Transcriptional control mechanisms of genes of lipid and fatty acid metabolism in the Atlantic salmon (Salmo salar L.) established cell line, SHK-1

Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids

Volumn 1811, Issue 3, 2011, Pages 194-202

  Minghetti, Matteo ^a   Leaver, Michael J ^a   Tocher, Douglas R ^a  

^a UNIVERSITY OF STIRLING   (United Kingdom)

Author keywords

Cell culture; Fatty acid; Gene expression; Lipid; Nuclear receptor; Transcription factor

Indexed keywords

CHOLESTEROL; FATTY ACID; FATTY ACID SYNTHASE; HYDROXYMETHYLGLUTARYL COENZYME A REDUCTASE; LIPID; LIVER X RECEPTOR; MESSENGER RNA; POLYUNSATURATED FATTY ACID; STEROL REGULATORY ELEMENT BINDING PROTEIN; STEROL REGULATORY ELEMENT BINDING PROTEIN 1; STEROL REGULATORY ELEMENT BINDING PROTEIN 2;

ANIMAL CELL; ANIMAL TISSUE; ARTICLE; ATLANTIC SALMON; FATTY ACID METABOLISM; GENE CONTROL; GENE EXPRESSION; GENE TARGETING; GENETIC TRANSCRIPTION; LIPID METABOLISM; LIPOGENESIS; NONHUMAN; NUCLEOTIDE SEQUENCE; PRIORITY JOURNAL; PROTEIN EXPRESSION; REGULATORY MECHANISM; TISSUE DISTRIBUTION;

ANIMALS; CELL LINE; FATTY ACIDS; FISH PROTEINS; GENE EXPRESSION REGULATION, ENZYMOLOGIC; LIPID METABOLISM; SALMO SALAR; STEROL REGULATORY ELEMENT BINDING PROTEIN 1; STEROL REGULATORY ELEMENT BINDING PROTEIN 2; TRANSCRIPTION, GENETIC;

MAMMALIA; SALMO SALAR;

EID: 78751648416     PISSN: 13881981     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.bbalip.2010.12.008     Document Type: Article

References (51)

