-
1
-
-
77649090565
-
Identification of arginine-and lysine-methylation in the proteome of Saccharomyces cerevisiae and its functional implications
-
Pang, C.N., Gasteiger, E. and Wilkins, M.R. (2010) Identification of arginine-and lysine-methylation in the proteome of Saccharomyces cerevisiae and its functional implications. BMC Genomics, 11, 92.
-
(2010)
BMC Genomics
, vol.11
, pp. 92
-
-
Pang, C.N.1
Gasteiger, E.2
Wilkins, M.R.3
-
2
-
-
34447581084
-
Methylation of proteins involved in translation
-
DOI 10.1111/j.1365-2958.2007.05831.x
-
Polevoda, B. and Sherman, F. (2007) Methylation of proteins involved in translation. Mol. Microbiol., 65, 590-606. (Pubitemid 47077239)
-
(2007)
Molecular Microbiology
, vol.65
, Issue.3
, pp. 590-606
-
-
Polevoda, B.1
Sherman, F.2
-
3
-
-
0038374971
-
Many paths to methyltransfer: A chronicle of convergence
-
DOI 10.1016/S0968-0004(03)00090-2
-
Schubert, H.L., Blumenthal, R.M. and Cheng, X. (2003) Many paths to methyltransfer: a chronicle of convergence. Trends Biochem. Sci., 28, 329-335. (Pubitemid 36776296)
-
(2003)
Trends in Biochemical Sciences
, vol.28
, Issue.6
, pp. 329-335
-
-
Schubert, H.L.1
Blumenthal, R.M.2
Cheng, X.3
-
4
-
-
0034672060
-
A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation
-
DOI 10.1093/emboj/19.24.6900
-
Dincbas-Renqvist, V., Engstrom, A., Mora, L., Heurgue-Hamard, V., Buckingham, R. and Ehrenberg, M. (2000) A post-translational modification in the GGQ motif of RF2 from Escherichia coli stimulates termination of translation. EMBO J., 19, 6900-6907. (Pubitemid 32011683)
-
(2000)
EMBO Journal
, vol.19
, Issue.24
, pp. 6900-6907
-
-
Dincbas-Renqvist, V.1
Engstrom, A.2
Mora, L.3
Heurgue-Hamard, V.4
Buckingham, R.5
Ehrenberg, M.6
-
5
-
-
13244259475
-
The glutamine residue of the conserved GGQ motif in Saccharomyces cerevisiae release factor eRF1 is methylated by the product of the YDR140w gene
-
DOI 10.1074/jbc.M407252200
-
Heurgue-Hamard, V., Champ, S., Mora, L., Merkulova-Rainon, T., Kisselev, L.L. and Buckingham, R.H. (2005) The glutamine residue of the conserved GGQ motif in Saccharomyces cerevisiae release factor eRF1 is methylated by the product of the YDR140w gene. J. Biol. Chem., 280, 2439-2445. (Pubitemid 40189343)
-
(2005)
Journal of Biological Chemistry
, vol.280
, Issue.4
, pp. 2439-2445
-
-
Heurgue-Hamard, V.1
Champ, S.2
Mora, L.3
Merkoulova-Rainon, T.4
Kisselev, L.L.5
Buckingham, R.H.6
-
6
-
-
0034603210
-
The crystal structure of human eukaryotic release factor eRF1 - Mechanism of stop codon recognition and peptidyl-tRNA hydrolysis
-
Song, H., Mugnier, P., Das, A.K., Webb, H.M., Evans, D.R., Tuite, M.F., Hemmings, B.A. and Barford, D. (2000) The crystal structure of human eukaryotic release factor eRF1-mechanism of stop codon recognition and peptidyl-tRNA hydrolysis. Cell, 100, 311-321. (Pubitemid 30353087)
-
(2000)
Cell
, vol.100
, Issue.3
, pp. 311-321
-
-
Song, H.1
Mugnier, P.2
Das, A.K.3
Webb, H.M.4
Evans, D.R.5
Tuite, M.F.6
Hemmings, B.A.7
Barford, D.8
-
7
-
-
0035697089
-
Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1
-
DOI 10.1016/S1097-2765(01)00415-4
-
Vestergaard, B., Van, L.B., Andersen, G.R., Nyborg, J., Buckingham, R.H. and Kjeldgaard, M. (2001) Bacterial polypeptide release factor RF2 is structurally distinct from eukaryotic eRF1. Mol. Cell, 8, 1375-1382. (Pubitemid 34085006)
-
(2001)
Molecular Cell
, vol.8
, Issue.6
, pp. 1375-1382
-
-
Vestergaard, B.1
Van, L.B.2
Andersen, G.R.3
Nyborg, J.4
Buckingham, R.H.5
Kjeldgaard, M.6
-
9
-
-
0032840382
-
Mutations in the highly conserved GGQ motif of class I polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis
-
DOI 10.1017/S135583829999043X
-
Frolova, L.Y., Tsivkovskii, R.Y., Sivolobova, G.F., Oparina, N.Y., Serpinsky, O.I., Blinov, V.M., Tatkov, S.I. and Kisselev, L.L. (1999) Mutations in the highly conserved GGQ motif of class 1 polypeptide release factors abolish ability of human eRF1 to trigger peptidyl-tRNA hydrolysis. RNA, 5, 1014-1020. (Pubitemid 29365331)
-
(1999)
RNA
, vol.5
, Issue.8
, pp. 1014-1020
-
-
Frolova, L.Y.1
Tsivkovskii, R.Y.2
Sivolobova, G.F.3
Oparina, N.Y.4
Serpinsky, O.I.5
Blinov, V.M.6
Tatkov, S.I.7
Kisselev, L.L.8
-
10
-
-
77955431163
-
Recognition of the amber UAG stop codon by release factor RF1
-
Korostelev, A., Zhu, J., Asahara, H. and Noller, H.F. (2010) Recognition of the amber UAG stop codon by release factor RF1. EMBO J., 29, 2577-2585.
