-
1
-
-
0001422329
-
Quantitative model for gene regulation by lambda phage repressor
-
Ackers, G. K., Johnson, A. D. and Shea, M. A. (1982). Quantitative model for gene regulation by lambda phage repressor. Proc. Natl. Acad. Sci. USA 79, 1129-1133.
-
(1982)
Proc. Natl. Acad. Sci. USA
, vol.79
, pp. 1129-1133
-
-
Ackers, G.K.1
Johnson, A.D.2
Shea, M.A.3
-
2
-
-
84883829346
-
Modeling a snap-action, variable-delay switch controlling extrinsic cell death
-
Albeck, J. G., Burke, J. M., Spencer, S. L., Lauffenburger, D. A. and Sorger, P. K. (2008). Modeling a snap-action, variable-delay switch controlling extrinsic cell death. PLoS Biol. 6, 2831-2852.
-
(2008)
PLoS Biol.
, vol.6
, pp. 2831-2852
-
-
Albeck, J.G.1
Burke, J.M.2
Spencer, S.L.3
Lauffenburger, D.A.4
Sorger, P.K.5
-
3
-
-
12344296412
-
Mathematical modeling of planar cell polarity to understand domineering nonautonomy
-
Amonlirdviman, K., Khare, N. A., Tree, D. R. P., Chen, W.-S., Axelrod, J. D. and Tomlin, C. J. (2005). Mathematical modeling of planar cell polarity to understand domineering nonautonomy. Science 307, 423-426.
-
(2005)
Science
, vol.307
, pp. 423-426
-
-
Amonlirdviman, K.1
Khare, N.A.2
Tree, D.R.P.3
Chen, W.-S.4
Axelrod, J.D.5
Tomlin, C.J.6
-
4
-
-
0031879114
-
Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells
-
Arkin, A., Ross, J. and McAdams, H. H. (1998). Stochastic kinetic analysis of developmental pathway bifurcation in phage lambda-infected Escherichia coli cells. Genetics 149, 1633-1648.
-
(1998)
Genetics
, vol.149
, pp. 1633-1648
-
-
Arkin, A.1
Ross, J.2
McAdams, H.H.3
-
5
-
-
77954647251
-
A model for genetic and epigenetic regulatory networks identifies rare pathways for transcription factor induced pluripotency
-
Artyomov, M. N., Meissner, A. and Chakraborty, A. K. (2010). A model for genetic and epigenetic regulatory networks identifies rare pathways for transcription factor induced pluripotency. PLoS Comput. Biol. 6, e1000785.
-
(2010)
PLoS Comput. Biol.
, vol.6
-
-
Artyomov, M.N.1
Meissner, A.2
Chakraborty, A.K.3
-
6
-
-
70449112801
-
Progress and challenges in understanding planar cell polarity signaling
-
Axelrod, J. D. (2009). Progress and challenges in understanding planar cell polarity signaling. Semin. Cell Dev. Biol. 20, 964-971.
-
(2009)
Semin. Cell Dev. Biol.
, vol.20
, pp. 964-971
-
-
Axelrod, J.D.1
-
7
-
-
0035902045
-
Mae mediates MAP kinase phosphorylation of Ets transcription factors in Drosophila
-
Baker, D. A., Mille-Baker, B., Wainwright, S. M., Ish-Horowicz, D. and Dibb, N. J. (2001). Mae mediates MAP kinase phosphorylation of Ets transcription factors in Drosophila. Nature 411, 330-334.
-
(2001)
Nature
, vol.411
, pp. 330-334
-
-
Baker, D.A.1
Mille-Baker, B.2
Wainwright, S.M.3
Ish-Horowicz, D.4
Dibb, N.J.5
-
8
-
-
0028836162
-
Drosophila eye development: Notch and Delta amplify a neurogenic pattern conferred on the morphogenetic furrow by scabrous
-
Baker, N. E. and Zitron, A. E. (1995). Drosophila eye development: Notch and Delta amplify a neurogenic pattern conferred on the morphogenetic furrow by scabrous. Mech. Dev. 49, 173-189.
-
(1995)
Mech. Dev.
, vol.49
, pp. 173-189
-
-
Baker, N.E.1
Zitron, A.E.2
-
9
-
-
0031080740
-
Proneural function of neurogenic genes in the developing Drosophila eye
-
Baker, N. E. and Yu, S. Y. (1997). Proneural function of neurogenic genes in the developing Drosophila eye. Curr. Biol. 7, 122-132. (Pubitemid 27155621)
-
(1997)
Current Biology
, vol.7
, Issue.2
, pp. 122-132
-
-
Baker, N.E.1
Yu, S.-Y.2
-
10
-
-
0030266604
-
Evolution of proneural atonal expression during distinct regulatory phases in the developing Drosophila eye
-
Baker, N. E., Yu, S. and Han, D. (1996). Evolution of proneural atonal expression during distinct regulatory phases in the developing Drosophila eye. Curr. Biol. 6, 1290-1301. (Pubitemid 27004914)
-
(1996)
Current Biology
, vol.6
, Issue.10
, pp. 1290-1301
-
-
Baker, N.E.1
Yu, S.2
Han, D.3
-
11
-
-
0034766281
-
Notch signalling and the initiation of neural development in the Drosophila eye
-
Baonza, A. and Freeman, M. (2001). Notch signalling and the initiation of neural development in the Drosophila eye. Development 128, 3889-3898. (Pubitemid 33040598)
-
(2001)
Development
, vol.128
, Issue.20
, pp. 3889-3898
-
-
Baonza, A.1
Freeman, M.2
-
12
-
-
60749102185
-
Systems biology: Attractors and democratic dynamics
-
Bar-Yam, Y., Harmon, D. and de Bivort, B. (2009). Systems biology: attractors and democratic dynamics. Science 323, 1016-1017.
-
(2009)
Science
, vol.323
, pp. 1016-1017
-
-
Bar-Yam, Y.1
Harmon, D.2
De Bivort, B.3
-
13
-
-
59449084719
-
A simple polymerase chain reaction-based method for the construction of recombinase-mediated cassette exchange donor vectors
-
Bateman, J. R. and Wu, C. T. (2008). A simple polymerase chain reaction-based method for the construction of recombinase-mediated cassette exchange donor vectors. Genetics 180, 1763-1766.
-
(2008)
Genetics
, vol.180
, pp. 1763-1766
-
-
Bateman, J.R.1
Wu, C.T.2
-
14
-
-
17144456808
-
Positive feedback in eukaryotic gene networks: Cell differentiation by graded to binary response conversion
-
DOI 10.1093/emboj/20.10.2528
-
Becskei, A., Séraphin, B. and Serrano, L. (2001). Positive feedback in eukaryotic gene networks: cell differentiation by graded to binary response conversion. EMBO J. 20, 2528-2535. (Pubitemid 32452871)
-
(2001)
EMBO Journal
, vol.20
, Issue.10
, pp. 2528-2535
-
-
Becskei, A.1
Seraphin, B.2
Serrano, L.3
-
15
-
-
33947598711
-
Two types of Drosophila R7 photoreceptor cells are arranged randomly: A model for stochastic cell-fate determination
-
Bell, M. L., Earl, J. B. and Britt, S. G. (2007). Two types of Drosophila R7 photoreceptor cells are arranged randomly: a model for stochastic cell-fate determination. J. Comp. Neurol. 502, 75-85.
-
(2007)
J. Comp. Neurol.
, vol.502
, pp. 75-85
-
-
Bell, M.L.1
Earl, J.B.2
Britt, S.G.3
-
16
-
-
46249114829
-
Scaling of the BMP activation gradient in Xenopus embryos
-
DOI 10.1038/nature07059, PII NATURE07059
-
Ben-Zvi, D., Shilo, B.-Z., Fainsod, A. and Barkai, N. (2008). Scaling of the BMP activation gradient in Xenopus embryos. Nature 453, 1205-1211. (Pubitemid 351913602)
-
(2008)
Nature
, vol.453
, Issue.7199
, pp. 1205-1211
-
-
Ben-Zvi, D.1
Shilo, B.-Z.2
Fainsod, A.3
Barkai, N.4
-
17
-
-
15744394192
-
Transcriptional regulation by the numbers: Models
-
Bintu, L., Buchler, N. E., Garcia, H. G., Gerland, U., Hwa, T., Kondev, J. and Phillips, R. (2005). Transcriptional regulation by the numbers: models. Curr. Opin. Genet. Dev. 15, 116-124.
-
(2005)
Curr. Opin. Genet. Dev.
, vol.15
, pp. 116-124
-
-
Bintu, L.1
Buchler, N.E.2
Garcia, H.G.3
Gerland, U.4
Hwa, T.5
Kondev, J.6
Phillips, R.7
-
18
-
-
63849216852
-
Rhomboid mediates specification of blue- and green-sensitive R8 photoreceptor cells in Drosophila
-
Birkholz, D. A., Chou, W.-H., Phistry, M. M. and Britt, S. G. (2009). rhomboid mediates specification of blue- and green-sensitive R8 photoreceptor cells in Drosophila. J. Neurosci. 29, 2666-2675.
