-
1
-
-
0023696960
-
Recent studies of the fidelity of DNA synthesis
-
Kunkel, T. A. and Bebenek, K. (1988) Recent studies of the fidelity of DNA synthesis Biochim. Biophys. Acta 951, 1-15
-
(1988)
Biochim. Biophys. Acta
, vol.951
, pp. 1-15
-
-
Kunkel, T.A.1
Bebenek, K.2
-
2
-
-
0025886466
-
A constant rate of spontaneous mutation in DNA-based microbes
-
Drake, J. W. (1991) A constant rate of spontaneous mutation in DNA-based microbes Proc. Natl. Acad. Sci. U.S.A. 88, 7160-7164
-
(1991)
Proc. Natl. Acad. Sci. U.S.A.
, vol.88
, pp. 7160-7164
-
-
Drake, J.W.1
-
3
-
-
0025783442
-
Fidelity mechanisms in DNA replication
-
Echols, H. and Goodman, M. F. (1991) Fidelity mechanisms in DNA replication Annu. Rev. Biochem. 60, 477-511
-
(1991)
Annu. Rev. Biochem.
, vol.60
, pp. 477-511
-
-
Echols, H.1
Goodman, M.F.2
-
4
-
-
8544278025
-
DNA polymerase fidelity: Kinetics, structure, and checkpoints
-
Joyce, C. M. and Benkovic, S. J. (2004) DNA polymerase fidelity: Kinetics, structure, and checkpoints Biochemistry 43, 14317-14324
-
(2004)
Biochemistry
, vol.43
, pp. 14317-14324
-
-
Joyce, C.M.1
Benkovic, S.J.2
-
5
-
-
2342419732
-
DNA replication fidelity
-
Kunkel, T. A. (2004) DNA replication fidelity J. Biol. Chem. 279, 16895-16898
-
(2004)
J. Biol. Chem.
, vol.279
, pp. 16895-16898
-
-
Kunkel, T.A.1
-
9
-
-
0028575379
-
Aromatic Nonpolar Nucleosides as Hydrophobic Isosteres of Pyrimidine and Purine Nucleosides
-
Schweitzer, B. A. and Kool, E. T. (1994) Aromatic Nonpolar Nucleosides as Hydrophobic Isosteres of Pyrimidine and Purine Nucleosides J. Org. Chem. 59, 7238-7242
-
(1994)
J. Org. Chem.
, vol.59
, pp. 7238-7242
-
-
Schweitzer, B.A.1
Kool, E.T.2
-
10
-
-
0032518398
-
Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution
-
Doublie, S., Tabor, S., Long, A. M., Richardson, C. C., and Ellenberger, T. (1998) Crystal structure of a bacteriophage T7 DNA replication complex at 2.2 Å resolution Nature 391, 251-258
-
(1998)
Nature
, vol.391
, pp. 251-258
-
-
Doublie, S.1
Tabor, S.2
Long, A.M.3
Richardson, C.C.4
Ellenberger, T.5
-
11
-
-
0035369086
-
Structure of the replicating complex of a pol α family DNA polymerase
-
Franklin, M. C., Wang, J., and Steitz, T. A. (2001) Structure of the replicating complex of a pol α family DNA polymerase Cell 105, 657-667
-
(2001)
Cell
, vol.105
, pp. 657-667
-
-
Franklin, M.C.1
Wang, J.2
Steitz, T.A.3
-
12
-
-
1642588255
-
Structures of mismatch replication errors observed in a DNA polymerase
-
Johnson, S. J. and Beese, L. S. (2004) Structures of mismatch replication errors observed in a DNA polymerase Cell 116, 803-816
-
(2004)
Cell
, vol.116
, pp. 803-816
-
-
Johnson, S.J.1
Beese, L.S.2
-
13
-
-
33748299363
-
The difluorotoluene debate: A decade later
-
Kool, E. T. and Sintim, H. O. (2006) The difluorotoluene debate: A decade later Chem. Commun., 3665-3675
-
(2006)
Chem. Commun.
