메뉴 건너뛰기




Volumn 20, Issue 4, 2010, Pages

The Genetics of Human Adaptation: Hard Sweeps, Soft Sweeps, and Polygenic Adaptation

Author keywords

[No Author keywords available]

Indexed keywords

ADAPTATION; GENETIC SELECTION; GENETICS; HUMAN; MULTIFACTORIAL INHERITANCE; POPULATION GENETICS; REVIEW;

EID: 76749097550     PISSN: 09609822     EISSN: None     Source Type: Journal    
DOI: 10.1016/j.cub.2009.11.055     Document Type: Review
Times cited : (664)

References (76)
  • 1
    • 65149103048 scopus 로고    scopus 로고
    • Constructing genomic maps of positive selection in humans: where do we go from here?
    • Akey J.M. Constructing genomic maps of positive selection in humans: where do we go from here?. Genome Res. 19 (2009) 711-722
    • (2009) Genome Res. , vol.19 , pp. 711-722
    • Akey, J.M.1
  • 2
    • 33746237567 scopus 로고    scopus 로고
    • Genomic insights into positive selection
    • Biswas S., and Akey J.M. Genomic insights into positive selection. Trends Genet. 22 (2006) 437-446
    • (2006) Trends Genet. , vol.22 , pp. 437-446
    • Biswas, S.1    Akey, J.M.2
  • 4
    • 70350069921 scopus 로고    scopus 로고
    • Spatial patterns of variation due to natural selection in humans
    • Novembre J., and Di Rienzo A. Spatial patterns of variation due to natural selection in humans. Nat. Rev. Genet. 10 (2009) 745-755
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 745-755
    • Novembre, J.1    Di Rienzo, A.2
  • 7
    • 0028580229 scopus 로고
    • Morphological adaptation to climate in modern and fossil hominids
    • Ruff C. Morphological adaptation to climate in modern and fossil hominids. Am. J. Phys. Anthropol. 37 (1994) 65-107
    • (1994) Am. J. Phys. Anthropol. , vol.37 , pp. 65-107
    • Ruff, C.1
  • 8
    • 62849111129 scopus 로고    scopus 로고
    • Evolution of the human pygmy phenotype
    • Perry G.H., and Dominy N.J. Evolution of the human pygmy phenotype. Trends Ecol. Evol. 24 (2009) 218-225
    • (2009) Trends Ecol. Evol. , vol.24 , pp. 218-225
    • Perry, G.H.1    Dominy, N.J.2
  • 9
    • 0034466057 scopus 로고    scopus 로고
    • Tibetan and Andean contrasts in adaptation to high-altitude hypoxia
    • Beall C.M. Tibetan and Andean contrasts in adaptation to high-altitude hypoxia. Adv. Exp. Med. Biol. 475 (2000) 63-74
    • (2000) Adv. Exp. Med. Biol. , vol.475 , pp. 63-74
    • Beall, C.M.1
  • 10
    • 0034913630 scopus 로고    scopus 로고
    • Human genetic adaptation to high altitude
    • Moore L.G. Human genetic adaptation to high altitude. High Altitude Med. Biol. 2 (2001) 257-279
    • (2001) High Altitude Med. Biol. , vol.2 , pp. 257-279
    • Moore, L.G.1
  • 11
    • 34548694007 scopus 로고    scopus 로고
    • Population genetic aspects and phenotypic plasticity of ventilatory responses in high altitude natives
    • Brutsaert T.D. Population genetic aspects and phenotypic plasticity of ventilatory responses in high altitude natives. Resp. Physiol. Neurobiol. 158 (2007) 151-160
    • (2007) Resp. Physiol. Neurobiol. , vol.158 , pp. 151-160
    • Brutsaert, T.D.1
  • 12
    • 70350714142 scopus 로고    scopus 로고
    • Evolutionary adaptation to high altitude: a view from in utero
    • Julian C.G., Wilson M.J., and Moore L.G. Evolutionary adaptation to high altitude: a view from in utero. Am. J. Hum. Biol. 21 (2009) 614-622
    • (2009) Am. J. Hum. Biol. , vol.21 , pp. 614-622
    • Julian, C.G.1    Wilson, M.J.2    Moore, L.G.3
  • 13
    • 0033912992 scopus 로고    scopus 로고
    • The evolution of human skin coloration
    • Jablonski N.G., and Chaplin G. The evolution of human skin coloration. J. Hum. Evol. 39 (2000) 57-106