-
(2009)
J. Neurosci.
, vol.29
, pp. 2666-2675
-
-
Birkholz, D.A.1
Chou, W.-H.2
Phistry, M.M.3
Britt, S.G.4
-
19
-
-
0027984806
-
The ETS domain protein pointed-P2 is a target of MAP kinase in the sevenless signal transduction pathway
-
DOI 10.1038/370386a0
-
Brunner, D., Ducker, K., Oellers, N., Hafen, E., Scholz, H. and Klambt, C. (1994). The ETS domain protein pointed-P2 is a target of MAP kinase in the sevenless signal transduction pathway. Nature 370, 386-389. (Pubitemid 24259764)
-
(1994)
Nature
, vol.370
, Issue.6488
, pp. 386-389
-
-
Brunner, D.1
Ducker, K.2
Oeller, N.3
Hafen, E.4
Scholz, H.5
Klambt, C.6
-
20
-
-
33645027986
-
Stochastic protein expression in individual cells at the single molecule level
-
Cai, L., Friedman, N. and Xie, X. S. (2006). Stochastic protein expression in individual cells at the single molecule level. Nature 440, 358-362.
-
(2006)
Nature
, vol.440
, pp. 358-362
-
-
Cai, L.1
Friedman, N.2
Xie, X.S.3
-
21
-
-
0037381625
-
In vivo analysis of a developmental circuit for direct transcriptional activation and repression in the same cell by a Runx protein
-
DOI 10.1101/gad.1064803
-
Canon, J. and Banerjee, U. (2003). In vivo analysis of a developmental circuit for direct transcriptional activation and repression in the same cell by a Runx protein. Genes Dev. 17, 838-843. (Pubitemid 36397372)
-
(2003)
Genes and Development
, vol.17
, Issue.7
, pp. 838-843
-
-
Canon, J.1
Banerjee, U.2
-
22
-
-
33645097646
-
Multistable and multistep dynamics in neutrophil differentiation
-
Chang, H., Oh, P., Ingber, D. and Huang, S. (2006). Multistable and multistep dynamics in neutrophil differentiation. BMC Cell Biol. 7, 11.
-
(2006)
BMC Cell Biol.
, vol.7
, pp. 11
-
-
Chang, H.1
Oh, P.2
Ingber, D.3
Huang, S.4
-
23
-
-
44349162752
-
Transcriptome-wide noise controls lineage choice in mammalian progenitor cells
-
DOI 10.1038/nature06965, PII NATURE06965
-
Chang, H. H., Hemberg, M., Barahona, M., Ingber, D. E. and Huang, S. (2008). Transcriptome-wide noise controls lineage choice in mammalian progenitor cells. Nature 453, 544-547. (Pubitemid 351733323)
-
(2008)
Nature
, vol.453
, Issue.7194
, pp. 544-547
-
-
Chang, H.H.1
Hemberg, M.2
Barahona, M.3
Ingber, D.E.4
Huang, S.5
-
24
-
-
44649101853
-
Asymmetric Homotypic Interactions of the Atypical Cadherin Flamingo Mediate Intercellular Polarity Signaling
-
DOI 10.1016/j.cell.2008.04.048, PII S0092867408006806
-
Chen, W.-S., Antic, D., Matis, M., Logan, C. Y., Povelones, M., Anderson, G. A., Nusse, R. and Axelrod, J. D. (2008). Asymmetric homotypic interactions of the atypical cadherin flamingo mediate intercellular polarity signaling. Cell 133, 1093-1105. (Pubitemid 351787749)
-
(2008)
Cell
, vol.133
, Issue.6
, pp. 1093-1105
-
-
Chen, W.-S.1
Antic, D.2
Matis, M.3
Logan, C.Y.4
Povelones, M.5
Anderson, G.A.6
Nusse, R.7
Axelrod, J.D.8
-
25
-
-
54249083606
-
A stochastic single-molecule event triggers phenotype switching of a bacterial cell
-
Choi, P. J., Cai, L., Frieda, K. and Xie, X. S. (2008). A stochastic single-molecule event triggers phenotype switching of a bacterial cell. Science 322, 442-446.
-
(2008)
Science
, vol.322
, pp. 442-446
-
-
Choi, P.J.1
Cai, L.2
Frieda, K.3
Xie, X.S.4
-
26
-
-
0030450107
-
Identification of a novel Drosophila opsin reveals specific patterning of the R7 and R8 photoreceptor cells
-
Chou, W. H., Hall, K. J., Wilson, D. B., Wideman, C. L., Townson, S. M., Chadwell, L. V. and Britt, S. G. (1996). Identification of a novel Drosophila opsin reveals specific patterning of the R7 and R8 photoreceptor cells. Neuron 17, 1101-1115.
-
(1996)
Neuron
, vol.17
, pp. 1101-1115
-
-
Chou, W.H.1
Hall, K.J.2
Wilson, D.B.3
Wideman, C.L.4
Townson, S.M.5
Chadwell, L.V.6
Britt, S.G.7
-
27
-
-
0033006701
-
Patterning of the R7 and R8 photoreceptor cells of Drosophila: Evidence for induced and default cell-fate specification
-
Chou, W. H., Huber, A., Bentrop, J., Schulz, S., Schwab, K., Chadwell, L. V., Paulsen, R. and Britt, S. G. (1999). Patterning of the R7 and R8 photoreceptor cells of Drosophila: evidence for induced and default cell-fate specification. Development 126, 607-616. (Pubitemid 29106168)
-
(1999)
Development
, vol.126
, Issue.4
, pp. 607-616
-
-
Chou, W.-H.1
Huber, A.2
Bentrop, J.3
Schulz, S.4
Schwab, K.5
Chadwell, L.V.6
Paulsen, R.7
Britt, S.G.8
-
28
-
-
0036306859
-
Positive and negative feedback: Striking a balance between necessary antagonists
-
Cinquin, O. and Demongeot, J. (2002). Positive and negative feedback: striking a balance between necessary antagonists. J. Theor. Biol. 216, 229-241.
-
(2002)
J. Theor. Biol.
, vol.216
, pp. 229-241
-
-
Cinquin, O.1
Demongeot, J.2
-
29
-
-
11844273196
-
High-dimensional switches and the modelling of cellular differentiation
-
Cinquin, O. and Demongeot, J. (2005). High-dimensional switches and the modelling of cellular differentiation. J. Theor. Biol. 233, 391-411.
-
(2005)
J. Theor. Biol.
, vol.233
, pp. 391-411
-
-
Cinquin, O.1
Demongeot, J.2
-
30
-
-
0037942564
-
Distinction between color photoreceptor cell fates is controlled by Prospero in Drosophila
-
Cook, T., Pichaud, F., Sonneville, R., Papatsenko, D. and Desplan, C. (2003). Distinction between color photoreceptor cell fates is controlled by Prospero in Drosophila. Dev. Cell 4, 853-864.
-
(2003)
Dev. Cell
, vol.4
, pp. 853-864
-
-
Cook, T.1
Pichaud, F.2
Sonneville, R.3
Papatsenko, D.4
Desplan, C.5
-
31
-
-
0033545302
-
Frizzled regulation of Notch signalling polarizes cell fate in the Drosophila eye
-
Cooper, M. T. and Bray, S. J. (1999). Frizzled regulation of Notch signalling polarizes cell fate in the Drosophila eye. Nature 397, 526-530.
-
(1999)
Nature
, vol.397
, pp. 526-530
-
-
Cooper, M.T.1
Bray, S.J.2
-
32
-
-
0034735944
-
R7 photoreceptor specification requires Notch activity
-
Cooper, M. T. and Bray, S. J. (2000). R7 photoreceptor specification requires Notch activity. Curr. Biol. 10, 1507-1510.
-
(2000)
Curr. Biol.
, vol.10
, pp. 1507-1510
-
-
Cooper, M.T.1
Bray, S.J.2
-
33
-
-
0036111640
-
The atypical cadherin Flamingo links Frizzled and Notch signaling in planar polarity establishment in the Drosophila eye
-
Das, G., Reynolds-Kenneally, J. and Mlodzik, M. (2002). The atypical cadherin Flamingo links Frizzled and Notch signaling in planar polarity establishment in the Drosophila eye. Dev. Cell 2, 655-666.
-
(2002)
Dev. Cell
, vol.2
, pp. 655-666
-
-
Das, G.1
Reynolds-Kenneally, J.2
Mlodzik, M.3
-
34
-
-
6944227630
-
Diego interacts with Prickle and Strabismus/Van Gogh to localize planar cell polarity complexes
-
Das, G., Jenny, A., Klein, T. J., Eaton, S. and Mlodzik, M. (2004). Diego interacts with Prickle and Strabismus/Van Gogh to localize planar cell polarity complexes. Development 131, 4467-4476.