1. D.I. Givens, and R.A. Gibbs Very long chain n-3 polyunsaturated fatty acids in the food chain in the UK and the potential of animal-derived foods to increase intake Br Nutr Found Bull 31 2006 104 110
2. A. Eilander, D.C. Hundscheid, S.J. Osendarp, C. Trander, and P.L. Zock Effects of n-3 long chain polyunsaturated fatty acid supplementation on visual and cognitive development throughout childhood: A review of human studies Prostaglandins Leukot Essent Fatty Acids 76 2007 189 203
3. C.H.S. Ruxton, S.C. Reed, M.J.A. Simpson, and K.J. Millington The health benefits of omega-3 polyunsaturated fatty acids: a review of the evidence J Hum Nutr Dietet 20 2007 275 285
4. P.C. Calder n-3 polyunsaturated fatty acids, inflammation, and inflammatory diseases Am J Clin Nutr 83 2006 1505S 1519S
5. J. Vaya, and H.M. Schipper Oxysterols, cholesterol homeostasis, and Alzheimer disease J Neurochem 102 2007 1727 1737
6. J.D. Horton, J.L. Goldstein, and M.S. Brown SREBPs: activators of the complete program of cholesterol and fatty acid synthesis in the liver J Clin Invest 109 2002 1125 1131
7. J.D. Horton, N.A. Shah, J.A. Warrington, N.N. Anderson, S.W. Park, M.S. Brown, and J.L. Goldstein Combined analysis of oligonucleotide microarray data from transgenic and knockout mice identifies direct SREBP target genes Proc Natl Acad Sci USA 100 2003 12027 12032
8. H.W. Cook, and R.C.R. McMaster Fatty acid desaturation and chain elongation in eukaryotes D.E. Vance, J.E. Vance, Biochemistry of Lipids, Lipoproteins and Membranes fourth ed. 2004 Elsevier Amsterdam 181 204
9. G. Howell, X. Deng, C. Yellaturu, E.A. Park, H.G. Wilcox, R. Raghow, and M.B. Elam N-3 polyunsaturated fatty acids suppress insulin-induced SREBP-1c transcription via reduced trans-activating capacity of LXRα Biochim Biophys Acta 1791 2009 1190 1196
10. M.J. Leaver, J.M. Bautista, T. Björnsson, E. Jönsson, G. Krey, D.R. Tocher, and B.E. Torstensen Towards fish lipid nutrigenomics: current state and prospects for fin-fish aquaculture Rev Fish Sci 16 2008 71 92
11. L. Cruz Garcia, M. Minghetti, I. Navarro, and D.R. Tocher Molecular cloning, tissue expression and regulation of Liver X Receptor (LXR) transcription factors of Atlantic salmon (Salmo salar) and rainbow trout (Oncorhynchus mykiss) Comp Biochem Physiol 153B 2009 81 88
12. N. Hastings, M.K. Agaba, D.R. Tocher, X. Zheng, C.A. Dickson, J.R. Dick, and A.J. Teale Molecular cloning and functional characterization of fatty acyl desaturase and elongase cDNAs involved in the production of eicosapentaenoic and docosahexaenoic acids from α-linolenic acid in Atlantic salmon (Salmo salar) Mar Biotechnol 6 2005 463 474
13. X. Zheng, D.R. Tocher, C.A. Dickson, J.R. Dick, J.G. Bell, and A.J. Teale Highly unsaturated fatty acid synthesis in vertebrates: new insights with the cloning and characterisation of a Δ6 desaturase of Atlantic salmon Lipids 40 2005 13 24
14. Ó. Monroig, X. Zheng, S. Morais, M.J. Leaver, J.B. Taggart, and D.R. Tocher Multiple fatty acyl desaturase (FAD) genes in Atlantic salmon: cloning and functional expression of cDNAs confirm presence of three Δ6 FADs Biochim Biophys Acta 1801 2010 1072 1081
15. S. Morais, Ó. Monroig, X. Zheng, M.J. Leaver, and D.R. Tocher Highly unsaturated fatty acid synthesis in Atlantic salmon: characterization of Elovl5- and Elovl2-like elongases Mar Biotechnol 11 2009 627 639
16. M.J. Leaver, L.A.N. Villeneuve, A. Obach, L. Jensen, J.E. Bron, D.R. Tocher, and J.B. Taggart Functional genomics reveals increases in cholesterol biosynthetic genes and highly unsaturated fatty acid biosynthesis after dietary substitution of fish oil with vegetable oils in Atlantic salmon (Salmo salar) BMC Genomics 9 2008 299 10.1186/1471-2164-9-299
17. J.B. Taggart, J.E. Bron, S.A.M. Martin, P.J. Seear, B. Hoyheim, R. Talbot, L. Villeneuve, G.E. Sweeney, D.F. Houlihan, C.J. Secombes, D.R. Tocher, and A.J. Teale A description of the origins, designs and performance of the TRAITS/SGP Atlantic salmon (Salmo salar L.) cDNA microarray J Fish Biol 72 2008 2071 2094
18. X. Zheng, M.J. Leaver, and D.R. Tocher Long-chain polyunsaturated fatty acid synthesis in fish: comparative analysis of Atlantic salmon (Salmo salar L.) and Atlantic cod (Gadus morhua L.) Δ6 fatty acyl desaturase gene promoters Comp Biochem Physiol 154B 2009 255 263
19. B. Worms, E.B. Barbier, N. Beaumont, J.E. Duffy, C. Folke, B.S. Halpern, J.B.C. Jackson, H.K. Lotze, F. Micheli, S.R. Palumbi, E. Sala, K.A. Selkoe, J.J. Stachowicz, and R. Watson Impacts of biodiversity loss on ocean ecosystem services Science 314 2006 787 790
20. Food And Agricultural Organisation of the United Nations (FAO), The state of world fisheries and aquaculture 2008 (SOFIA). FAO Fisheries and Aquaculture Department, Rome, 2009, 176 pp.
21. A.G.J. Tacon, and M. Metian Global overview on the use of fish meal and fish oil in industrially compounded aquafeeds: Trends and future prospects Aquaculture 285 2008 146 158
22. G.C. Burdge, and P. Calder Conversion of alpha-linolenic acid to longer chain polyunsaturated fatty acids in human adults Reprod Nutr Dev 45 2005 581 597
23. D.R. Tocher Fatty acid requirements in ontogeny of marine and freshwater fish Aquacult Res 41 2010 717 732
