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Volumn 30, Issue 10, 2010, Pages 2449-2459

Human AlkB homolog ABH8 is a tRNA methyltransferase required for wobble uridine modification and DNA damage survival

Author keywords

[No Author keywords available]

Indexed keywords

5 METHYLCARBOXYMETHYLURIDINE; ALKYLATED DNA REPAIR PROTEIN ALKB HOMOLOG 8; BLEOMYCIN; DNA; LENTIVIRUS VECTOR; MESSENGER RNA; SHORT HAIRPIN RNA; TRANSFER RNA; TRANSFER RNA METHYLTRANSFERASE; UNCLASSIFIED DRUG; URIDINE; URIDINE DERIVATIVE;

EID: 77951981033     PISSN: 02707306     EISSN: None     Source Type: Journal    
DOI: 10.1128/MCB.01604-09     Document Type: Article
Times cited : (167)

References (46)
  • 2
    • 33846269602 scopus 로고    scopus 로고
    • tRNA's wobble decoding of the genome: 40 years of modification
    • Agris, P. F., F. A. Vendeix, and W. D. Graham. 2007. tRNA's wobble decoding of the genome: 40 years of modification. J. Mol. Biol. 366:1-13.
    • (2007) J. Mol. Biol. , vol.366 , pp. 1-13
    • Agris, P.F.1    Vendeix, F.A.2    Graham, W.D.3
  • 3
    • 0035221419 scopus 로고    scopus 로고
    • The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases
    • RESEARCH0007
    • Aravind, L., and E. V. Koonin. 2001. The DNA-repair protein AlkB, EGL-9, and leprecan define new families of 2-oxoglutarate- and iron-dependent dioxygenases. Genome Biol. 2:RESEARCH0007.
    • (2001) Genome Biol. , vol.2
    • Aravind, L.1    Koonin, E.V.2
  • 4
    • 39149100653 scopus 로고    scopus 로고
    • DNA protein kinase-dependent G2 checkpoint revealed following knockdown of ataxia-telangiectasia mutated in human mammary epithelial cells
    • Arlander, S. J., B. T. Greene, C. L. Innes, and R. S. Paules. 2008. DNA protein kinase-dependent G2 checkpoint revealed following knockdown of ataxia-telangiectasia mutated in human mammary epithelial cells. Cancer Res. 68:89-97.
    • (2008) Cancer Res. , vol.68 , pp. 89-97
    • Arlander, S.J.1    Greene, B.T.2    Innes, C.L.3    Paules, R.S.4
  • 5
    • 0036923370 scopus 로고    scopus 로고
    • Damage recovery pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping
    • Begley, T. J., A. S. Rosenbach, T. Ideker, and L. D. Samson. 2002. Damage recovery pathways in Saccharomyces cerevisiae revealed by genomic phenotyping and interactome mapping. Mol. Cancer Res. 1:103-112.
    • (2002) Mol. Cancer Res. , vol.1 , pp. 103-112
    • Begley, T.J.1    Rosenbach, A.S.2    Ideker, T.3    Samson, L.D.4
  • 6
    • 4944238229 scopus 로고    scopus 로고
    • Hot spots for modulating toxicity identified by genomic phenotyping and localization mapping
    • Begley, T. J., A. S. Rosenbach, T. Ideker, and L. D. Samson. 2004. Hot spots for modulating toxicity identified by genomic phenotyping and localization mapping. Mol. Cell 16:117-125.
    • (2004) Mol. Cell , vol.16 , pp. 117-125
    • Begley, T.J.1    Rosenbach, A.S.2    Ideker, T.3    Samson, L.D.4
  • 9
    • 67649229560 scopus 로고    scopus 로고
    • Activities of the chaperonin containing TCP-1 (CCT): Implications for cell cycle progression and cytoskeletal organisation
    • Brackley, K. I., and J. Grantham. 2009. Activities of the chaperonin containing TCP-1 (CCT): implications for cell cycle progression and cytoskeletal organisation. Cell Stress Chaperones 14:23-31.