-
(2004)
Development
, vol.131
, pp. 4467-4476
-
-
Das, G.1
Jenny, A.2
Klein, T.J.3
Eaton, S.4
Mlodzik, M.5
-
35
-
-
34249080596
-
Theoretical Analysis of Epigenetic Cell Memory by Nucleosome Modification
-
DOI 10.1016/j.cell.2007.02.053, PII S0092867407004588
-
Dodd, I. B., Micheelsen, M. A., Sneppen, K. and Thon, G. (2007). Theoretical analysis of epigenetic cell memory by nucleosome modification. Cell 129, 813-822. (Pubitemid 46802381)
-
(2007)
Cell
, vol.129
, Issue.4
, pp. 813-822
-
-
Dodd, I.B.1
Micheelsen, M.A.2
Sneppen, K.3
Thon, G.4
-
36
-
-
0030453079
-
Atonal, rough and the resolution of proneural clusters in the developing Drosophila retina
-
Dokucu, M. E., Zipursky, S. L. and Cagan, R. L. (1996). Atonal, rough and the resolution of proneural clusters in the developing Drosophila retina. Development 122, 4139-4147. (Pubitemid 27033905)
-
(1996)
Development
, vol.122
, Issue.12
, pp. 4139-4147
-
-
Dokucu, M.E.1
Zipursky, S.L.2
Cagan, R.L.3
-
37
-
-
4043177706
-
Regulation of R7 and R8 differentiation by the spalt genes
-
Domingos, P. M., Brown, S., Barrio, R., Ratnakumar, K., Frankfort, B. J., Mardon, G., Steller, H. and Mollereau, B. (2004). Regulation of R7 and R8 differentiation by the spalt genes. Dev. Biol. 273, 121-133.
-
(2004)
Dev. Biol.
, vol.273
, pp. 121-133
-
-
Domingos, P.M.1
Brown, S.2
Barrio, R.3
Ratnakumar, K.4
Frankfort, B.J.5
Mardon, G.6
Steller, H.7
Mollereau, B.8
-
38
-
-
33748058888
-
Bistability in bacteria
-
Dubnau, D. and Losick, R. (2006). Bistability in bacteria. Mol. Microbiol. 61, 564-572.
-
(2006)
Mol. Microbiol.
, vol.61
, pp. 564-572
-
-
Dubnau, D.1
Losick, R.2
-
39
-
-
0024568697
-
A genetic switch, based on negative regulation, sharpens stripes in greater embryos
-
Edgar, B. A., Odell, G. M. and Schubiger, G. (1989). A genetic switch, based on negative regulation, sharpens stripes in greater embryos. Dev. Genet. 10, 124-142.
-
(1989)
Dev. Genet.
, vol.10
, pp. 124-142
-
-
Edgar, B.A.1
Odell, G.M.2
Schubiger, G.3
-
40
-
-
34249932435
-
Probing transcription factor dynamics at the single-molecule level in a living cell
-
DOI 10.1126/science.1141967
-
Elf, J., Li, G.-W. and Xie, X. S. (2007). Probing transcription factor dynamics at the single-molecule level in a living cell. Science 316, 1191-1194. (Pubitemid 46877481)
-
(2007)
Science
, vol.316
, Issue.5828
, pp. 1191-1194
-
-
Elf, J.1
Li, G.-W.2
Xie, X.S.3
-
41
-
-
0033545322
-
Asymmetric Notch activation specifies photoreceptors R3 and R4 and planar polarity in the Drosophila eye
-
Fanto, M. and Mlodzik, M. (1999). Asymmetric Notch activation specifies photoreceptors R3 and R4 and planar polarity in the Drosophila eye. Nature 397, 523-526.
-
(1999)
Nature
, vol.397
, pp. 523-526
-
-
Fanto, M.1
Mlodzik, M.2
-
42
-
-
0036532226
-
Self-perpetuating states in signal transduction: Positive feedback, double-negative feedback and bistability
-
Ferrell, J. E., Jr (2002). Self-perpetuating states in signal transduction: positive feedback, double-negative feedback and bistability. Curr. Opin. Cell Biol. 14, 140-148.
-
(2002)
Curr. Opin. Cell Biol.
, vol.14
, pp. 140-148
-
-
Ferrell Jr., J.E.1
-
43
-
-
0034730331
-
Combinatorial signaling in the specification of unique cell fates
-
Flores, G. V., Duan, H., Yan, H., Nagaraj, R., Fu, W., Zou, Y., Noll, M. and Banerjee, U. (2000). Combinatorial signaling in the specification of unique cell fates. Cell 103, 75-85.
-
(2000)
Cell
, vol.103
, pp. 75-85
-
-
Flores, G.V.1
Duan, H.2
Yan, H.3
Nagaraj, R.4
Fu, W.5
Zou, Y.6
Noll, M.7
Banerjee, U.8
-
44
-
-
0026575220
-
Signalling by the sevenless protein tyrosine kinase is mimicked by Ras1 activation
-
Fortini, M. E., Simon, M. A. and Rubin, G. M. (1992). Signalling by the sevenless protein tyrosine kinase is mimicked by Ras1 activation. Nature 355, 559-561.
-
(1992)
Nature
, vol.355
, pp. 559-561
-
-
Fortini, M.E.1
Simon, M.A.2
Rubin, G.M.3
-
45
-
-
70049108481
-
A model of sequential branching in hierarchical cell fate determination
-
Foster, D. V., Foster, J. G., Huang, S. and Kauffman, S. A. (2009). A model of sequential branching in hierarchical cell fate determination. J. Theor. Biol. 260, 589-597.
-
(2009)
J. Theor. Biol.
, vol.260
, pp. 589-597
-
-
Foster, D.V.1
Foster, J.G.2
Huang, S.3
Kauffman, S.A.4
-
46
-
-
0019793972
-
Fluorescence of photoreceptor cells observed in vivo
-
Franceschini, N., Kirschfeld, K. and Minke, B. (1981). Fluorescence of photoreceptor cells observed in vivo. Science 213, 1264-1267. (Pubitemid 11019615)
-
(1981)
Science
, vol.213
, Issue.4513
, pp. 1264-1267
-
-
Franceschini, N.1
Kirschfeld, K.2
Minke, B.3
-
47
-
-
1242352578
-
Senseless represses nuclear transduction of Egfr pathway activation
-
Frankfort, B. J. and Mardon, G. (2004). Senseless represses nuclear transduction of Egfr pathway activation. Development 131, 563-570.
-
(2004)
Development
, vol.131
, pp. 563-570
-
-
Frankfort, B.J.1
Mardon, G.2
-
48
-
-
0035829683
-
Senseless repression of rough is required for R8 photoreceptor differentiation in the developing Drosophila eye
-
DOI 10.1016/S0896-6273(01)00480-9
-
Frankfort, B. J., Nolo, R., Zhang, Z., Bellen, H. and Mardon, G. (2001). senseless repression of rough is required for R8 photoreceptor differentiation in the developing Drosophila eye. Neuron 32, 403-414. (Pubitemid 33082042)
-
(2001)
Neuron
, vol.32
, Issue.3
, pp. 403-414
-
-
Frankfort, B.J.1
Nolo, R.2
Zhang, Z.3
Bellen, H.4
Mardon, G.5
-
49
-
-
0030584086
-
Reiterative use of the EGF receptor triggers differentiation of all cell types in the Drosophila eye
-
Freeman, M. (1996). Reiterative use of the EGF receptor triggers differentiation of all cell types in the Drosophila eye. Cell 87, 651-660.
-
(1996)
Cell
, vol.87
, pp. 651-660
-
-
Freeman, M.1
-
50
-
-
0029904093
-
EGF receptor signaling induces pointed P1 transcription and inactivates Yan protein in the Drosophila embryonic ventral ectoderm
-
Gabay, L., Scholz, H., Golembo, M., Klaes, A., Shilo, B. Z. and Klambt, C. (1996). EGF receptor signaling induces pointed P1 transcription and inactivates Yan protein in the Drosophila embryonic ventral ectoderm. Development 122, 3355-3362. (Pubitemid 26395978)
-
(1996)
Development
, vol.122
, Issue.11
, pp. 3355-3362
-
-
Gabay, L.1
Scholz, H.2
Golembo, M.3
Klaes, A.4
Shilo, B.-Z.5
Klambt, C.6
-
51
-
-
0034688174
-
Construction of a genetic toggle switch in Escherichia coli
-
DOI 10.1038/35002131
-
Gardner, T. S., Cantor, C. R. and Collins, J. J. (2000). Construction of a genetic toggle switch in Escherichia coli. Nature 403, 339-342. (Pubitemid 30062394)
-
(2000)
Nature
, vol.403
, Issue.6767
, pp. 339-342
-
-
Gardner, T.S.1
Cantor, C.R.2
Collins, J.J.3
-
52
-
-
71449125977
-
Forcing cells to change lineages
-
Graf, T. and Enver, T. (2009). Forcing cells to change lineages. Nature 462, 587-594.
-
(2009)
Nature
, vol.462
, pp. 587-594
-
-
Graf, T.1
Enver, T.2
-
53
-
-
77954632586
-
Modelling the Bicoid gradient
-
Grimm, O., Coppey, M. and Wieschaus, E. (2010). Modelling the Bicoid gradient. Development 137, 2253-2264.
-
(2010)
Development
, vol.137
, pp. 2253-2264
-
-
Grimm, O.1
Coppey, M.2
Wieschaus, E.3
-
54
-
-
35748977901
-
Universally sloppy parameter sensitivities in systems biology models
-
Gutenkunst, R. N., Waterfall, J. J., Casey, F. P., Brown, K. S., Myers, C. R. and Sethna, J. P. (2007). Universally sloppy parameter sensitivities in systems biology models. PLoS Comp. Biol. 3, 1871-1878.