, pp. 3665-3675
-
-
Kool, E.T.1
Sintim, H.O.2
-
14
-
-
0000127073
-
Sequence-specific recognition of double helical nucleic acids by proteins
-
Seeman, N. C., Rosenberg, J. M., and Rich, A. (1976) Sequence-specific recognition of double helical nucleic acids by proteins Proc. Natl. Acad. Sci. U.S.A. 73, 804-808
-
(1976)
Proc. Natl. Acad. Sci. U.S.A.
, vol.73
, pp. 804-808
-
-
Seeman, N.C.1
Rosenberg, J.M.2
Rich, A.3
-
15
-
-
0030592095
-
Structure of Taq polymerase with DNA at the polymerase active site
-
Eom, S. H., Wang, J., and Steitz, T. A. (1996) Structure of Taq polymerase with DNA at the polymerase active site Nature 382, 278-281
-
(1996)
Nature
, vol.382
, pp. 278-281
-
-
Eom, S.H.1
Wang, J.2
Steitz, T.A.3
-
16
-
-
0032518524
-
Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal
-
Kiefer, J. R., Mao, C., Braman, J. C., and Beese, L. S. (1998) Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal Nature 391, 304-307
-
(1998)
Nature
, vol.391
, pp. 304-307
-
-
Kiefer, J.R.1
Mao, C.2
Braman, J.C.3
Beese, L.S.4
-
17
-
-
0032535528
-
Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: Structural basis for nucleotide incorporation
-
Li, Y., Korolev, S., and Waksman, G. (1998) Crystal structures of open and closed forms of binary and ternary complexes of the large fragment of Thermus aquaticus DNA polymerase I: Structural basis for nucleotide incorporation EMBO J. 17, 7514-7525
-
(1998)
EMBO J.
, vol.17
, pp. 7514-7525
-
-
Li, Y.1
Korolev, S.2
Waksman, G.3
-
18
-
-
0035814929
-
Identification of hydrogen bonds between Escherichia coli DNA polymerase i (Klenow fragment) and the minor groove of DNA by amino acid substitution of the polymerase and atomic substitution of the DNA
-
Spratt, T. E. (2001) Identification of hydrogen bonds between Escherichia coli DNA polymerase I (Klenow fragment) and the minor groove of DNA by amino acid substitution of the polymerase and atomic substitution of the DNA Biochemistry 40, 2647-2652
-
(2001)
Biochemistry
, vol.40
, pp. 2647-2652
-
-
Spratt, T.E.1
-
19
-
-
0012768537
-
Presence of 18-Å long hydrogen bond track in the active site of Escherichia coli DNA polymerase i (Klenow fragment). Its requirement in the stabilization of enzyme-template-primer complex
-
Singh, K. and Modak, M. J. (2003) Presence of 18-Å long hydrogen bond track in the active site of Escherichia coli DNA polymerase I (Klenow fragment). Its requirement in the stabilization of enzyme-template-primer complex J. Biol. Chem. 278, 11289-11302
-
(2003)
J. Biol. Chem.
, vol.278
, pp. 11289-11302
-
-
Singh, K.1
Modak, M.J.2
-
20
-
-
0037154094
-
Determinants of DNA mismatch recognition within the polymerase domain of the Klenow fragment
-
Thompson, E. H., Bailey, M. F., van der Schans, E. J., Joyce, C. M., and Millar, D. P. (2002) Determinants of DNA mismatch recognition within the polymerase domain of the Klenow fragment Biochemistry 41, 713-722
-
(2002)
Biochemistry
, vol.41
, pp. 713-722
-
-
Thompson, E.H.1
Bailey, M.F.2
Van Der Schans, E.J.3
Joyce, C.M.4
Millar, D.P.5
-
21
-
-
0031587827
-
Crystal structure of a pol α family replication DNA polymerase from bacteriophage RB69
-
Wang, J., Sattar, A. K., Wang, C. C., Karam, J. D., Konigsberg, W. H., and Steitz, T. A. (1997) Crystal structure of a pol α family replication DNA polymerase from bacteriophage RB69 Cell 89, 1087-1099
-
(1997)
Cell
, vol.89
, pp. 1087-1099
-
-
Wang, J.1
Sattar, A.K.2
Wang, C.C.3
Karam, J.D.4
Konigsberg, W.H.5
Steitz, T.A.6
-
22
-
-
0025121103
-
Identification of residues critical for the polymerase activity of the Klenow fragment of DNA polymerase i from Escherichia coli
-
Polesky, A. H., Steitz, T. A., Grindley, N. D., and Joyce, C. M. (1990) Identification of residues critical for the polymerase activity of the Klenow fragment of DNA polymerase I from Escherichia coli J. Biol. Chem. 265, 14579-14591
-
(1990)