-
(2010)
EMBO J.
, vol.29
, pp. 2577-2585
-
-
Korostelev, A.1
Zhu, J.2
Asahara, H.3
Noller, H.F.4
-
11
-
-
77749322692
-
Structural and mechanistic insights into translation termination
-
Loh, P.G. and Song, H. (2010) Structural and mechanistic insights into translation termination. Curr. Opin. Struct. Biol., 20, 98-103.
-
(2010)
Curr. Opin. Struct. Biol.
, vol.20
, pp. 98-103
-
-
Loh, P.G.1
Song, H.2
-
12
-
-
0037084101
-
5 -glutamine methyltransferase that modifies peptide release factors
-
DOI 10.1093/emboj/21.4.769
-
Heurgue-Hamard, V., Champ, S., Engsto, A., Ehrenberg, M. and Buckingham, R.H. (2002) The hemK gene in Escherichia coli encodes the N(5)-glutamine methyltransferase that modifies peptide release factors. EMBO J., 21, 769-778. (Pubitemid 34174057)
-
(2002)
EMBO Journal
, vol.21
, Issue.4
, pp. 769-778
-
-
Heurgue-Hamard, V.1
Champ, S.2
Engstrom, A.3
Ehrenberg, M.4
Buckingham, R.H.5
-
13
-
-
0037022398
-
HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination
-
DOI 10.1073/pnas.032488499
-
Nakahigashi, K., Kubo, N., Narita, S., Shimaoka, T., Goto, S., Oshima, T., Mori, H., Maeda, M., Wada, C. and Inokuchi, H. (2002) HemK, a class of protein methyl transferase with similarity to DNA methyl transferases, methylates polypeptide chain release factors, and hemK knockout induces defects in translational termination. Proc. Natl Acad. Sci. USA, 99, 1473-1478. (Pubitemid 34136517)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.3
, pp. 1473-1478
-
-
Nakahigashi, K.1
Kubo, N.2
Narita, S.-I.3
Shimaoka, T.4
Goto, S.5
Oshima, T.6
Mori, H.7
Maeda, M.8
Wada, C.9
Inokuchi, H.10
-
14
-
-
29144491478
-
Molecular basis for bacterial class I release factor methylation by PrmC
-
DOI 10.1016/j.molcel.2005.10.025, PII S109727650501720X
-
Graille, M., Heurgue-Hamard, V., Champ, S., Mora, L., Scrima, N., Ulryck, N., van Tilbeurgh, H. and Buckingham, R.H. (2005) Molecular basis for bacterial class I release factor methylation by PrmC. Mol. Cell, 20, 917-927. (Pubitemid 41814880)
-
(2005)
Molecular Cell
, vol.20
, Issue.6
, pp. 917-927
-
-
Graille, M.1
Heurgue-Hamard, V.2
Champ, S.3
Mora, L.4
Scrima, N.5
Ulryck, N.6
Van Tilbeurgh, H.7
Buckingham, R.H.8
-
15
-
-
0038629269
-
5 -glutamine AdoMet-dependent methyltransferase
-
DOI 10.1021/bi034026p
-
Schubert, H.L., Phillips, J.D. and Hill, C.P. (2003) Structures along the catalytic pathway of PrmC/HemK, an N5-glutamine AdoMet-dependent methyltransferase. Biochemistry, 42, 5592-5599. (Pubitemid 36582849)
-
(2003)
Biochemistry
, vol.42
, Issue.19
, pp. 5592-5599
-
-
Schubert, H.L.1
Phillips, J.D.2
Hill, C.P.3
-
16
-
-
37249066982
-
Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo
-
DOI 10.1074/jbc.M706076200
-
Mora, L., Heurgue-Hamard, V., de Zamaroczy, M., Kervestin, S. and Buckingham, R.H. (2007) Methylation of bacterial release factors RF1 and RF2 is required for normal translation termination in vivo. J. Biol. Chem., 282, 35638-35645. (Pubitemid 350277100)
-
(2007)
Journal of Biological Chemistry
, vol.282
, Issue.49
, pp. 35638-35645
-
-
Mora, L.1
Heurgue-Hamard, V.2
De Zamaroczy, M.3
Kervestin, S.4
Buckingham, R.H.5
-
17
-
-
77952685666
-
Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release
-
Jin, H., Kelley, A.C., Loakes, D. and Ramakrishnan, V. (2010) Structure of the 70S ribosome bound to release factor 2 and a substrate analog provides insights into catalysis of peptide release. Proc. Natl Acad. Sci. USA, 107, 8593-8598.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 8593-8598
-
-
Jin, H.1
Kelley, A.C.2
Loakes, D.3
Ramakrishnan, V.4
-
18
-
-
34548227759
-