-
(2007)
PLoS Comp. Biol.
, vol.3
, pp. 1871-1878
-
-
Gutenkunst, R.N.1
Waterfall, J.J.2
Casey, F.P.3
Brown, K.S.4
Myers, C.R.5
Sethna, J.P.6
-
55
-
-
0023107398
-
Sevenless, a cell-specific homeotic gene of Drosophila, encodes a putative transmembrane receptor with a tyrosine kinase domain
-
Hafen, E., Basler, K., Edstroem, J. E. and Rubin, G. M. (1987). Sevenless, a cell-specific homeotic gene of Drosophila, encodes a putative transmembrane receptor with a tyrosine kinase domain. Science 236, 55-63. (Pubitemid 17056812)
-
(1987)
Science
, vol.236
, Issue.4797
, pp. 55-63
-
-
Hafen, E.1
Basler, K.2
Edstroem, J.-E.3
Rubin, G.M.4
-
56
-
-
0032529684
-
Specification of primary pigment cell and outer photoreceptor fates by BarH1 homeobox gene in the developing Drosophila eye
-
DOI 10.1006/dbio.1998.8959
-
Hayashi, T., Kojima, T. and Saigo, K. (1998). Specification of primary pigment cell and outer photoreceptor fates by BarH1 homeobox gene in the developing Drosophila eye. Dev. Biol. 200, 131-145. (Pubitemid 28395108)
-
(1998)
Developmental Biology
, vol.200
, Issue.2
, pp. 131-145
-
-
Hayashi, T.1
Kojima, T.2
Saigo, K.3
-
57
-
-
52449097968
-
Cell-type-specific transcription of prospero is controlled by combinatorial signaling in the Drosophila eye
-
Hayashi, T., Xu, C. and Carthew, R. W. (2008). Cell-type-specific transcription of prospero is controlled by combinatorial signaling in the Drosophila eye. Development 135, 2787-2796.
-
(2008)
Development
, vol.135
, pp. 2787-2796
-
-
Hayashi, T.1
Xu, C.2
Carthew, R.W.3
-
58
-
-
0025971830
-
The choice of cell fate in the epidermis of drosophila
-
Heitzler, P. and Simpson, P. (1991). The choice of cell fate in the epidermis of Drosophila. Cell 64, 1083-1092. (Pubitemid 121001195)
-
(1991)
Cell
, vol.64
, Issue.6
, pp. 1083-1092
-
-
Heitzler, P.1
Simpson, P.2
-
59
-
-
0026552381
-
Dual Bar homeo box genes of Drosophila required in two photoreceptor cells, R1 and R6, and primary pigment cells for normal eye development
-
Higashijima, S., Kojima, T., Michiue, T., Ishimaru, S., Emori, Y. and Saigo, K. (1992). Dual Bar homeo box genes of Drosophila required in two photoreceptor cells, R1 and R6, and primary pigment cells for normal eye development. Genes Dev. 6, 50-60.
-
(1992)
Genes Dev.
, vol.6
, pp. 50-60
-
-
Higashijima, S.1
Kojima, T.2
Michiue, T.3
Ishimaru, S.4
Emori, Y.5
Saigo, K.6
-
60
-
-
0027317851
-
Ectopic expression of seven-up causes cell fate changes during ommatidial assembly
-
Hiromi, Y., Mlodzik, M., West, S. R., Rubin, G. M. and Goodman, C. S. (1993). Ectopic expression of seven-up causes cell fate changes during ommatidial assembly. Development 118, 1123-1135. (Pubitemid 23252402)
-
(1993)
Development
, vol.118
, Issue.4
, pp. 1123-1135
-
-
Hiromi, Y.1
Miodzik, M.2
West, S.R.3
Rubin, G.M.4
Goodman, C.S.5
-
61
-
-
66449090934
-
Reprogramming cell fates: Reconciling rarity with robustness
-
Huang, S. (2009). Reprogramming cell fates: reconciling rarity with robustness. BioEssays 31, 546-560.
-
(2009)
BioEssays
, vol.31
, pp. 546-560
-
-
Huang, S.1
-
62
-
-
18144408736
-
Cell fates as high-dimensional attractor states of a complex gene regulatory network
-
Huang, S., Eichler, G., Bar-Yam, Y. and Ingber, D. E. (2005). Cell fates as high-dimensional attractor states of a complex gene regulatory network. Phys. Rev. Lett. 94, 128701.
-
(2005)
Phys. Rev. Lett.
, vol.94
, pp. 128701
-
-
Huang, S.1
Eichler, G.2
Bar-Yam, Y.3
Ingber, D.E.4
-
63
-
-
69549115070
-
Selective plane illumination microscopy techniques in developmental biology
-
Huisken, J. and Stainier, D. Y. R. (2009). Selective plane illumination microscopy techniques in developmental biology. Development 136, 1963-1975.
-
(2009)
Development
, vol.136
, pp. 1963-1975
-
-
Huisken, J.1
Stainier, D.Y.R.2
-
64
-
-
0036332852
-
Cross-repressive interactions of identity genes are essential for proper specification of cardiac and muscular fates in Drosophila
-
Jagla, T., Bidet, Y., Ponte, J. P. D., Dastugue, B. and Jagla, K. (2002). Cross-repressive interactions of identity genes are essential for proper specification of cardiac and muscular fates in Drosophila. Development 129, 1037-1047. (Pubitemid 34874127)
-
(2002)
Development
, vol.129
, Issue.4
, pp. 1037-1047
-
-
Jagla, T.1
Bidet, Y.2
Da Ponte, J.P.3
Dastugue, B.4
Jagla, K.5
-
65
-
-
0028275740
-
Atonal Is the proneural gene for Drosophila photoreceptors
-
DOI 10.1038/369398a0
-
Jarman, A. P., Grell, E. H., Ackerman, L., Jan, L. Y. and Jan, Y. N. (1994). Atonal is the proneural gene for Drosophila photoreceptors. Nature 369, 398-400. (Pubitemid 24184052)
-
(1994)
Nature
, vol.369
, Issue.6479
, pp. 398-400
-
-
Jarman, A.P.1
Grell, E.H.2
Ackerman, L.3
Jan, L.Y.4
Jan, Y.N.5
-
66
-
-
0029069560
-
Role of the proneural gene, atonal, in formation of Drosophila chordotonal organs and photoreceptors
-
Jarman, A. P., Sun, Y., Jan, L. Y. and Jan, Y. N. (1995). Role of the proneural gene, atonal, in formation of Drosophila chordotonal organs and photoreceptors. Development 121, 2019-2030.
-
(1995)
Development
, vol.121
, pp. 2019-2030
-
-
Jarman, A.P.1
Sun, Y.2
Jan, L.Y.3
Jan, Y.N.4
-
67
-
-
0041736696
-
Prickle and strabismus form a functional complex to generate a correct axis during planar cell polarity signaling
-
DOI 10.1093/emboj/cdg424
-
Jenny, A., Darken, R. S., Wilson, P. A. and Mlodzik, M. (2003). Prickle and Strabismus form a functional complex to generate a correct axis during planar cell polarity signaling. EMBO J. 22, 4409-4420. (Pubitemid 37087195)
-
(2003)
EMBO Journal
, vol.22
, Issue.17
, pp. 4409-4420
-
-
Jenny, A.1
Darken, R.S.2
Wilson, P.A.3
Mlodzik, M.4
-
69
-
-
0029869355
-
A screen for genes that function downstream of Ras1 during Drosophila eye development
-
Karim, F. D., Chang, H. C., Therrien, M., Wassarman, D. A., Laverty, T. and Rubin, G. M. (1996). A screen for genes that function downstream of Ras1 during Drosophila eye development. Genetics 143, 315-329. (Pubitemid 26136994)
-
(1996)
Genetics
, vol.143
, Issue.1
, pp. 315-329
-
-
Karim, F.D.1
Chang, H.C.2
Therrien, M.3
Wassarman, D.A.4
Laverty, T.5
Rubin, G.M.6
-
70
-
-
0014671878
-
Homeostasis and differentiation in random genetic control networks
-
Kauffman, S. (1969). Homeostasis and differentiation in random genetic control networks. Nature 224, 177-178.
-
(1969)
Nature
, vol.224
, pp. 177-178
-
-
Kauffman, S.1
-
71
-
-
27744538492
-
Planar cell polarization: An emerging model points in the right direction
-
Klein, T. J. and Mlodzik, M. (2005). Planar cell polarization: an emerging model points in the right direction. Annu. Rev. Cell Dev. Biol. 21, 155-176.
-
(2005)
Annu. Rev. Cell Dev. Biol.
, vol.21
, pp. 155-176
-
-
Klein, T.J.1
Mlodzik, M.2
-
72
-
-
22144452865
-
Hysteresis in a synthetic mammalian gene network
-
Kramer, B. P. and Fussenegger, M. (2005). Hysteresis in a synthetic mammalian gene network. Proc. Natl. Acad. Sci. USA 102, 9517-9522.