J. Biol. Chem.
, vol.265
, pp. 14579-14591
-
-
Polesky, A.H.1
Steitz, T.A.2
Grindley, N.D.3
Joyce, C.M.4
-
23
-
-
0026713678
-
Side chains involved in catalysis of the polymerase reaction of DNA polymerase i from Escherichia coli
-
Polesky, A. H., Dahlberg, M. E., Benkovic, S. J., Grindley, N. D., and Joyce, C. M. (1992) Side chains involved in catalysis of the polymerase reaction of DNA polymerase I from Escherichia coli J. Biol. Chem. 267, 8417-8428
-
(1992)
J. Biol. Chem.
, vol.267
, pp. 8417-8428
-
-
Polesky, A.H.1
Dahlberg, M.E.2
Benkovic, S.J.3
Grindley, N.D.4
Joyce, C.M.5
-
24
-
-
0028206048
-
Function and structure relationships in DNA polymerases
-
Joyce, C. M. and Steitz, T. A. (1994) Function and structure relationships in DNA polymerases Annu. Rev. Biochem. 63, 777-822
-
(1994)
Annu. Rev. Biochem.
, vol.63
, pp. 777-822
-
-
Joyce, C.M.1
Steitz, T.A.2
-
25
-
-
0033594982
-
Steady-state kinetic characterization of RB69 DNA polymerase mutants that affect dNTP incorporation
-
Yang, G., Lin, T., Karam, J., and Konigsberg, W. H. (1999) Steady-state kinetic characterization of RB69 DNA polymerase mutants that affect dNTP incorporation Biochemistry 38, 8094-8101
-
(1999)
Biochemistry
, vol.38
, pp. 8094-8101
-
-
Yang, G.1
Lin, T.2
Karam, J.3
Konigsberg, W.H.4
-
26
-
-
0033577360
-
Minor Groove Interactions between Polymerase and DNA: More Essential to Replication than Watson-Crick Hydrogen Bonds?
-
Morales, J. C. and Kool, E. T. (1999) Minor Groove Interactions between Polymerase and DNA: More Essential to Replication than Watson-Crick Hydrogen Bonds? J. Am. Chem. Soc. 121, 2323-2324
-
(1999)
J. Am. Chem. Soc.
, vol.121
, pp. 2323-2324
-
-
Morales, J.C.1
Kool, E.T.2
-
27
-
-
84861584310
-
Contribution of partial charge interactions and base-stacking to the efficiency of primer-extension at and beyond abasic sites in DNA
-
Xia, S., Vashishtha, A., Eom, S. H., Wang, J., and Konigsberg, W. (2012) Contribution of partial charge interactions and base-stacking to the efficiency of primer-extension at and beyond abasic sites in DNA Biochemistry (in press)
-
(2012)
Biochemistry
-
-
Xia, S.1
Vashishtha, A.2
Eom, S.H.3
Wang, J.4
Konigsberg, W.5
-
28
-
-
79959915790
-
Hydrogen-bonding capability of a templating difluorotoluene nucleotide residue in an RB69 DNA polymerase ternary complex
-
Xia, S., Konigsberg, W. H., and Wang, J. (2011) Hydrogen-bonding capability of a templating difluorotoluene nucleotide residue in an RB69 DNA polymerase ternary complex J. Am. Chem. Soc. 133, 10003-10005
-
(2011)
