-
1
-
-
10744226166
-
Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors
-
DOI 10.1093/nar/gkg881
-
Klumpp, K., Hang, J. Q., Rajendran, S., Yang, Y., Derosier, A., Wong Kai In, P., Overton, H., Parkes, K. E., Cammack, N., and Martin, J. A. (2003) Two-metal ion mechanism of RNA cleavage by HIV RNase H and mechanism-based design of selective HIV RNase H inhibitors. Nucleic Acids Res. 31, 6852-6859 (Pubitemid 37508792)
-
(2003)
Nucleic Acids Research
, vol.31
, Issue.23
, pp. 6852-6859
-
-
Klumpp, K.1
Hang, J.Q.2
Rajendran, S.3
Yang, Y.4
Derosier, A.5
Kai, I.P.W.6
Overton, H.7
Parkes, K.E.B.8
Cammack, N.9
Martin, J.A.10
-
2
-
-
33646497669
-
Recent progress in the design of small molecule inhibitors of HIV RNase H
-
Klumpp, K., and Mirzadegan, T. (2006) Recent progress in the design of small molecule inhibitors of HIV RNase H. Curr. Pharm. Des. 12, 1909-1922
-
(2006)
Curr. Pharm. Des.
, vol.12
, pp. 1909-1922
-
-
Klumpp, K.1
Mirzadegan, T.2
-
3
-
-
37249062449
-
HIV-1 reverse transcriptase structure with RNase H inhibitor dihydroxy benzoyl naphthyl hydrazone bound at a novel site
-
Himmel, D. M., Sarafianos, S. G., Dharmasena, S., Hossain, M. M., Mc-Coy-Simandle, K., Ilina, T., Clark, A. D., Jr., Knight, J. L., Julias, J. G., Clark, P. K., Krogh-Jespersen, K., Levy, R. M., Hughes, S. H., Parniak, M. A., and Arnold, E. (2006) HIV-1 reverse transcriptase structure with RNase H inhibitor dihydroxy benzoyl naphthyl hydrazone bound at a novel site. ACS Chem. Biol. 1, 702-712
-
(2006)
ACS Chem. Biol.
, vol.1
, pp. 702-712
-
-
Himmel, D.M.1
Sarafianos, S.G.2
Dharmasena, S.3
Hossain, M.M.4
Mc-Coy-Simandle, K.5
Ilina, T.6
Clark Jr., A.D.7
Knight, J.L.8
Julias, J.G.9
Clark, P.K.10
Krogh-Jespersen, K.11
Levy, R.M.12
Hughes, S.H.13
Parniak, M.A.14
Arnold, E.15
-
4
-
-
13444257639
-
Dissecting the effects of DNA polymerase and ribonuclease H inhibitor combinations on HIV-1 reverse-transcriptase activities
-
DOI 10.1021/bi0486740
-
Shaw-Reid, C. A., Feuston, B., Munshi, V., Getty, K., Krueger, J., Hazuda, D. J., Parniak, M. A., Miller, M. D., and Lewis, D. (2005) Dissecting the effects of DNA polymerase and ribonuclease H inhibitor combinations on HIV-1 reverse transcriptase activities. Biochemistry 44, 1595-1606 (Pubitemid 40204402)
-
(2005)
Biochemistry
, vol.44
, Issue.5
, pp. 1595-1606
-
-
Shaw-Reid, C.A.1
Feuston, B.2
Munshi, V.3
Getty, K.4
Krueger, J.5
Hazuda, D.J.6
Parniak, M.A.7
Miller, M.D.8
Lewis, D.9
-
5
-
-
0037474193
-
Inhibition of HIV-1 ribonuclease H by a novel diketo acid, 4-[5-(benzoylamino)thien-2-yl]-2,4-dioxobutanoic acid
-
DOI 10.1074/jbc.C200621200
-
Shaw-Reid, C. A., Munshi, V., Graham, P., Wolfe, A., Witmer, M., Danzeisen, R., Olsen, D. B., Carroll, S. S., Embrey, M., Wai, J. S., Miller, M. D., Cole, J. L., and Hazuda, D. J. (2003) Inhibition of HIV-1 ribonuclease H by a novel diketo acid, 4-[5-(benzoylamino)thien-2-yl]-2,4-dioxobutanoic acid. J. Biol. Chem. 278, 2777-2780 (Pubitemid 36801178)
-
(2003)
Journal of Biological Chemistry
, vol.278
, Issue.5
, pp. 2777-2780
-
-
Shaw-Reid, C.A.1
Munshi, V.2
Graham, P.3
Wolfe, A.4
Witmer, M.5
Danzeisen, R.6
Olsen, D.B.7
Carroll, S.S.8
Embrey, M.9
Wai, J.S.10
Miller, M.D.11
Cole, J.L.12
Hazuda, D.J.13
-
6
-
-
77954521861
-
Structural basis for the inhibition of RNase H activity of HIV-1 reverse transcriptase by RNase H active site-directed inhibitors
-
Su, H. P., Yan, Y., Prasad, G. S., Smith, R. F., Daniels, C. L., Abeywickrema, P. D., Reid, J. C., Loughran, H. M., Kornienko, M., Sharma, S., Grobler, J. A., Xu, B., Sardana, V., Allison, T. J., Williams, P. D., Darke, P. L., Hazuda, D. J., and Munshi, S. (2010) Structural basis for the inhibition of RNase H activity of HIV-1 reverse transcriptase by RNase H active site-directed inhibitors. J. Virol. 84, 7625-7633
-
(2010)
