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Volumn 32, Issue 2, 2010, Pages 152-161

Integrating Genomic Signatures for Immunologic Discovery

Author keywords

[No Author keywords available]

Indexed keywords

B LYMPHOCYTE INDUCED MATURATION PROTEIN 1; BCG VACCINE; CD4 ANTIGEN; CD69 ANTIGEN; CD8 ANTIGEN; CHEMOKINE RECEPTOR CCR7; GEFITINIB; HEPATITIS C VACCINE; HUMAN IMMUNODEFICIENCY VIRUS VACCINE; INFLUENZA VACCINE; INTERLEUKIN 2 RECEPTOR ALPHA; INTERLEUKIN 7 RECEPTOR; L SELECTIN; MAMMALIAN TARGET OF RAPAMYCIN; PROTEIN KINASE SYK; RAPAMYCIN; RNA POLYMERASE II; TUMOR NECROSIS FACTOR RECEPTOR ASSOCIATED FACTOR 6; X BOX BINDING PROTEIN 1; YELLOW FEVER VACCINE;

EID: 76949094687     PISSN: 10747613     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.immuni.2010.02.001     Document Type: Review
Times cited : (50)

References (82)
  • 9
    • 38449083151 scopus 로고    scopus 로고
    • Transcriptional profiling of antigen-dependent murine B cell differentiation and memory formation
    • Bhattacharya D., Cheah M.T., Franco C.B., Hosen N., Pin C.L., Sha W.C., and Weissman I.L. Transcriptional profiling of antigen-dependent murine B cell differentiation and memory formation. J. Immunol. 179 (2007) 6808-6819
    • (2007) J. Immunol. , vol.179 , pp. 6808-6819
    • Bhattacharya, D.1    Cheah, M.T.2    Franco, C.B.3    Hosen, N.4    Pin, C.L.5    Sha, W.C.6    Weissman, I.L.7
  • 10
    • 27344456836 scopus 로고    scopus 로고
    • Application of a priori established gene sets to discover biologically important differential expression in microarray data
    • Bild A., and Febbo P.G. Application of a priori established gene sets to discover biologically important differential expression in microarray data. Proc. Natl. Acad. Sci. USA 102 (2005) 15278-15279
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 15278-15279
    • Bild, A.1    Febbo, P.G.2
  • 13
    • 45549089565 scopus 로고    scopus 로고
    • The art and design of genetic screens: RNA interference
    • Boutros M., and Ahringer J. The art and design of genetic screens: RNA interference. Nat. Rev. Genet. 9 (2008) 554-566
    • (2008) Nat. Rev. Genet. , vol.9 , pp. 554-566
    • Boutros, M.1    Ahringer, J.2
  • 16
    • 55449095864 scopus 로고    scopus 로고
    • A chromatic explosion: The development and future of multiparameter flow cytometry
    • Chattopadhyay P.K., Hogerkorp C.-M., and Roederer M. A chromatic explosion: The development and future of multiparameter flow cytometry. Immunology 125 (2008) 441-449
    • (2008) Immunology , vol.125 , pp. 441-449
    • Chattopadhyay, P.K.1    Hogerkorp, C.-M.2    Roederer, M.3
  • 18
    • 29144486808 scopus 로고    scopus 로고
    • Identification of T cell-restricted genes, and signatures for different T cell responses, using a comprehensive collection of microarray datasets
    • Chtanova T., Newton R., Liu S.M., Weininger L., Young T.R., Silva D.G., Bertoni F., Rinaldi A., Chappaz S., Sallusto F., et al. Identification of T cell-restricted genes, and signatures for different T cell responses, using a comprehensive collection of microarray datasets. J. Immunol. 175 (2005) 7837-7847
    • (2005) J. Immunol. , vol.175 , pp. 7837-7847
    • Chtanova, T.1    Newton, R.2    Liu, S.M.3    Weininger, L.4    Young, T.R.5    Silva, D.G.6    Bertoni, F.7    Rinaldi, A.8    Chappaz, S.9    Sallusto, F.10
  • 31
    • 17244367884 scopus 로고    scopus 로고
    • Memory T cells have gene expression patterns intermediate between naive and effector
    • Holmes S., He M., Xu T., and Lee P.P. Memory T cells have gene expression patterns intermediate between naive and effector. Proc. Natl. Acad. Sci. USA 102 (2005) 5519-5523
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 5519-5523
    • Holmes, S.1    He, M.2    Xu, T.3    Lee, P.P.4
  • 32
    • 58549112996 scopus 로고    scopus 로고
    • Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists
    • Huang W., Sherman B.T., and Lempicki R.A. Bioinformatics enrichment tools: Paths toward the comprehensive functional analysis of large gene lists. Nucleic Acids Res. 37 (2009) 1-13
    • (2009) Nucleic Acids Res. , vol.37 , pp. 1-13
    • Huang, W.1    Sherman, B.T.2    Lempicki, R.A.3
  • 35
    • 34548683483 scopus 로고    scopus 로고
    • + T cell differentiation during viral infection
    • + T cell differentiation during viral infection. Immunity 27 (2007) 393-405
    • (2007) Immunity , vol.27 , pp. 393-405
    • Kaech, S.M.1    Wherry, E.J.2
  • 36
    • 0037074012 scopus 로고    scopus 로고
    • Molecular and functional profiling of memory CD8 T cell differentiation
    • Kaech S.M., Hemby S., Kersh E., and Ahmed R. Molecular and functional profiling of memory CD8 T cell differentiation. Cell 111 (2002) 837-851
    • (2002) Cell , vol.111 , pp. 837-851
    • Kaech, S.M.1    Hemby, S.2    Kersh, E.3    Ahmed, R.4
  • 37
    • 0347382593 scopus 로고    scopus 로고
    • Selective expression of the interleukin 7 receptor identifies effector CD8 T cells that give rise to long-lived memory cells
    • Kaech S.M., Tan J.T., Wherry E.J., Konieczny B.T., Surh C.D., and Ahmed R. Selective expression of the interleukin 7 receptor identifies effector CD8 T cells that give rise to long-lived memory cells. Nat. Immunol. 4 (2003) 1191-1198
    • (2003) Nat. Immunol. , vol.4 , pp. 1191-1198
    • Kaech, S.M.1    Tan, J.T.2    Wherry, E.J.3    Konieczny, B.T.4    Surh, C.D.5    Ahmed, R.6
  • 39
    • 4644325602 scopus 로고    scopus 로고
    • Unique gene expression program of human germinal center T helper cells
    • Kim C.H., Lim H.W., Kim J.R., Rott L., Hillsamer P., and Butcher E.C. Unique gene expression program of human germinal center T helper cells. Blood 104 (2004) 1952-1960
    • (2004) Blood , vol.104 , pp. 1952-1960
    • Kim, C.H.1    Lim, H.W.2    Kim, J.R.3    Rott, L.4    Hillsamer, P.5    Butcher, E.C.6
  • 47
    • 33644746220 scopus 로고    scopus 로고
    • Memory T and memory B cells share a transcriptional program of self-renewal with long-term hematopoietic stem cells
    • Luckey C.J., Bhattacharya D., Goldrath A.W., Weissman I.L., Benoist C., and Mathis D. Memory T and memory B cells share a transcriptional program of self-renewal with long-term hematopoietic stem cells. Proc. Natl. Acad. Sci. USA 103 (2006) 3304-3309
    • (2006) Proc. Natl. Acad. Sci. USA , vol.103 , pp. 3304-3309
    • Luckey, C.J.1    Bhattacharya, D.2    Goldrath, A.W.3    Weissman, I.L.4    Benoist, C.5    Mathis, D.6
  • 49
    • 1342303482 scopus 로고    scopus 로고
    • Of mice and not men: Differences between mouse and human immunology
    • Mestas J., and Hughes C.C. Of mice and not men: Differences between mouse and human immunology. J. Immunol. 172 (2004) 2731-2738
    • (2004) J. Immunol. , vol.172 , pp. 2731-2738
    • Mestas, J.1    Hughes, C.C.2
  • 52
    • 34447555782 scopus 로고    scopus 로고
    • Mining gene expression profiles: expression signatures as cancer phenotypes
    • Nevins J.R., and Potti A. Mining gene expression profiles: expression signatures as cancer phenotypes. Nat. Rev. Genet. 8 (2007) 601-609
    • (2007) Nat. Rev. Genet. , vol.8 , pp. 601-609
    • Nevins, J.R.1    Potti, A.2
  • 55
    • 70349451542 scopus 로고    scopus 로고
    • Learning immunology from the yellow fever vaccine: Innate immunity to systems vaccinology
    • Pulendran B. Learning immunology from the yellow fever vaccine: Innate immunity to systems vaccinology. Nat. Rev. Immunol. 9 (2009) 741-747
    • (2009) Nat. Rev. Immunol. , vol.9 , pp. 741-747
    • Pulendran, B.1
  • 59
    • 0033554726 scopus 로고    scopus 로고
    • Two subsets of memory T lymphocytes with distinct homing potentials and effector functions
    • Sallusto F., Lenig D., Förster R., Lipp M., and Lanzavecchia A. Two subsets of memory T lymphocytes with distinct homing potentials and effector functions. Nature 401 (1999) 708-712
    • (1999) Nature , vol.401 , pp. 708-712
    • Sallusto, F.1    Lenig, D.2    Förster, R.3    Lipp, M.4    Lanzavecchia, A.5
