N. Two novel conserved motifs in the hepatitis C virus NS3 protein critical for helicase action. J. Biol. Chem. 278, 44514-44524 (2003). (Pubitemid 37377204)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.45
, pp. 44514-44524
-
-
Lam, A.M.I.1
Keeney, D.2
Frick, D.N.3
-
18
-
-
33846307026
-
Regulation of innate antiviral defenses through a shared repressor domain in RIG-1 and LGP2
-
DOI 10.1073/pnas.0606699104
-
Saito, T. et al. Regulation of innate antiviral defenses through a shared repressor domain in RIG-I and LGP2. Proc. Natl Acad. Sci. USA 104, 582-587 (2007). (Pubitemid 46123068)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.2
, pp. 582-587
-
-
Saito, T.1
Hirai, R.2
Loo, Y.-M.3
Owen, D.4
Johnson, C.L.5
Sinha, S.C.6
Akira, S.7
Fujita, T.8
Gale Jr., M.9
-
19
-
-
37149049312
-
X-ray solution scattering (SAXS) combined with crystallography and computation: Defining accurate macromolecular structures, conformations and assemblies in solution
-
DOI 10.1017/S0033583507004635, PII S0033583507004635
-
Putnam, C. D., Hammel, M., Hura, G. L. & Tainer, J. A. X-ray solution scattering (SAXS) combined with crystallography and computation: defining accurate macromolecular structures, conformations and assemblies in solution. Q. Rev. Biophys. 40, 191-285 (2007). (Pubitemid 350261954)
-
(2007)
Quarterly Reviews of Biophysics
, vol.40
, Issue.3
, pp. 191-285
-
-
Putnam, C.D.1
Hammel, M.2
Hura, G.L.3
Tainer, J.A.4
-
20
-
-
0032562221
-
The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes
-
DOI 10.1021/bi9724319
-
Lorsch, J. R. & Herschlag, D. The DEAD box protein eIF4A. 2. A cycle of nucleotide and RNA-dependent conformational changes. Biochemistry 37, 2194-2206 (1998). (Pubitemid 28119292)
-
(1998)
Biochemistry
, vol.37
, Issue.8
, pp. 2194-2206
-
-
Lorsch, J.R.1
Herschlag, D.2
-
21
-
-
0037133527
-
Cooperative binding of ATP and RNA substrates to the DEAD/H protein DbpA
-
DOI 10.1021/bi012062n
-
Polach, K. J. & Uhlenbeck, O. C. Cooperative binding of ATP and RNA substrates to the DEAD/H protein DbpA. Biochemistry 41, 3693-3702 (2002). (Pubitemid 34224682)
-
(2002)
Biochemistry
, vol.41
, Issue.11
, pp. 3693-3702
-
-
Polach, K.J.1
Uhlenbeck, O.C.2
-
22
-
-
38649106732
-
Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase
-
DOI 10.1073/pnas.0705488105
-
Theissen, B., Karow, A. R., Kohler, J., Gubaev, A. & Klostermeier, D. Cooperative binding of ATP and RNA induces a closed conformation in a DEAD box RNA helicase. Proc. Natl Acad. Sci. USA 105, 548-553 (2008). (Pubitemid 351171745)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.2
, pp. 548-553
-
-
Theissen, B.1
Karow, A.R.2
Kohler, J.3
Gubaev, A.4
Klostermeier, D.5
-
23
-
-
33645805870
-
Viral and therapeutic control of IFN-b promoter stimulator 1 during hepatitis C virus infection
-
Loo, Y. M. et al. Viral and therapeutic control of IFN-b promoter stimulator 1 during hepatitis C virus infection. Proc. Natl Acad. Sci. USA 103, 6001-6006 (2006).