J. Am. Chem. Soc.
, vol.133
, pp. 10003-10005
-
-
Xia, S.1
Konigsberg, W.H.2
Wang, J.3
-
29
-
-
84863115780
-
Structural Basis for Differential Insertion Kinetics of dNMPs Opposite a Difluorotoluene Nucleotide Residue
-
Xia, S., Eom, S. H., Konigsberg, W. H., and Wang, J. (2012) Structural Basis for Differential Insertion Kinetics of dNMPs Opposite a Difluorotoluene Nucleotide Residue Biochemistry 51, 1476-1485
-
(2012)
Biochemistry
, vol.51
, pp. 1476-1485
-
-
Xia, S.1
Eom, S.H.2
Konigsberg, W.H.3
Wang, J.4
-
30
-
-
0027217643
-
Compilation, alignment, and phylogenetic relationships of DNA polymerases
-
Braithwaite, D. K. and Ito, J. (1993) Compilation, alignment, and phylogenetic relationships of DNA polymerases Nucleic Acids Res. 21, 787-802
-
(1993)
Nucleic Acids Res.
, vol.21
, pp. 787-802
-
-
Braithwaite, D.K.1
Ito, J.2
-
31
-
-
0037176870
-
Correlation of the kinetics of finger domain mutants in RB69 DNA polymerase with its structure
-
Yang, G., Franklin, M., Li, J., Lin, T. C., and Konigsberg, W. (2002) Correlation of the kinetics of finger domain mutants in RB69 DNA polymerase with its structure Biochemistry 41, 2526-2534
-
(2002)
Biochemistry
, vol.41
, pp. 2526-2534
-
-
Yang, G.1
Franklin, M.2
Li, J.3
Lin, T.C.4
Konigsberg, W.5
-
32
-
-
0037072265
-
A conserved Tyr residue is required for sugar selectivity in a Pol α DNA polymerase
-
Yang, G., Franklin, M., Li, J., Lin, T. C., and Konigsberg, W. (2002) A conserved Tyr residue is required for sugar selectivity in a Pol α DNA polymerase Biochemistry 41, 10256-10261
-
(2002)
Biochemistry
, vol.41
, pp. 10256-10261
-
-
Yang, G.1
Franklin, M.2
Li, J.3
Lin, T.C.4
Konigsberg, W.5
-
33
-
-
2542597119
-
The activity of selected RB69 DNA polymerase mutants can be restored by manganese ions: The existence of alternative metal ion ligands used during the polymerization cycle
-
Zakharova, E., Wang, J., and Konigsberg, W. (2004) The activity of selected RB69 DNA polymerase mutants can be restored by manganese ions: The existence of alternative metal ion ligands used during the polymerization cycle Biochemistry 43, 6587-6595
-
(2004)
Biochemistry
, vol.43
, pp. 6587-6595
-
-
Zakharova, E.1
Wang, J.2
Konigsberg, W.3
-
34
-
-
67651218926
-
RB69 DNA polymerase mutants with expanded nascent base-pair-binding pockets are highly efficient but have reduced base selectivity
-
Zhang, H., Beckman, J., Wang, J., and Konigsberg, W. (2009) RB69 DNA polymerase mutants with expanded nascent base-pair-binding pockets are highly efficient but have reduced base selectivity Biochemistry 48, 6940-6950
-
(2009)
Biochemistry
, vol.48
, pp. 6940-6950
-
-
Zhang, H.1
Beckman, J.2
Wang, J.3
Konigsberg, W.4
-
35
-
-
79952077426
-
Insights into base selectivity from the 1.8 Å resolution structure of an RB69 DNA polymerase ternary complex
-
Wang, M., Xia, S., Blaha, G., Steitz, T. A., Konigsberg, W. H., and Wang, J. (2011) Insights into base selectivity from the 1.8 Å resolution structure of an RB69 DNA polymerase ternary complex Biochemistry 50, 581-590
-
(2011)
Biochemistry
, vol.50
, pp. 581-590
-
-
Wang, M.1
Xia, S.2
Blaha, G.3
Steitz, T.A.4
Konigsberg, W.H.5
Wang, J.6
-
36
-
-
80054973131
-
Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase
-
Xia, S., Wang, M., Blaha, G., Konigsberg, W. H., and Wang, J. (2011) Structural Insights into Complete Metal Ion Coordination from Ternary Complexes of B Family RB69 DNA Polymerase Biochemistry 50, 9114-9124
-
(2011)
Biochemistry
, vol.50
, pp. 9114-9124
-
-
Xia, S.1
Wang, M.2
Blaha, G.3
Konigsberg, W.H.4
Wang, J.5
-
37
-
-
79951677675
-
Variation in mutation rates caused by RB69pol fidelity mutants can be rationalized on the basis of their kinetic behavior and crystal structures
-
Xia, S., Wang, M., Lee, H. R., Sinha, A., Blaha, G., Christian, T., Wang, J., and Konigsberg, W. (2011) Variation in mutation rates caused by RB69pol fidelity mutants can be rationalized on the basis of their kinetic behavior and crystal structures J. Mol. Biol. 406, 558-570
-
(2011)