    • (2009) Cell Stress Chaperones , vol.14 , pp. 23-31
    • Brackley, K.I.1    Grantham, J.2
  • 11
    • 34548733710 scopus 로고    scopus 로고
    • Identification of genes encoding tRNA modification enzymes by comparative genomics
    • de Crecy-Lagard, V. 2007. Identification of genes encoding tRNA modification enzymes by comparative genomics. Methods Enzymol. 425:153-183.
    • (2007) Methods Enzymol. , vol.425 , pp. 153-183
    • De Crecy-Lagard, V.1
  • 14
    • 0037068433 scopus 로고    scopus 로고
    • AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli
    • DOI 10.1038/nature01048
    • Falnes, P. O., R. F. Johansen, and E. Seeberg. 2002. AlkB-mediated oxidative demethylation reverses DNA damage in Escherichia coli. Nature 419:178-182. (Pubitemid 35025447)
    • (2002) Nature , vol.419 , Issue.6903 , pp. 178-182
    • Falnes, P.O.1    Johansen, R.F.2    Seeberg, E.3
  • 15
    • 45549090288 scopus 로고    scopus 로고
    • HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1
    • Figaro, S., N. Scrima, R. H. Buckingham, and V. Heurgue-Hamard. 2008. HemK2 protein, encoded on human chromosome 21, methylates translation termination factor eRF1. FEBS Lett. 582:2352-2356.
    • (2008) FEBS Lett. , vol.582 , pp. 2352-2356
    • Figaro, S.1    Scrima, N.2    Buckingham, R.H.3    Heurgue-Hamard, V.4
  • 16
    • 33646552414 scopus 로고    scopus 로고
    • The RNA methyltransferase Misu (NSun2) mediates Myc-induced proliferation and is upregulated in tumors
    • Frye, M., and F. M. Watt. 2006. The RNA methyltransferase Misu (NSun2) mediates Myc-induced proliferation and is upregulated in tumors. Curr. Biol. 16:971-981.
    • (2006) Curr. Biol. , vol.16 , pp. 971-981
    • Frye, M.1    Watt, F.M.2
  • 17
    • 33644775758 scopus 로고    scopus 로고
    • Human telomerase and Cajal body ribonucleoproteins share a unique specificity of Sm protein association
    • DOI 10.1101/gad.1390306
    • Fu, D., and K. Collins. 2006. Human telomerase and Cajal body ribonucleoproteins share a unique specificity of Sm protein association. Genes Dev. 20:531-536. (Pubitemid 43345319)
    • (2006) Genes and Development , vol.20 , Issue.5 , pp. 531-536
    • Fu, D.1    Collins, K.2
  • 23
    • 0036094506 scopus 로고    scopus 로고
    • How selenium has altered our understanding of the genetic code
    • Hatfield, D. L., and V. N. Gladyshev. 2002. How selenium has altered our understanding of the genetic code. Mol. Cell. Biol. 22:3565-3576.
    • (2002) Mol. Cell. Biol. , vol.22 , pp. 3565-3576
    • Hatfield, D.L.1    Gladyshev, V.N.2
  • 25
    • 34547758450 scopus 로고    scopus 로고
    • Cysteine dioxygenase: Structure and mechanism
    • Cambridge
    • Joseph, C. A., and M. J. Maroney. 2007. Cysteine dioxygenase: structure and mechanism. Chem. Commun. (Cambridge) 2007:3338-3349.
    • (2007) Chem. Commun. , vol.2007 , pp. 3338-3349
    • Joseph, C.A.1    Maroney, M.J.2
  • 26
    • 0345060040 scopus 로고    scopus 로고
    • Novel methyltransferase for modified uridine residues at the wobble position of tRNA
    • Kalhor, H. R., and S. Clarke. 2003. Novel methyltransferase for modified uridine residues at the wobble position of tRNA. Mol. Cell. Biol. 23:9283-9292.
