-
1
-
-
0033519723
-
Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase
-
Kohen A, Cannio R, Bartolucci S, Klinman JP (1999) Enzyme dynamics and hydrogen tunnelling in a thermophilic alcohol dehydrogenase. Nature 399: 496-499.
-
(1999)
Nature
, vol.399
, pp. 496-499
-
-
Kohen, A.1
Cannio, R.2
Bartolucci, S.3
Klinman, J.P.4
-
2
-
-
27544462342
-
Role of protein dynamics in reaction rate enhancement by enzymes
-
Agarwal PK (2005) Role of protein dynamics in reaction rate enhancement by enzymes. J Am Chem Soc 127: 15248-15256.
-
(2005)
J Am Chem Soc
, vol.127
, pp. 15248-15256
-
-
Agarwal, P.K.1
-
3
-
-
27744499156
-
Intrinsic dynamics of an enzyme underlies catalysis
-
Eisenmesser EZ, Millet O, Labeikovsky W, Korzhnev DM, Wolf-Watz M, et al. (2005) Intrinsic dynamics of an enzyme underlies catalysis. Nature 438: 117-121.
-
(2005)
Nature
, vol.438
, pp. 117-121
-
-
Eisenmesser, E.Z.1
Millet, O.2
Labeikovsky, W.3
Korzhnev, D.M.4
Wolf-Watz, M.5
-
4
-
-
33645801770
-
Atomic description of an enzyme reaction dominated by proton tunneling
-
Masgrau L, Roujeinikova A, Johannissen LO, Hothi P, Basran J, et al. (2006) Atomic description of an enzyme reaction dominated by proton tunneling. Science 312: 237-241.
-
(2006)
Science
, vol.312
, pp. 237-241
-
-
Masgrau, L.1
Roujeinikova, A.2
Johannissen, L.O.3
Hothi, P.4
Basran, J.5
-
5
-
-
33750441144
-
Coordinated effects of distal mutations on environmentally coupled tunneling in dihydrofolate reductase
-
Wang L, Goodey NM, Benkovic SJ, Kohen A (2006) Coordinated effects of distal mutations on environmentally coupled tunneling in dihydrofolate reductase. Proc Natl Acad Sci U S A 103: 15753-15758.
-
(2006)
Proc Natl Acad Sci U S A
, vol.103
, pp. 15753-15758
-
-
Wang, L.1
Goodey, N.M.2
Benkovic, S.J.3
Kohen, A.4
-
6
-
-
53749108150
-
Conformational changes in an ultrafast light-driven enzyme determine catalytic activity
-
Sytina OA, Heyes DJ, Hunter CN, Alexandre MT, van Stokkum IHM, et al. (2008) Conformational changes in an ultrafast light-driven enzyme determine catalytic activity. Nature 456: 1001-1004.
-
(2008)
Nature
, vol.456
, pp. 1001-1004
-
-
Sytina, O.A.1
Heyes, D.J.2
Hunter, C.N.3
Alexandre, M.T.4
van Stokkum, I.H.M.5
-
7
-
-
11844280851
-
Substrate-induced conformational changes in glycosyltransferases
-
Qasba PK, Ramakrishnan B, Boeggeman E (2005) Substrate-induced conformational changes in glycosyltransferases. Trends Biochem Sci 30: 53-62.
-
(2005)
Trends Biochem Sci
, vol.30
, pp. 53-62
-
-
Qasba, P.K.1
Ramakrishnan, B.2
Boeggeman, E.3
-
8
-
-
33646266474
-
Conformational changes in protein loops and helices induced by post-translational phosphorylation
-
Groban ES, Narayanan A, Jacobson MP (2006) Conformational changes in protein loops and helices induced by post-translational phosphorylation. PLoS Comput Biol 2: 238-250.
-
(2006)
PLoS Comput Biol
, vol.2
, pp. 238-250
-
-
Groban, E.S.1
Narayanan, A.2
Jacobson, M.P.3
-
9
-
-
0026544877
-
Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5a refined at 1.9 Åresolution - a model for a catalytic transition-state
-
Muller CW, Schulz GE (1992) Structure of the complex between adenylate kinase from Escherichia coli and the inhibitor Ap5a refined at 1.9 Åresolution - a model for a catalytic transition-state. J Mol Biol 224: 159-177.
