-
2
-
-
80054082654
-
Phospholipase A2 enzymes: Physical structure, biological function, disease implication, chemical inhibition, and therapeutic intervention
-
Dennis, E. A.; Cao, J.; Hsu, Y. H.; Magrioti, V.; Kokotos, G. Phospholipase A2 enzymes: Physical structure, biological function, disease implication, chemical inhibition, and therapeutic intervention. Chem. Rev. 2011, 111, 6130-85.
-
(2011)
Chem. Rev.
, vol.111
, pp. 6130-6185
-
-
Dennis, E.A.1
Cao, J.2
Hsu, Y.H.3
Magrioti, V.4
Kokotos, G.5
-
3
-
-
33748316787
-
Properties of the Group IV phospholipase A2 family
-
Ghosh, M.; Tucker, D. E.; Burchett, S. A.; Leslie, C. C. Properties of the Group IV phospholipase A2 family. Prog. Lipid Res. 2006, 45, 487-510.
-
(2006)
Prog. Lipid Res.
, vol.45
, pp. 487-510
-
-
Ghosh, M.1
Tucker, D.E.2
Burchett, S.A.3
Leslie, C.C.4
-
4
-
-
0031445523
-
2 in allergic response and parturition
-
DOI 10.1038/37622
-
Uozumi, N.; Kume, K.; Nagase, T.; Nakatani, N.; Ishii, S.; Tashiro, F.; Komagata, Y.; Maki, K.; Ikuta, K.; Ouchi, Y.; Miyazaki, J.; Shimizu, T. Role of cytosolic phospholipase A2 in allergic response and parturition. Nature 1997, 390, 618-622. (Pubitemid 28016197)
-
(1997)
Nature
, vol.390
, Issue.6660
, pp. 618-622
-
-
Uozumi, H.1
Kume, K.2
Nagase, T.3
Nakatani, H.4
Ishii, S.5
Tashiro, F.6
Komagata, Y.7
Maki, K.8
Ikuta, K.9
Ouchi, Y.10
Miyazaki, J.-I.11
Shimizu, T.12
-
5
-
-
0031471709
-
2
-
DOI 10.1038/37635
-
Bonventre, J. V.; Huang, Z.; Taheri, M. R.; O'Leary, E.; Li, E.; Moskowitz, M. A.; Sapirstein, A. Reduced fertility and postischaemic brain injury in mice deficient in cytosolic phospholipase A2. Nature 1997, 390, 622-625. (Pubitemid 28016198)
-
(1997)
Nature
, vol.390
, Issue.6660
, pp. 622-625
-
-
Bonventre, J.V.1
Huang, Z.2
Taheri, M.R.3
O'Leary, E.4
Li, E.5
Moskowitz, M.A.6
Sapirstein, A.7
-
6
-
-
73649118166
-
Phospholipase A2 inhibitors as potential therapeutic agents for the treatment of inflammatory diseases
-
Magrioti, V.; Kokotos, G. Phospholipase A2 inhibitors as potential therapeutic agents for the treatment of inflammatory diseases. Expert Opin. Ther. Pat. 2010, 20, 1-18.
-
(2010)
Expert Opin. Ther. Pat.
, vol.20
, pp. 1-18
-
-
Magrioti, V.1
Kokotos, G.2
-
7
-
-
0025810578
-
2+-dependent translocation domain with homology to PKC and GAP
-
Clark, J. D.; Lin, L. L.; Kriz, R.W.; Ramesha, C. S.; Sultzman, L. A.; Lin, A. Y.; Milona, N.; Knopf, J. L. A novel arachidonic acid-selective cytosolic PLA2 contains a Ca2+-dependent translocation domain with homology to PKC and GAP. Cell 1991, 65, 1043-51. (Pubitemid 121001692)
-
(1991)
Cell
, vol.65
, Issue.6
, pp. 1043-1051
-
-
Clark, J.D.1
Lin, L.-L.2
Kriz, R.W.3
Ramesha, C.S.4
Sultzman, L.A.5
Lin, A.Y.6
Milona, N.7
Knopf, J.L.8
-
8
-
-
0025922172
-
2 is a 100-kDa protein in human monoblast U937 cells
-
Kramer, R. M.; Roberts, E. F.; Manetta, J.; Putnam, J. E. The Ca2+-sensitive cytosolic phospholipase A2 is a 100-kDa protein in human monoblast U937 cells. J. Biol. Chem. 1991, 266, 5268-72. (Pubitemid 21909485)
-
(1991)
Journal of Biological Chemistry
, vol.266
, Issue.8
, pp. 5268-5272
-
-
Kramer, R.M.1
Roberts, E.F.2
Manetta, J.3
Putnam, J.E.4
-
9
-
-
9444223852
-
2. Probing the role of histidine, aspartic acid, cysteine, and arginine
-
DOI 10.1074/jbc.271.32.19225
-
Pickard, R. T.; Chiou, X. G.; Strifler, B. A.; DeFelippis, M. R.; Hyslop, P. A.; Tebbe, A. L.; Yee, Y. K.; Reynolds, L. J.; Dennis, E. A.; Kramer, R. M.; Sharp, J. D. Identification of essential residues for the catalytic function of 85-kDa cytosolic phospholipase A2. Probing the role of histidine, aspartic acid, cysteine, and arginine. J. Biol. Chem. 1996, 271, 19225-31. (Pubitemid 26271587)
-
(1996)
Journal of Biological Chemistry