A Model for How Ribosomal Release Factors Induce Peptidyl-tRNA Cleavage in Termination of Protein Synthesis
-
DOI 10.1016/j.molcel.2007.06.032, PII S1097276507004443
-
Trobro, S. and Aqvist, J. (2007) A model for how ribosomal release factors induce peptidyl-tRNA cleavage in termination of protein synthesis. Mol. Cell, 27, 758-766. (Pubitemid 47333221)
-
(2007)
Molecular Cell
, vol.27
, Issue.5
, pp. 758-766
-
-
Trobro, S.1
Aqvist, J.2
-
19
-
-
0032484028
-
A direct estimation of the context effect on the efficiency of termination
-
DOI 10.1006/jmbi.1998.2220
-
Pavlov, M.Y., Freistroffer, D.V., Dincbas, V., MacDougall, J., Buckingham, R.H. and Ehrenberg, M. (1998) A direct estimation of the context effect on the efficiency of termination. J. Mol. Biol., 284, 579-590. (Pubitemid 28550007)
-
(1998)
Journal of Molecular Biology
, vol.284
, Issue.3
, pp. 579-590
-
-
Pavlov, M.Yu.1
Freistroffer, D.V.2
Dincbas, V.3
MacDougall, J.4
Buckingham, R.H.5
Ehrenberg, M.6
-
20
-
-
77956622590
-
Deficiency in a glutamine-specific methyltransferase for the release factor causes mouse embryonic lethality
-
Liu, P., Nie, S., Li, B., Yang, Z.Q., Xu, Z.M., Fei, J., Lin, C., Zeng, R. and Xu, G.L. (2010) Deficiency in a glutamine-specific methyltransferase for the release factor causes mouse embryonic lethality. Mol. Cell. Biol., 30, 4245-4253.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 4245-4253
-
-
Liu, P.1
Nie, S.2
Li, B.3
Yang, Z.Q.4
Xu, Z.M.5
Fei, J.6
Lin, C.7
Zeng, R.8
Xu, G.L.9
-
21
-
-
45549090288
-
HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1
-
Figaro, S., Scrima, N., Buckingham, R.H. and Heurgue-Hamard, V. (2008) HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1. FEBS Lett., 582, 2352-2356.
-
(2008)
FEBS Lett.
, vol.582
, pp. 2352-2356
-
-
Figaro, S.1
Scrima, N.2
Buckingham, R.H.3
Heurgue-Hamard, V.4
-
22
-
-
33845988761
-
The zinc finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast
-
DOI 10.1074/jbc.M608571200
-
Heurgue-Hamard, V., Graille, M., Scrima, N., Ulryck, N., Champ, S., van Tilbeurgh, H. and Buckingham, R.H. (2006) The zinc finger protein Ynr046w is plurifunctional and a component of the eRF1 methyltransferase in yeast. J. Biol. Chem., 281, 36140-36148. (Pubitemid 46041348)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.47
, pp. 36140-36148
-
-
Heurgue-Hamard, V.1
Graille, M.2
Scrima, N.3
Ulryck, N.4
Champ, S.5
Van Tilbeurgh, H.6
Buckingham, R.H.7
-
23
-
-
33744993160
-
In Vitro Reconstitution of Eukaryotic Translation Reveals Cooperativity between Release Factors eRF1 and eRF3
-
DOI 10.1016/j.cell.2006.04.035, PII S009286740600585X
-
Alkalaeva, E.Z., Pisarev, A.V., Frolova, L.Y., Kisselev, L.L. and Pestova, T.V. (2006) In vitro reconstitution of eukaryotic translation reveals cooperativity between release factors eRF1 and eRF3. Cell, 125, 1125-1136. (Pubitemid 43866201)
-
(2006)
Cell
, vol.125
, Issue.6
, pp. 1125-1136
-
-
Alkalaeva, E.Z.1
Pisarev, A.V.2
Frolova, L.Y.3
Kisselev, L.L.4
Pestova, T.V.5
-
24
-
-
1942470550
-
Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe
-
DOI 10.1016/S1097-2765(04)00206-0, PII S1097276504002060
-
Kong, C., Ito, K., Walsh, M.A., Wada, M., Liu, Y., Kumar, S., Barford, D., Nakamura, Y. and Song, H. (2004) Crystal structure and functional analysis of the eukaryotic class II release factor eRF3 from S. pombe. Mol. Cell, 14, 233-245. (Pubitemid 38515650)
-
(2004)
Molecular Cell
, vol.14
, Issue.2
, pp. 233-245
-
-
Kong, C.1
Ito, K.2
Walsh, M.A.3
Wada, M.4
Liu, Y.5
Kumar, S.6
Barford, D.7
Nakamura, Y.8
Song, H.9
-
25
-
-
65349134642
-
Does glutamine methylation affect the intrinsic conformation of the universally conserved GGQ motif in ribosomal release factors?