-
(1992)
J Mol Biol
, vol.224
, pp. 159-177
-
-
Muller, C.W.1
Schulz, G.E.2
-
10
-
-
0029644168
-
Adenylate kinase motions during catalysis: An energetic counterweight balancing substrate binding
-
Muller CW, Schlauderer GJ, Reinstein J, Schulz GE (1996) Adenylate kinase motions during catalysis: An energetic counterweight balancing substrate binding. Structure 4: 147-156.
-
(1996)
Structure
, vol.4
, pp. 147-156
-
-
Muller, C.W.1
Schlauderer, G.J.2
Reinstein, J.3
Schulz, G.E.4
-
11
-
-
36148979311
-
NMR identification of transient complexes critical to adenylate kinase catalysis
-
Aden J, Wolf-Watz M (2007) NMR identification of transient complexes critical to adenylate kinase catalysis. J Am Chem Soc 129: 14003-14012.
-
(2007)
J Am Chem Soc
, vol.129
, pp. 14003-14012
-
-
Aden, J.1
Wolf-Watz, M.2
-
12
-
-
0033786922
-
Protein tyrosine kinase structure and function
-
Hubbard SR, Till JH (2000) Protein tyrosine kinase structure and function. Annu Rev Biochem 69: 373-398.
-
(2000)
Annu Rev Biochem
, vol.69
, pp. 373-398
-
-
Hubbard, S.R.1
Till, J.H.2
-
13
-
-
48249158391
-
Structure-based view of epidermal growth factor receptor regulation
-
Ferguson KM (2008) Structure-based view of epidermal growth factor receptor regulation. Annu Rev Biophys 37: 353-373.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 353-373
-
-
Ferguson, K.M.1
-
14
-
-
69249146075
-
Engineering G protein-coupled receptors to facilitate their structure determination
-
Tate CG, Schertler GF (2009) Engineering G protein-coupled receptors to facilitate their structure determination. Curr Opin Struct Biol 19: 386-395.
-
(2009)
Curr Opin Struct Biol
, vol.19
, pp. 386-395
-
-
Tate, C.G.1
Schertler, G.F.2
-
15
-
-
77649160276
-
The gates of ion channels and enzymes
-
Zhou H-X, McCammon JA (2010) The gates of ion channels and enzymes. Trends Biochem Sci 35: 179-185.
-
(2010)
Trends Biochem Sci
, vol.35
, pp. 179-185
-
-
Zhou, H.-X.1
McCammon, J.A.2
-
16
-
-
0026344818
-
Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli
-
Zimmerman SB, Trach SO (1991) Estimation of macromolecule concentrations and excluded volume effects for the cytoplasm of Escherichia coli. J Mol Biol 222: 599-620.
-
(1991)
J Mol Biol
, vol.222
, pp. 599-620
-
-
Zimmerman, S.B.1
Trach, S.O.2
-
17
-
-
67649314133
-
Crowding effects of membrane proteins
-
Zhou H-X (2009) Crowding effects of membrane proteins. J Phys Chem B 113: 7995-8005.
-
(2009)
J Phys Chem B
, vol.113
, pp. 7995-8005
-
-
Zhou, H.-X.1
-
18
-
-
41049090929
-
Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences
-
Zhou H-X, Rivas GN, Minton AP (2008) Macromolecular crowding and confinement: Biochemical, biophysical, and potential physiological consequences. Annu Rev Biophys 37: 375-397.
-
(2008)
Annu Rev Biophys
, vol.37
, pp. 375-397
-
-
Zhou, H.-X.1
Rivas, G.N.2
Minton, A.P.3
-
19
-
-
33646536078
-
The influence of macromolecular crowding on HIV-1 protease internal dynamics
-
Minh DDL, Chang CE, Trylska J, Tozzini V, McCammon JA (2006) The influence of macromolecular crowding on HIV-1 protease internal dynamics. J Am Chem Soc 128: 6006-6007.
-
(2006)
J Am Chem Soc
, vol.128
, pp. 6006-6007
-
-
Minh, D.D.L.1
Chang, C.E.2
Trylska, J.3
Tozzini, V.4
McCammon, J.A.5
-
20
-
-
16344389134
-
Molecular crowding enhances native state stability and refolding rates of globular proteins
-
Cheung MS, Klimov D, Thirumalai D (2005) Molecular crowding enhances native state stability and refolding rates of globular proteins. Proc Natl Acad Sci U S A 102: 4753-4758.
-
(2005)
Proc Natl Acad Sci U S A
, vol.102
, pp. 4753-4758
-
-
Cheung, M.S.1
Klimov, D.2
Thirumalai, D.3
-
21
-
-
61749097701
-
Crowding effects on the mechanical stability and unfolding pathways of ubiquitin
-
Pincus DL, Thirumalai D (2009) Crowding effects on the mechanical stability and unfolding pathways of ubiquitin. J Phys Chem B 113: 359-368.