, vol.271
, Issue.32
, pp. 19225-19231
-
-
Pickard, R.T.1
Grace Chiou, X.2
Strifler, B.A.3
DeFelippis, M.R.4
Hyslop, P.A.5
Tebbe, A.L.6
Yee, Y.K.7
Reynolds, L.J.8
Dennis, E.A.9
Kramer, R.M.10
Sharp, J.D.11
-
10
-
-
0033617291
-
2 reveals a novel topology and catalytic mechanism
-
DOI 10.1016/S0092-8674(00)80744-8
-
Dessen, A.; Tang, J.; Schmidt, H.; Stahl, M.; Clark, J. D.; Seehra, J.; Somers, W. S. Crystal structure of human cytosolic phospholipase A2 reveals a novel topology and catalytic mechanism. Cell 1999, 97, 349-360. (Pubitemid 29214591)
-
(1999)
Cell
, vol.97
, Issue.3
, pp. 349-360
-
-
Dessen, A.1
Tang, J.2
Schmidt, H.3
Stahl, M.4
Clark, J.D.5
Seehra, J.6
Somers, W.S.7
-
11
-
-
0028133121
-
2
-
Sharp, J. D.; Pickard, R. T.; Chiou, X. G.; Manetta, J. V.; Kovacevic, S.; Miller, J. R.; Varshavsky, A. D.; Roberts, E. F.; Strifler, B. A.; Brems, D. N.; et al. Serine 228 is essential for catalytic activities of 85-kDa cytosolic phospholipase A2. J. Biol. Chem. 1994, 269, 23250-23254. (Pubitemid 24283313)
-
(1994)
Journal of Biological Chemistry
, vol.269
, Issue.37
, pp. 23250-23254
-
-
Sharp, J.D.1
Pickard, R.T.2
Chiou, X.G.3
Manetta, J.V.4
Kovacevic, S.5
Miller, J.R.6
Varshavsky, A.D.7
Roberts, E.F.8
Strifler, B.A.9
Brems, D.N.10
Kramer, R.M.11
-
12
-
-
0029879110
-
Functional identification of the active-site nucleophile of the human 85-kDa cytosolic phospholipase A2
-
Huang, Z.; Payette, P.; Abdullah, K.; Cromlish, W. A.; Kennedy, B. P. Functional identification of the active-site nucleophile of the human 85-kDa cytosolic phospholipase A2. Biochemistry 1996, 35, 3712-3721.
-
(1996)
Biochemistry
, vol.35
, pp. 3712-3721
-
-
Huang, Z.1
Payette, P.2
Abdullah, K.3
Cromlish, W.A.4
Kennedy, B.P.5
-
13
-
-
57649148807
-
A phospholipid substrate molecule residing in the membrane surface mediates opening of the lid region in group IVA cytosolic phospholipase A2
-
Burke, J. E.; Hsu, Y. H.; Deems, R. A.; Li, S.; Woods, V. L. Jr.; Dennis, E. A. A phospholipid substrate molecule residing in the membrane surface mediates opening of the lid region in group IVA cytosolic phospholipase A2. J. Biol. Chem. 2008, 283, 31227-31236.
-
(2008)
J. Biol. Chem.
, vol.283
, pp. 31227-31236
-
-
Burke, J.E.1
Hsu, Y.H.2
Deems, R.A.3
Li, S.4
Woods Jr., V.L.5
Dennis, E.A.6
-
16
-
-
45749141743
-
2 α inhibitors: Discovery and in vitro and in vivo characterization of 4-{3-[5-chloro-2-(2-{[(3, 4- dichlorobenzyl)sulfonyl]amino}ethyl)-1-(diphenylmethyl)-1H-indol-3-yl]propyl} benzoic acid, efipladib
-
DOI 10.1021/jm701467e
-
McKew, J. C.; Lee, K. L.; Shen, M. W.; Thakker, P.; Foley, M. A.; Behnke, M. L.; Hu, B.; Sum, F. W.; Tam, S.; Hu, Y.; Chen, L.; Kirincich, S. J.; Michalak, R.; Thomason, J.; Ipek, M.; Wu, K.; Wooder, L.; Ramarao, M. K.; Murphy, E. A.; Goodwin, D. G.; Albert, L.; Xu, X.; Donahue, F.; Ku, M. S.; Keith, J.; Nickerson-Nutter, C. L.; Abraham, W. M.; Williams, C.; Hegen, M.; Clark, J. D. Indole cytosolic phospholipase A2a inhibitors: Discovery and in vitro and in vivo characterization of 4-{3-[5-chloro-2-(2-{[(3,4-dichlorobenzyl) sulfonyl]amino}ethyl)-1-(dipheny lmethyl)-1H-indol-3-yl]propyl}benzoic acid, efipladib. J. Med. Chem. 2008, 51, 3388-3413. (Pubitemid 351874997)
-
(2008)
Journal of Medicinal Chemistry
, vol.51
, Issue.12
, pp. 3388-3413
-
-
McKew, J.C.1
Lee, K.L.2
Shen, M.W.H.3
Thakker, P.4
Foley, M.A.5
Behnke, M.L.6
Hu, B.7
Sum, F.-W.8
Tam, S.9
Hu, Y.10
Chen, L.11
Kirincich, S.J.12
Michalak, R.13
Thomason, J.14
Ipek, M.15
Wu, K.16
Wooder, L.17
Ramarao, M.K.18
Murphy, E.A.19
Goodwin, D.G.20
Albert, L.21
Xu, X.22
Donahue, F.23
Ku, M.S.24
Keith, J.25
Nickerson-Nutter, C.L.26
Abraham, W.M.27
Williams, C.28
Hegen, M.29
Clark, J.D.30
more..
