-
1
-
-
4444358439
-
Bmp4 and morphological variation of beaks in Darwin's finches
-
Abzhanov, A., Protas, M., Grant, B.R., Grant, P.R., and Tabin, C.J. 2004. Bmp4 and morphological variation of beaks in Darwin's finches. Science 305: 1462-1465.
-
(2004)
Science
, vol.305
, pp. 1462-1465
-
-
Abzhanov, A.1
Protas, M.2
Grant, B.R.3
Grant, P.R.4
Tabin, C.J.5
-
2
-
-
10844238913
-
Maximum-likelihood estimation of demographic parameters using the frequency spectrum of unlinked single-nucleotide polymorphisms
-
Adams, A.M. and Hudson, R.R. 2004. Maximum-likelihood estimation of demographic parameters using the frequency spectrum of unlinked single-nucleotide polymorphisms. Genetics 168: 1699-1712.
-
(2004)
Genetics
, vol.168
, pp. 1699-1712
-
-
Adams, A.M.1
Hudson, R.R.2
-
3
-
-
0036911353
-
Interrogating a high-density SNP map for signatures of natural selection
-
Akey, J.M., Zhang, G., Zhang, K., Jin, L., and Shriver, M.D. 2002. Interrogating a high-density SNP map for signatures of natural selection. Genome Res. 12: 1805-1814.
-
(2002)
Genome Res.
, vol.12
, pp. 1805-1814
-
-
Akey, J.M.1
Zhang, G.2
Zhang, K.3
Jin, L.4
Shriver, M.D.5
-
4
-
-
8844227502
-
Population history and natural selection shape patterns of genetic variation in 132 genes
-
Akey, J.M., Eberle, M.A., Rieder, M.J., Carlson, C.S., Shriver, M.D., Nickerson, D.A., and Kruglyak, L. 2004. Population history and natural selection shape patterns of genetic variation in 132 genes. PLoS Biol. 2: e286.
-
(2004)
PLoS Biol.
, vol.2
-
-
Akey, J.M.1
Eberle, M.A.2
Rieder, M.J.3
Carlson, C.S.4
Shriver, M.D.5
Nickerson, D.A.6
Kruglyak, L.7
-
5
-
-
23044509495
-
Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila
-
Aminetzach, Y.T., Macpherson, J.M., and Petrov, D.A. 2005. Pesticide resistance via transposition-mediated adaptive gene truncation in Drosophila. Science 309: 764-767.
-
(2005)
Science
, vol.309
, pp. 764-767
-
-
Aminetzach, Y.T.1
Macpherson, J.M.2
Petrov, D.A.3
-
6
-
-
0033828706
-
A genome-wide departure from the standard neutral model in natural populations of Drosophila
-
Andolfatto, P. and Przeworski, M. 2000. A genome-wide departure from the standard neutral model in natural populations of Drosophila. Genetics 156: 257-268.
-
(2000)
Genetics
, vol.156
, pp. 257-268
-
-
Andolfatto, P.1
Przeworski, M.2
-
7
-
-
0035546072
-
Genome-wide variation in the human and fruitfly: A comparison
-
Aquadro, C.F., DuMont, V.B., and Reed, F.A. 2001. Genome-wide variation in the human and fruitfly: A comparison. Curr. Opin. Genet. Dev. 11: 627-634.
-
(2001)
Curr. Opin. Genet. Dev.
, vol.11
, pp. 627-634
-
-
Aquadro, C.F.1
DuMont, V.B.2
Reed, F.A.3
-
8
-
-
0031673084
-
The effect of hitch-hiking on neutral genealogies
-
Barton, N.H. 1998. The effect of hitch-hiking on neutral genealogies. Genet. Res. 72: 123-133.
-
(1998)
Genet. Res.
, vol.72
, pp. 123-133
-
-
Barton, N.H.1
-
9
-
-
2442677652
-
Genetic signatures of strong recent positive selection at the lactase gene
-
Bersaglieri, T., Sabeti, P.C., Patterson, N., Vanderploeg, T., Schaffner, S.F., Drake, J.A., Rhodes, M., Reich, D.E., and Hirschhorn, J.N. 2004. Genetic signatures of strong recent positive selection at the lactase gene. Am. J. Hum. Genet. 74: 1111-1120.
-
(2004)
Am. J. Hum. Genet.
, vol.74
, pp. 1111-1120
-
-
Bersaglieri, T.1
Sabeti, P.C.2
Patterson, N.3
Vanderploeg, T.4
Schaffner, S.F.5
Drake, J.A.6
Rhodes, M.7
Reich, D.E.8
Hirschhorn, J.N.9
-
10
-
-
0029036829
-
The hitchhiking effect on the site frequency spectrum of DNA polymorphisms
-
Braverman, J.M., Hudson, R.R., Kaplan, N.L., Langley, C.H., and Stephan, W. 1995. The hitchhiking effect on the site frequency spectrum of DNA polymorphisms. Genetics 140: 783-796.
-
(1995)
Genetics
, vol.140
, pp. 783-796
-
-
Braverman, J.M.1
Hudson, R.R.2
Kaplan, N.L.3
Langley, C.H.4
Stephan, W.5
-
11
-
-
27144539145
-
Natural selection on protein-coding genes in the human genome
-
Bustamante, C.D., Fledel-Alon, A., Williamson, S., Nielsen, R., Hubisz, M.T., Glanowski, S., Tanenbaum, D.M., White, T.J., Sninsky, J.J., Hernandez, R.D., et al. 2005. Natural selection on protein-coding genes in the human genome. Nature 437: 1153-1157.