    • (2003) Mol. Cell. Biol. , vol.23 , pp. 9283-9292
    • Kalhor, H.R.1    Clarke, S.2
  • 27
    • 0020536360 scopus 로고
    • A new gene (alkB) of Escherichia coli that controls sensitivity to methyl methane sulfonate
    • Kataoka, H., Y. Yamamoto, and M. Sekiguchi. 1983. A new gene (alkB) of Escherichia coli that controls sensitivity to methyl methane sulfonate. J. Bacteriol. 153:1301-1307. (Pubitemid 13126612)
    • (1983) Journal of Bacteriology , vol.153 , Issue.3 , pp. 1301-1307
    • Kataoka, H.1    Yamamoto, Y.2    Sekiguchi, M.3
  • 28
    • 9444278376 scopus 로고    scopus 로고
    • Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB
    • Kurowski, M. A., A. S. Bhagwat, G. Papaj, and J. M. Bujnicki. 2003. Phylogenomic identification of five new human homologs of the DNA repair enzyme AlkB. BMC Genomics 4:48.
    • (2003) BMC Genomics , vol.4 , pp. 48
    • Kurowski, M.A.1    Bhagwat, A.S.2    Papaj, G.3    Bujnicki, J.M.4
  • 30
    • 0036828724 scopus 로고    scopus 로고
    • Probability-based validation of protein identifications using a modified SEQUEST algorithm
    • MacCoss, M. J., C. C. Wu, and J. R. Yates III. 2002. Probability-based validation of protein identifications using a modified SEQUEST algorithm. Anal. Chem. 74:5593-5599.
    • (2002) Anal. Chem. , vol.74 , pp. 5593-5599
    • MacCoss, M.J.1    Wu, C.C.2    Yates III, J.R.3
  • 32
    • 0029059542 scopus 로고
    • Nitrogen mustard inhibits transcription and translation in a cell free system
    • Masta, A., P. J. Gray, and D. R. Phillips. 1995. Nitrogen mustard inhibits transcription and translation in a cell free system. Nucleic Acids Res. 23:3508-3515.
    • (1995) Nucleic Acids Res. , vol.23 , pp. 3508-3515
    • Masta, A.1    Gray, P.J.2    Phillips, D.R.3
  • 33
    • 0025352187 scopus 로고
    • Advanced mammalian gene transfer: High titre retroviral vectors with multiple drug selection markers and a complementary helper-free packaging cell line
    • Morgenstern, J. P., and H. Land. 1990. Advanced mammalian gene transfer: high titre retroviral vectors with multiple drug selection markers and a complementary helper-free packaging cell line. Nucleic Acids Res. 18:3587-3596. (Pubitemid 20191808)
    • (1990) Nucleic Acids Research , vol.18 , Issue.12 , pp. 3587-3596
    • Morgenstern, J.P.1    Land, H.2
  • 34
    • 4944254870 scopus 로고    scopus 로고
    • AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation
    • DOI 10.1016/j.molcel.2004.09.002, PII S1097276504005209
    • Ougland, R., C. M. Zhang, A. Liiv, R. F. Johansen, E. Seeberg, Y. M. Hou, J. Remme, and P. O. Falnes. 2004. AlkB restores the biological function of mRNA and tRNA inactivated by chemical methylation. Mol. Cell 16:107-116. (Pubitemid 39330156)
    • (2004) Molecular Cell , vol.16 , Issue.1 , pp. 107-116
    • Ougland, R.1    Zhang, C.-M.2    Liiv, A.3    Johansen, R.F.4    Seeberg, E.5    Hou, Y.-M.6    Remme, J.7    Falnes, P.O.8
  • 35
    • 33847050240 scopus 로고    scopus 로고
    • Non-heme dioxygenases: Cellular sensors and regulators jelly rolled into one?
    • Ozer, A., and R. K. Bruick. 2007. Non-heme dioxygenases: cellular sensors and regulators jelly rolled into one? Nat. Chem. Biol. 3:144-153.