J. Virol.
, vol.84
, pp. 7625-7633
-
-
Su, H.P.1
Yan, Y.2
Prasad, G.S.3
Smith, R.F.4
Daniels, C.L.5
Abeywickrema, P.D.6
Reid, J.C.7
Loughran, H.M.8
Kornienko, M.9
Sharma, S.10
Grobler, J.A.11
Xu, B.12
Sardana, V.13
Allison, T.J.14
Williams, P.D.15
Darke, P.L.16
Hazuda, D.J.17
Munshi, S.18
-
7
-
-
70349638920
-
RNase H active site inhibitors of human immunodeficiency virus type 1 reverse transcriptase: Design, biochemical activity, and structural information
-
Kirschberg, T. A., Balakrishnan, M., Squires, N. H., Barnes, T., Brendza, K. M., Chen, X., Eisenberg, E. J., Jin, W., Kutty, N., Leavitt, S., Liclican, A., Liu, Q., Liu, X., Mak, J., Perry, J. K., Wang, M., Watkins, W. J., and Lansdon, E. B. (2009) RNase H active site inhibitors of human immunodeficiency virus type 1 reverse transcriptase: design, biochemical activity, and structural information. J. Med. Chem. 52, 5781-5784
-
(2009)
J. Med. Chem.
, vol.52
, pp. 5781-5784
-
-
Kirschberg, T.A.1
Balakrishnan, M.2
Squires, N.H.3
Barnes, T.4
Brendza, K.M.5
Chen, X.6
Eisenberg, E.J.7
Jin, W.8
Kutty, N.9
Leavitt, S.10
Liclican, A.11
Liu, Q.12
Liu, X.13
Mak, J.14
Perry, J.K.15
Wang, M.16
Watkins, W.J.17
Lansdon, E.B.18
-
8
-
-
79956334444
-
Structural and binding analysis of pyrimidinol carboxylic acid and N-hydroxy quinazolinedione HIV-1 RNase H inhibitors
-
Lansdon, E. B., Liu, Q., Leavitt, S. A., Balakrishnan, M., Perry, J. K., Lancaster-Moyer, C., Kutty, N., Liu, X., Squires, N. H., Watkins, W. J., and Kirschberg, T. A. (2011) Structural and binding analysis of pyrimidinol carboxylic acid and N-hydroxy quinazolinedione HIV-1 RNase H inhibitors. Antimicrob. Agents Chemother. 55, 2905-2915
-
(2011)
Antimicrob. Agents Chemother.
, vol.55
, pp. 2905-2915
-
-
Lansdon, E.B.1
Liu, Q.2
Leavitt, S.A.3
Balakrishnan, M.4
Perry, J.K.5
Lancaster-Moyer, C.6
Kutty, N.7
Liu, X.8
Squires, N.H.9
Watkins, W.J.10
Kirschberg, T.A.11
-
9
-
-
20044387576
-
Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones
-
DOI 10.1093/nar/gki268
-
Budihas, S. R., Gorshkova, I., Gaidamakov, S., Wamiru, A., Bona, M. K., Parniak, M. A., Crouch, R. J., McMahon, J. B., Beutler, J. A., and Le Grice, S. F. (2005) Selective inhibition of HIV-1 reverse transcriptase-associated ribonuclease H activity by hydroxylated tropolones. Nucleic Acids Res. 33, 1249-1256 (Pubitemid 41439918)
-
(2005)
Nucleic Acids Research
, vol.33
, Issue.4
, pp. 1249-1256
-
-
Budihas, S.R.1
Gorshkova, I.2
Gaidamakov, S.3
Wamiru, A.4
Bona, M.K.5
Parniak, M.A.6
Crouch, R.J.7
McMahon, J.B.8
Beutler, J.A.9
Le, G.S.F.J.10
-
10
-
-
71049185147
-
Structure of HIV-1 reverse transcriptase with the inhibitor β-Thujaplicinol bound at the RNase H active site
-
Himmel, D. M., Maegley, K. A., Pauly, T. A., Bauman, J. D., Das, K., Dharia, C., Clark, A. D., Jr., Ryan, K., Hickey, M. J., Love, R. A., Hughes, S. H., Bergqvist, S., and Arnold, E. (2009) Structure of HIV-1 reverse transcriptase with the inhibitor β-Thujaplicinol bound at the RNase H active site. Structure 17, 1625-1635
-
(2009)
Structure
, vol.17
, pp. 1625-1635
-
-
Himmel, D.M.1
Maegley, K.A.2
Pauly, T.A.3
Bauman, J.D.4
Das, K.5
Dharia, C.6
Clark Jr., A.D.7
Ryan, K.8
Hickey, M.J.9
Love, R.A.10
Hughes, S.H.11
Bergqvist, S.12
Arnold, E.13
-
11
-
-
77956131587
-
Structure-activity analysis of vinylogous urea inhibitors of human immunodeficiency virus-encoded ribonuclease H
-
Chung, S., Wendeler, M., Rausch, J. W., Beilhartz, G., Gotte, M., O'Keefe, B. R., Bermingham, A., Beutler, J. A., Liu, S., Zhuang, X., and Le Grice, S. F. (2010) Structure-activity analysis of vinylogous urea inhibitors of human immunodeficiency virus-encoded ribonuclease H. Antimicrob. Agents Chemother. 54, 3913-3921
-
(2010)
Antimicrob. Agents Chemother.