-
(2005)
Proc. Natl. Acad. Sci. USA
, vol.102
, pp. 9517-9522
-
-
Kramer, B.P.1
Fussenegger, M.2
-
73
-
-
34347232364
-
Combinatorial transcriptional control of the lactose operon of Escherichia coli
-
DOI 10.1073/pnas.0606717104
-
Kuhlman, T., Zhang, Z., Saier, M. H. and Hwa, T. (2007). Combinatorial transcriptional control of the lactose operon of Escherichia coli. Proc. Natl. Acad. Sci. USA 104, 6043-6048. (Pubitemid 47175655)
-
(2007)
Proceedings of the National Academy of Sciences of the United States of America
, vol.104
, Issue.14
, pp. 6043-6048
-
-
Kuhlman, T.1
Zhang, Z.2
Saier Jr., M.H.3
Hwa, T.4
-
74
-
-
0026723089
-
Negative control of photoreceptor development in Drosophila by the product of the yan gene, an ETS domain protein
-
Lai, Z. C. and Rubin, G. M. (1992). Negative control of photoreceptor development in Drosophila by the product of the yan gene, an ETS domain protein. Cell 70, 609-620.
-
(1992)
Cell
, vol.70
, pp. 609-620
-
-
Lai, Z.C.1
Rubin, G.M.2
-
75
-
-
33747196725
-
Multilineage transcriptional priming and determination of alternate hematopoietic cell fates
-
Laslo, P., Spooner, C., Warmflash, A., Lancki, D., Lee, H., Sciammas, R., Gantner, B., Dinner, A. R. and Singh, H. (2006). Multilineage transcriptional priming and determination of alternate hematopoietic cell fates. Cell 126, 755-766.
-
(2006)
Cell
, vol.126
, pp. 755-766
-
-
Laslo, P.1
Spooner, C.2
Warmflash, A.3
Lancki, D.4
Lee, H.5
Sciammas, R.6
Gantner, B.7
Dinner, A.R.8
Singh, H.9
-
76
-
-
50849139175
-
Gene regulatory networks directing myeloid and lymphoid cell fates within the immune system
-
Laslo, P., Pongubala, J. M. R., Lancki, D. W. and Singh, H. (2008). Gene regulatory networks directing myeloid and lymphoid cell fates within the immune system. Semin. Immunol. 20, 228-235.
-
(2008)
Semin. Immunol.
, vol.20
, pp. 228-235
-
-
Laslo, P.1
Pongubala, J.M.R.2
Lancki, D.W.3
Singh, H.4
-
77
-
-
34250781731
-
Planar cell polarity: One or two pathways?
-
Lawrence, P. A., Struhl, G. and Casal, J. (2007). Planar cell polarity: one or two pathways? Nat. Rev. Genet. 8, 555-563.
-
(2007)
Nat. Rev. Genet.
, vol.8
, pp. 555-563
-
-
Lawrence, P.A.1
Struhl, G.2
Casal, J.3
-
78
-
-
54149090848
-
Planar cell polarity: A bridge too far?
-
Lawrence, P. A., Struhl, G. and Casal, J. (2008). Planar cell polarity: a bridge too far? Curr. Biol. 18, 959-961.
-
(2008)
Curr. Biol.
, vol.18
, pp. 959-961
-
-
Lawrence, P.A.1
Struhl, G.2
Casal, J.3
-
79
-
-
48649083341
-
Modeling polarity buildup and cell fate decision in the fly eye: Insight into the connection between the PCP and Notch pathways
-
Le Garrec, J.-F. and Kerszberg, M. (2008). Modeling polarity buildup and cell fate decision in the fly eye: insight into the connection between the PCP and Notch pathways. Dev. Genes Evol. 218, 413-426.
-
(2008)
Dev. Genes Evol.
, vol.218
, pp. 413-426
-
-
Le Garrec, J.-F.1
Kerszberg, M.2
-
80
-
-
33644979436
-
Establishment and maintenance of planar epithelial cell polarity by asymmetric cadherin bridges: A computer model
-
Le Garrec, J.-F., Lopez, P. and Kerszberg, M. (2006). Establishment and maintenance of planar epithelial cell polarity by asymmetric cadherin bridges: a computer model. Dev. Dyn. 235, 235-246.
-
(2006)
Dev. Dyn.
, vol.235
, pp. 235-246
-
-
Le Garrec, J.-F.1
Lopez, P.2
Kerszberg, M.3
-
81
-
-
0030790796
-
Photoreceptor cell differentiation requires regulated proteolysis of the transcriptional repressor Tramtrack
-
Li, S., Li, Y., Carthew, R. W. and Lai, Z. C. (1997). Photoreceptor cell differentiation requires regulated proteolysis of the transcriptional repressor Tramtrack. Cell 90, 469-478.
-
(1997)
Cell
, vol.90
, pp. 469-478
-
-
Li, S.1
Li, Y.2
Carthew, R.W.3
Lai, Z.C.4
-
82
-
-
29244437868
-
A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye
-
Li, X. and Carthew, R. W. (2005). A microRNA mediates EGF receptor signaling and promotes photoreceptor differentiation in the Drosophila eye. Cell 123, 1267-1277.
-
(2005)
Cell
, vol.123
, pp. 1267-1277
-
-
Li, X.1
Carthew, R.W.2
-
83
-
-
64249144494
-
A microRNA imparts robustness against environmental fluctuation during development
-
Li, X., Cassidy, J. J., Reinke, C. A., Fischboeck, S. and Carthew, R. W. (2009). A microRNA imparts robustness against environmental fluctuation during development. Cell 137, 273-282.
-
(2009)
Cell
, vol.137
, pp. 273-282
-
-
Li, X.1
Cassidy, J.J.2
Reinke, C.A.3
Fischboeck, S.4
Carthew, R.W.5
-
84
-
-
34547820240
-
Progress toward construction and modelling of a tri-stable toggle switch in E. coli
-
Lohmueller, J., Neretti, N., Hickey, B., Kaka, A., Gao, A., Lemon, J., Lattanzi, V., Goldstein, P., Tam, L. K., Schmidt, M. et al. (2007). Progress toward construction and modelling of a tri-stable toggle switch in E. coli. Synth. Biol. 1, 25-28.
-
(2007)
Synth. Biol.
, vol.1
, pp. 25-28
-
-
Lohmueller, J.1
Neretti, N.2
Hickey, B.3
Kaka, A.4
Gao, A.5
Lemon, J.6
Lattanzi, V.7
Goldstein, P.8
Tam, L.K.9
Schmidt, M.10
-
85
-
-
52949139446
-
Spatial bistability generates hunchback expression sharpness in the Drosophila embryo
-
Lopes, F. J., Vieira, F. M., Holloway, D. M., Bisch, P. M. and Spirov, A. V. (2008). Spatial bistability generates hunchback expression sharpness in the Drosophila embryo. PLoS Comput. Biol. 4, e1000184.
-
(2008)
PLoS Comput. Biol.
, vol.4
-
-
Lopes, F.J.1
Vieira, F.M.2
Holloway, D.M.3
Bisch, P.M.4
Spirov, A.V.5
-
86
-
-
17844376743
-
Dynamics of Drosophila embryonic patterning network perturbed in space and time using microfluidics
-
Lucchetta, E. M., Lee, J. H., Fu, L. A., Patel, N. H. and Ismagilov, R. F. (2005). Dynamics of Drosophila embryonic patterning network perturbed in space and time using microfluidics. Nature 434, 1134-1138.
-
(2005)
Nature
, vol.434
, pp. 1134-1138
-
-
Lucchetta, E.M.1
Lee, J.H.2
Fu, L.A.3
Patel, N.H.4
Ismagilov, R.F.5
-
87
-
-
70449570480
-
The endo-siRNA pathway is essential for robust development of the Drosophila embryo
-
Lucchetta, E. M., Carthew, R. W. and Ismagilov, R. F. (2009). The endo-siRNA pathway is essential for robust development of the Drosophila embryo. PLoS ONE 4, e7576.
-
(2009)
PLoS ONE
, vol.4
-
-
Lucchetta, E.M.1
Carthew, R.W.2
Ismagilov, R.F.3
-
88
-
-
36049017660
-
Models of biological pattern formation: From elementary steps to the organization of embryonic axes
-
Meinhardt, H. (2008). Models of biological pattern formation: from elementary steps to the organization of embryonic axes. Curr. Top. Dev. Biol. 81, 1-63.
-
(2008)
Curr. Top. Dev. Biol.
, vol.81
, pp. 1-63
-
-
Meinhardt, H.1
-
89
-
-
49649125042
-
Genome-scale DNA methylation maps of pluripotent and differentiated cells
-
Meissner, A., Mikkelsen, T. S., Gu, H., Wernig, M., Hanna, J., Sivachenko, A., Zhang, X., Bernstein, B. E., Nusbaum, C., Jaffe, D. B. et al. (2008). Genome-scale DNA methylation maps of pluripotent and differentiated cells. Nature 454, 766-770.