    • (2007) Nat. Chem. Biol. , vol.3 , pp. 144-153
    • Ozer, A.1    Bruick, R.K.2
  • 36
    • 28544446417 scopus 로고    scopus 로고
    • Sensitization of human carcinoma cells to alkylating agents by small interfering RNA suppression of 3-alkyladenine-DNA glycosylase
    • DOI 10.1158/0008-5472.CAN-05-1495
    • Paik, J., T. Duncan, T. Lindahl, and B. Sedgwick. 2005. Sensitization of human carcinoma cells to alkylating agents by small interfering RNA suppression of 3-alkyladenine-DNA glycosylase. Cancer Res. 65:10472-10477. (Pubitemid 41743742)
    • (2005) Cancer Research , vol.65 , Issue.22 , pp. 10472-10477
    • Paik, J.1    Duncan, T.2    Lindahl, T.3    Sedgwick, B.4
  • 38
    • 18944364447 scopus 로고    scopus 로고
    • Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA
    • Purushothaman, S. K., J. M. Bujnicki, H. Grosjean, and B. Lapeyre. 2005. Trm11p and Trm112p are both required for the formation of 2-methylguanosine at position 10 in yeast tRNA. Mol. Cell. Biol. 25:4359-4370.
    • (2005) Mol. Cell. Biol. , vol.25 , pp. 4359-4370
    • Purushothaman, S.K.1    Bujnicki, J.M.2    Grosjean, H.3    Lapeyre, B.4
  • 40
    • 57449121400 scopus 로고    scopus 로고
    • A functional proteomics approach links the ubiquitin-related modifier Urm1 to a tRNA modification pathway
    • Schlieker, C. D., A. G. Van der Veen, J. R. Damon, E. Spooner, and H. L. Ploegh. 2008. A functional proteomics approach links the ubiquitin-related modifier Urm1 to a tRNA modification pathway. Proc. Natl. Acad. Sci. U. S. A. 105:18255-18260.
    • (2008) Proc. Natl. Acad. Sci. U. S. A. , vol.105 , pp. 18255-18260
    • Schlieker, C.D.1    Van Der Veen, A.G.2    Damon, J.R.3    Spooner, E.4    Ploegh, H.L.5
  • 41
    • 33847688859 scopus 로고    scopus 로고
    • Repair of alkylated DNA: Recent advances
    • DOI 10.1016/j.dnarep.2006.10.005, PII S1568786406003156, Repair of small base lesions in DNA-from molecular biology to phenotype
    • Sedgwick, B., P. A. Bates, J. Paik, S. C. Jacobs, and T. Lindahl. 2007. Repair of alkylated DNA: recent advances. DNA Repair (Amsterdam) 6:429-442. (Pubitemid 46357047)
    • (2007) DNA Repair , vol.6 , Issue.4 , pp. 429-442
    • Sedgwick, B.1    Bates, P.A.2    Paik, J.3    Jacobs, S.C.4    Lindahl, T.5
  • 43
    • 13444288185 scopus 로고    scopus 로고
    • Compilation of tRNA sequences and sequences of tRNA genes
    • Sprinzl, M., and K. S. Vassilenko. 2005. Compilation of tRNA sequences and sequences of tRNA genes. Nucleic Acids Res. 33:D139-D140.
    • (2005) Nucleic Acids Res. , vol.33
    • Sprinzl, M.1    Vassilenko, K.S.2
  • 45
    • 0037068446 scopus 로고    scopus 로고
    • Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage
    • DOI 10.1038/nature00908
    • Trewick, S. C., T. F. Henshaw, R. P. Hausinger, T. Lindahl, and B. Sedgwick. 2002. Oxidative demethylation by Escherichia coli AlkB directly reverts DNA base damage. Nature 419:174-178. (Pubitemid 35025446)
    • (2002) Nature , vol.419 , Issue.6903 , pp. 174-178
    • Trewick, S.C.1    Henshaw, T.F.2    Hausinger, R.P.3    Lindahl, T.4    Sedgwick, B.5


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