, vol.54
, pp. 3913-3921
-
-
Chung, S.1
Wendeler, M.2
Rausch, J.W.3
Beilhartz, G.4
Gotte, M.5
O'Keefe, B.R.6
Bermingham, A.7
Beutler, J.A.8
Liu, S.9
Zhuang, X.10
Le Grice, S.F.11
-
12
-
-
43449118968
-
Dynamic binding orientations direct activity of HIV reverse transcriptase
-
DOI 10.1038/nature06941, PII NATURE06941
-
Abbondanzieri, E. A., Bokinsky, G., Rausch, J. W., Zhang, J. X., Le Grice, S. F., and Zhuang, X. (2008) Dynamic binding orientations direct activity of HIV reverse transcriptase. Nature 453, 184-189 (Pubitemid 351667984)
-
(2008)
Nature
, vol.453
, Issue.7192
, pp. 184-189
-
-
Abbondanzieri, E.A.1
Bokinsky, G.2
Rausch, J.W.3
Zhang, J.X.4
Le, G.S.F.J.5
Zhuang, X.6
-
13
-
-
0030596068
-
Crystal structures of 8-Cl and 9-Cl TIBO complexed with wild-type HIV-1 RT and 8-Cl TIBO complexed with the Tyr181Cys HIV-1 RT drug-resistant mutant
-
DOI 10.1006/jmbi.1996.0698
-
Das, K., Ding, J., Hsiou, Y., Clark, A. D., Jr., Moereels, H., Koymans, L., Andries, K., Pauwels, R., Janssen, P. A., Boyer, P. L., Clark, P., Smith, R. H., Jr., Kroeger Smith, M. B., Michejda, C. J., Hughes, S. H., and Arnold, E. (1996) Crystal structures of 8-Cl and 9-Cl TIBO complexed with wild-type HIV-1 RT and 8-Cl TIBO complexed with the Y181C HIV-1 RT drug-resistant mutant. J. Mol. Biol. 264, 1085-1100 (Pubitemid 27019494)
-
(1996)
Journal of Molecular Biology
, vol.264
, Issue.5
, pp. 1085-1100
-
-
Kalyan, D.1
Ding, J.2
Hsiou, Y.3
Clark Jr., A.D.4
Moereels, H.5
Koymans, L.6
Andries, K.7
Pauwels, R.8
Janssen, P.A.J.9
Boyer, P.L.10
Clark, P.11
Smith Jr., R.H.12
Kroeger, S.M.B.13
Michejda, C.J.14
Hughes, S.H.15
Arnold, E.16
-
14
-
-
13144282707
-
Structures of Tyr188Leu mutant and wild-type HIV-1 reverse transcriptase complexed with the non-nucleoside inhibitor HBY 097: Inhibitor flexibility is a useful design feature for reducing drug resistance
-
DOI 10.1006/jmbi.1998.2171
-
Hsiou, Y., Das, K., Ding, J., Clark, A. D., Jr., Kleim, J. P., Ros̈ner, M., Winkler, I., Riess, G., Hughes, S. H., and Arnold, E. (1998) Structures of Y188L mutant and wild-type HIV-1 reverse transcriptase complexed with the non-nucleoside inhibitor HBY 097: inhibitor flexibility is a useful design feature for reducing drug resistance. J. Mol. Biol. 284, 313-323 (Pubitemid 28542456)
-
(1998)
Journal of Molecular Biology
, vol.284
, Issue.2
, pp. 313-323
-
-
Hsiou, Y.1
Das, K.2
Ding, J.3
Clark Jr., A.D.4
Kleim, J.-P.5
Rosner, M.6
Winkler, I.7
Riess, G.8
Hughes, S.H.9
Arnold, E.10
-
15
-
-
2342620790
-
Roles of Conformational and Positional Adaptability in Structure-Based Design of TMC125-R165335 (Etravirine) and Related Non-nucleoside Reverse Transcriptase Inhibitors That Are Highly Potent and Effective against Wild-Type and Drug-Resistant HIV-1 Variants
-
DOI 10.1021/jm030558s
-
Das, K., Clark, A. D., Jr., Lewi, P. J., Heeres, J., De Jonge, M. R., Koymans, L. M., Vinkers, H. M., Daeyaert, F., Ludovici, D. W., Kukla, M. J., De Corte, B., Kavash, R. W., Ho, C. Y., Ye, H., Lichtenstein, M. A., Andries, K., Pauwels, R., De Béthune, M. P., Boyer, P. L., Clark, P., Hughes, S. H., Janssen, P. A., and Arnold, E. (2004) Roles of conformational and positional adaptability in structure-based design of TMC125-R165335 (etra-virine) and related non-nucleoside reverse transcriptase inhibitors that are highly potent and effective against wild-type and drug-resistant HIV-1 variants. J. Med. Chem. 47, 2550-2560 (Pubitemid 38580092)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.10
, pp. 2550-2560
-
-
Das, K.1
Clark Jr., A.D.2
Lewi, P.J.3
Heeres, J.4
De Jonge, M.R.5
Koymans, L.M.H.6
Vinkers, H.M.7
Daeyaert, F.8
Ludovici, D.W.9
Kukla, M.J.10
De Corte, B.11
Kavash, R.W.12
Ho, C.Y.13
Ye, H.14
Lichtenstein, M.A.15
Andries, K.16
Pauwels, R.17
De Bethune, M.-P.18
Boyer, P.L.19
Clark, P.20
Hughes, S.H.21
Janssen, P.A.J.22
Arnold, E.23
more..