J. Mol. Biol.
, vol.406
, pp. 558-570
-
-
Xia, S.1
Wang, M.2
Lee, H.R.3
Sinha, A.4
Blaha, G.5
Christian, T.6
Wang, J.7
Konigsberg, W.8
-
38
-
-
84863116537
-
Bidentate and tridentate metal-ion coordination states within ternary complexes of RB69 DNA polymerase
-
Xia, S., Eom, S. H., Konigsberg, W. H., and Wang, J. (2012) Bidentate and tridentate metal-ion coordination states within ternary complexes of RB69 DNA polymerase Protein Sci. 21, 447-451
-
(2012)
Protein Sci.
, vol.21
, pp. 447-451
-
-
Xia, S.1
Eom, S.H.2
Konigsberg, W.H.3
Wang, J.4
-
39
-
-
81255142769
-
Structure of the 2-aminopurine-cytosine base pair formed in the polymerase active site of the RB69 Y567A-DNA polymerase
-
Reha-Krantz, L. J., Hariharan, C., Subuddhi, U., Xia, S., Zhao, C., Beckman, J., Christian, T., and Konigsberg, W. (2011) Structure of the 2-aminopurine-cytosine base pair formed in the polymerase active site of the RB69 Y567A-DNA polymerase Biochemistry 50, 10136-10149
-
(2011)
Biochemistry
, vol.50
, pp. 10136-10149
-
-
Reha-Krantz, L.J.1
Hariharan, C.2
Subuddhi, U.3
Xia, S.4
Zhao, C.5
Beckman, J.6
Christian, T.7
Konigsberg, W.8
-
40
-
-
0031059866
-
Processing of X-ray diffraction data collected in oscillation mode
-
Otwinowski, Z. and Minor, W. (1997) Processing of X-ray diffraction data collected in oscillation mode Methods Enzymol. 276, 307-326
-
(1997)
Methods Enzymol.
, vol.276
, pp. 307-326
-
-
Otwinowski, Z.1
Minor, W.2
-
41
-
-
34447508216
-
Phaser crystallographic software
-
McCoy, A. J., Grosse-Kunstleve, R. W., Adams, P. D., Winn, M. D., Storoni, L. C., and Read, R. J. (2007) Phaser crystallographic software J. Appl. Crystallogr. 40, 658-674
-
(2007)
J. Appl. Crystallogr.
, vol.40
, pp. 658-674
-
-
McCoy, A.J.1
Grosse-Kunstleve, R.W.2
Adams, P.D.3
Winn, M.D.4
Storoni, L.C.5
Read, R.J.6
-
42
-
-
0030924992
-
Refinement of macromolecular structures by the maximum-likelihood method
-
Murshudov, G. N., Vagin, A. A., and Dodson, E. J. (1997) Refinement of macromolecular structures by the maximum-likelihood method Acta Crystallogr. D53, 240-255
-
(1997)
Acta Crystallogr.
, vol.53
, pp. 240-255
-
-
Murshudov, G.N.1
Vagin, A.A.2
Dodson, E.J.3
-
43
-
-
13244281317
-
Coot: Model-building tools for molecular graphics
-
Emsley, P. and Cowtan, K. (2004) Coot: Model-building tools for molecular graphics Acta Crystallogr. D60, 2126-2132
-
(2004)
Acta Crystallogr.