-
(2008)
Nature
, vol.454
, pp. 766-770
-
-
Meissner, A.1
Mikkelsen, T.S.2
Gu, H.3
Wernig, M.4
Hanna, J.5
Sivachenko, A.6
Zhang, X.7
Bernstein, B.E.8
Nusbaum, C.9
Jaffe, D.B.10
-
90
-
-
24144492150
-
The growth regulators warts/lats and melted interact in a bistable loop to specify opposite fates in Drosophila R8 photoreceptors
-
DOI 10.1016/j.cell.2005.07.026, PII S0092867405007579
-
Mikeladze-Dvali, T., Wernet, M. F., Pistillo, D., Mazzoni, E. O., Teleman, A. A., Chen, Y.-W., Cohen, S. and Desplan, C. (2005). The growth regulators warts/lats and melted interact in a bistable loop to specify opposite fates in Drosophila R8 photoreceptors. Cell 122, 775-787. (Pubitemid 41242641)
-
(2005)
Cell
, vol.122
, Issue.5
, pp. 775-787
-
-
Mikeladze-Dvali, T.1
Wernet, M.F.2
Pistillo, D.3
Mazzoni, E.O.4
Teleman, A.A.5
Chen, Y.-W.6
Cohen, S.7
Desplan, C.8
-
91
-
-
34547624303
-
Genomewide maps of chromatin state in pluripotent and lineage-committed cells
-
Mikkelsen, T. S., Ku, M., Jaffe, D. B., Issac, B., Lieberman, E., Giannoukos, G., Alvarez, P., Brockman, W., Kim, T. K., Koche, R. P. et al. (2007). Genomewide maps of chromatin state in pluripotent and lineage-committed cells. Nature 448, 553-560.
-
(2007)
Nature
, vol.448
, pp. 553-560
-
-
Mikkelsen, T.S.1
Ku, M.2
Jaffe, D.B.3
Issac, B.4
Lieberman, E.5
Giannoukos, G.6
Alvarez, P.7
Brockman, W.8
Kim, T.K.9
Koche, R.P.10
-
92
-
-
40949162758
-
Loss of seven-up from Drosophila R1/R6 photoreceptors reveals a stochastic fate choice that is normally biased by Notch
-
DOI 10.1242/dev.016386
-
Miller, A. C., Seymour, H., King, C. and Herman, T. G. (2008). Loss of seven-up from Drosophila R1/R6 photoreceptors reveals a stochastic fate choice that is normally biased by Notch. Development 135, 707-715. (Pubitemid 351405024)
-
(2008)
Development
, vol.135
, Issue.4
, pp. 707-715
-
-
Miller, A.C.1
Seymour, H.2
King, C.3
Herman, T.G.4
-
93
-
-
0025122035
-
The Drosophila seven-up gene, a member of the steroid receptor gene superfamily, controls photoreceptor cell fates
-
Mlodzik, M., Hiromi, Y., Weber, U., Goodman, C. S. and Rubin, G. M. (1990). The Drosophila seven-up gene, a member of the steroid receptor gene superfamily, controls photoreceptor cell fates. Cell 60, 211-224.
-
(1990)
Cell
, vol.60
, pp. 211-224
-
-
Mlodzik, M.1
Hiromi, Y.2
Weber, U.3
Goodman, C.S.4
Rubin, G.M.5
-
94
-
-
73049167504
-
General conclusions: Teleonomic mechanisms in cellular metabolism, growth, and differentiation
-
Monod, J. and Jacob, F. (1961). General conclusions: teleonomic mechanisms in cellular metabolism, growth, and differentiation. Cold Spring Harbor Symp. Quant. Biol. 26, 389-401.
-
(1961)
Cold Spring Harbor Symp. Quant. Biol.
, vol.26
, pp. 389-401
-
-
Monod, J.1
Jacob, F.2
-
95
-
-
57349197819
-
Morphogenetic cell movements: Diversity from modular mechanical properties
-
Montell, D. J. (2008). Morphogenetic cell movements: diversity from modular mechanical properties. Science 322, 1502-1505.
-
(2008)
Science
, vol.322
, pp. 1502-1505
-
-
Montell, D.J.1
-
96
-
-
34547725214
-
Generating patterned arrays of photoreceptors
-
Morante, J., Desplan, C. and Celik, A. (2007). Generating patterned arrays of photoreceptors. Curr. Opin. Genet. Dev. 17, 314-319.
-
(2007)
Curr. Opin. Genet. Dev.
, vol.17
, pp. 314-319
-
-
Morante, J.1
Desplan, C.2
Celik, A.3
-
98
-
-
0001389945
-
Enzyme induction as an all-or-none phenomenon
-
Novick, A. and Weiner, M. (1957). Enzyme induction as an all-or-none phenomenon. Proc. Natl. Acad. Sci. USA 43, 553-566.
-
(1957)
Proc. Natl. Acad. Sci. USA
, vol.43
, pp. 553-566
-
-
Novick, A.1
Weiner, M.2
-
99
-
-
67651083469
-
Quantitative approaches in developmental biology
-
Oates, A. C., Gorfinkiel, N., González-Gaitán, M. and Heisenberg, C.-P. (2009). Quantitative approaches in developmental biology. Nat. Rev. Genet. 10, 517-530.
-
(2009)
Nat. Rev. Genet.
, vol.10
, pp. 517-530
-
-
Oates, A.C.1
Gorfinkiel, N.2
González-Gaitán, M.3
Heisenberg, C.-P.4
-
100
-
-
0028239896
-
The activities of two Ets-related transcription factors required for Drosophila eye development are modulated by the Ras/MAPK pathway
-
DOI 10.1016/0092-8674(94)90580-0
-
O'Neill, E. M., Rebay, I., Tjian, R. and Rubin, G. M. (1994). The activities of two Ets-related transcription factors required for Drosophila eye development are modulated by the Ras/MAPK pathway. Cell 78, 137-147. (Pubitemid 24228308)
-
(1994)
Cell
, vol.78
, Issue.1
, pp. 137-147
-
-
O'Neill, E.M.1
Rebay, I.2
Tjian, R.3
Rubin, G.M.4
-
101
-
-
77954640500
-
Switch and template pattern formation in a discrete reaction diffusion system inspired by the Drosophila eye
-
in press
-
Pennington, M. W. and Lubensky, D. K. (2010). Switch and template pattern formation in a discrete reaction diffusion system inspired by the Drosophila eye. Quant. Biol. (in press).
-
(2010)
Quant. Biol.
-
-
Pennington, M.W.1
Lubensky, D.K.2
-
102
-
-
60849115616
-
Two-step selection of a single R8 photoreceptor: A bistable loop between senseless and rough locks in R8 fate
-
Pepple, K. L., Atkins, M., Venken, K., Wellnitz, K., Harding, M., Frankfort, B. and Mardon, G. (2008). Two-step selection of a single R8 photoreceptor: a bistable loop between senseless and rough locks in R8 fate. Development 135, 4071-4079.
-
(2008)
Development
, vol.135
, pp. 4071-4079
-
-
Pepple, K.L.1
Atkins, M.2
Venken, K.3
Wellnitz, K.4
Harding, M.5
Frankfort, B.6
Mardon, G.7
-
103
-
-
66149107091
-
Hindsight modulates Delta expression during Drosophila cone cell induction
-
Pickup, A. T., Ming, L. and Lipshitz, H. D. (2009). Hindsight modulates Delta expression during Drosophila cone cell induction. Development 136, 975-982.
-
(2009)
Development
, vol.136
, pp. 975-982
-
-
Pickup, A.T.1
Ming, L.2
Lipshitz, H.D.3
-
105
-
-
3242688256
-
Derepression by depolymerization: Structural insights into the regulation of Yan by Mae
-
DOI 10.1016/j.cell.2004.07.010, PII S0092867404006634
-
Qiao, F., Song, H., Kim, C. A., Sawaya, M. R., Hunter, J. B., Gingery, M., Courey, A. J., Rebay, I. and Bowie, J. U. (2004). Derepression by depolymerization: structural insights into the regulation of Yan by Mae. Cell 118, 163-173. (Pubitemid 38962573)
-
(2004)
Cell
, vol.118
, Issue.2
, pp. 163-173
-
-
Qiao, F.1
Song, H.2
Kim, C.A.3
Sawaya, M.R.4
Hunter, J.B.5
Gingery, M.6
Rebay, I.7
Courey, A.J.8
Bowie, J.U.9
-
106
-
-
0017110220
-
Development of the Drosophila retina, a neurocrystalline lattice
-
Ready, D. F., Hanson, T. E. and Benzer, S. (1976). Development of the Drosophila retina, a neurocrystalline lattice. Dev. Biol. 53, 217-240.
-
(1976)
Dev. Biol.
, vol.53
, pp. 217-240
-
-
Ready, D.F.1
Hanson, T.E.2
Benzer, S.3
-
107
-
-
0029019928
-
Yan functions as a general inhibitor of differentiation and is negatively regulated by activation of the Ras1/MAPK pathway
-
Rebay, I. and Rubin, G. M. (1995). Yan functions as a general inhibitor of differentiation and is negatively regulated by activation of the Ras1/MAPK pathway. Cell 81, 857-866.