-
(2009)
J Phys Chem B
, vol.113
, pp. 359-368
-
-
Pincus, D.L.1
Thirumalai, D.2
-
22
-
-
77049106311
-
Dependence of protein folding stability and dynamics on the density and composition of macromolecular crowders
-
Mittal J, Best RB (2010) Dependence of protein folding stability and dynamics on the density and composition of macromolecular crowders. Biophys J 98: 315-320.
-
(2010)
Biophys J
, vol.98
, pp. 315-320
-
-
Mittal, J.1
Best, R.B.2
-
23
-
-
68949110044
-
Atomistic modeling of macromolecular crowding predicts modest increases in protein folding and binding stability
-
Qin SB, Zhou H-X (2009) Atomistic modeling of macromolecular crowding predicts modest increases in protein folding and binding stability. Biophys J 97: 12-19.
-
(2009)
Biophys J
, vol.97
, pp. 12-19
-
-
Qin, S.B.1
Zhou, H.-X.2
-
24
-
-
77149164191
-
Method to predict crowding effects by postprocessing molecular dynamics trajectories: Application to the flap dynamics of HIV-1 protease
-
Qin SB, Minh DDL, McCammon JA, Zhou H-X (2010) Method to predict crowding effects by postprocessing molecular dynamics trajectories: application to the flap dynamics of HIV-1 protease. J Phys Chem Lett 1: 107-110.
-
(2010)
J Phys Chem Lett
, vol.1
, pp. 107-110
-
-
Qin, S.B.1
Minh, D.D.L.2
McCammon, J.A.3
Zhou, H.-X.4
-
25
-
-
68949083274
-
Effect of macromolecular crowding on protein binding stability: Modest stabilization and significant biological consequences
-
Batra J, Xu K, Qin SB, Zhou H-X (2009) Effect of macromolecular crowding on protein binding stability: Modest stabilization and significant biological consequences. Biophys J 97: 906-911.
-
(2009)
Biophys J
, vol.97
, pp. 906-911
-
-
Batra, J.1
Xu, K.2
Qin, S.B.3
Zhou, H.-X.4
-
26
-
-
77956632788
-
The folding transition-state ensemble of a four-helix bundle protein: Helix propensity as a determinant and macromolecular crowding as a probe
-
Tjong H, Zhou H-X (2010) The folding transition-state ensemble of a four-helix bundle protein: helix propensity as a determinant and macromolecular crowding as a probe. Biophys J 98: 2273-2280.
-
(2010)
Biophys J
, vol.98
, pp. 2273-2280
-
-
Tjong, H.1
Zhou, H.-X.2
-
27
-
-
30344444015
-
The crystal structure of yeast protein disulfide isomerase suggests cooperativity between its active sites
-
Tian G, Xiang S, Noiva R, Lennarz WJ, Schindelin H (2006) The crystal structure of yeast protein disulfide isomerase suggests cooperativity between its active sites. Cell 124: 61-73.
-
(2006)
Cell
, vol.124
, pp. 61-73
-
-
Tian, G.1
Xiang, S.2
Noiva, R.3
Lennarz, W.J.4
Schindelin, H.5
-
28
-
-
57749102824
-
The catalytic activity of protein-disulfide isomerase requires a conformationally flexible molecule
-
Tian G, Kober FX, Lewandrowski U, Sickmann A, Lennarz WJ, et al. (2008) The catalytic activity of protein-disulfide isomerase requires a conformationally flexible molecule. J Biol Chem 283: 33630-33640.
-
(2008)
J Biol Chem
, vol.283
, pp. 33630-33640
-
-
Tian, G.1
Kober, F.X.2
Lewandrowski, U.3
Sickmann, A.4
Lennarz, W.J.5
-
29
-
-
0034104285
-
Anatomy of a proficient enzyme: The structure of orotidine 59-monophosphate decarboxylase in the presence and absence of a potential transition state analog
-
Miller BG, Hassell AM, Wolfenden R, Milburn MV, Short SA (2000) Anatomy of a proficient enzyme: The structure of orotidine 59-monophosphate decarboxylase in the presence and absence of a potential transition state analog. Proc Natl Acad Sci U S A 97: 2011-2016.