24. J.G. Bell Current aspects of lipid nutrition in fish farming K.D. Black, A.D. Pickering, Biology of Farmed Fish 1998 Sheffield Academic Sheffield 114 145
25. D.R. Tocher Metabolism and functions of lipids and fatty acids in teleost fish Rev Fish Sci 11 2003 107 184
26. X. Zheng, B.E. Torstensen, D.R. Tocher, J.R. Dick, R.J. Henderson, and J.G. Bell Environmental and dietary influences on highly unsaturated fatty acid biosynthesis and expression of fatty acyl desaturases and elongase genes in liver of Atlantic salmon (Salmo salar) Biochim Biophys Acta 1734 2005 13 24
27. National Research Council (NRC Nutrient requirements of fish 1993 National Academic Press Washington, DC
28. B.H. Dannevig, B.E. Brudeseth, T. Gjoen, M. Rode, H.I. Wergeland, O. Evensen, and C.M. Press Characterisation of a long-term cell line (SHK-1) developed from the head kidney of Atlantic salmon (Salmo salar L) Fish Shellfish Immunol 7 1997 213 226
29. B. Collet, and C. Collins Comparative gene expression profile in two Atlantic salmon cell lines TO and SHK-1 Vet Immunol Immunopath 130 2009 92 95
30. J.D. Thompson, F. Plewniak, J.C. Thierry, and O. Poch DbClustal: rapid and reliable global multiple alignments of protein sequences detected by database searches Nucleic Acids Res 28 2000 2919 2926
31. N. Saitou, and M. Nei The neighbor-joining method. A new method for reconstructing phylogenetic trees Mol Biol Evol 4 1987 406 425
32. K. Tamura, J. Dudley, M. Nei, and S. Kumar S. MEGA4: Molecular Evolutionary Genetics Analysis (MEGA) Software Version 4.0 Mol Biol Evol 24 2007 1596 1599
33. J. Vandesompele, K. De Preter, F. Pattyn, B. Poppe, N. Van Roy, A. De Paepe, and F. Speleman Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes Genome Biol 3 2002 RESEARCH0034
34. J.H. Zar Biostatistical Analysis 1999 Prentice Hall International New Jersey
35. R.B. Rawson The SREBP pathway - insights from Insigs and insects Nat Rev Mol Cell Biol 4 2003 631 640
36. T.F. Osborne, and P.J. Espenshade Evolutionary conservation and adaptation in the mechanism that regulates SREBP action: what a long, strange tRIP it's been Genes Develop 23 2009 2578 2591
37. I. Shimomura, H. Shimano, J.D. Horton, J.L. Goldstein, and M.S. Brown Differential expression of exons 1a and 1c in mRNAs for sterol regulatory element binding protein-1 in human and mouse organs and cultured cells J Clin Invest 99 1977 838 845
38. M.T. Bengoechea-Alonso, and J. Ericsson SREBP in signal transduction: cholesterol metabolism and beyond Curr Opin Cell Biol 19 2007 215 222
39. J.G. Pastorino, and N. Shulga Tumor necrosis factor-α can provoke cleavage and activation of sterol regulatory element-binding protein in ethanol-exposed cells via a caspase-dependent pathway that is cholesterol insensitive J Biol Chem 283 2008 25638 25649
40. A. Castrillo, and P. Tontonoz Nuclear receptors in macrophage biology: at the crossroads of lipid metabolism and inflammation Annu Rev Cell Dev Biol 20 2004 455 480
41. A. Caimari, P. Oliver, W. Rodenburg, J. Keijer, and A. Palou Feeding conditions control the expression of genes involved in sterol metabolism in peripheral blood mononuclear cells of normoweight and diet-induced (cafeteria) obese rats J Nutr Biochem 21 2010 1127 1133
42. T.H. Hu, P. Foxworthy, A. Siesky, J.V. Ficorilli, H. Gao, S.Y. Li, M. Christe, T. Ryan, G.Q. Cao, P. Eacho, M.D. Michael, and L.F. Michael Hepatic peroxisomal fatty acid β-oxidation is regulated by liver X receptor α Endocrinol 146 2005 5380 5387
43. Y. Qin, K.T. Dalen, J.A. Gustafsson, and H.I. Nebb Regulation of hepatic fatty acid elongase 5 by LXRα-SREBP-1c Biochim Biophys Acta 1791 2009 140 147
44. Y. Wang, P.M. Rogers, C. Su, G. Varga, K.R. Stayrook, and T.P. Burris Regulation of cholesterologenesis by the oxysterol receptor, LXRα J Biol Chem 283 2008 26332 26339
45. H.P. Cho, M. Nakamura, and S.D. Clarke Cloning, expression, and nutritional regulation of the mammalian Δ-6 desaturase J Biol Chem 274 1999 471 477
46. H.P. Cho, M. Nakamura, and S.D. Clarke Cloning, expression, and fatty acid regulation of the human Δ-5 desaturase J Biol Chem 274 1999 37335 37339
47. T.Y. Nara, W.S. He, C.G. Tang, S.D. Clarke, and M.T. Nakamura The E-box like sterol regulatory element mediates the suppression of human Δ-6 desaturase gene by highly unsaturated fatty acids Biochem Biophys Res Commun 296 2002 111 117
48. S.B. Joseph, B.A. Laffitte, P.H. Patel, M.A. Watson, K.E. Matsukuma, R. Walczak, J.L. Collins, T.F. Osborne, and P. Tontonoz Direct and indirect mechanisms for regulation of fatty acid synthase gene expression by liver X receptors J Biol Chem 277 2002 11019 11025
49. J.M. Lehmann, S.A. Kliewer, L.B. Moore, T.A. Smith Oliver, B.B. Oliver, J.L. Su, S.S. Sundseth, D.A. Winegar, D.E. Blanchard, T.A. Spencer, and T.M. Willson Activation of the nuclear receptor LXR by oxysterols defines a new hormone response pathway J Biol Chem 272 1997 3137 3140
50. J.J. Repa, G.S. Liang, J.F. Ou, J.F. Bashmakov, J.M.A. Lobaccaro, I. Shimomura, B. Shan, M.S. Brown, J.L. Goldstein, and D.J. Mangelsdorf Regulation of mouse sterol regulatory element-binding protein-1c gene (SREBP-1c) by oxysterol receptors, LXR α and LXR β Genes Develop 14 2000 2819 2830
51. N. Zelcer, and P. Tontonoz Liver X receptors as integrators of metabolic and inflammatory signalling J Clin Invest 116 2006 607 614