    • (2000) J. Hum. Evol. , vol.39 , pp. 57-106
    • Jablonski, N.G.1    Chaplin, G.2
  • 14
    • 38449113569 scopus 로고    scopus 로고
    • Human pigmentation variation: evolution, genetic basis, and implications for public health
    • Parra E.J. Human pigmentation variation: evolution, genetic basis, and implications for public health. Am. J. Phys. Anthropol. 45 Suppl (2007) 85-105
    • (2007) Am. J. Phys. Anthropol. , vol.45 , Issue.SUPPL , pp. 85-105
    • Parra, E.J.1
  • 16
    • 36849071407 scopus 로고    scopus 로고
    • Cis-regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans
    • Miller C., Beleza S., Pollen A., Schluter D., Kittles R., Shriver M.D., and Kingsley D.M. Cis-regulatory changes in Kit ligand expression and parallel evolution of pigmentation in sticklebacks and humans. Cell 131 (2007) 1179-1189
    • (2007) Cell , vol.131 , pp. 1179-1189
    • Miller, C.1    Beleza, S.2    Pollen, A.3    Schluter, D.4    Kittles, R.5    Shriver, M.D.6    Kingsley, D.M.7
  • 23
    • 0033911892 scopus 로고    scopus 로고
    • Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus
    • Hamblin M., and Di Rienzo A. Detection of the signature of natural selection in humans: evidence from the Duffy blood group locus. Am. J. Hum. Genet. 66 (2000) 1669-1679
    • (2000) Am. J. Hum. Genet. , vol.66 , pp. 1669-1679
    • Hamblin, M.1    Di Rienzo, A.2
  • 28
    • 59249100200 scopus 로고    scopus 로고
    • Pervasive hitchhiking at coding and regulatory sites in humans
    • Cai J.J., Macpherson J.M., Sella G., and Petrov D.A. Pervasive hitchhiking at coding and regulatory sites in humans. PLoS Genet. 5 (2009) e1000336
    • (2009) PLoS Genet. , vol.5
    • Cai, J.J.1    Macpherson, J.M.2    Sella, G.3    Petrov, D.A.4
  • 29
    • 67149096366 scopus 로고    scopus 로고
    • Widespread genomic signatures of natural selection in hominid evolution
    • McVicker G., Gordon D., Davis C., and Green P. Widespread genomic signatures of natural selection in hominid evolution. PLoS Genet. 5 (2009) e1000471
    • (2009) PLoS Genet. , vol.5
    • McVicker, G.1    Gordon, D.2    Davis, C.3    Green, P.4
  • 30
    • 39749136156 scopus 로고    scopus 로고
    • Natural selection has driven population differentiation in modern humans
    • Barreiro L.B., Laval G., Quach H., Patin E., and Quintana-Murci L. Natural selection has driven population differentiation in modern humans. Nat. Genet. 40 (2008) 340-345
    • (2008) Nat. Genet. , vol.40 , pp. 340-345
    • Barreiro, L.B.1    Laval, G.2    Quach, H.3    Patin, E.4    Quintana-Murci, L.5
  • 31
    • 46449121800 scopus 로고    scopus 로고
    • Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals
    • Hellmann I., Mang Y., Gu Z., Li P., De La Vega F.M., Clark A.G., and Nielsen R. Population genetic analysis of shotgun assemblies of genomic sequences from multiple individuals. Genome Res. 18 (2008) 1020-1029
    • (2008) Genome Res. , vol.18 , pp. 1020-1029
    • Hellmann, I.1    Mang, Y.2    Gu, Z.3    Li, P.4    De La Vega, F.M.5    Clark, A.G.6    Nielsen, R.7
  • 32
    • 0027305597 scopus 로고
    • The effect of deleterious mutations on neutral molecular variation
    • Charlesworth B., Morgan M.T., and Charlesworth D. The effect of deleterious mutations on neutral molecular variation. Genetics 134 (1993) 1289-1303
    • (1993) Genetics , vol.134 , pp. 1289-1303
    • Charlesworth, B.1    Morgan, M.T.2    Charlesworth, D.3
  • 35
    • 33744815615 scopus 로고    scopus 로고
    • How reliable are empirical genomic scans for selective sweeps?