-
Ander, M. and Aqvist, J. (2009) Does glutamine methylation affect the intrinsic conformation of the universally conserved GGQ motif in ribosomal release factors? Biochemistry, 48, 3483-3489.
-
(2009)
Biochemistry
, vol.48
, pp. 3483-3489
-
-
Ander, M.1
Aqvist, J.2
-
26
-
-
33646337436
-
The yeast translation release factors Mrf1p and Sup45p (eRF1) are methylated, respectively, by the methyltransferases Mtq1p and Mtq2p
-
DOI 10.1074/jbc.M507651200
-
Polevoda, B., Span, L. and Sherman, F. (2006) The yeast translation release factors Mrf1p and Sup45p (eRF1) are methylated, respectively, by the methyltransferases Mtq1p and Mtq2p. J. Biol. Chem., 281, 2562-2571. (Pubitemid 43845716)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.5
, pp. 2562-2571
-
-
Polevoda, B.1
Span, L.2
Sherman, F.3
-
27
-
-
77953320100
-
Trm112p is a 15-kDa zinc finger protein essential for the activity of two tRNA and one protein methyltransferases in yeast
-
Mazauric, M.H., Dirick, L., Purushothaman, S.K., Bjork, G.R. and Lapeyre, B. (2010) Trm112p is a 15-kDa zinc finger protein essential for the activity of two tRNA and one protein methyltransferases in yeast. J. Biol. Chem., 285, 18505-18515.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 18505-18515
-
-
Mazauric, M.H.1
Dirick, L.2
Purushothaman, S.K.3
Bjork, G.R.4
Lapeyre, B.5
-
28
-
-
76449119803
-
The Arabidopsis SMO2, a homologue of yeast TRM112, modulates progression of cell division during organ growth
-
Hu, Z., Qin, Z., Wang, M., Xu, C., Feng, G., Liu, J., Meng, Z. and Hu, Y. (2010) The Arabidopsis SMO2, a homologue of yeast TRM112, modulates progression of cell division during organ growth. Plant J., 61, 600-610.
-
(2010)
Plant J.
, vol.61
, pp. 600-610
-
-
Hu, Z.1
Qin, Z.2
Wang, M.3
Xu, C.4
Feng, G.5
Liu, J.6
Meng, Z.7
Hu, Y.8
-
29
-
-
77951981033
-
Human AlkB homolog ABH8 Is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival
-
Fu, D., Brophy, J.A., Chan, C.T., Atmore, K.A., Begley, U., Paules, R.S., Dedon, P.C., Begley, T.J. and Samson, L.D. (2010) Human AlkB homolog ABH8 Is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival. Mol. Cell. Biol., 30, 2449-2459.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 2449-2459
-
-
Fu, D.1
Brophy, J.A.2
Chan, C.T.3
Atmore, K.A.4
Begley, U.5
Paules, R.S.6
Dedon, P.C.7
Begley, T.J.8
Samson, L.D.9
-
30
-
-
77952506949
-
Production of yeast (m2G10) methyltransferase (Trm11 and Trm112 complex) in a wheat germ cell-free translation system
-
Okada, K., Muneyoshi, Y., Endo, Y. and Hori, H. (2009) Production of yeast (m2G10) methyltransferase (Trm11 and Trm112 complex) in a wheat germ cell-free translation system. Nucleic Acids Symp. Ser., 53, 303-304.
-
(2009)
Nucleic Acids Symp. Ser.
, vol.53
, pp. 303-304
-
-
Okada, K.1
Muneyoshi, Y.2
Endo, Y.3
Hori, H.4
-
31
-
-
18944364447
-
Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA
-
DOI 10.1128/MCB.25.11.4359-4370.2005
-
Purushothaman, S.K., Bujnicki, J.M., Grosjean, H. and Lapeyre, B. (2005) Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA. Mol. Cell. Biol., 25, 4359-4370. (Pubitemid 40705743)
-
(2005)
Molecular and Cellular Biology
, vol.25
, Issue.11
, pp. 4359-4370
-
-
Purushothaman, S.K.1
Bujnicki, J.M.2
Grosjean, H.3
Lapeyre, B.4
-
32
-
-
77949376153
-
Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding
-
Songe-Moller, L., van den Born, E., Leihne, V., Vagbo, C.B., Kristoffersen, T., Krokan, H.E., Kirpekar, F., Falnes, P.O. and Klungland, A. (2010) Mammalian ALKBH8 possesses tRNA methyltransferase activity required for the biogenesis of multiple wobble uridine modifications implicated in translational decoding. Mol. Cell. Biol., 30, 1814-1827.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 1814-1827
-
-
Songe-Moller, L.1
Van Den Born, E.2
Leihne, V.3
Vagbo, C.B.4
Kristoffersen, T.5
Krokan, H.E.6
Kirpekar, F.7
Falnes, P.O.8
Klungland, A.9
-
33
-
-
52949102950
-
A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae
-
Huang, B., Lu, J. and Bystrom, A.S. (2008) A genome-wide screen identifies genes required for formation of the wobble nucleoside 5-methoxycarbonylmethyl-2-thiouridine in Saccharomyces cerevisiae. RNA, 14, 2183-2194.