-
17
-
-
33947732957
-
2α
-
DOI 10.1021/jm061131z
-
Lee, K. L.; Foley, M. A.; Chen, L.; Behnke, M. L.; Lovering, F. E.; Kirincich, S. J.; Wang, W.; Shim, J.; Tam, S.; Shen, M. W.; Khor, S.; Xu, X.; Goodwin, D. G.; Ramarao, M. K.; Nickerson-Nutter, C.; Donahue, F.; Ku, M. S.; Clark, J. D.; McKew, J. C. Discovery of Ecopladib, an indole inhibitor of cytosolic phospholipase A2a. J. Med. Chem. 2007, 50, 1380-1400. (Pubitemid 46504977)
-
(2007)
Journal of Medicinal Chemistry
, vol.50
, Issue.6
, pp. 1380-1400
-
-
Lee, K.L.1
Foley, M.A.2
Chen, L.3
Behnke, M.L.4
Lovering, F.E.5
Kirincich, S.J.6
Wang, W.7
Shim, J.8
Tam, S.9
Shen, M.W.H.10
Khor, S.11
Xu, X.12
Goodwin, D.G.13
Ramarao, M.K.14
Nickerson-Nutter, C.15
Donahue, F.16
Ku, M.S.17
Clark, J.D.18
McKew, J.C.19
-
18
-
-
30444460888
-
2α: Hit to lead optimization
-
DOI 10.1021/jm0507882
-
McKew, J. C.; Foley, M. A.; Thakker, P.; Behnke, M. L.; Lovering, F. E.; Sum, F. W.; Tam, S.; Wu, K.; Shen, M. W.; Zhang, W.; Gonzalez, M.; Liu, S.; Mahadevan, A.; Sard, H.; Khor, S. P.; Clark, J. D. Inhibition of cytosolic phospholipase A2a: Hit to lead optimization. J. Med. Chem. 2006, 49, 135-158. (Pubitemid 43077328)
-
(2006)
Journal of Medicinal Chemistry
, vol.49
, Issue.1
, pp. 135-158
-
-
McKew, J.C.1
Foley, M.A.2
Thakker, P.3
Behnke, M.L.4
Lovering, F.E.5
Sum, F.-W.6
Tam, S.7
Wu, K.8
Shen, M.W.H.9
Zhang, W.10
Gonzalez, M.11
Liu, S.12
Mahadevan, A.13
Sard, H.14
Khor, S.P.15
Clark, J.D.16
-
19
-
-
0344064798
-
2α inhibitors: Substrate mimetics
-
DOI 10.1016/j.bmcl.2003.08.070
-
McKew, J. C.; Lovering, F.; Clark, J. D.; Bemis, J.; Xiang, Y.; Shen, M.; Zhang, W.; Alvarez, J. C.; Joseph-McCarthy, D. Structureactivity relationships of indole cytosolic phospholipase A2a inhibitors: Substrate mimetics. Bioorg. Med. Chem. Lett. 2003, 13, 4501-4504. (Pubitemid 37490845)
-
(2003)
Bioorganic and Medicinal Chemistry Letters
, vol.13
, Issue.24
, pp. 4501-4504
-
-
McKew, J.C.1
Lovering, F.2
Clark, J.D.3
Bemis, J.4
Xiang, Y.5
Shen, M.6
Zhang, W.7
Alvarez, J.C.8
Joseph-McCarthy, D.9
-
20
-
-
0036566182
-
2α, pyrrophenone
-
DOI 10.1042/0264-6021:3630727
-
Ono, T.; Yamada, K.; Chikazawa, Y.; Ueno, M.; Nakamoto, S.; Okuno, T.; Seno, K. Characterization of a novel inhibitor of cytosolic phospholipase A2a, pyrrophenone. Biochem. J. 2002, 363, 727-735. (Pubitemid 34526393)
-
(2002)
Biochemical Journal
, vol.363
, Issue.3
, pp. 727-735
-
-
Ono, T.1
Yamada, K.2
Chikazawa, Y.3
Ueno, M.4
Nakamoto, S.5
Okuno, T.6
Seno, K.7
-
21
-
-
0035952312
-
2. Part 2: Synthesis of potent and crystallized 4-triphenylmethylthio derivative 'pyrrophenone'
-
DOI 10.1016/S0960-894X(01)00003-8, PII S0960894X01000038
-
Seno, K.; Okuno, T.; Nishi, K.; Murakami, Y.; Yamada, K.; Nakamoto, S.; Ono, T. Pyrrolidine inhibitors of human cytosolic phospholipase A2. Part 2: Synthesis of potent and crystallized 4-triphenylmethylthio derivative 'pyrrophenone'. Bioorg. Med. Chem. Lett. 2001, 11, 587-590. (Pubitemid 32165238)
-
(2001)
Bioorganic and Medicinal Chemistry Letters
, vol.11
, Issue.4
, pp. 587-590
-
-
Eno, K.1
Okuno, T.2
Nishi, K.3
Murakami, Y.4
Yamada, K.5
Nakamoto, S.6
Ono, T.7
-