, vol.60
, pp. 2126-2132
-
-
Emsley, P.1
Cowtan, K.2
-
44
-
-
79955574923
-
-
version 1.2r3pre () Schrodinger, LLC, New York.
-
The PyMOL Molecular Graphics System, version 1.2r3pre (2011) Schrodinger, LLC, New York.
-
(2011)
The PyMOL Molecular Graphics System
-
-
-
46
-
-
75649126548
-
Characterization of nucleobase analogue FRET acceptor tCnitro
-
Preus, S., Borjesson, K., Kilsa, K., Albinsson, B., and Wilhelmsson, L. M. (2010) Characterization of nucleobase analogue FRET acceptor tCnitro J. Phys. Chem. B 114, 1050-1056
-
(2010)
J. Phys. Chem. B
, vol.114
, pp. 1050-1056
-
-
Preus, S.1
Borjesson, K.2
Kilsa, K.3
Albinsson, B.4
Wilhelmsson, L.M.5
-
47
-
-
84861624641
-
Using fluorescent cytosine analogue tCo to probe the effect of Y567 to Ala substitution on the pre-insertion steps of dNMP incorporation by RB69 DNA polymerase
-
Xia, S., Beckman, J., Wang, J., and Konigsberg, W. (2012) Using fluorescent cytosine analogue tCo to probe the effect of Y567 to Ala substitution on the pre-insertion steps of dNMP incorporation by RB69 DNA polymerase Biochemistry (in press)
-
(2012)
Biochemistry
-
-
Xia, S.1
Beckman, J.2
Wang, J.3
Konigsberg, W.4
-
48
-
-
69949128706
-
Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase δ
-
Swan, M. K., Johnson, R. E., Prakash, L., Prakash, S., and Aggarwal, A. K. (2009) Structural basis of high-fidelity DNA synthesis by yeast DNA polymerase δ Nat. Struct. Mol. Biol. 16, 979-986
-
(2009)
Nat. Struct. Mol. Biol.
, vol.16
, pp. 979-986
-
-
Swan, M.K.1
Johnson, R.E.2
Prakash, L.3
Prakash, S.4
Aggarwal, A.K.5
-
49
-
-
72549092945
-
Structural insight into translesion synthesis by DNA Pol II
-
Wang, F. and Yang, W. (2009) Structural insight into translesion synthesis by DNA Pol II Cell 139, 1279-1289
-
(2009)
Cell
, vol.139
, pp. 1279-1289
-
-
Wang, F.1
Yang, W.2
-
50
-
-
34547175132
-
Structures of φ29 DNA polymerase complexed with substrate: The mechanism of translocation in B-family polymerases
-
Berman, A. J., Kamtekar, S., Goodman, J. L., Lazaro, J. M., de Vega, M., Blanco, L., Salas, M., and Steitz, T. A. (2007) Structures of φ29 DNA polymerase complexed with substrate: The mechanism of translocation in B-family polymerases EMBO J. 26, 3494-3505
-
(2007)
EMBO J.
, vol.26
, pp. 3494-3505
-
-
Berman, A.J.1
Kamtekar, S.2
Goodman, J.L.3
Lazaro, J.M.4
De Vega, M.5
Blanco, L.6
Salas, M.7
Steitz, T.A.8
-
51
-
-
0025280401
-
Structural studies of protein-nucleic acid interaction: The sources of sequence-specific binding
-
Steitz, T. A. (1990) Structural studies of protein-nucleic acid interaction: The sources of sequence-specific binding Q. Rev. Biophys. 23, 205-280
-
(1990)
Q. Rev. Biophys.
, vol.23
, pp. 205-280
-
-
Steitz, T.A.1
-
52
-
-
0025082082
-
Molecular recognition in the minor groove of the DNA helix. Studies on the synthesis of oligonucleotides and polynucleotides containing 3-deaza-2′-deoxyadenosine. Interaction of the oligonucleotides with the restriction endonuclease EcoRV
-
Cosstick, R., Li, X., Tuli, D. K., Williams, D. M., Connolly, B. A., and Newman, P. C. (1990) Molecular recognition in the minor groove of the DNA helix. Studies on the synthesis of oligonucleotides and polynucleotides containing 3-deaza-2′-deoxyadenosine. Interaction of the oligonucleotides with the restriction endonuclease EcoRV Nucleic Acids Res. 18, 4771-4778
-
(1990)
Nucleic Acids Res.