-
(2008)
RNA
, vol.14
, pp. 2183-2194
-
-
Huang, B.1
Lu, J.2
Bystrom, A.S.3
-
34
-
-
0345060040
-
Novel Methyltransferase for Modified Uridine Residues at the Wobble Position of tRNA
-
DOI 10.1128/MCB.23.24.9283-9292.2003
-
Kalhor, H.R. and Clarke, S. (2003) Novel methyltransferase for modified uridine residues at the wobble position of tRNA. Mol. Cell. Biol., 23, 9283-9292. (Pubitemid 37499815)
-
(2003)
Molecular and Cellular Biology
, vol.23
, Issue.24
, pp. 9283-9292
-
-
Kalhor, H.R.1
Clarke, S.2
-
35
-
-
33645064276
-
TRNAGlu wobble uridine methylation by Trm9 identifies Elongator's key role for zymocin-induced cell death in yeast
-
Jablonowski, D., Zink, S., Mehlgarten, C., Daum, G. and Schaffrath, R. (2006) tRNAGlu wobble uridine methylation by Trm9 identifies Elongator's key role for zymocin-induced cell death in yeast. Mol. Microbiol., 59, 677-688.
-
(2006)
Mol. Microbiol.
, vol.59
, pp. 677-688
-
-
Jablonowski, D.1
Zink, S.2
Mehlgarten, C.3
Daum, G.4
Schaffrath, R.5
-
36
-
-
49249137305
-
TRNA and protein methylase complexes mediate zymocin toxicity in yeast
-
Studte, P., Zink, S., Jablonowski, D., Bar, C., von der Haar, T., Tuite, M.F. and Schaffrath, R. (2008) tRNA and protein methylase complexes mediate zymocin toxicity in yeast. Mol. Microbiol., 69, 1266-1277.
-
(2008)
Mol. Microbiol.
, vol.69
, pp. 1266-1277
-
-
Studte, P.1
Zink, S.2
Jablonowski, D.3
Bar, C.4
Von Der Haar, T.5
Tuite, M.F.6
Schaffrath, R.7
-
37
-
-
36749085941
-
Trm9-Catalyzed tRNA Modifications Link Translation to the DNA Damage Response
-
DOI 10.1016/j.molcel.2007.09.021, PII S1097276507006338
-
Begley, U., Dyavaiah, M., Patil, A., Rooney, J.P., DiRenzo, D., Young, C.M., Conklin, D.S., Zitomer, R.S. and Begley, T.J. (2007) Trm9-catalyzed tRNA modifications link translation to the DNA damage response. Mol. Cell, 28, 860-870. (Pubitemid 350217051)
-
(2007)
Molecular Cell
, vol.28
, Issue.5
, pp. 860-870
-
-
Begley, U.1
Dyavaiah, M.2
Patil, A.3
Rooney, J.P.4
DiRenzo, D.5
Young, C.M.6
Conklin, D.S.7
Zitomer, R.S.8
Begley, T.J.9
-
38
-
-
0031820288
-
Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae
-
DOI 10.1002/(SICI)1097-0061(199807)14:10<953::AID-YEA293>3.0.CO;2-U
-
Longtine, M.S., McKenzie, A. III, Demarini, D.J., Shah, N.G., Wach, A., Brachat, A., Philippsen, P. and Pringle, J.R. (1998) Additional modules for versatile and economical PCR-based gene deletion and modification in Saccharomyces cerevisiae. Yeast, 14, 953-961. (Pubitemid 28328001)
-
(1998)
Yeast
, vol.14
, Issue.10
, pp. 953-961
-
-
Longtine, M.S.1
McKenzie III, A.2
Demarini, D.J.3
Shah, N.G.4
Wach, A.5
Brachat, A.6
Philippsen, P.7
Pringle, J.R.8
-
39
-
-
33748933575
-
A two-step method for the introduction of single or multiple defined point mutations into the genome of Saccharomyces cerevisiae
-
DOI 10.1002/yea.1397
-
Toulmay, A. and Schneiter, R. (2006) A two-step method for the introduction of single or multiple defined point mutations into the genome of Saccharomyces cerevisiae. Yeast, 23, 825-831. (Pubitemid 44430583)
-
(2006)
Yeast
, vol.23
, Issue.11
, pp. 825-831
-
-
Toulmay, A.1
Schneiter, R.2
-
40
-
-
0028046412
-
Protein-protein interactions in the yeast pheromone response pathway: Ste5p interacts with all members of the MAP kinase cascade
-
Printen, J.A. and Sprague, G.F. Jr (1994) Protein-protein interactions in the yeast pheromone response pathway: Ste5p interacts with all members of the MAP kinase cascade. Genetics, 138, 609-619. (Pubitemid 24337789)
-
(1994)
Genetics
, vol.138
, Issue.3
, pp. 609-619
-
-
Printen, J.A.1
Sprague Jr., G.F.2
-
41
-
-
1842856565
-
-
Springer Berlin, New York
-
Wolf, K., Breunig, K. and Barth, G. (2003) Non-conventional Yeasts in Genetics, Biochemistry and Biotechnology: Practical Protocols Chapter 28. Springer, Berlin, New York, pp. 179-183.