22
-
-
0034704801
-
2 [1]
-
DOI 10.1021/jm9905155
-
Seno, K.; Okuno, T.; Nishi, K.; Murakami, Y.; Watanabe, F.; Matsuura, T.; Wada, M.; Fujii, Y.; Yamada, M.; Ogawa, T.; Okada, T.; Hashizume, H.; Kii, M.; Hara, S.; Hagishita, S.; Nakamoto, S.; Yamada, K.; Chikazawa, Y.; Ueno, M.; Teshirogi, I.; Ono, T.; Ohtani, M. Pyrrolidine inhibitors of human cytosolic phospholipase A2. J. Med. Chem. 2000, 43, 1041-1044. (Pubitemid 30173729)
-
(2000)
Journal of Medicinal Chemistry
, vol.43
, Issue.6
, pp. 1041-1044
-
-
Seno, K.1
Okuno, T.2
Nishi, K.3
Murakami, Y.4
Watanabe, F.5
Matsuura, T.6
Wada, M.7
Fujii, Y.8
Yamada, M.9
Ogawa, T.10
Okada, T.11
Hashizume, H.12
Kii, M.13
Hara, S.-I.14
Hagishita, S.15
Nakamoto, S.16
Yamada, K.17
Chikazawa, Y.18
Ueno, M.19
Teshirogi, I.20
Ono, T.21
Ohtani, M.22
more..
-
23
-
-
0037075831
-
2 based on a 1,3-disubstituted propan-2-one skeleton
-
DOI 10.1021/jm011050x
-
Connolly, S.; Bennion, C.; Botterell, S.; Croshaw, P. J.; Hallam, C.; Hardy, K.; Hartopp, P.; Jackson, C. G.; King, S. J.; Lawrence, L.; Mete, A.; Murray, D.; Robinson, D. H.; Smith, G. M.; Stein, L.; Walters, I.; Wells, E.; Withnall, W. J. Design and synthesis of a novel and potent series of inhibitors of cytosolic phospholipase A2 based on a 1,3-disubstituted propan-2-one skeleton. J. Med. Chem. 2002, 45, 1348-1362. (Pubitemid 34263571)
-
(2002)
Journal of Medicinal Chemistry
, vol.45
, Issue.6
, pp. 1348-1362
-
-
Connolly, S.1
Bennion, C.2
Botterell, S.3
Croshaw, P.J.4
Hallam, C.5
Hardy, K.6
Hartopp, P.7
Jackson, C.G.8
King, S.J.9
Lawrence, L.10
Mete, A.11
Murray, D.12
Robinson, D.H.13
Smith, G.M.14
Stein, L.15
Walters, I.16
Wells, E.17
Withnall, W.J.18
-
24
-
-
41649107806
-
2α: Synthesis, biological activity, metabolic stability, and solubility
-
DOI 10.1016/j.bmc.2008.02.019, PII S0968089608001296
-
Fritsche, A.; Elfringhoff, A. S.; Fabian, J.; Lehr, M. 1-(2-Carboxyindol-5-yloxy)propan-2-ones as inhibitors of human cytosolic phospholipase A2a: Synthesis, biological activity, metabolic stability, and solubility. Bioorg. Med. Chem. 2008, 16, 3489-3500. (Pubitemid 351484053)
-
(2008)
Bioorganic and Medicinal Chemistry
, vol.16
, Issue.7
, pp. 3489-3500
-
-
Fritsche, A.1
Elfringhoff, A.S.2
Fabian, J.3
Lehr, M.4
-
25
-
-
33947111963
-
2α: Bioisosteric replacement of the carboxylic acid and carboxamide moiety
-
DOI 10.1016/j.bmc.2007.02.016, PII S0968089607001174
-
Hess, M.; Schulze Elfringhoff, A.; Lehr, M. 1-(5-Carboxy-and 5-carbamoylindol-1-yl)propan-2-ones as inhibitors of human cytosolic phospholipase A2a: Bioisosteric replacement of the carboxylic acid and carboxamide moiety. Bioorg. Med. Chem. 2007, 15, 2883-2891. (Pubitemid 46400471)
-
(2007)
Bioorganic and Medicinal Chemistry
, vol.15
, Issue.8
, pp. 2883-2891
-
-
Hess, M.1
Schulze Elfringhoff, A.2
Lehr, M.3
-
26
-
-
33646146486
-
Design and synthesis of 1-indol-1-yl-propan-2-ones as inhibitors of human cytosolic phospholipase A2a
-
Ludwig, J.; Bovens, S.; Brauch, C.; Elfringhoff, A. S.; Lehr, M. Design and synthesis of 1-indol-1-yl-propan-2-ones as inhibitors of human cytosolic phospholipase A2a. J. Med. Chem. 2006, 49, 2611-2620.