-
(1995)
Cell
, vol.81
, pp. 857-866
-
-
Rebay, I.1
Rubin, G.M.2
-
108
-
-
0025122786
-
Theoretical and experimental analysis of the phage lambda genetic Switch implies missing levels of co-operativity
-
Reinitz, J. and Vaisnys, J. R. (1990). Theoretical and experimental analysis of the phage lambda genetic switch implies missing levels of co-operativity. J. Theor. Biol. 145, 295-318. (Pubitemid 20255214)
-
(1990)
Journal of Theoretical Biology
, vol.145
, Issue.3
, pp. 295-318
-
-
Reinitz, J.1
Vaisnys, J.R.2
-
109
-
-
0037006801
-
Notch activation of yan expression is antagonized by RTK/pointed signaling in the Drosophila eye
-
DOI 10.1016/S0960-9822(02)00743-1, PII S0960982202007431
-
Rohrbaugh, M., Ramos, E., Nguyen, D., Price, M., Wen, Y. and Lai, Z. C. (2002). Notch activation of yan expression is antagonized by RTK/Pointed signaling in the Drosophila eye. Curr. Biol. 12, 576-581. (Pubitemid 34271372)
-
(2002)
Current Biology
, vol.12
, Issue.7
, pp. 576-581
-
-
Rohrbaugh, M.1
Ramos, E.2
Nguyen, D.3
Price, M.4
Wen, Y.5
Lai, Z.-C.6
-
110
-
-
69449105296
-
Pattern formation in the Drosophila eye disc
-
Roignant, J.-Y. and Treisman, J. E. (2009). Pattern formation in the Drosophila eye disc. Int. J. Dev. Biol. 53, 795-804.
-
(2009)
Int. J. Dev. Biol.
, vol.53
, pp. 795-804
-
-
Roignant, J.-Y.1
Treisman, J.E.2
-
111
-
-
15544371346
-
Gene regulation at the single-cell level
-
Rosenfeld, N., Young, J. W., Alon, U., Swain, P. S. and Elowitz, M. B. (2005). Gene regulation at the single-cell level. Science 307, 1962-1965.
-
(2005)
Science
, vol.307
, pp. 1962-1965
-
-
Rosenfeld, N.1
Young, J.W.2
Alon, U.3
Swain, P.S.4
Elowitz, M.B.5
-
112
-
-
29144433945
-
Inferring the in vivo looping properties of DNA
-
DOI 10.1073/pnas.0505693102
-
Saiz, L., Rubi, J. M. and Vilar, J. M. G. (2005). Inferring the in vivo looping properties of DNA. Proc. Natl. Acad. Sci. USA 102, 17642-17645. (Pubitemid 41803550)
-
(2005)
Proceedings of the National Academy of Sciences of the United States of America
, vol.102
, Issue.49
, pp. 17642-17645
-
-
Saiz, L.1
Rubi, J.M.2
Vilar, J.M.G.3
-
113
-
-
0346688719
-
Why the lysogenic state of phage lambda is so stable: A mathematical modeling approach
-
Santillán, M. and Mackey, M. C. (2004). Why the lysogenic state of phage lambda is so stable: a mathematical modeling approach. Biophys. J. 86, 75-84.
-
(2004)
Biophys. J.
, vol.86
, pp. 75-84
-
-
Santillán, M.1
Mackey, M.C.2
-
114
-
-
0038610819
-
Detailed map of a cis-regulatory input function
-
DOI 10.1073/pnas.1230759100
-
Setty, Y., Mayo, A. E., Surette, M. G. and Alon, U. (2003). Detailed map of a cis-regulatory input function. Proc. Natl. Acad. Sci. USA 100, 7702-7707. (Pubitemid 36760033)
-
(2003)
Proceedings of the National Academy of Sciences of the United States of America
, vol.100
, Issue.13
, pp. 7702-7707
-
-
Setty, Y.1
Mayo, A.E.2
Surette, M.G.3
Alon, U.4
-
115
-
-
67349100615
-
Determination of cell fates in the R7 equivalence group of the Drosophila eye by the concerted regulation of D-Pax2 and TTK88
-
Shi, Y. and Noll, M. (2009). Determination of cell fates in the R7 equivalence group of the Drosophila eye by the concerted regulation of D-Pax2 and TTK88. Dev. Biol. 331, 68-77.
-
(2009)
Dev. Biol.
, vol.331
, pp. 68-77
-
-
Shi, Y.1
Noll, M.2
-
116
-
-
33845301220
-
WNT and DKK determine hair follicle spacing through a reaction-diffusion mechanism
-
Sick, S., Reinker, S., Timmer, J. and Schlake, T. (2006). WNT and DKK determine hair follicle spacing through a reaction-diffusion mechanism. Science 314, 1447-1450.
-
(2006)
Science
, vol.314
, pp. 1447-1450
-
-
Sick, S.1
Reinker, S.2
Timmer, J.3
Schlake, T.4
-
117
-
-
70449510513
-
The capacity for multistability in small gene regulatory networks
-
Siegal-Gaskins, D., Grotewold, E. and Smith, G. D. (2009). The capacity for multistability in small gene regulatory networks. BMC Syst. Biol. 3, 96.
-
(2009)
BMC Syst. Biol.
, vol.3
, pp. 96
-
-
Siegal-Gaskins, D.1
Grotewold, E.2
Smith, G.D.3
-
118
-
-
77952092577
-
Cis-interactions between Notch and Delta generate mutually exclusive signalling states
-
Sprinzak, D., Lakhanpal, A., Lebon, L., Santat, L. A., Fontes, M. E., Anderson, G. A., Garcia-Ojalvo, J. and Elowitz, M. B. (2010). Cis-interactions between Notch and Delta generate mutually exclusive signalling states. Nature 465, 86-90.
-
(2010)
Nature
, vol.465
, pp. 86-90
-
-
Sprinzak, D.1
Lakhanpal, A.2
Lebon, L.3
Santat, L.A.4
Fontes, M.E.5
Anderson, G.A.6
Garcia-Ojalvo, J.7
Elowitz, M.B.8
-
119
-
-
0037076213
-
Asymmetric localization of frizzled and the determination of notch-dependent cell fate in the Drosophila eye
-
Strutt, D., Johnson, R., Cooper, K. and Bray, S. (2002). Asymmetric localization of frizzled and the determination of notch-dependent cell fate in the Drosophila eye. Curr. Biol. 12, 813-824.
-
(2002)
Curr. Biol.
, vol.12
, pp. 813-824
-
-
Strutt, D.1
Johnson, R.2
Cooper, K.3
Bray, S.4
-
120
-
-
54149117229
-
Differential stability of flamingo protein complexes underlies the establishment of planar polarity
-
Strutt, H. and Strutt, D. (2008). Differential stability of flamingo protein complexes underlies the establishment of planar polarity. Curr. Biol. 18, 1555-1564.
-
(2008)
Curr. Biol.
, vol.18
, pp. 1555-1564
-
-
Strutt, H.1
Strutt, D.2
-
121
-
-
70449133721
-
Asymmetric localisation of planar polarity proteins: Mechanisms and consequences
-
Strutt, H. and Strutt, D. (2009). Asymmetric localisation of planar polarity proteins: mechanisms and consequences. Semin. Cell Dev. Biol. 20, 957-963.
-
(2009)
Semin. Cell Dev. Biol.
, vol.20
, pp. 957-963
-
-
Strutt, H.1
Strutt, D.2
-
122
-
-
77950580571
-
Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer
-
Swanson, C. I., Evans, N. C. and Barolo, S. (2010). Structural rules and complex regulatory circuitry constrain expression of a Notch- and EGFR-regulated eye enhancer. Dev. Cell 18, 359-370.
-
(2010)
Dev. Cell
, vol.18
, pp. 359-370
-
-
Swanson, C.I.1
Evans, N.C.2
Barolo, S.3
-
123
-
-
22944488274
-
Drosophila Melted modulates FOXO and TOR activity
-
Teleman, A. A., Chen, Y.-W. and Cohen, S. M. (2005). Drosophila Melted modulates FOXO and TOR activity. Dev. Cell 9, 271-281.
-
(2005)
Dev. Cell
, vol.9
, pp. 271-281
-
-
Teleman, A.A.1
Chen, Y.-W.2
Cohen, S.M.3
-
124
-
-
0001624107
-
Cell fate in the drosophila ommatidium
-
Tomlinson, A. and Ready, D. F. (1987). Cell fate in the drosophila ommatidium. Dev. Biol. 123, 264-275.
-
(1987)
Dev. Biol.
, vol.123
, pp. 264-275
-
-
Tomlinson, A.1
Ready, D.F.2
-
125
-
-
0035265969
-
Delta/Notch and Boss/Sevenless signals act combinatorially to specify the Drosophila R7 photoreceptor
-
Tomlinson, A. and Struhl, G. (2001). Delta/Notch and Boss/Sevenless signals act combinatorially to specify the Drosophila R7 photoreceptor. Mol. Cell 7, 487-495.