    • Teshima K., Coop G., and Przeworski M.F. How reliable are empirical genomic scans for selective sweeps?. Genome Res. 16 (2006) 702-712
    • (2006) Genome Res. , vol.16 , pp. 702-712
    • Teshima, K.1    Coop, G.2    Przeworski, M.F.3
  • 37
    • 35348983887 scopus 로고    scopus 로고
    • A second generation human haplotype map of over 3.1 million SNPs
    • International HapMap Consortium
    • International HapMap Consortium. A second generation human haplotype map of over 3.1 million SNPs. Nature 449 (2007) 851-861
    • (2007) Nature , vol.449 , pp. 851-861
  • 39
    • 34748819978 scopus 로고    scopus 로고
    • Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans
    • Keinan A., Mullikin J.C., Patterson N., and Reich D. Measurement of the human allele frequency spectrum demonstrates greater genetic drift in East Asians than in Europeans. Nat. Genet. 39 (2007) 1251-1255
    • (2007) Nat. Genet. , vol.39 , pp. 1251-1255
    • Keinan, A.1    Mullikin, J.C.2    Patterson, N.3    Reich, D.4
  • 40
    • 0016220238 scopus 로고
    • The hitch-hiking effect of a favourable gene
    • Maynard Smith J., and Haigh J. The hitch-hiking effect of a favourable gene. Genet. Res. 23 (1974) 23-35
    • (1974) Genet. Res. , vol.23 , pp. 23-35
    • Maynard Smith, J.1    Haigh, J.2
  • 41
    • 18844439645 scopus 로고    scopus 로고
    • Soft sweeps: molecular population genetics of adaptation from standing genetic variation
    • Hermisson J., and Pennings P.S. Soft sweeps: molecular population genetics of adaptation from standing genetic variation. Genetics 169 (2005) 2335-2352
    • (2005) Genetics , vol.169 , pp. 2335-2352
    • Hermisson, J.1    Pennings, P.S.2
  • 43
    • 39749184167 scopus 로고    scopus 로고
    • The evolution of gene regulation underlies a morphological diverence between two Drosophila sister species
    • Jeong S., Rebeiz M., Andolfatto P., Werner T., True J., and Carroll S.B. The evolution of gene regulation underlies a morphological diverence between two Drosophila sister species. Cell 132 (2008) 783-793
    • (2008) Cell , vol.132 , pp. 783-793
    • Jeong, S.1    Rebeiz, M.2    Andolfatto, P.3    Werner, T.4    True, J.5    Carroll, S.B.6
  • 44
    • 66049129672 scopus 로고    scopus 로고
    • Population genomic analysis of ALMS1 in humans reveals a surprisingly complex evolutionary history
    • Scheinfeldt L.B., Biswas S., Madeoy J., Connelly C.F., Schadt E.E., and Akey J.M. Population genomic analysis of ALMS1 in humans reveals a surprisingly complex evolutionary history. Mol. Biol. Evol. 26 (2009) 1357-1367
    • (2009) Mol. Biol. Evol. , vol.26 , pp. 1357-1367
    • Scheinfeldt, L.B.1    Biswas, S.2    Madeoy, J.3    Connelly, C.F.4    Schadt, E.E.5    Akey, J.M.6
  • 45
    • 3242714766 scopus 로고    scopus 로고
    • Pattern of polymorphism after strong artificial selection in a domestication event
    • Innan H., and Kim Y. Pattern of polymorphism after strong artificial selection in a domestication event. Proc. Nat. Acad. Sci. USA 101 (2004) 10667-10672
    • (2004) Proc. Nat. Acad. Sci. USA , vol.101 , pp. 10667-10672
    • Innan, H.1    Kim, Y.2
  • 46
    • 0035109378 scopus 로고    scopus 로고
    • Haldane's sieve and adaptation from the standing genetic variation
    • Orr H.A., and Betancourt A.J. Haldane's sieve and adaptation from the standing genetic variation. Genetics 157 (2001) 875-884
    • (2001) Genetics , vol.157 , pp. 875-884
    • Orr, H.A.1    Betancourt, A.J.2
  • 47
    • 33646592536 scopus 로고    scopus 로고
    • Soft sweeps II-molecular population genetics of adaptation from recurrent mutation or migration
    • Pennings P., and Hermisson J. Soft sweeps II-molecular population genetics of adaptation from recurrent mutation or migration. Mol. Biol. Evol. 23 (2006) 1076-1084