-
16
-
-
9744258219
-
Crystallography and the design of anti-AIDS drugs: Conformational flexibility and positional adaptability are important in the design of non-nucleoside HIV-1 reverse transcriptase inhibitors
-
DOI 10.1016/j.pbiomolbio.2004.07.001, PII S0079610704000744, Structure-Guided Design of AIDS Antivirals
-
Das, K., Lewi, P. J., Hughes, S. H., and Arnold, E. (2005) Crystallography and the design of anti-AIDS drugs: conformational flexibility and positional adaptability are important in the design of non-nucleoside HIV-1 reverse transcriptase inhibitors. Prog. Biophys. Mol. Biol. 88, 209-231 (Pubitemid 39579659)
-
(2005)
Progress in Biophysics and Molecular Biology
, vol.88
, Issue.2
, pp. 209-231
-
-
Das, K.1
Lewi, P.J.2
Hughes, S.H.3
Arnold, E.4
-
17
-
-
20144372481
-
In search of a novel anti-HIV drug: Multidisciplinary coordination in the discovery of 4-[[4-[[4-[(1E)-2-cyanoethenyl]-2,6-dimethylphenyl]amino]-2- pyrimidinyl]amino]benzonitrile (R278474, rilpivirine)
-
DOI 10.1021/jm040840e
-
Janssen, P. A., Lewi, P. J., Arnold, E., Daeyaert, F., de Jonge, M., Heeres, J., Koymans, L., Vinkers, M., Guillemont, J., Pasquier, E., Kukla, M., Ludovici, D., Andries, K., de Béthune, M. P., Pauwels, R., Das, K., Clark, A. D., Jr., Frenkel, Y. V., Hughes, S. H., Medaer, B., De Knaep, F., Bohets, H., De Clerck, F., Lampo, A., Williams, P., and Stoffels, P. (2005) In search of a novel anti-HIV drug: multidisciplinary coordination in the discovery of 4-[[4-[[4-[(1E)-2-cyanoethenyl]-2,6-dimethylphenyl]amino]-2- pyrimidinyl] amino]benzonitrile (R278474, rilpivirine). J. Med. Chem. 48, 1901-1909 (Pubitemid 40396320)
-
(2005)
Journal of Medicinal Chemistry
, vol.48
, Issue.6
, pp. 1901-1909
-
-
Janssen, P.A.J.1
Lewi, P.J.2
Arnold, E.3
Daeyaert, F.4
De Jonge, M.5
Heeres, J.6
Koymans, L.7
Vinkers, M.8
Guillemont, J.9
Pasquier, E.10
Kukla, M.11
Ludovici, D.12
Andries, K.13
De Bethune, M.-P.14
Pauwels, R.15
Das, K.16
Clark Jr., A.D.17
Frenkel, Y.V.18
Hughes, S.H.19
Medaer, B.20
De Knaep, F.21
Bohets, H.22
De Clerck, F.23
Lampo, A.24
Williams, P.25
Stoffels, P.26
more..
-
18
-
-
40349091258
-
High-resolution structures of HIV-1 reverse transcriptase/TMC278 complexes: Strategic flexibility explains potency against resistance mutations
-
DOI 10.1073/pnas.0711209105
-
Das, K., Bauman, J. D., Clark, A. D., Jr., Frenkel, Y. V., Lewi, P. J., Shatkin, A. J., Hughes, S. H., and Arnold, E. (2008) High resolution structures of HIV-1 reverse transcriptase/TMC278 complexes: strategic flexibility explains potency against resistance mutations. Proc. Natl. Acad. Sci. U.S.A. 105, 1466-1471 (Pubitemid 351346537)
-
(2008)
Proceedings of the National Academy of Sciences of the United States of America
, vol.105
, Issue.5
, pp. 1466-1471
-
-
Das, K.1
Bauman, J.D.2
Clark Jr., A.D.3
Frenkel, Y.V.4
Lewi, P.J.5
Shatkin, A.J.6
Hughes, S.H.7
Arnold, E.8
-
19
-
-
70350066155
-
Crystallographic study of a novel subnanomolar inhibitor provides insight on the binding interactions of alkenyldiarylmethanes with human immunodeficiency virus-1 reverse transcriptase
-
Cullen, M. D., Ho, W. C., Bauman, J. D., Das, K., Arnold, E., Hartman, T. L., Watson, K. M., Buckheit, R. W., Pannecouque, C., De Clercq, E., and Cushman, M. (2009) Crystallographic study of a novel subnanomolar inhibitor provides insight on the binding interactions of alkenyldiarylmethanes with human immunodeficiency virus-1 reverse transcriptase. J. Med. Chem. 52, 6467-6473
-
(2009)