-
(2006)
Proc. Natl Acad. Sci. USA
, vol.103
, pp. 6001-6006
-
-
Loo, Y.M.1
-
24
-
-
27144440523
-
IPS-1, an adaptor triggering RIG-I- and Mda5-mediated type I interferon induction
-
DOI 10.1038/ni1243, PII N1243
-
Kawai, T. et al. IPS-1, an adaptor triggering RIG-I-and Mda5-mediated type I interferon induction. Nature Immunol. 6, 981-988 (2005). (Pubitemid 41486182)
-
(2005)
Nature Immunology
, vol.6
, Issue.10
, pp. 981-988
-
-
Kawai, T.1
Takahashi, K.2
Sato, S.3
Coban, C.4
Kumar, H.5
Kato, H.6
Ishii, K.J.7
Takeuchi, O.8
Akira, S.9
-
25
-
-
27144440476
-
Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus
-
DOI 10.1038/nature04193, PII N04193
-
Meylan, E. et al. Cardif is an adaptor protein in the RIG-I antiviral pathway and is targeted by hepatitis C virus. Nature 437, 1167-1172 (2005). (Pubitemid 41509355)
-
(2005)
Nature
, vol.437
, Issue.7062
, pp. 1167-1172
-
-
Meylan, E.1
Curran, J.2
Hofmann, K.3
Moradpour, D.4
Binder, M.5
Bartenschlager, R.6
Tschopp, J.7
-
26
-
-
24144461689
-
Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-κB and IRF3
-
DOI 10.1016/j.cell.2005.08.012, PII S0092867405008160
-
Seth, R. B., Sun, L., Ea, C. K. & Chen, Z. J. Identification and characterization of MAVS, a mitochondrial antiviral signaling protein that activates NF-kB and IRF 3. Cell 122, 669-682 (2005). (Pubitemid 41242633)
-
(2005)
Cell
, vol.122
, Issue.5
, pp. 669-682
-
-
Seth, R.B.1
Sun, L.2
Ea, C.-K.3
Chen, Z.J.4
-
27
-
-
24944538819
-
VISA is an adapter protein required for virus-triggered IFN-b signaling
-
Xu, L. G. et al. VISA is an adapter protein required for virus-triggered IFN-b signaling. Mol. Cell 19, 727-740 (2005).
-
(2005)
Mol. Cell
, vol.19
, pp. 727-740
-
-
Xu, L.G.1
-
28
-
-
34247341367
-
TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-I-mediated antiviral activity
-
DOI 10.1038/nature05732, PII NATURE05732
-
Gack, M. U. et al. TRIM25 RING-finger E3 ubiquitin ligase is essential for RIG-Imediated antiviral activity. Nature 446, 916-920 (2007). (Pubitemid 46633167)
-
(2007)
Nature
, vol.446
, Issue.7138
, pp. 916-920
-
-
Gack, M.U.1
Shin, Y.C.2
Joo, C.-H.3
Urano, T.4
Liang, C.5
Sun, L.6
Takeuchi, O.7
Akira, S.8
Chen, Z.9
Inoue, S.10
Jung, J.U.11
-
29
-
-
79960990301
-
Molecular mechanism of signal perception and integration by the innateimmune sensor retinoic acid inducible gene-I (RIG-I)
-
Binder, M. et al. Molecular mechanism of signal perception and integration by the innateimmune sensor retinoic acid inducible gene-I (RIG-I). J. Biol. Chem., (2011).
-
(2011)
J. Biol. Chem.
-
-
Binder, M.1
-
30
-
-
28944439650
-
Extended upstream A-T sequence increases T7 promoter strength
-
DOI 10.1074/jbc.M508013200
-
Tang, G. Q., Bandwar, R. P. & Patel, S. S. Extended upstream A-T sequence increases T7 promoter strength. J. Biol. Chem. 280, 40707-40713 (2005). (Pubitemid 41782232)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.49
, pp. 40707-40713
-
-
Tang, G.-Q.1
Bandwar, R.P.2
Patel, S.S.3
-
31
-
-
28944439650
-
Extended upstream A-T sequence increases T7 promoter strength
-
DOI 10.1074/jbc.M508013200
-
Tang, G. Q., Bandwar, R. P. & Patel, S. S. Extended upstream A-T sequence increases T7 promoter strength. J. Biol. Chem. 280, 40707-40713 (2005). (Pubitemid 41782232)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.49
, pp. 40707-40713
-
-
Tang, G.-Q.1
Bandwar, R.P.2
Patel, S.S.3
-
32
-
-
79953737180
-
Overview of the CCP4 suite and current developments
-
Winn, M. D. et al. Overview of the CCP4 suite and current developments. Acta Crystallogr. D 67, 235-242 (2011).