-
(2003)
Non-conventional Yeasts in Genetics, Biochemistry and Biotechnology: Practical Protocols Chapter 28
, pp. 179-183
-
-
Wolf, K.1
Breunig, K.2
Barth, G.3
-
42
-
-
0036917889
-
SAM (dependent) I AM: The S-adenosylmethionine-dependent methyltransferase fold
-
DOI 10.1016/S0959-440X(02)00391-3
-
Martin, J.L. and McMillan, F.M. (2002) SAM (dependent) I AM: the S-adenosylmethionine-dependent methyltransferase fold. Curr. Opin. Struct. Biol., 12, 783-793. (Pubitemid 36009496)
-
(2002)
Current Opinion in Structural Biology
, vol.12
, Issue.6
, pp. 783-793
-
-
Martin, J.L.1
McMillan, F.M.2
-
43
-
-
56649103902
-
Searching protein structure databases with DaliLite v.3
-
DOI 10.1093/bioinformatics/btn507
-
Holm, L., Kaariainen, S., Rosenstrom, P. and Schenkel, A. (2008) Searching protein structure databases with DaliLite v.3. Bioinformatics, 24, 2780-2781. (Pubitemid 352722625)
-
(2008)
Bioinformatics
, vol.24
, Issue.23
, pp. 2780-2781
-
-
Holm, L.1
Kaariainen, S.2
Rosenstrom, P.3
Schenkel, A.4
-
44
-
-
3042513877
-
Structural characterization and comparative phylogenetic analysis of Escherichia coli HemK, a protein (N5)-glutamine methyltransferase
-
DOI 10.1016/j.jmb.2004.05.019, PII S002228360400587X
-
Yang, Z., Shipman, L., Zhang, M., Anton, B.P., Roberts, R.J. and Cheng, X. (2004) Structural characterization and comparative phylogenetic analysis of Escherichia coli HemK, a protein (N5)-glutamine methyltransferase. J. Mol. Biol., 340, 695-706. (Pubitemid 38829632)
-
(2004)
Journal of Molecular Biology
, vol.340
, Issue.4
, pp. 695-706
-
-
Yang, Z.1
Shipman, L.2
Zhang, M.3
Anton, B.P.4
Roberts, R.J.5
Cheng, X.6
-
45
-
-
27144474752
-
The Kluyveromyces lactis γ-toxin targets tRNA anticodons
-
DOI 10.1261/rna.2172105
-
Lu, J., Huang, B., Esberg, A., Johansson, M.J. and Bystrom, A.S. (2005) The Kluyveromyces lactis gamma-toxin targets tRNA anticodons. RNA, 11, 1648-1654. (Pubitemid 41505539)
-
(2005)
RNA
, vol.11
, Issue.11
, pp. 1648-1654
-
-
Lu, J.1
Huang, B.O.2
Esberg, A.3
Johansson, M.J.O.4
Bystrom, A.S.5
-
46
-
-
39149096592
-
The yeast ribosome synthesis factor Emg1 is a novel member of the superfamily of alpha/beta knot fold methyltransferases
-
DOI 10.1093/nar/gkm1074
-
Leulliot, N., Bohnsack, M.T., Graille, M., Tollervey, D. and Van Tilbeurgh, H. (2008) The yeast ribosome synthesis factor Emg1 is a novel member of the superfamily of alpha/beta knot fold methyltransferases. Nucleic Acids Res., 36, 629-639. (Pubitemid 351255435)
-
(2008)
Nucleic Acids Research
, vol.36
, Issue.2
, pp. 629-639
-
-
Leulliot, N.1
Bohnsack, M.T.2
Graille, M.3
Tollervey, D.4
Van Tilbeurgh, H.5
-
47
-
-
36549088581
-
Structural insights into the mechanism and evolution of the vaccinia virus mRNA cap N7 methyl-transferase
-
DOI 10.1038/sj.emboj.7601912, PII 7601912
-
De la Pena, M., Kyrieleis, O.J. and Cusack, S. (2007) Structural insights into the mechanism and evolution of the vaccinia virus mRNA cap N7 methyl-transferase. EMBO J., 26, 4913-4925. (Pubitemid 350191308)
-
(2007)
EMBO Journal
, vol.26
, Issue.23
, pp. 4913-4925
-
-
De La Pea, M.1
Kyrieleis, O.J.P.2
Cusack, S.3
-
48
-
-
65449127059
-
Structural insights into eRF3 and stop codon recognition by eRF1
-
Cheng, Z., Saito, K., Pisarev, A.V., Wada, M., Pisareva, V.P., Pestova, T.V., Gajda, M., Round, A., Kong, C., Lim, M. et al. (2009) Structural insights into eRF3 and stop codon recognition by eRF1. Genes Dev., 23, 1106-1118.