-
(2006)
J. Med. Chem.
, vol.49
, pp. 2611-2620
-
-
Ludwig, J.1
Bovens, S.2
Brauch, C.3
Elfringhoff, A.S.4
Lehr, M.5
-
27
-
-
34548125295
-
2
-
DOI 10.1021/jm0613673
-
Six, D. A.; Barbayianni, E.; Loukas, V.; Constantinou-Kokotou, V.; Hadjipavlou-Litina, D.; Stephens, D.; Wong, A. C.; Magrioti, V.; Moutevelis-Minakakis, P.; Baker, S. F.; Dennis, E. A.; Kokotos, G. Structure-activity relationship of 2-oxoamide inhibition of group IVA cytosolic phospholipase A2 and group V secreted phospholipase A2. J. Med. Chem. 2007, 50, 4222-4235. (Pubitemid 47301753)
-
(2007)
Journal of Medicinal Chemistry
, vol.50
, Issue.17
, pp. 4222-4235
-
-
Six, D.A.1
Barbayianni, E.2
Loukas, V.3
Constantinou-Kokotou, V.4
Hadjipavlou-Litina, D.5
Stephens, D.6
Wong, A.C.7
Magrioti, V.8
Moutevelis-Minakakis, P.9
Baker, S.F.10
Dennis, E.A.11
Kokotos, G.12
-
28
-
-
33646461525
-
Differential inhibition of group IVA and group VIA phospholipases A2 by 2-oxoamides
-
Stephens, D.; Barbayianni, E.; Constantinou-Kokotou, V.; Peristeraki, A.; Six, D. A.; Cooper, J.; Harkewicz, R.; Deems, R. A.; Dennis, E. A.; Kokotos, G. Differential inhibition of group IVA and group VIA phospholipases A2 by 2-oxoamides. J. Med. Chem. 2006, 49, 2821-2828.
-
(2006)
J. Med. Chem.
, vol.49
, pp. 2821-2828
-
-
Stephens, D.1
Barbayianni, E.2
Constantinou-Kokotou, V.3
Peristeraki, A.4
Six, D.A.5
Cooper, J.6
Harkewicz, R.7
Deems, R.A.8
Dennis, E.A.9
Kokotos, G.10
-
29
-
-
29244483379
-
2 release
-
DOI 10.1124/jpet.105.091686
-
Yaksh, T. L.; Kokotos, G.; Svensson, C. I.; Stephens, D.; Kokotos, C. G.; Fitzsimmons, B.; Hadjipavlou-Litina, D.; Hua, X. Y.; Dennis, E. A. Systemic and intrathecal effects of a novel series of phospholipase A2 inhibitors on hyperalgesia and spinal prostaglandin E2 release. J. Pharmacol. Exp. Ther. 2006, 316, 466-75. (Pubitemid 41832627)
-
(2006)
Journal of Pharmacology and Experimental Therapeutics
, vol.316
, Issue.1
, pp. 466-475
-
-
Yaksh, T.L.1
Kokotos, G.2
Svensson, C.I.3
Stephens, D.4
Kokotos, C.G.5
Fitzsimmons, B.6
Hadjipavlou-Litina, D.7
Hua, X.-Y.8
Dennis, E.A.9
-
30
-
-
21844449394
-
Synthesis and activity of 2-oxoamides containing long chain β-amino acids
-
DOI 10.1002/psc.628
-
Constantinou-Kokotou, V.; Peristeraki, A.; Kokotos, C. G.; Six, D. A.; Dennis, E. A. Synthesis and activity of 2-oxoamides containing long chain beta-amino acids. J. Pept. Sci. 2005, 11, 431-5. (Pubitemid 40959944)
-
(2005)
Journal of Peptide Science
, vol.11
, Issue.7
, pp. 431-435
-
-
Constantinou-Kokotou, V.1
Peristeraki, A.2
Kokotos, C.G.3
Six, D.A.4
Dennis, E.A.5
-
31
-
-
3042599028
-
2 by novel 2-oxoamides in vitro, in cells, and in vivo
-
DOI 10.1021/jm030485c
-
Kokotos, G.; Six, D. A.; Loukas, V.; Smith, T.; Constantinou-Kokotou, V.; Hadjipavlou-Litina, D.; Kotsovolou, S.; Chiou, A.; Beltzner, C. C.; Dennis, E. A. Inhibition of group IVA cytosolic phospholipase A2 by novel 2-oxoamides in vitro, in cells, and in vivo. J. Med. Chem. 2004, 47, 3615-3628. (Pubitemid 38822023)
-
(2004)
Journal of Medicinal Chemistry
, vol.47
, Issue.14
, pp. 3615-3628
-
-
Kokotos, G.1
Six, D.A.2
Loukas, V.3
Smith, T.4
Constantinou-Kokotou, V.5
Hadjipavlou-Litina, D.6
Kotsovolou, S.7
Chiou, A.8
Beltzner, C.C.9
Dennis, E.A.10
-
32
-
-
0037019263
-
2
-
DOI 10.1021/jm025538p
-