-
(2011)
Acta Crystallogr. D
, vol.67
, pp. 235-242
-
-
Winn, M.D.1
-
34
-
-
13244281317
-
Model-building tools for molecular graphics
-
Emsley, P. & Cowtan, K. Coot: model-building tools for molecular graphics. Acta Crystallogr. D 60, 2126-2132 (2004).
-
(2004)
Acta Crystallogr. D
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Coot, C.K.2
-
35
-
-
76449098262
-
PHENIX: A comprehensive Python-based system for macromolecular structure solution
-
Adams, P. D. et al. PHENIX: a comprehensive Python-based system for macromolecular structure solution. Acta Crystallogr D 66, 213-221 (2010).
-
(2010)
Acta Crystallogr D
, vol.66
, pp. 213-221
-
-
Adams, P.D.1
-
36
-
-
0141484613
-
PRIMUS: A Windows PC-based system for small-angle scattering data analysis
-
Konarev, P. V., Volkov, V. V., Sokolova, A. V., Koch, M. H. & Svergun, D. I. PRIMUS: a Windows PC-based system for small-angle scattering data analysis. J. Appl. Cryst. 36, 1277-1282 (2003).
-
(2003)
J. Appl. Cryst.
, vol.36
, pp. 1277-1282
-
-
Konarev, P.V.1
Volkov, V.V.2
Sokolova, A.V.3
Koch, M.H.4
Svergun, D.I.5
-
37
-
-
0026244044
-
GNOM: A program package for small-angle scattering data processing
-
Semenyuk, A. V. & Svergun, D. I. GNOM: a program package for small-angle scattering data processing. J. Appl. Cryst. 24, 537-540 (1991).
-
(1991)
J. Appl. Cryst.
, vol.24
, pp. 537-540
-
-
Semenyuk, A.V.1
Svergun, D.I.2
-
38
-
-
0033001996
-
Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing
-
Svergun, D. I. Restoring low resolution structure of biological macromolecules from solution scattering using simulated annealing. Biophys. J. 76, 2879-2886 (1999). (Pubitemid 29269438)
-
(1999)
Biophysical Journal
, vol.76
, Issue.6
, pp. 2879-2886
-
-
Svergun, D.I.1
-
39
-
-
0037701585
-
Uniqueness of ab initio shape determination in smallangle scattering
-
Volkov, V. V. & Svergun, D. I. Uniqueness of ab initio shape determination in smallangle scattering. J. Appl. Cryst. 36, 860-864 (2003).
-
(2003)
J. Appl. Cryst.
, vol.36
, pp. 860-864
-
-
Volkov, V.V.1
Svergun, D.I.2
-
40
-
-
23244455562
-
Global rigid body modeling of macromolecular complexes against small-angle scattering data
-
DOI 10.1529/biophysj.105.064154
-
Petoukhov, M. V. & Svergun, D. I. Global rigid body modeling of macromolecular complexes against small-angle scattering data. Biophys. J. 89, 1237-1250 (2005). (Pubitemid 41099005)
-
(2005)
Biophysical Journal
, vol.89
, Issue.2
, pp. 1237-1250
-
-
Petoukhov, M.V.1
Svergun, D.I.2
-
41
-
-
34247891557
-
Structural characterization of flexible proteins using small-angle X-ray scattering
-
DOI 10.1021/ja069124n
-
Bernadó, P., Mylonas, E., Petoukhov, M. V., Blackledge, M.&Svergun, D. I. Structural characterization of flexible proteins using small-angle X-ray scattering. J. Am. Chem. Soc. 129, 5656-5664 (2007). (Pubitemid 46697655)
-
(2007)
Journal of the American Chemical Society
, vol.129
, Issue.17
, pp. 5656-5664
-
-
Bernado, P.1
Mylonas, E.2
Petoukhov, M.V.3
Blackledge, M.4
Svergun, D.I.5
-
42
-
-
37249005205
-
The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability
-
DOI 10.1038/nprot.2007.321, PII NPROT.2007.321
-
Niesen, F. H., Berglund, H.& Vedadi, M. The use of differential scanning fluorimetry to detect ligand interactions that promote protein stability. Nature Protocols 2, 2212-2221 (2007). (Pubitemid 351565860)
-
(2007)
Nature Protocols
, vol.2
, Issue.9
, pp. 2212-2221
-
-
Niesen, F.H.1
Berglund, H.2
Vedadi, M.3
|