J. Med. Chem.
, vol.52
, pp. 6467-6473
-
-
Cullen, M.D.1
Ho, W.C.2
Bauman, J.D.3
Das, K.4
Arnold, E.5
Hartman, T.L.6
Watson, K.M.7
Buckheit, R.W.8
Pannecouque, C.9
De Clercq, E.10
Cushman, M.11
-
20
-
-
58149160464
-
Vinylogous ureas as a novel class of inhibitors of reverse transcriptase-associated ribonuclease H activity
-
Wendeler, M., Lee, H. F., Bermingham, A., Miller, J. T., Chertov, O., Bona, M. K., Baichoo, N. S., Ehteshami, M., Beutler, J., O'Keefe, B. R., Götte, M., Kvaratskhelia, M., and Le Grice, S. (2008) Vinylogous ureas as a novel class of inhibitors of reverse transcriptase-associated ribonuclease H activity. ACS Chem. Biol. 3, 635-644
-
(2008)
ACS Chem. Biol.
, vol.3
, pp. 635-644
-
-
Wendeler, M.1
Lee, H.F.2
Bermingham, A.3
Miller, J.T.4
Chertov, O.5
Bona, M.K.6
Baichoo, N.S.7
Ehteshami, M.8
Beutler, J.9
O'Keefe, B.R.10
Götte, M.11
Kvaratskhelia, M.12
Le Grice, S.13
-
21
-
-
0030962706
-
Mutations in HIV reverse transcriptase which alter RNase H activity and decrease strand transfer efficiency are suppressed by HIV nucleocapsid protein
-
DOI 10.1073/pnas.94.13.6700
-
Cameron, C. E., Ghosh, M., Le Grice, S. F., and Benkovic, S. J. (1997) Mutations in HIV reverse transcriptase which alter RNase H activity and decrease strand transfer efficiency are suppressed by HIV nucleocapsid protein. Proc. Natl. Acad. Sci. U.S.A. 94, 6700-6705 (Pubitemid 27281927)
-
(1997)
Proceedings of the National Academy of Sciences of the United States of America
, vol.94
, Issue.13
, pp. 6700-6705
-
-
Cameron, C.E.1
Ghosh, M.2
Le, G.S.F.J.3
Benkovic, S.J.4
-
22
-
-
0026070438
-
Subunit-selective mutagenesis indicates minimal polymerase activity in heterodimer-associated p51 HIV-1 reverse transcriptase
-
Le Grice, S. F., Naas, T., Wohlgensinger, B., and Schatz, O. (1991) Subunit-selective mutagenesis indicates minimal polymerase activity in heterodimer-associated p51 HIV-1 reverse transcriptase. EMBO J. 10, 3905-3911 (Pubitemid 21905419)
-
(1991)
EMBO Journal
, vol.10
, Issue.12
, pp. 3905-3911
-
-
Le, G.S.F.J.1
Naas, T.2
Wohlgensinger, B.3
Schatz, O.4
-
23
-
-
0025191211
-
Rapid purification of homodimer and heterodimer HIV-1 reverse transcriptase by metal chelate affinity chromatography
-
DOI 10.1111/j.1432-1033.1990.tb15306.x
-
Le Grice, S. F., and Grüninger-Leitch, F. (1990) Rapid purification of homodimer and heterodimer HIV-1 reverse transcriptase by metal chelate affinity chromatography. Eur. J. Biochem. 187, 307-314 (Pubitemid 20040388)
-
(1990)
European Journal of Biochemistry
, vol.187
, Issue.2
, pp. 307-314
-
-
Le, G.S.F.J.1
Gruninger-Leitch, F.2
-
24
-
-
79960189034
-
Synthesis, activity, and structural analysis of novel α-hydroxytropolone inhibitors of human immunodeficiency virus reverse transcriptase-associated ribonuclease H
-
Chung, S., Himmel, D. M., Jiang, J. K., Wojtak, K., Bauman, J. D., Rausch, J. W., Wilson, J. A., Beutler, J. A., Thomas, C. J., Arnold, E., and Le Grice, S. F. (2011) Synthesis, activity, and structural analysis of novel α-hydroxytropolone inhibitors of human immunodeficiency virus reverse transcriptase-associated ribonuclease H. J. Med. Chem. 54, 4462-4473
-
(2011)
J. Med. Chem.
, vol.54
, pp. 4462-4473
-
-
Chung, S.1
Himmel, D.M.2
Jiang, J.K.3
Wojtak, K.4
Bauman, J.D.5
Rausch, J.W.6
Wilson, J.A.7
Beutler, J.A.8
Thomas, C.J.9
Arnold, E.10
Le Grice, S.F.11
-
25
-
-
33646501535
-
Dimerization of human immunodeficiency virus type 1 reverse transcriptase as an antiviral target
-
Srivastava, S., Sluis-Cremer, N., and Tachedjian, G. (2006) Dimerization of human immunodeficiency virus type 1 reverse transcriptase as an antiviral target. Curr. Pharm. Des. 12, 1879-1894
-
(2006)
Curr. Pharm. Des.