Kokotos, G.; Kotsovolou, S.; Six, D. A.; Constantinou-Kokotou, V.; Beltzner, C. C.; Dennis, E. A. Novel 2-oxoamide inhibitors of human group IVA phospholipase A2. J. Med. Chem. 2002, 45, 2891-2893. (Pubitemid 34721512)
-
(2002)
Journal of Medicinal Chemistry
, vol.45
, Issue.14
, pp. 2891-2893
-
-
Kokotos, G.1
Kotsovolou, S.2
Six, D.A.3
Constantinou-Kokotou, V.4
Beltzner, C.C.5
Dennis, E.A.6
-
33
-
-
79957960050
-
The application of rational design on phospholipase A2 inhibitors
-
Mouchlis, V. D.; Barbayianni, E.; Mavromoustakos, T. M.; Kokotos, G. The application of rational design on phospholipase A2 inhibitors. Curr. Med. Chem. 2011, 18, 2566-82.
-
(2011)
Curr. Med. Chem.
, vol.18
, pp. 2566-2582
-
-
Mouchlis, V.D.1
Barbayianni, E.2
Mavromoustakos, T.M.3
Kokotos, G.4
-
34
-
-
78651495884
-
Inhibition of secreted phospholipases A2 by 2-oxoamides based on a-amino acids: Synthesis, in vitro evaluation and molecular docking calculations
-
Mouchlis, V. D.; Magrioti, V.; Barbayianni, E.; Cermak, N.; Oslund, R. C.; Mavromoustakos, T. M.; Gelb, M. H.; Kokotos, G. Inhibition of secreted phospholipases A2 by 2-oxoamides based on a-amino acids: Synthesis, in vitro evaluation and molecular docking calculations. Bioorg. Med. Chem. 2011, 19, 735-743.
-
Bioorg. Med. Chem. 2011
, vol.19
, pp. 735-743
-
-
Mouchlis, V.D.1
Magrioti, V.2
Barbayianni, E.3
Cermak, N.4
Oslund, R.C.5
Mavromoustakos, T.M.6
Gelb, M.H.7
Kokotos, G.8
-
35
-
-
77957244309
-
Molecular docking and 3D-QSAR CoMFA studies on indole inhibitors of GIIA secreted phospholipase A2
-
Mouchlis, V. D.; Mavromoustakos, T. M.; Kokotos, G. Molecular Docking and 3D-QSAR CoMFA Studies on Indole Inhibitors of GIIA Secreted Phospholipase A2. J. Chem. Inf. Model. 2010, 50, 1589-1601.
-
(2010)
J. Chem. Inf. Model.
, vol.50
, pp. 1589-1601
-
-
Mouchlis, V.D.1
Mavromoustakos, T.M.2
Kokotos, G.3
-
36
-
-
77950916360
-
Design of new secreted phospholipase A2 inhibitors based on docking calculations by modifying the pharmacophore segments of the FPL67047XX inhibitor
-
Mouchlis, V. D.; Mavromoustakos, T. M.; Kokotos, G. Design of new secreted phospholipase A2 inhibitors based on docking calculations by modifying the pharmacophore segments of the FPL67047XX inhibitor. J. Comput.-Aided Mol. Des. 2010, 24, 107-115.
-
(2010)
J. Comput.-Aided Mol. Des.
, vol.24
, pp. 107-115
-
-
Mouchlis, V.D.1
Mavromoustakos, T.M.2
Kokotos, G.3
-
37
-
-
33744462072
-
2 inhibitors. A modeling approach to select new and specific anti-inflammatory drugs
-
Pintore, M.; Mombelli, E.; Wechman, C.; Chretien, J. R. 3D QSAR Study of Human PLA2 Inhibitors. A Modeling Approach to Select New and Specific Anti-Inflammatory Drugs. Anti-Inflammatory Anti-Allergy Agents Med. Chem. 2006, 5, 175-187. (Pubitemid 43803136)
-
(2006)
Anti-Inflammatory and Anti-Allergy Agents in Medicinal Chemistry
, vol.5
, Issue.2
, pp. 175-187
-
-
Pintore, M.1
Mombelli, E.2
Wechman, C.3
Chretien, J.R.4
-
38
-
-
33646061599
-
1,2,4-Oxadiazolidin-3,5-diones and 1,3,5-triazin-2,4,6-triones as cytosolic phospholipase A2a inhibitors
-
Gopalsamy, A.; Yang, H.; Ellingboe, J. W.; McKew, J. C.; Tam, S.; Joseph-McCarthy, D.; Zhang, W.; Shen, M.; Clark, J. D. 1,2,4-Oxadiazolidin-3,5- diones and 1,3,5-triazin-2,4,6-triones as cytosolic phospholipase A2a inhibitors. Bioorg. Med. Chem. Lett. 2006, 16, 2978-2981.