-
(2009)
Genes Dev.
, vol.23
, pp. 1106-1118
-
-
Cheng, Z.1
Saito, K.2
Pisarev, A.V.3
Wada, M.4
Pisareva, V.P.5
Pestova, T.V.6
Gajda, M.7
Round, A.8
Kong, C.9
Lim, M.10
-
49
-
-
78049291491
-
Structural basis for mRNA surveillance by archaeal Pelota and GTP-bound EF1{alpha} complex
-
Kobayashi, K., Kikuno, I., Kuroha, K., Saito, K., Ito, K., Ishitani, R., Inada, T. and Nureki, O. (2010) Structural basis for mRNA surveillance by archaeal Pelota and GTP-bound EF1{alpha} complex. Proc. Natl Acad. Sci. USA, 107, 17575-17579.
-
(2010)
Proc. Natl Acad. Sci. USA
, vol.107
, pp. 17575-17579
-
-
Kobayashi, K.1
Kikuno, I.2
Kuroha, K.3
Saito, K.4
Ito, K.5
Ishitani, R.6
Inada, T.7
Nureki, O.8
-
50
-
-
78649839805
-
Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways
-
van den Elzen, A.M., Henri, J., Lazar, N., Gas, M.E., Durand, D., Lacroute, F., Nicaise, M., van Tilbeurgh, H., Seraphin, B. and Graille, M. (2010) Dissection of Dom34-Hbs1 reveals independent functions in two RNA quality control pathways. Nat. Struct. Mol. Biol., 17, 1446-1452.
-
(2010)
Nat. Struct. Mol. Biol.
, vol.17
, pp. 1446-1452
-
-
Van Den Elzen, A.M.1
Henri, J.2
Lazar, N.3
Gas, M.E.4
Durand, D.5
Lacroute, F.6
Nicaise, M.7
Van Tilbeurgh, H.8
Seraphin, B.9
Graille, M.10
-
51
-
-
0037069328
-
Resistance to the macrolide antibiotic tylosin is conferred by single methylations at 23S rRNA nucleotides G748 and A2058 acting in synergy
-
DOI 10.1073/pnas.232580599
-
Liu, M. and Douthwaite, S. (2002) Resistance to the macrolide antibiotic tylosin is conferred by single methylations at 23S rRNA nucleotides G748 and A2058 acting in synergy. Proc. Natl Acad. Sci. USA, 99, 14658-14663. (Pubitemid 35334540)
-
(2002)
Proceedings of the National Academy of Sciences of the United States of America
, vol.99
, Issue.23
, pp. 14658-14663
-
-
Liu, M.1
Douthwaite, S.2
-
52
-
-
1642529580
-
I : Implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site
-
DOI 10.1073/pnas.0400189101
-
Das, K., Acton, T., Chiang, Y., Shih, L., Arnold, E. and Montelione, G.T. (2004) Crystal structure of RlmAI: implications for understanding the 23S rRNA G745/G748-methylation at the macrolide antibiotic-binding site. Proc. Natl Acad. Sci. USA, 101, 4041-4046. (Pubitemid 38405880)
-
(2004)
Proceedings of the National Academy of Sciences of the United States of America
, vol.101
, Issue.12
, pp. 4041-4046
-
-
Das, K.1
Acton, T.2
Chiang, Y.3
Shih, L.4
Arnold, E.5
Montelione, G.T.6
-
53
-
-
17844373810
-
7 G methyltransferase Trm8p/Trm82p: Evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p
-
DOI 10.1261/rna.2030705
-
Alexandrov, A., Grayhack, E.J. and Phizicky, E.M. (2005) tRNA m7G methyltransferase Trm8p/Trm82p: evidence linking activity to a growth phenotype and implicating Trm82p in maintaining levels of active Trm8p. RNA, 11, 821-830. (Pubitemid 40594346)
-
(2005)
RNA
, vol.11
, Issue.5
, pp. 821-830
-
-
Alexandrov, A.1
Grayhack, E.J.2
Phizicky, E.M.3
-
54
-
-
0034625166
-
The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1- methyladenosine) methyltransferase of Saccharomyces cerevisiae
-
DOI 10.1073/pnas.090102597
-
Anderson, J., Phan, L. and Hinnebusch, A.G. (2000) The Gcd10p/Gcd14p complex is the essential two-subunit tRNA(1-methyladenosine) methyltransferase of Saccharomyces cerevisiae. Proc. Natl Acad. Sci. USA, 97, 5173-5178. (Pubitemid 30313691)
-
(2000)
Proceedings of the National Academy of Sciences of the United States of America
, vol.97
, Issue.10
, pp. 5173-5178
-
-
Anderson, J.1
Phan, L.2
Hinnebusch, A.G.3
-
55
-
-
0028088458
-
Intrinsic RNA (guanine-7) methyltransferase activity of the vaccinia virus capping enzyme D1 subunit is stimulated by the D12 subunit. Identification of amino acid residues in the D1 protein required for subunit association and methyl group transfer
-
Mao, X. and Shuman, S. (1994) Intrinsic RNA (guanine-7) methyltransferase activity of the vaccinia virus capping enzyme D1 subunit is stimulated by the D12 subunit. Identification of amino acid residues in the D1 protein required for subunit association and methyl group transfer. J. Biol. Chem., 269, 24472-24479.