    • (2006) Mol. Biol. Evol. , vol.23 , pp. 1076-1084
    • Pennings, P.1    Hermisson, J.2
  • 48
    • 28644440530 scopus 로고    scopus 로고
    • The signature of positive selection on standing genetic variation
    • Przeworski M., Coop G., and Wall J. The signature of positive selection on standing genetic variation. Evolution 59 (2005) 2312-2323
    • (2005) Evolution , vol.59 , pp. 2312-2323
    • Przeworski, M.1    Coop, G.2    Wall, J.3
  • 49
    • 33845971545 scopus 로고    scopus 로고
    • Soft sweeps III: the signature of positive selection from recurrent mutation
    • Pennings P.S., and Hermisson J. Soft sweeps III: the signature of positive selection from recurrent mutation. PLoS Genet. 2 (2006) e186
    • (2006) PLoS Genet. , vol.2
    • Pennings, P.S.1    Hermisson, J.2
  • 50
    • 60349093708 scopus 로고    scopus 로고
    • Fundamental concepts in genetics: effective population size and patterns of molecular evolution and variation
    • Charlesworth B. Fundamental concepts in genetics: effective population size and patterns of molecular evolution and variation. Nat. Rev. Genet. 10 (2009) 195-205
    • (2009) Nat. Rev. Genet. , vol.10 , pp. 195-205
    • Charlesworth, B.1
  • 52
    • 33747173377 scopus 로고    scopus 로고
    • Mutation, selection and the future of human evolution
    • Reed F.A., and Aquadro C.F. Mutation, selection and the future of human evolution. Trends Genet. 22 (2006) 479-484
    • (2006) Trends Genet. , vol.22 , pp. 479-484
    • Reed, F.A.1    Aquadro, C.F.2
  • 53
    • 0030994606 scopus 로고    scopus 로고
    • The probability of fixation in populations of changing size
    • Otto S.P., and Whitlock M.C. The probability of fixation in populations of changing size. Genetics 146 (1997) 723-733
    • (1997) Genetics , vol.146 , pp. 723-733
    • Otto, S.P.1    Whitlock, M.C.2
  • 54
    • 29444451610 scopus 로고    scopus 로고
    • Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes
    • Voight B.F., Adams A.M., Frisse L.A., Qian Y., Hudson R.R., and Di Rienzo A. Interrogating multiple aspects of variation in a full resequencing data set to infer human population size changes. Proc. Natl. Acad. Sci. USA 102 (2005) 18508-18513
    • (2005) Proc. Natl. Acad. Sci. USA , vol.102 , pp. 18508-18513
    • Voight, B.F.1    Adams, A.M.2    Frisse, L.A.3    Qian, Y.4    Hudson, R.R.5    Di Rienzo, A.6
  • 56
    • 0036245475 scopus 로고    scopus 로고
    • Understanding quantitative genetic variation
    • Barton N.H., and Keightley P.D. Understanding quantitative genetic variation. Nat. Rev. Genet. 3 (2002) 11-21
    • (2002) Nat. Rev. Genet. , vol.3 , pp. 11-21
    • Barton, N.H.1    Keightley, P.D.2
  • 57
    • 0028978922 scopus 로고
    • Predicting microevolutionary responses to directional selection on heritable variation
    • Grant P.R., and Grant B.R. Predicting microevolutionary responses to directional selection on heritable variation. Evolution 49 (1995) 241-251
    • (1995) Evolution , vol.49 , pp. 241-251
    • Grant, P.R.1    Grant, B.R.2
  • 59
    • 0001278933 scopus 로고
    • The effect of selection on natural variability
    • Bulmer M. The effect of selection on natural variability. Am. Nat. 105 (1971) 314-331
    • (1971) Am. Nat. , vol.105 , pp. 314-331
    • Bulmer, M.1
  • 60
    • 0002397928 scopus 로고
    • Dynamics of polygenic characters under selection
    • Turelli M., and Barton N.H. Dynamics of polygenic characters under selection. Theor. Popul. Biol. 38 (1990) 1-57
    • (1990) Theor. Popul. Biol. , vol.38 , pp. 1-57
    • Turelli, M.1    Barton, N.H.2
  • 61
    • 0027973280 scopus 로고
    • Genetic and statistical analyses of strong selection on polygenic traits: what, me normal?