, vol.18
, pp. 4771-4778
-
-
Cosstick, R.1
Li, X.2
Tuli, D.K.3
Williams, D.M.4
Connolly, B.A.5
Newman, P.C.6
-
53
-
-
0030836218
-
Klenow fragment-DNA interaction required for the incorporation of nucleotides opposite guanine and O6-methylguanine
-
Spratt, T. E. (1997) Klenow fragment-DNA interaction required for the incorporation of nucleotides opposite guanine and O6-methylguanine Biochemistry 36, 13292-13297
-
(1997)
Biochemistry
, vol.36
, pp. 13292-13297
-
-
Spratt, T.E.1
-
54
-
-
0032522130
-
Inhibition of DNA polymerase reactions by pyrimidine nucleotide analogues lacking the 2-keto group
-
Guo, M. J., Hildbrand, S., Leumann, C. J., McLaughlin, L. W., and Waring, M. J. (1998) Inhibition of DNA polymerase reactions by pyrimidine nucleotide analogues lacking the 2-keto group Nucleic Acids Res. 26, 1863-1869
-
(1998)
Nucleic Acids Res.
, vol.26
, pp. 1863-1869
-
-
Guo, M.J.1
Hildbrand, S.2
Leumann, C.J.3
McLaughlin, L.W.4
Waring, M.J.5
-
55
-
-
0034673294
-
Varied Molecular Interactions at the Active Sites of Several DNA Polymerases: Nonpolar Nucleoside Isosteres as Probes
-
Morales, J. C. and Kool, E. T. (2000) Varied Molecular Interactions at the Active Sites of Several DNA Polymerases: Nonpolar Nucleoside Isosteres as Probes J. Am. Chem. Soc. 122, 1001-1007
-
(2000)
J. Am. Chem. Soc.
, vol.122
, pp. 1001-1007
-
-
Morales, J.C.1
Kool, E.T.2
-
56
-
-
2342572250
-
Probing minor groove recognition contacts by DNA polymerases and reverse transcriptases using 3-deaza-2′-deoxyadenosine
-
Hendrickson, C. L., Devine, K. G., and Benner, S. A. (2004) Probing minor groove recognition contacts by DNA polymerases and reverse transcriptases using 3-deaza-2′-deoxyadenosine Nucleic Acids Res. 32, 2241-2250
-
(2004)
Nucleic Acids Res.
, vol.32
, pp. 2241-2250
-
-
Hendrickson, C.L.1
Devine, K.G.2
Benner, S.A.3
-
57
-
-
0031792598
-
Efficient replication between non-hydrogen-bonded nucleoside shape analogs
-
Morales, J. C. and Kool, E. T. (1998) Efficient replication between non-hydrogen-bonded nucleoside shape analogs Nat. Struct. Biol. 5, 950-954
-
(1998)
Nat. Struct. Biol.
, vol.5
, pp. 950-954
-
-
Morales, J.C.1
Kool, E.T.2
-
58
-
-
17144371499
-
Fidelity of mispair formation and mispair extension is dependent on the interaction between the minor groove of the primer terminus and Arg668 of DNA polymerase i of Escherichia coli
-
McCain, M. D., Meyer, A. S., Schultz, S. S., Glekas, A., and Spratt, T. E. (2005) Fidelity of mispair formation and mispair extension is dependent on the interaction between the minor groove of the primer terminus and Arg668 of DNA polymerase I of Escherichia coli Biochemistry 44, 5647-5659
-
(2005)
Biochemistry
, vol.44
, pp. 5647-5659
-
-
McCain, M.D.1
Meyer, A.S.2
Schultz, S.S.3
Glekas, A.4
Spratt, T.E.5
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