, vol.12
, pp. 1879-1894
-
-
Srivastava, S.1
Sluis-Cremer, N.2
Tachedjian, G.3
-
26
-
-
0037436406
-
Mutagenesis of cysteine 280 of the reverse transcriptase of human immunodeficiency virus type-1: The effects on the ribonuclease H activity
-
DOI 10.1016/S0022-2836(03)00052-4
-
Sevilya, Z., Loya, S., Duvshani, A., Adir, N., and Hizi, A. (2003) Mutagenesis of cysteine 280 of the reverse transcriptase of human immunodeficiency virus type-1: the effects on the ribonuclease H activity. J. Mol. Biol. 327, 19-30 (Pubitemid 36293300)
-
(2003)
Journal of Molecular Biology
, vol.327
, Issue.1
, pp. 19-30
-
-
Sevilya, Z.1
Loya, S.2
Duvshani, A.3
Adir, N.4
Hizi, A.5
-
27
-
-
0026448638
-
Human immunodeficiency virus type 1 reverse transcriptase: Spatial and temporal relationship between the polymerase and RNase H activities
-
Gopalakrishnan, V., Peliska, J. A., and Benkovic, S. J. (1992) Human immunodeficiency virus type 1 reverse transcriptase: spatial and temporal relationship between the polymerase and RNase H activities. Proc. Natl. Acad. Sci. U.S.A. 89, 10763-10767
-
(1992)
Proc. Natl. Acad. Sci. U.S.A.
, vol.89
, pp. 10763-10767
-
-
Gopalakrishnan, V.1
Peliska, J.A.2
Benkovic, S.J.3
-
28
-
-
0026486193
-
Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase
-
Peliska, J. A., and Benkovic, S. J. (1992) Mechanism of DNA strand transfer reactions catalyzed by HIV-1 reverse transcriptase. Science 258, 1112-1118
-
(1992)
Science
, vol.258
, pp. 1112-1118
-
-
Peliska, J.A.1
Benkovic, S.J.2
-
29
-
-
0037117744
-
Altering the RNase H primer grip of human immunodeficiency virus reverse transcriptase modifies cleavage specificity
-
DOI 10.1021/bi015970t
-
Rausch, J. W., Lener, D., Miller, J. T., Julias, J. G., Hughes, S. H., and Le Grice, S. F. (2002) Altering the RNase H primer grip of human immunodeficiency virus reverse transcriptase modifies cleavage specificity. Biochemistry 41, 4856-4865 (Pubitemid 34298652)
-
(2002)
Biochemistry
, vol.41
, Issue.15
, pp. 4856-4865
-
-
Rausch, J.W.1
Lener, D.2
Miller, J.T.3
Julias, J.G.4
Hughes, S.H.5
Le, G.S.F.J.6
-
30
-
-
0029955774
-
Strained template under the thumbs How reverse transcriptase of human immunodeficiency virus type 1 moves along its template
-
Hermann, T., and Heumann, H. (1996) Strained template under the thumbs. How reverse transcriptase of human immunodeficiency virus type 1 moves along its template. Eur. J. Biochem. 242, 98-103 (Pubitemid 26386361)
-
(1996)
European Journal of Biochemistry
, vol.242
, Issue.1
, pp. 98-103
-
-
Hermann, T.1
Heumann, H.2
-
31
-
-
0028096227
-
Modulation of HIV-1 reverse transcriptase function in "selectively deleted" p66/p51 heterodimers
-
Jacques, P. S., Wöhrl, B. M., Howard, K. J., and Le Grice, S. F. (1994) Modulation of HIV-1 reverse transcriptase function in "selectively deleted" p66/p51 heterodimers. J. Biol. Chem. 269, 1388-1393
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 1388-1393
-
-
Jacques, P.S.1
Wöhrl, B.M.2
Howard, K.J.3
Le Grice, S.F.4
-
32
-
-
0032573488
-
Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: Implications for drug resistance
-
Huang, H., Chopra, R., Verdine, G. L., and Harrison, S. C. (1998) Structure of a covalently trapped catalytic complex of HIV-1 reverse transcriptase: implications for drug resistance. Science 282, 1669-1675 (Pubitemid 28549275)
-
(1998)
Science
, vol.282
, Issue.5394
, pp. 1669-1675
-
-
Huang, H.1
Chopra, R.2
Verdine, G.L.3
Harrison, S.C.4
-
33
-
-
0027318776
-
Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA
-