    • Turelli M., and Barton N. Genetic and statistical analyses of strong selection on polygenic traits: what, me normal?. Genetics 138 (1994) 913-941
    • (1994) Genetics , vol.138 , pp. 913-941
    • Turelli, M.1    Barton, N.2
  • 62
    • 59449107920 scopus 로고    scopus 로고
    • Selective sweep at a quantitative trait locus in the presence of background genetic variation
    • Chevin L.M., and Hospital F. Selective sweep at a quantitative trait locus in the presence of background genetic variation. Genetics 180 (2008) 1645-1660
    • (2008) Genetics , vol.180 , pp. 1645-1660
    • Chevin, L.M.1    Hospital, F.2
  • 63
    • 84966168715 scopus 로고
    • The response to selection on major and minor mutations affecting a metrical trait
    • Lande R. The response to selection on major and minor mutations affecting a metrical trait. Heredity 50 (1983) 47-65
    • (1983) Heredity , vol.50 , pp. 47-65
    • Lande, R.1
  • 64
    • 84971185409 scopus 로고
    • On the correlation between relatives on the supposition of Mendelian inheritance
    • Fisher R.A. On the correlation between relatives on the supposition of Mendelian inheritance. Trans. R. Soc. Edinburgh 52 (1918) 399-433
    • (1918) Trans. R. Soc. Edinburgh , vol.52 , pp. 399-433
    • Fisher, R.A.1
  • 71
    • 0024423459 scopus 로고
    • The divergence of a polygenic system subject to stabilizing selection, mutation and drift
    • Barton N.H. The divergence of a polygenic system subject to stabilizing selection, mutation and drift. Genet. Res. 54 (1989) 59-77
    • (1989) Genet. Res. , vol.54 , pp. 59-77
    • Barton, N.H.1
  • 73
    • 33845645529 scopus 로고    scopus 로고
    • Identifying genes underlying skin pigmentation differences among human populations
    • Myles S., Somel M., Tang K., Kelso J., and Stoneking M. Identifying genes underlying skin pigmentation differences among human populations. Hum. Genet. 120 (2007) 613-621
    • (2007) Hum. Genet. , vol.120 , pp. 613-621
    • Myles, S.1    Somel, M.2    Tang, K.3    Kelso, J.4    Stoneking, M.5
  • 74
    • 0141789995 scopus 로고    scopus 로고
    • Orr's quantitative trait loci sign test under conditions of trait ascertainment
    • Anderson E.C., and Slatkin M. Orr's quantitative trait loci sign test under conditions of trait ascertainment. Genetics 165 (2003) 445-446
    • (2003) Genetics , vol.165 , pp. 445-446
    • Anderson, E.C.1    Slatkin, M.2
  • 75
    • 0031927739 scopus 로고    scopus 로고
    • Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data
    • Orr H.A. Testing natural selection vs. genetic drift in phenotypic evolution using quantitative trait locus data. Genetics 149 (1998) 2099-2104
    • (1998) Genetics , vol.149 , pp. 2099-2104
    • Orr, H.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.