-
(2000)
Proc Natl Acad Sci U S A
, vol.97
, pp. 2011-2016
-
-
Miller, B.G.1
Hassell, A.M.2
Wolfenden, R.3
Milburn, M.V.4
Short, S.A.5
-
30
-
-
0023900891
-
Flexibility of the DNA-binding domains of Trp repressor
-
Lawson CL, Zhang RG, Schevitz RW, Otwinowski Z, Joachimiak A, et al. (1988) Flexibility of the DNA-binding domains of Trp repressor. Proteins 3: 18-31.
-
(1988)
Proteins
, vol.3
, pp. 18-31
-
-
Lawson, C.L.1
Zhang, R.G.2
Schevitz, R.W.3
Otwinowski, Z.4
Joachimiak, A.5
-
31
-
-
33745571654
-
1.25 angstrom resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms
-
Park SY, Yokoyama T, Shibayama N, Shiro Y, Tame JRH (2006) 1.25 angstrom resolution crystal structures of human haemoglobin in the oxy, deoxy and carbonmonoxy forms. J Mol Biol 360: 690-701.
-
(2006)
J Mol Biol
, vol.360
, pp. 690-701
-
-
Park, S.Y.1
Yokoyama, T.2
Shibayama, N.3
Shiro, Y.4
Tame, J.R.H.5
-
32
-
-
0035902864
-
High resolution crystal structures of T4 phage beta-glucosyltransferase: Induced fit and effect of substrate and metal binding
-
Morera S, Lariviere L, Kurzeck J, Aschke-Sonnenborn U, Freemont PS, et al. (2001) High resolution crystal structures of T4 phage beta-glucosyltransferase: Induced fit and effect of substrate and metal binding. J Mol Biol 311: 569-577.
-
(2001)
J Mol Biol
, vol.311
, pp. 569-577
-
-
Morera, S.1
Lariviere, L.2
Kurzeck, J.3
Aschke-Sonnenborn, U.4
Freemont, P.S.5
-
33
-
-
0034613019
-
The three-dimensional structure of the Nudix enzyme diadenosine tetraphosphate hydrolase from Lupinus angustifolius L
-
Swarbrick JD, Bashtannyk T, Maksel D, Zhang XR, Blackburn GM, et al. (2000) The three-dimensional structure of the Nudix enzyme diadenosine tetraphosphate hydrolase from Lupinus angustifolius L. J Mol Biol 302: 1165-1177.
-
(2000)
J Mol Biol
, vol.302
, pp. 1165-1177
-
-
Swarbrick, J.D.1
Bashtannyk, T.2
Maksel, D.3
Zhang, X.R.4
Blackburn, G.M.5
-
34
-
-
0036174723
-
The structure of Ap4A hydrolase complexed with ATP-MgFx reveals the basis of substrate binding
-
Fletcher JI, Swarbrick JD, Maksel D, Gayler KR, Gooley PR (2002) The structure of Ap4A hydrolase complexed with ATP-MgFx reveals the basis of substrate binding. Structure 10: 205-213.
-
(2002)
Structure
, vol.10
, pp. 205-213
-
-
Fletcher, J.I.1
Swarbrick, J.D.2
Maksel, D.3
Gayler, K.R.4
Gooley, P.R.5
-
35
-
-
43849103490
-
Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm
-
Ridgway D, Broderick G, Lopez-Campistrous A, Ru'aini M, Winter P, et al. (2008) Coarse-grained molecular simulation of diffusion and reaction kinetics in a crowded virtual cytoplasm. Biophys J 94: 3748-3759.
-
(2008)
Biophys J
, vol.94
, pp. 3748-3759
-
-
Ridgway, D.1
Broderick, G.2
Lopez-Campistrous, A.3
Ru'aini, M.4
Winter, P.5
-
36
-
-
4744343045
-
Linkage between dynamics and catalysis in a thermophilicmesophilic enzyme pair
-
Wolf-Watz M, Thai V, Henzler-Wildman K, Hadjipavlou G, Eisenmesser EZ, et al. (2004) Linkage between dynamics and catalysis in a thermophilicmesophilic enzyme pair. Nat Struct Mol Biol 11: 945-949.
-
(2004)
Nat Struct Mol Biol
, vol.11
, pp. 945-949
-
-
Wolf-Watz, M.1
Thai, V.2
Henzler-Wildman, K.3
Hadjipavlou, G.4
Eisenmesser, E.Z.5
-
37
-
-
24644483073
-
Large amplitude conformational change in proteins explored with a plastic network model: Adenylate kinase
-
Maragakis P, Karplus M (2005) Large amplitude conformational change in proteins explored with a plastic network model: Adenylate kinase. J Mol Biol 352: 807-822.