Jacobo-Molina, A., Ding, J., Nanni, R. G., Clark, A. D., Jr., Lu, X., Tantillo, C., Williams, R. L., Kamer, G., Ferris, A. L., and Clark, P. (1993) Crystal structure of human immunodeficiency virus type 1 reverse transcriptase complexed with double-stranded DNA at 3.0 A resolution shows bent DNA. Proc. Natl. Acad. Sci. U.S.A. 90, 6320-6324 (Pubitemid 23191507)
-
(1993)
Proceedings of the National Academy of Sciences of the United States of America
, vol.90
, Issue.13
, pp. 6320-6324
-
-
Jacobo-Molina, A.1
Ding, J.2
Nanni, R.G.3
Clark Jr., A.D.4
Lu, X.5
Tantillo, C.6
Williams, R.L.7
Kamer, G.8
Ferris, A.L.9
Clark, P.10
Hizi, A.11
Hughes, S.H.12
Arnold, E.13
-
34
-
-
0035868713
-
Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA:DNA
-
DOI 10.1093/emboj/20.6.1449
-
Sarafianos, S. G., Das, K., Tantillo, C., Clark, A. D., Jr., Ding, J., Whitcomb, J. M., Boyer, P. L., Hughes, S. H., and Arnold, E. (2001) Crystal structure of HIV-1 reverse transcriptase in complex with a polypurine tract RNA: DNA. EMBO J. 20, 1449-1461 (Pubitemid 32233984)
-
(2001)
EMBO Journal
, vol.20
, Issue.6
, pp. 1449-1461
-
-
Sarafianos, S.G.1
Das, K.2
Tantillo, C.3
Clark Jr., A.D.4
Ding, J.5
Whitcomb, J.M.6
Boyer, P.L.7
Hughes, S.H.8
Arnold, E.9
-
35
-
-
0028090098
-
The 'helix clamp' in HIV-1 reverse transcriptase: A new nucleic acid binding motif common in nucleic acid polymerases
-
Hermann, T., Meier, T., Götte, M., and Heumann, H. (1994) The "helix clamp" in HIV-1 reverse transcriptase: a new nucleic acid binding motif common in nucleic acid polymerases. Nucleic Acids Res. 22, 4625-4633 (Pubitemid 24354793)
-
(1994)
Nucleic Acids Research
, vol.22
, Issue.22
, pp. 4625-4633
-
-
Hermann, T.1
Meier, T.2
Gotte, M.3
Heumann, H.4
-
36
-
-
34247250802
-
Retro-transduction by virus pseudotyped with glycoprotein of vesicular stomatitis virus
-
DOI 10.1016/j.virol.2006.12.030, PII S0042682206009391
-
Ohishi, M., Shioda, T., and Sakuragi, J. (2007) Retro-transduction by virus pseudotyped with glycoprotein of vesicular stomatitis virus. Virology 362, 131-138 (Pubitemid 46617697)
-
(2007)
Virology
, vol.362
, Issue.1
, pp. 131-138
-
-
Ohishi, M.1
Shioda, T.2
Sakuragi, J.-i.3
-
37
-
-
44449115313
-
Development of non-nucleoside reverse transcriptase inhibitors for anti-HIV therapy
-
DOI 10.2174/187152108783954597
-
Sahlberg, C., and Zhou, X.-X. (2008) Development of non-nucleoside reverse transcriptase inhibitors for anti-HIV therapy. Antiinfect. Agents Med. Chem. 7, 101-117 (Pubitemid 351761450)
-
(2008)
Anti-Infective Agents in Medicinal Chemistry
, vol.7
, Issue.2
, pp. 101-117
-
-
Sahlberg, C.1
Zhou, X.-X.2
-
38
-
-
33845410116
-
Indolopyridones inhibit human immunodeficiency virus reverse transcriptase with a novel mechanism of action
-
DOI 10.1128/JVI.00889-06
-
Jochmans, D., Deval, J., Kesteleyn, B., Van Marck, H., Bettens, E., De Baere, I., Dehertogh, P., Ivens, T., Van Ginderen, M., Van Schoubroeck, B., Ehteshami, M., Wigerinck, P., Götte, M., and Hertogs, K. (2006) Indolopyridones inhibit human immunodeficiency virus reverse transcriptase with a novel mechanism of action. J. Virol. 80, 12283-12292 (Pubitemid 44904378)
-
(2006)
Journal of Virology
, vol.80
, Issue.24
, pp. 12283-12292
-
-
Jochmans, D.1
Deval, J.2
Kesteleyn, B.3
Van Marck, H.4
Bettens, E.5
De Baere, I.6
Dehertogh, P.7
Ivens, T.8
Van Ginderen, M.9
Van Schoubroeck, B.10
Ehteshami, M.11
Wigerinck, P.12
Gotte, M.13
Hertogs, K.14
-
39
-
-
0034673154
-
Human immunodeficiency virus type 1 reverse transcriptase dimer destabilization by 1-{spiro[4'-amino-2',2'-dioxo- 1',2'-oxathiole-5',3'- [2',5'-bis-O-(tert-butyldimethylsilyl)-β-D-ribofuranosyl]]}-3-ethylthymine
-
DOI 10.1021/bi991682+
-