  • 60
    • 2142730100 scopus 로고    scopus 로고
    • Central memory and effector memory T cell subsets: function, generation, and maintenance
    • Sallusto F., Geginat J., and Lanzavecchia A. Central memory and effector memory T cell subsets: function, generation, and maintenance. Annu. Rev. Immunol. 22 (2004) 745-763
    • (2004) Annu. Rev. Immunol. , vol.22 , pp. 745-763
    • Sallusto, F.1    Geginat, J.2    Lanzavecchia, A.3
  • 61
    • 73349092693 scopus 로고    scopus 로고
    • Deconvoluting the 'omics' for organ transplantation
    • Sarwal M.M. Deconvoluting the 'omics' for organ transplantation. Curr. Opin. Organ Transplant. 14 (2009) 544-551
    • (2009) Curr. Opin. Organ Transplant. , vol.14 , pp. 544-551
    • Sarwal, M.M.1
  • 62
    • 0028806048 scopus 로고
    • Quantitative monitoring of gene expression patterns with a complementary DNA microarray
    • Schena M., Shalon D., Davis R.W., and Brown P.O. Quantitative monitoring of gene expression patterns with a complementary DNA microarray. Science 270 (1995) 467-470
    • (1995) Science , vol.270 , pp. 467-470
    • Schena, M.1    Shalon, D.2    Davis, R.W.3    Brown, P.O.4
  • 64
    • 0033680860 scopus 로고    scopus 로고
    • BCL-6 represses genes that function in lymphocyte differentiation, inflammation, and cell cycle control
    • Shaffer A.L., Yu X., He Y., Boldrick J., Chan E.P., and Staudt L.M. BCL-6 represses genes that function in lymphocyte differentiation, inflammation, and cell cycle control. Immunity 13 (2000) 199-212
    • (2000) Immunity , vol.13 , pp. 199-212
    • Shaffer, A.L.1    Yu, X.2    He, Y.3    Boldrick, J.4    Chan, E.P.5    Staudt, L.M.6
  • 68
    • 1442335997 scopus 로고    scopus 로고
    • Gene expression-based high-throughput screening(GE-HTS) and application to leukemia differentiation
    • Stegmaier K., Ross K.N., Colavito S.A., O'Malley S., Stockwell B.R., and Golub T.R. Gene expression-based high-throughput screening(GE-HTS) and application to leukemia differentiation. Nat. Genet. 36 (2004) 257-263
    • (2004) Nat. Genet. , vol.36 , pp. 257-263
    • Stegmaier, K.1    Ross, K.N.2    Colavito, S.A.3    O'Malley, S.4    Stockwell, B.R.5    Golub, T.R.6
  • 75
    • 69449102464 scopus 로고    scopus 로고
    • Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes
    • Wang Z., Zang C., Cui K., Schones D.E., Barski A., Peng W., and Zhao K. Genome-wide mapping of HATs and HDACs reveals distinct functions in active and inactive genes. Cell 138 (2009) 1019-1031
    • (2009) Cell , vol.138 , pp. 1019-1031
    • Wang, Z.1    Zang, C.2    Cui, K.3    Schones, D.E.4    Barski, A.5    Peng, W.6    Zhao, K.7
  • 79
    • 27144467425 scopus 로고    scopus 로고
    • Molecular signatures distinguish human central memory from effector memory CD8 T cell subsets
    • Willinger T., Freeman T., Hasegawa H., McMichael A.J., and Callan M.F. Molecular signatures distinguish human central memory from effector memory CD8 T cell subsets. J. Immunol. 175 (2005) 5895-5903
    • (2005) J. Immunol. , vol.175 , pp. 5895-5903
    • Willinger, T.1    Freeman, T.2    Hasegawa, H.3    McMichael, A.J.4    Callan, M.F.5
  • 81
    • 27744484754 scopus 로고    scopus 로고
    • CD73 and Ly-6A/E distinguish in vivo primed but uncommitted mouse CD4 T cells from type 1 or type 2 effector cells
    • Yang L., Kobie J.J., and Mosmann T.R. CD73 and Ly-6A/E distinguish in vivo primed but uncommitted mouse CD4 T cells from type 1 or type 2 effector cells. J. Immunol. 175 (2005) 6458-6464
    • (2005) J. Immunol. , vol.175 , pp. 6458-6464
    • Yang, L.1    Kobie, J.J.2    Mosmann, T.R.3
  • 82
    • 34247277666 scopus 로고    scopus 로고
    • Foxp3 in control of the regulatory T cell lineage
    • Zheng Y., and Rudensky A.Y. Foxp3 in control of the regulatory T cell lineage. Nat. Immunol. 8 (2007) 457-462
    • (2007) Nat. Immunol. , vol.8 , pp. 457-462
    • Zheng, Y.1    Rudensky, A.Y.2


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