Klenow fragment-DNA interaction required for the incorporation of nucleotides opposite guanine and O6-methylguanine

Biochemistry

Volumn 36, Issue 43, 1997, Pages 13292-13297

  Spratt, Thomas E ^a  

^a AMERICAN HEALTH FOUNDATION   (United States)

Author keywords

[No Author keywords available]

Indexed keywords

6 O METHYLGUANINE; DEOXYCYTIDINE TRIPHOSPHATE; DNA DIRECTED DNA POLYMERASE ALPHA; DNA DIRECTED DNA POLYMERASE BETA; GUANINE DERIVATIVE; NUCLEOTIDE; OLIGODEOXYNUCLEOTIDE; THYMIDINE TRIPHOSPHATE;

ARTICLE; BASE PAIRING; DNA REPLICATION; DNA TEMPLATE; ENZYME KINETICS; HYDROGEN BOND; MUTAGENICITY; PRIORITY JOURNAL; PROTEIN DNA INTERACTION; STEADY STATE;

ANTIMETABOLITES; DEOXYADENINE NUCLEOTIDES; DEOXYCYTOSINE NUCLEOTIDES; DEOXYGUANINE NUCLEOTIDES; DEOXYRIBONUCLEOTIDES; DNA POLYMERASE I; GUANINE; KINETICS; THYMINE NUCLEOTIDES;

EID: 0030836218     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi971253g     Document Type: Article

References (39)

1. Johnson, K. A. (1993) Annu. Rev. Biochem. 62, 685-713.
2. Petruska, J., Goodman, M. F., Boosalis, M. S., Sowers, L. C., Cheong, C., and Tinoco, I., Jr. (1988) Proc. Natl. Acad. Sci. U.S.A. 85, 6252-6256.
3. Echols, H., and Goodman, M. F. (1991) Annu. Rev. Biochem. 60, 477-511.
4. Hunter, W. N., Brown, T., Anand, N. N., and Kennard, O. (1986) Nature 320, 552-555.
5. Hunter, W. N., Brown, T., Knele, G., Anand, N. N., Rabinovich, D., and Kennard, O. (1987) J. Biol. Chem. 262, 9962-9970.
6. Pelletier, H., Sawaya, M. R., Kumar, A., Wilson, S. H., and Kraut, J. (1994) Science 264, 1891-1903.
7. Kim, Y., Eom, S. H., Wang, J., Lee, D.-S., Suh, S. W., and Steitz, T. A. (1996) Nature 382, 278-281.
8. Beard, W. A., Osheroff, W. P., Pradad, R., Sawaya, M. R., Jaju, M., Wood, T. G., Kraut, J., Kunkel, T. A., and Wilson, S. H. (1996) J. Biol. Chem. 271, 12141-12144.
9. Werneburg, B. G., Ahn, J., Zhong, X., Hondal, R. J., Kraynov, V. S., and Tsai, M.-D. (1996) Biochemistry 35, 7041-7050.
10. Lutz, M. J., Held, H. A., Hottinger, M., Hübscher, U., and Benner, S. A. (1996) Nucleic Acids Res. 24, 1308-1313.
11. Pegg, A. E. (1984) Cancer Invest. 2, 223-231.
12. Loveless, A. (1969) Nature 223, 206-207.
13. Swann, P. F. (1990) Mutat. Res. 233, 81-94.
14. Gaffney, B. L., and Jones, R. A. (1989) Biochemistry 28, 5881-5889.
15. Georgiadis, P., Smith, C. A., and Swann, P. F. (1991) Cancer Res. 51, 5843-5850.
16. Leonard, G. A., Thomson, J., Watson, W. P., and Brown, T. (1990) Proc. Natl. Acad. Sci., U. S. A. 87, 9573-9676.
17. Williams, L. D., and Shaw, B. R. (1987) Proc. Natl. Acad. Sci. U.S.A. 84, 1779-1783.
18. Spratt, T. E., and Levy, D. E. (1997) Nucleic Acids Res. 25, 3354-3361.
19. Dosanjh, M. K., Galeros, G., Goodman, M. F., and Singer, B. (1991) Biochemistry 30, 11595-11599.
20. Dunn, D. B., and Hall, R. H. (1986) in Handbook of Biochemistry and Molecular Biology, 3rd ed. (Fasman, G. D., Ed.) Vol. 1, pp 65-215, CRC Press, Boca Raton, FL.
21. Spratt, T. E., and de los Santos, H. (1992) Biochemistry 31, 3688-3694.
22. Spratt, T. E., and Campbell, C. R. (1994) Biochemistry 33, 11364-11371.
23. Ti, G. S., Gaffney, B. L., and Jones, R. A. (1982) J. Am. Chem. Soc. 104, 1316-1319.
24. Jones, R. A. (1984) in Oligonucleotide synthesis. A practical approach (Gait, M. J., Ed.) pp 23-34, IRL Press, Oxford.
25. Borer, P. (1986) in Handbook of Biochemistry and Molecular Biology, 3rd ed. (Fasman, G. D., Ed.) Vol. 1, p 589, CRC Press, Boca Raton, FL.
26. Singer, B., Chavez, F., Goodman, M. F., Essigmann, J. M., and Dosanjh, M. K. (1989) Proc. Natl. Acad. Sci. U.S.A. 86, 8271-8274.
27. Kuchta, R. D., Mizrahi, V., Benkovic, P. A., Johnson, K. A., and Benkovic, S. J. (1987) Biochemistry 26, 8410-8417.
28. Kohlstaedt, L. A., Wang, J., Friedman, J. M., Rice, P. A., and Steitz, T. A. (1992) Science 256, 1783-1790.
29. Beese, L. S., Derbyshire, V., and Steitz, T. A. (1993) Science 260, 352-355.
30. Ollis, D. L., Brick, P., Hamlin, R., Xuong, N. G., and Steitz, T. A. (1985) Nature 313, 762-766.
31. Mizrahi, V., Henrie, R. N., Marlier, J. F., Johnson, K. A., and Benkovic, S. J. (1985) Biochemistry 24, 4010-4018.
32. Patel, S. S., Wong, I., and Johnson, K. A. (1991) Biochemistry 30, 511-525.
33. Ahn, J., Werneburg, B. G., and Tsai, M.-D. (1997) Biochemistry 36, 1100-1107.
34. Kuchta, R. D., Benkovic, P., and Benkovic, S. J. (1988) Biochemistry 27, 6717-6725.
35. Tan, H.-B., Swann, P. F., and Chance, E. M. (1994) Biochemistry 33, 5335-5346.
36. Jencks, W. P. (1975) Adv. Enzymol. 43, 219-410.
37. Webster, G. D., Sanderson, M. R., Skelley, J. V., Neidle, S., Swann, P. F., Li, B. F. L., and Tickle, I. J. (1990) Proc. Natl. Acad. Sci. U.S.A. 87, 6693-6697.
38. Gao, X., and Patel, D. J. (1988) J. Am. Chem. Soc. 110, 5178-5182.
39. Patel, D. J., Kozlowski, S. A., and Itakura, K. (1984) Biochemistry 23, 3207-3217.