-
(2006)
Bioorg. Med. Chem. Lett.
, vol.16
, pp. 2978-2981
-
-
Gopalsamy, A.1
Yang, H.2
Ellingboe, J.W.3
McKew, J.C.4
Tam, S.5
Joseph-McCarthy, D.6
Zhang, W.7
Shen, M.8
Clark, J.D.9
-
39
-
-
67650540778
-
Location of inhibitors bound to group IVA phospholipase A2 determined by molecular dynamics and deuterium exchange mass spectrometry
-
Burke, J. E.; Babakhani, A.; Gorfe, A. A.; Kokotos, G.; Li, S.; Woods, V. L. Jr.; McCammon, J. A.; Dennis, E. A. Location of inhibitors bound to group IVA phospholipase A2 determined by molecular dynamics and deuterium exchange mass spectrometry. J. Am. Chem. Soc. 2009, 131, 8083-8091.
-
(2009)
J. Am. Chem. Soc.
, vol.131
, pp. 8083-8091
-
-
Burke, J.E.1
Babakhani, A.2
Gorfe, A.A.3
Kokotos, G.4
Li, S.5
Woods Jr., V.L.6
McCammon, J.A.7
Dennis, E.A.8
-
40
-
-
84855634330
-
-
version 9.7; Schrödinger, LLC: New York
-
MacroModel, version 9.7; Schrödinger, LLC: New York, 2009.
-
(2009)
MacroModel
-
-
-
41
-
-
0034680520
-
Synthesis of 2-Oxo amide triacylglycerol analogues and study of their inhibition effect on pancreatic and gastric lipases
-
Kokotos, G.; Verger, R.; Chiou, A. Synthesis of 2-Oxo amide triacylglycerol analogues and study of their inhibition effect on pancreatic and gastric lipases. Chemistry 2000, 6, 4211-7.
-
(2000)
Chemistry
, vol.6
, pp. 4211-4217
-
-
Kokotos, G.1
Verger, R.2
Chiou, A.3
-
42
-
-
84858033708
-
-
version 2.0; Schrödinger, LLC: New York, 2009. Impact, version 5.5; Schrödinger, LLC: New York, 2009. Prime, version 2.1; Schrödinger, LLC: New York
-
Schrödinger Suite 2009 Protein Preparation Wizard; Epik, version 2.0; Schrödinger, LLC: New York, 2009. Impact, version 5.5; Schrödinger, LLC: New York, 2009. Prime, version 2.1; Schrödinger, LLC: New York, 2009.
-
(2009)
Schrödinger Suite 2009 Protein Preparation Wizard; Epik
-
-
-
43
-
-
84858022769
-
-
version 8.0; Tripos Inc.: St. Louis, MO
-
SYBYL; version 8.0; Tripos Inc.: St. Louis, MO, 2007.
-
(2007)
SYBYL
-
-
-
44
-
-
26444479778
-
Optimization by simulated annealing
-
Kirkpatrick, S.; Gelatt, C. D. Jr.; Vecchi, M. P. Optimization by Simulated Annealing. Science 1983, 220, 671-680.
-
(1983)
Science
, vol.220
, pp. 671-680
-
-
Kirkpatrick, S.1
Gelatt Jr., C.D.2
Vecchi, M.P.3
-
45
-
-
0037434582
-
Surflex: Fully automatic flexible molecular docking using a molecular similarity-based search engine
-
DOI 10.1021/jm020406h
-
Jain, A. N. Surflex: Fully automatic flexible molecular docking using a molecular similarity-based search engine. J. Med. Chem. 2003, 46, 499-511. (Pubitemid 36182752)
-
(2003)
Journal of Medicinal Chemistry
, vol.46
, Issue.4
, pp. 499-511
-
-
Jain, A.N.1
-
46
-
-
0030255303
-
Scoring noncovalent protein-ligand interactions: A continuous differentiable function tuned to compute binding affinities
-
Jain, A. N. Scoring noncovalent protein-ligand interactions: A continuous differentiable function tuned to compute binding affinities. J. Comput.-Aided Mol. Des. 1996, 10, 427-40. (Pubitemid 126712439)
-
(1996)
Journal of Computer-Aided Molecular Design
, vol.10
, Issue.5
, pp. 427-440
-
-
Jain, A.N.1
-
47
-
-
84858059583
-
-
version 2.0; Schrödinger, LLC: New York
-
Epik, version 2.0; Schrödinger, LLC: New York, 2009.
-
(2009)
Epik
-
-
-
48
-
-
37749011993
-
Epik: A software program for pKa prediction and protonation state generation for drug-like molecules
-
Shelley, J. C.; Cholleti, A.; Frye, L. L.; Greenwood, J. R.; Timlin, M. R.; Uchimaya, M. Epik: A software program for pKa prediction and protonation state generation for drug-like molecules. J. Comput.-Aided Mol. Des. 2007, 21, 681-91.