-
(1994)
J. Biol. Chem.
, vol.269
, pp. 24472-24479
-
-
Mao, X.1
Shuman, S.2
-
56
-
-
36749070892
-
1 A58 Mtase from Saccharomyces cerevisiae contribute to tRNA binding
-
DOI 10.1093/nar/gkm574
-
Ozanick, S.G., Bujnicki, J.M., Sem, D.S. and Anderson, J.T. (2007) Conserved amino acids in each subunit of the heteroligomeric tRNA m1A58 Mtase from Saccharomyces cerevisiae contribute to tRNA binding. Nucleic Acids Res., 35, 6808-6819. (Pubitemid 350201801)
-
(2007)
Nucleic Acids Research
, vol.35
, Issue.20
, pp. 6808-6819
-
-
Ozanick, S.G.1
Bujnicki, J.M.2
Sem, D.S.3
Anderson, J.T.4
-
57
-
-
33745868309
-
Poxvirus mRNA cap methyltransferase: Bypass of the requirement for the stimulatory subunit by mutations in the catalytic subunit and evidence for intersubunit allostery
-
DOI 10.1074/jbc.M602867200
-
Schwer, B., Hausmann, S., Schneider, S. and Shuman, S. (2006) Poxvirus mRNA cap methyltransferase. Bypass of the requirement for the stimulatory subunit by mutations in the catalytic subunit and evidence for intersubunit allostery. J. Biol. Chem., 281, 18953-18960. (Pubitemid 44035398)
-
(2006)
Journal of Biological Chemistry
, vol.281
, Issue.28
, pp. 18953-18960
-
-
Schwer, B.1
Hausmann, S.2
Schneider, S.3
Shuman, S.4
-
58
-
-
0036795285
-
Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA
-
Alexandrov, A., Martzen, M.R. and Phizicky, E.M. (2002) Two proteins that form a complex are required for 7-methylguanosine modification of yeast tRNA. RNA, 8, 1253-1266.
-
(2002)
RNA
, vol.8
, pp. 1253-1266
-
-
Alexandrov, A.1
Martzen, M.R.2
Phizicky, E.M.3
-
59
-
-
37549067728
-
Structure of the yeast tRNA m7G methylation complex
-
Leulliot, N., Chaillet, M., Durand, D., Ulryck, N., Blondeau, K. and van Tilbeurgh, H. (2008) Structure of the yeast tRNA m7G methylation complex. Structure, 16, 52-61.
-
(2008)
Structure
, vol.16
, pp. 52-61
-
-
Leulliot, N.1
Chaillet, M.2
Durand, D.3
Ulryck, N.4
Blondeau, K.5
Van Tilbeurgh, H.6
-
60
-
-
77957281190
-
Structural and functional insights into Saccharomyces cerevisiae Tpa1, a putative prolylhydroxylase influencing translation termination and transcription
-
Henri, J., Rispal, D., Bayart, E., van Tilbeurgh, H., Seraphin, B. and Graille, M. (2010) Structural and functional insights into Saccharomyces cerevisiae Tpa1, a putative prolylhydroxylase influencing translation termination and transcription. J. Biol. Chem., 285, 30767-30778.
-
(2010)
J. Biol. Chem.
, vol.285
, pp. 30767-30778
-
-
Henri, J.1
Rispal, D.2
Bayart, E.3
Van Tilbeurgh, H.4
Seraphin, B.5
Graille, M.6
-
61
-
-
77956553901
-
Decoding accuracy in eRF1 mutants and its correlation with pleiotropic quantitative traits in yeast
-
Merritt, G.H., Naemi, W.R., Mugnier, P., Webb, H.M., Tuite, M.F. and von der Haar, T. (2010) Decoding accuracy in eRF1 mutants and its correlation with pleiotropic quantitative traits in yeast. Nucleic Acids Res., 38, 5479-5492.
-
(2010)
Nucleic Acids Res.
, vol.38
, pp. 5479-5492
-
-
Merritt, G.H.1
Naemi, W.R.2
Mugnier, P.3
Webb, H.M.4
Tuite, M.F.5
Von Der Haar, T.6
-
62
-
-
22544436364
-
+ ] and nonstop mRNA decay affect phenotypic variation
-
DOI 10.1073/pnas.0504557102
-
Wilson, M.A., Meaux, S., Parker, R. and van Hoof, A. (2005) Genetic interactions between [PSI+] and nonstop mRNA decay affect phenotypic variation. Proc. Natl Acad. Sci. USA, 102, 10244-10249. (Pubitemid 41023357)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.29
, pp. 10244-10249
-
-
Wilson, M.A.1
Meaux, S.2
Parker, R.3
Van Hoof, A.4
|