-
(2005)
J Mol Biol
, vol.352
, pp. 807-822
-
-
Maragakis, P.1
Karplus, M.2
-
38
-
-
36749008588
-
Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism
-
Arora K, Brooks CL (2007) Large-scale allosteric conformational transitions of adenylate kinase appear to involve a population-shift mechanism. Proc Natl Acad Sci U S A 104: 18496-18501.
-
(2007)
Proc Natl Acad Sci U S A
, vol.104
, pp. 18496-18501
-
-
Arora, K.1
Brooks, C.L.2
-
39
-
-
36849048228
-
Intrinsic motions along an enzymatic reaction trajectory
-
Henzler-Wildman KA, Thai V, Lei M, Ott M, Wolf-Watz M, et al. (2007) Intrinsic motions along an enzymatic reaction trajectory. Nature 450: 838-844.
-
(2007)
Nature
, vol.450
, pp. 838-844
-
-
Henzler-Wildman, K.A.1
Thai, V.2
Lei, M.3
Ott, M.4
Wolf-Watz, M.5
-
40
-
-
67649173263
-
Mechanism of the orotidine 59-monophosphate decarboxylase-catalyzed reaction: Effect of solvent viscosity on kinetic constants
-
Wood BM, Chan KK, Amyes TL, Richard JP, Gerlt JA (2009) Mechanism of the orotidine 59-monophosphate decarboxylase-catalyzed reaction: effect of solvent viscosity on kinetic constants. Biochemistry 48: 5510-5517.
-
(2009)
Biochemistry
, vol.48
, pp. 5510-5517
-
-
Wood, B.M.1
Chan, K.K.2
Amyes, T.L.3
Richard, J.P.4
Gerlt, J.A.5
-
41
-
-
0033525472
-
Functional properties of the two redox-active sites in yeast protein disulphide isomerase in vitro and in vivo
-
Westphal V, Darby NJ, Winther JR (1999) Functional properties of the two redox-active sites in yeast protein disulphide isomerase in vitro and in vivo. J Mol Biol 286: 1229-1239.
-
(1999)
J Mol Biol
, vol.286
, pp. 1229-1239
-
-
Westphal, V.1
Darby, N.J.2
Winther, J.R.3
-
42
-
-
0017700307
-
The oxygen affinity of concentrated human hemoglobin solutions and human blood
-
Horvath SM, Malenfant A, Rossi F, Rossi-Bernardi L (1977) The oxygen affinity of concentrated human hemoglobin solutions and human blood. Am J Hematol 2: 343-354.
-
(1977)
Am J Hematol
, vol.2
, pp. 343-354
-
-
Horvath, S.M.1
Malenfant, A.2
Rossi, F.3
Rossi-Bernardi, L.4
-
43
-
-
15244361470
-
Molecular crowding limits the role of fetal hemoglobin in therapy for sickle cell disease
-
Rotter M, Aprelev A, Adachi K, Ferrone FA (2005) Molecular crowding limits the role of fetal hemoglobin in therapy for sickle cell disease. J Mol Biol 347: 1015-1023.
-
(2005)
J Mol Biol
, vol.347
, pp. 1015-1023
-
-
Rotter, M.1
Aprelev, A.2
Adachi, K.3
Ferrone, F.A.4
-
44
-
-
29544433937
-
Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder
-
McNulty BC, Young GB, Pielak GJ (2006) Macromolecular crowding in the Escherichia coli periplasm maintains alpha-synuclein disorder. J Mol Biol 355: 893-897.
-
(2006)
J Mol Biol
, vol.355
, pp. 893-897
-
-
McNulty, B.C.1
Young, G.B.2
Pielak, G.J.3
-
45
-
-
0037177250
-
Molecular crowding accelerates fibrillization of a-synuclein: Could an increase in the cytoplasmic protein concentration induce Parkinson's disease?
-
Shtilerman MD, Ding TT, Lansbury PT, Jr. (2002) Molecular crowding accelerates fibrillization of a-synuclein: could an increase in the cytoplasmic protein concentration induce Parkinson's disease? Biochemistry 41: 3855-3860.
-
(2002)
Biochemistry
, vol.41
, pp. 3855-3860
-
-
Shtilerman, M.D.1
Ding, T.T.2
Lansbury Jr., P.T.3
-
46
-
-
0037181497
-
Accelerated asynuclein fibrillation in crowded milieu
-
Uversky VN, Cooper EM, Bower KS, Li J, Fink AL (2002) Accelerated asynuclein fibrillation in crowded milieu. FEBS Lett 515: 99-103.