-
(2007)
J. Comput.-Aided Mol. Des.
, vol.21
, pp. 681-691
-
-
Shelley, J.C.1
Cholleti, A.2
Frye, L.L.3
Greenwood, J.R.4
Timlin, M.R.5
Uchimaya, M.6
-
49
-
-
84988115618
-
Validation of the general purpose tripos 5.2 force field
-
Clark, M.; Crammer, D. R. III; Van Opdenbosch, N. Validation of the general purpose tripos 5.2 force field. J. Comput. Chem. 1989, 10, 982-1012.
-
(1989)
J. Comput. Chem.
, vol.10
, pp. 982-1012
-
-
Clark, M.1
Crammer III, D.R.2
Van Opdenbosch, N.3
-
50
-
-
33846446220
-
Restart procedures for the conjugate gradient method
-
Powell, D. J. M. Restart procedures for the conjugate gradient method. Math. Program. 1977, 12, 241-254.
-
(1977)
Math. Program.
, vol.12
, pp. 241-254
-
-
Powell, D.J.M.1
-
51
-
-
84858040276
-
-
version 8.0; Tripos Inc.: St. Louis, MO
-
SYBYL/Surflex-Dock, version 8.0; Tripos Inc.: St. Louis, MO, 2007.
-
(2007)
SYBYL/Surflex-Dock
-
-
-
52
-
-
0030154893
-
Hammerhead: Fast, fully automated docking of flexible ligands to protein binding sites
-
Welch, W.; Ruppert, J.; Jain, A. N. Hammerhead: Fast, fully automated docking of flexible ligands to protein binding sites. Chem. Biol. 1996, 3, 449-62. (Pubitemid 126663345)
-
(1996)
Chemistry and Biology
, vol.3
, Issue.6
, pp. 449-462
-
-
Welch, W.1
Ruppert, J.2
Jain, A.N.3
-
53
-
-
0001903222
-
Note sur la Convergence de Méthodes de directions conjuguées
-
Polak, E.; Ribiere, G. Note sur la Convergence de Méthodes de Directions Conjuguées. Rev. Fr. Inf. Rech. Operat., Ser. Rouge 1969, 16, 35-43.
-
(1969)
Rev. Fr. Inf. Rech. Operat. Ser. Rouge
, vol.16
, pp. 35-43
-
-
Polak, E.1
Ribiere, G.2
-
54
-
-
0035913529
-
Evaluation and reparametrization of the OPLS-AA force field for proteins via comparison with accurate quantum chemical calculations on peptides
-
DOI 10.1021/jp003919d
-
Kaminski, G. A.; Friesner, R. A.; Tirado-Rives, J.; Jorgensen, W. L. Evaluation and Reparametrization of the OPLS-AA Force Field for Proteins via Comparison with Accurate Quantum Chemical Calculations on Peptides. J. Phys. Chem. B 2001, 105, 6474-6487. (Pubitemid 35339015)
-
(2001)
Journal of Physical Chemistry B
, vol.105
, Issue.28
, pp. 6474-6487
-
-
Kaminski, G.A.1
Friesner, R.A.2
Tirado-Rives, J.3
Jorgensen, W.L.4
-
55
-
-
0029912748
-
Development and testing of the OPLS all-atom force field on conformational energetics and properties of organic liquids
-
DOI 10.1021/ja9621760, PII S0002786396021762
-
Jorgensen, W. L.; Maxwell, D. S.; Tirado-Rives, J. Development and Testing of the OPLS All-Atom Force Field on Conformational Energetics and Properties of Organic Liquids. J. Am. Chem. Soc. 1996, 118, 11225-11236. (Pubitemid 26399746)
-
(1996)
Journal of the American Chemical Society
, vol.118
, Issue.45
, pp. 11225-11236
-
-
Jorgensen, W.L.1
Maxwell, D.S.2
Tirado-Rives, J.3
-
56
-
-
33645941402
-
The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin
-
Jorgensen, W. L.; Tirado-Rives, J. The OPLS [optimized potentials for liquid simulations] potential functions for proteins, energy minimizations for crystals of cyclic peptides and crambin. J. Am. Chem. Soc. 1988, 110, 1657-1666.
-
(1988)
J. Am. Chem. Soc.
, vol.110
, pp. 1657-1666
-
-
Jorgensen, W.L.1
Tirado-Rives, J.2
-
57
-
-
0344778061
-
Semianalytical treatment of solvation for molecular mechanics and dynamics
-
Still, W. C.; Tempczyk, A.; Hawley, R. C.; Hendrickson, T. Semianalytical treatment of solvation for molecular mechanics and dynamics. J. Am. Chem. Soc. 1990, 112, 6127-6129.
-
(1990)
J. Am. Chem. Soc.
, vol.112
, pp. 6127-6129
-
-
Still, W.C.1
Tempczyk, A.2
Hawley, R.C.3
Hendrickson, T.4
|