Sluis-Cremer, N., Dmitrienko, G. I., Balzarini, J., Camarasa, M. J., and Parniak, M. A. (2000) Human immunodeficiency virus type 1 reverse transcriptase dimer destabilization by 1-[spiro[4″-amino-2″,2″ -dioxo- 1″,2″ -oxathiole-5″,3′-[2′,5′ -bis-O-(tert-butyldimethylsilyl)-β-D-ribofuranosyl]]]- 3-ethylthy mine. Biochemistry 39, 1427-1433 (Pubitemid 30090712)
-
(2000)
Biochemistry
, vol.39
, Issue.6
, pp. 1427-1433
-
-
Sluis-Cremer, N.1
Dmitrienko, G.I.2
Balzarini, J.3
Camarasa, M.-J.4
Parniak, M.A.5
-
40
-
-
33746948397
-
Structure-activity relationships of [2′,5′ -bis- O-(tert-butyldimethylsilyl)-β-D-ribofuranosyl]-3′ -spiro-5″-(4″ -amino- 1″,2″ -oxathiole-2″, 2″ -dioxide)thymine derivatives as inhibitors of HIV-1 reverse transcriptase dimerization
-
DOI 10.1021/jm0604575
-
Sluis-Cremer, N., Hamamouch, N., San Félix, A., Velazquez, S., Balzarini, J., and Camarasa, M. J. (2006) Structure-activity relationships of [2′,5′ -bis- O-(tert-butyldimethylsilyl)-β-D-ribofuranosyl]- 3′ -spiro-5″-(4″ -amino- 1″,2″ -oxathiole-2″, 2″ -dioxide)thymine derivatives as inhibitors of HIV-1 reverse transcriptase dimerization. J. Med. Chem. 49, 4834-4841 (Pubitemid 44202171)
-
(2006)
Journal of Medicinal Chemistry
, vol.49
, Issue.16
, pp. 4834-4841
-
-
Sluis-Cremer, N.1
Hamamouch, N.2
San, F.A.3
Velazquez, S.4
Balzarini, J.5
Camarasa, M.-J.6
-
41
-
-
64649098298
-
HIV-1 reverse transcriptase can simultaneously engage its DNA/RNA substrate at both DNA polymerase and RNase H active sites: Implications for RNase H inhibition
-
Beilhartz, G. L., Wendeler, M., Baichoo, N., Rausch, J., Le Grice, S., and Götte, M. (2009) HIV-1 reverse transcriptase can simultaneously engage its DNA/RNA substrate at both DNA polymerase and RNase H active sites: implications for RNase H inhibition. J. Mol. Biol. 388, 462-474
-
(2009)
J. Mol. Biol.
, vol.388
, pp. 462-474
-
-
Beilhartz, G.L.1
Wendeler, M.2
Baichoo, N.3
Rausch, J.4
Le Grice, S.5
Götte, M.6
-
42
-
-
0028360742
-
Structural basis of asymmetry in the human immunodeficiency virus type 1 reverse transcriptase heterodimer
-
DOI 10.1073/pnas.91.15.7242
-
Wang, J., Smerdon, S. J., Jäger, J., Kohlstaedt, L. A., Rice, P. A., Friedman, J. M., and Steitz, T. A. (1994) Structural basis of asymmetry in the human immunodeficiency virus type 1 reverse transcriptase heterodimer. Proc. Natl. Acad. Sci. U.S.A. 91, 7242-7246 (Pubitemid 24226839)
-
(1994)
Proceedings of the National Academy of Sciences of the United States of America
, vol.91
, Issue.15
, pp. 7242-7246
-
-
Wang, J.1
Smerdon, S.J.2
Jager, J.3
Kohlstaedt, L.A.4
Rice, P.A.5
Friedman, J.M.6
Steitz, T.A.7
-
43
-
-
0030924328
-
Mutating a conserved motif of the HIV-1 reverse transcriptase palm subdomain alters primer utilization
-
DOI 10.1021/bi963045e
-
Ghosh, M., Williams, J., Powell, M. D., Levin, J. G., and Le Grice, S. F. (1997) Mutating a conserved motif of the HIV-1 reverse transcriptase palm subdomain alters primer utilization. Biochemistry 36, 5758-5768 (Pubitemid 27214927)
-
(1997)
Biochemistry
, vol.36
, Issue.19
, pp. 5758-5768
-
-
Ghosh, M.1
Williams, J.2
Powell, M.D.3
Levin, J.G.4
Le, G.S.F.J.5
-
44
-
-
0034717161
-
Probing contacts between the ribonuclease H domain of HIV-1 reverse transcriptase and nucleic acid by site-specific photocross-linking
-
DOI 10.1074/jbc.M909808199
-
Rausch, J. W., Sathyanarayana, B. K., Bona, M. K., and Le Grice, S. F. (2000) Probing contacts between the ribonuclease H domain of HIV-1 reverse transcriptase and nucleic acid by site-specific photocross-linking. J. Biol. Chem. 275, 16015-16022 (Pubitemid 30366907)
-
(2000)
Journal of Biological Chemistry
, vol.275
, Issue.21
, pp. 16015-16022
-
-
Rausch, J.W.1
Sathyanarayana, B.K.2
Bona, M.K.3
Le, G.S.F.J.4
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