-
(2002)
FEBS Lett
, vol.515
, pp. 99-103
-
-
Uversky, V.N.1
Cooper, E.M.2
Bower, K.S.3
Li, J.4
Fink, A.L.5
-
47
-
-
70350654363
-
What recent ribosome structures have revealed about the mechanism of translation
-
Schmeing TM, Ramakrishnan V (2009) What recent ribosome structures have revealed about the mechanism of translation. Nature 461: 1234-1242.
-
(2009)
Nature
, vol.461
, pp. 1234-1242
-
-
Schmeing, T.M.1
Ramakrishnan, V.2
-
48
-
-
42049086762
-
Rate and accuracy of bacterial protein synthesis revisited
-
Johansson M, Lovmar M, Ehrenberg M (2008) Rate and accuracy of bacterial protein synthesis revisited. Curr Opin Microbiol 11: 141-147.
-
(2008)
Curr Opin Microbiol
, vol.11
, pp. 141-147
-
-
Johansson, M.1
Lovmar, M.2
Ehrenberg, M.3
-
49
-
-
0034075255
-
MRNA composition and control of bacterial gene expression
-
Liang ST, Xu YC, Dennis P, Bremer H (2000) mRNA composition and control of bacterial gene expression. J Bacteriol 182: 3037-3044.
-
(2000)
J Bacteriol
, vol.182
, pp. 3037-3044
-
-
Liang, S.T.1
Xu, Y.C.2
Dennis, P.3
Bremer, H.4
-
50
-
-
0042640726
-
Some topics in the theory of fluids
-
Widom B (1963) Some topics in the theory of fluids. J Chem Phys 39: 2802-2812.
-
(1963)
J Chem Phys
, vol.39
, pp. 2802-2812
-
-
Widom, B.1
-
51
-
-
77950158041
-
Generalized fundamental measure theory for atomistic modeling of macromolecular crowding
-
Qin SB, Zhou H-X (2010) Generalized fundamental measure theory for atomistic modeling of macromolecular crowding. Phys Rev E 81: 031919.
-
(2010)
Phys Rev E
, vol.81
, pp. 031919
-
-
Qin, S.B.1
Zhou, H.-X.2
-
52
-
-
21244460338
-
General methods for free-volume theory
-
Oversteegen SM, Roth R (2005) General methods for free-volume theory. J Chem Phys 122: 214502.
-
(2005)
J Chem Phys
, vol.122
, pp. 214502
-
-
Oversteegen, S.M.1
Roth, R.2
-
53
-
-
0017429069
-
Areas, volumes, packing and protein structure
-
Richards FM (1977) Areas, volumes, packing and protein structure. Annu Rev Biophys Bioeng 6: 151-176.
-
(1977)
Annu Rev Biophys Bioeng
, vol.6
, pp. 151-176
-
-
Richards, F.M.1
-
55
-
-
84986519238
-
The weighted histogram analysis method for free-energy calculations on biomolecules. 1. The method
-
Kumar S, Bouzida D, Swendsen RH, Kollman PA, Rosenberg JM (1992) The weighted histogram analysis method for free-energy calculations on biomolecules. 1. The method. J Comp Chem 13: 1011-1021.
-
(1992)
J Comp Chem
, vol.13
, pp. 1011-1021
-
-
Kumar, S.1
Bouzida, D.2
Swendsen, R.H.3
Kollman, P.A.4
Rosenberg, J.M.5
-
56
-
-
0029633155
-
The calculation of the potential of mean force using computer simulations
-
Roux B (1995) The calculation of the potential of mean force using computer simulations. Comp Phys Commun 91: 275-282.
-
(1995)
Comp Phys Commun
, vol.91
, pp. 275-282
-
-
Roux, B.1
-
57
-
-
0034718457
-
Yeast Orotidine-5 9-Phosphate decarboxylase: Steady-state and pre-steady-state analysis of the kinetic mechanism of substrate decarboxylation
-
Porter DJT, Short SA (2000) Yeast Orotidine-5 9-Phosphate decarboxylase: Steady-state and pre-steady-state analysis of the kinetic mechanism of substrate decarboxylation. Biochemistry 39: 11788-11800.
-
(2000)
Biochemistry
, vol.39
, pp. 11788-11800
-
-
Porter, D.J.T.1
Short, S.A.2
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