-
(2001)
Mol. Cell
, vol.7
, pp. 487-495
-
-
Tomlinson, A.1
Struhl, G.2
-
126
-
-
0037348614
-
CRM1-mediated nuclear export and regulated activity of the receptor tyrosine kinase antagonist YAN require specific interactions with MAE
-
Tootle, T. L., Lee, P. S. and Rebay, I. (2003). CRM1-mediated nuclear export and regulated activity of the receptor tyrosine kinase antagonist YAN require specific interactions with MAE. Development 130, 845-857.
-
(2003)
Development
, vol.130
, pp. 845-857
-
-
Tootle, T.L.1
Lee, P.S.2
Rebay, I.3
-
128
-
-
33746813251
-
Robust, bistable patterning of the dorsal surface of the Drosophila embryo
-
Umulis, D. M., Serpe, M., O'Connor, M. B. and Othmer, H. G. (2006). Robust, bistable patterning of the dorsal surface of the Drosophila embryo. Proc. Natl. Acad. Sci. USA 103, 11613-11618.
-
(2006)
Proc. Natl. Acad. Sci. USA
, vol.103
, pp. 11613-11618
-
-
Umulis, D.M.1
Serpe, M.2
O'Connor, M.B.3
Othmer, H.G.4
-
129
-
-
33845698104
-
P[acman]: A BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster
-
Venken, K. J. T., He, Y., Hoskins, R. A. and Bellen, H. J. (2006). P[acman]: a BAC transgenic platform for targeted insertion of large DNA fragments in D. melanogaster. Science 314, 1747-1751.
-
(2006)
Science
, vol.314
, pp. 1747-1751
-
-
Venken, K.J.T.1
He, Y.2
Hoskins, R.A.3
Bellen, H.J.4
-
130
-
-
80055118974
-
Mesoscopic fluorescence tomography for in-vivo imaging of developing Drosophila
-
Vinegoni, C., Razansky, D., Pitsouli, C., Perrimon, N., Ntziachristos, V. and Weissleder, R. (2009). Mesoscopic fluorescence tomography for in-vivo imaging of developing Drosophila. J. Vis. Exp. 30, 1510.
-
(2009)
J. Vis. Exp.
, vol.30
, pp. 1510
-
-
Vinegoni, C.1
Razansky, D.2
Pitsouli, C.3
Perrimon, N.4
Ntziachristos, V.5
Weissleder, R.6
-
131
-
-
7044232153
-
MAE, a dual regulator of the EGFR signaling pathway, is a target of the Ets transcription factors PNT and YAN
-
Vivekanand, P., Tootle, T. L. and Rebay, I. (2004). MAE, a dual regulator of the EGFR signaling pathway, is a target of the Ets transcription factors PNT and YAN. Mech. Dev. 121, 1469-1479.
-
(2004)
Mech. Dev.
, vol.121
, pp. 1469-1479
-
-
Vivekanand, P.1
Tootle, T.L.2
Rebay, I.3
-
132
-
-
0347417016
-
Signal integration during development: Insights from the Drosophila eye
-
Voas, M. G. and Rebay, I. (2004). Signal integration during development: insights from the Drosophila eye. Dev. Dyn. 229, 162-175.
-
(2004)
Dev. Dyn.
, vol.229
, pp. 162-175
-
-
Voas, M.G.1
Rebay, I.2
-
134
-
-
66149145491
-
Bistable switches control memory and plasticity in cellular differentiation
-
Wang, L., Walker, B. L., Iannaccone, S., Bhatt, D., Kennedy, P. J. and Tse, W. T. (2009). Bistable switches control memory and plasticity in cellular differentiation. Proc. Natl. Acad. Sci. USA 106, 6638-6643.
-
(2009)
Proc. Natl. Acad. Sci. USA
, vol.106
, pp. 6638-6643
-
-
Wang, L.1
Walker, B.L.2
Iannaccone, S.3
Bhatt, D.4
Kennedy, P.J.5
Tse, W.T.6
-
135
-
-
15044338867
-
Spatial bistability of Dpp-receptor interactions during Drosophila dorsal-ventral patterning
-
Wang, Y.-C. and Ferguson, E. L. (2005). Spatial bistability of Dpp-receptor interactions during Drosophila dorsal-ventral patterning. Nature 434, 229-234.
-
(2005)
Nature
, vol.434
, pp. 229-234
-
-
Wang, Y.-C.1
Ferguson, E.L.2
-
136
-
-
77951672776
-
Modeling gene regulatory networks for cell fate specification
-
ed. M. H. Zaman, Cambridge: Cambridge University Press
-
Warmflash, A. and Dinner, A. R. (2009). Modeling gene regulatory networks for cell fate specification. In Statistical Mechanics of Cellular Systems and Processes (ed. M. H. Zaman), pp. 121-154. Cambridge: Cambridge University Press.
-
(2009)
Statistical Mechanics of Cellular Systems and Processes
, pp. 121-154
-
-
Warmflash, A.1
Dinner, A.R.2
-
137
-
-
33644856456
-
Stochastic spineless expression creates the retinal mosaic for colour vision
-
Wernet, M. F., Mazzoni, E. O., Celik, A., Duncan, D. M., Duncan, I. and Desplan, C. (2006). Stochastic spineless expression creates the retinal mosaic for colour vision. Nature 440, 174-180.
-
(2006)
Nature
, vol.440
, pp. 174-180
-
-
Wernet, M.F.1
Mazzoni, E.O.2
Celik, A.3
Duncan, D.M.4
Duncan, I.5
Desplan, C.6
-
138
-
-
0031105797
-
Mathematical model of the greater operon: Inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose
-
Wong, P., Gladney, S. and Keasling, J. D. (1997). Mathematical model of the greater operon: inducer exclusion, catabolite repression, and diauxic growth on glucose and lactose. Biotech. Progress 13, 132-143.
-
(1997)
Biotech. Progress
, vol.13
, pp. 132-143
-
-
Wong, P.1
Gladney, S.2
Keasling, J.D.3
-
139
-
-
0034730329
-
Overlapping activators and repressors delimit transcriptional response to receptor tyrosine kinase signals in the Drosophila eye
-
Xu, C., Kauffmann, R. C., Zhang, J., Kladny, S. and Carthew, R. W. (2000). Overlapping activators and repressors delimit transcriptional response to receptor tyrosine kinase signals in the Drosophila eye. Cell 103, 87-97.
-
(2000)
Cell
, vol.103
, pp. 87-97
-
-
Xu, C.1
Kauffmann, R.C.2
Zhang, J.3
Kladny, S.4
Carthew, R.W.5
-
140
-
-
67650676804
-
Bistability coordinates activation of the EGFR and DPP pathways in Drosophila vein differentiation
-
Yan, S.-J., Zartman, J. J., Zhang, M., Scott, A., Shvartsman, S. Y. and Li, W. X. (2009). Bistability coordinates activation of the EGFR and DPP pathways in Drosophila vein differentiation. Mol. Syst. Biol. 5, 278.
-
(2009)
Mol. Syst. Biol.
, vol.5
, pp. 278
-
-
Yan, S.-J.1
Zartman, J.J.2
Zhang, M.3
Scott, A.4
Shvartsman, S.Y.5
Li, W.X.6
-
141
-
-
0037040407
-
Regulation of Frizzled by fat-like cadherins during planar polarity signaling in the Drosophila compound eye
-
Yang, C.-h., Axelrod, J. D. and Simon, M. A. (2002). Regulation of Frizzled by fat-like cadherins during planar polarity signaling in the Drosophila compound eye. Cell 108, 675-688.
-
(2002)
Cell
, vol.108
, pp. 675-688
-
-
Yang, C.-H.1
Axelrod, J.D.2
Simon, M.A.3
-
142
-
-
43149108161
-
A bistable Rb-E2F switch underlies the restriction point
-
Yao, G., Lee, T. J., Mori, S., Nevins, J. R. and You, L. (2008). A bistable Rb-E2F switch underlies the restriction point. Nat. Cell Biol. 10, 476-482.
-
(2008)
Nat. Cell Biol.
, vol.10
, pp. 476-482
-
-
Yao, G.1
Lee, T.J.2
Mori, S.3
Nevins, J.R.4
You, L.5
-
143
-
-
76749109939
-
Sterile alpha motif domain-mediated self-association plays an essential role in modulating the activity of the Drosophila ETS family transcriptional repressor Yan
-
Zhang, J., Graham, T. G. W., Vivekanand, P., Cote, L., Cetera, M. and Rebay, I. (2010). Sterile alpha motif domain-mediated self-association plays an essential role in modulating the activity of the Drosophila ETS family transcriptional repressor Yan. Mol. Cell. Biol. 30, 1158-1170.
-
(2010)
Mol. Cell. Biol.
, vol.30
, pp. 1158-1170
-
-
Zhang, J.1
Graham, T.G.W.2
Vivekanand, P.3
Cote, L.4
Cetera, M.5
Rebay, I.6
-
144
-
-
0029145518
-
Frizzled regulates mirror-symmetric pattern formation in the Drosophila eye
-
Zheng, L., Zhang, J. and Carthew, R. W. (1995). frizzled regulates mirror-symmetric pattern formation in the Drosophila eye. Development 121, 3045-3055.
-
(1995)
Development
, vol.121
, pp. 3045-3055
-
-
Zheng, L.1
Zhang, J.2
Carthew, R.W.3
|