-
(2005)
Nature
, vol.437
, pp. 1153-1157
-
-
Bustamante, C.D.1
Fledel-Alon, A.2
Williamson, S.3
Nielsen, R.4
Hubisz, M.T.5
Glanowski, S.6
Tanenbaum, D.M.7
White, T.J.8
Sninsky, J.J.9
Hernandez, R.D.10
-
12
-
-
27544482154
-
Genomic regions exhibiting positive selection identified from dense genotype data
-
Carlson, C.S., Thomas, D.J., Eberle, M.A., Swanson, J.E., Livingston, R.J., Rieder, M.J., and Nickerson, D.A. 2005. Genomic regions exhibiting positive selection identified from dense genotype data. Genome Res. 15: 1553-1565.
-
(2005)
Genome Res.
, vol.15
, pp. 1553-1565
-
-
Carlson, C.S.1
Thomas, D.J.2
Eberle, M.A.3
Swanson, J.E.4
Livingston, R.J.5
Rieder, M.J.6
Nickerson, D.A.7
-
13
-
-
0028064961
-
The relationship between genetic and physical distances in the cloned a1-sh2 interval of the Zea mays L. genome
-
Civardi, L., Xia, Y., Edwards, K.J., Schnable, P.S., and Nikolau, B.J. 1994. The relationship between genetic and physical distances in the cloned a1-sh2 interval of the Zea mays L. genome. Proc. Natl. Acad. Sci. 91: 8268-8272.
-
(1994)
Proc. Natl. Acad. Sci.
, vol.91
, pp. 8268-8272
-
-
Civardi, L.1
Xia, Y.2
Edwards, K.J.3
Schnable, P.S.4
Nikolau, B.J.5
-
14
-
-
0346243805
-
Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios
-
Clark, A.G., Glanowski, S., Nielsen, R., Thomas, P.D., Kejariwal, A., Todd, M.A., Tanenbaum, D.M., Civello, D., Lu, F., Murphy, B., et al. 2003. Inferring nonneutral evolution from human-chimp-mouse orthologous gene trios. Science 302: 1960-1963.
-
(2003)
Science
, vol.302
, pp. 1960-1963
-
-
Clark, A.G.1
Glanowski, S.2
Nielsen, R.3
Thomas, P.D.4
Kejariwal, A.5
Todd, M.A.6
Tanenbaum, D.M.7
Civello, D.8
Lu, F.9
Murphy, B.10
-
15
-
-
20144371089
-
Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles
-
Colosimo, P.F., Hosemann, K.E., Balabhadra, S., Villarreal, G., Dickson, M., Grimwood, J., Schmutz, J., Myers, R.M., Schluter, D., and Kingsley, D.M. 2005. Widespread parallel evolution in sticklebacks by repeated fixation of Ectodysplasin alleles. Science 307: 1928-1933.
-
(2005)
Science
, vol.307
, pp. 1928-1933
-
-
Colosimo, P.F.1
Hosemann, K.E.2
Balabhadra, S.3
Villarreal, G.4
Dickson, M.5
Grimwood, J.6
Schmutz, J.7
Myers, R.M.8
Schluter, D.9
Kingsley, D.M.10
-
16
-
-
31544435449
-
Multiple signatures of positive selection downstream of Notch on the X chromosome in Drosophila melanogaster
-
DuMont, V.B. and Aquadro, C.F. 2005. Multiple signatures of positive selection downstream of Notch on the X chromosome in Drosophila melanogaster. Genetics 171: 639-653.
-
(2005)
Genetics
, vol.171
, pp. 639-653
-
-
DuMont, V.B.1
Aquadro, C.F.2
-
17
-
-
0019255001
-
Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background
-
Dykhuisen, D. and Hartl, D.L. 1980. Selective neutrality of 6PGD allozymes in E. coli and the effects of genetic background. Genetics 96: 801-817.
-
(1980)
Genetics
, vol.96
, pp. 801-817
-
-
Dykhuisen, D.1
Hartl, D.L.2
-
18
-
-
0032970601
-
A human population bottleneck can account for the discordance between patterns of mitochondrial versus nuclear DNA variation
-
Fay, J.C. and Wu, C.I. 1999. A human population bottleneck can account for the discordance between patterns of mitochondrial versus nuclear DNA variation. Mol. Biol. Evol. 16: 1003-1005.
-
(1999)
Mol. Biol. Evol.
, vol.16
, pp. 1003-1005
-
-
Fay, J.C.1
Wu, C.I.2
-
19
-
-
0033911640
-
Hitchhiking under positive Darwinian selection
-
_. 2000. Hitchhiking under positive Darwinian selection. Genetics 155: 1405-1413.
-
(2000)
Genetics
, vol.155
, pp. 1405-1413
-
-
-
20
-
-
0034835229
-
Gene conversion and different population history may explain the contrast between polymorphism and linkage disequilibrium levels
-
Frisse, L., Hudson, R.R., Bartoszewicz, A., Wall, J., Donfack, J., and Di Rienzo, A. 2001. Gene conversion and different population history may explain the contrast between polymorphism and linkage disequilibrium levels. Am. J. Hum. Genet. 69: 831-843.
-
(2001)
Am. J. Hum. Genet.
, vol.69
, pp. 831-843
-
-
Frisse, L.1
Hudson, R.R.2
Bartoszewicz, A.3
Wall, J.4
Donfack, J.5
Di Rienzo, A.6
-
21
-
-
0029980416
-
New statistical tests of neutrality for DNA samples from a population
-
Fu, Y. 1996. New statistical tests of neutrality for DNA samples from a population. Genetics 143: 557-570.
-
(1996)
Genetics
, vol.143
, pp. 557-570
-
-
Fu, Y.1
-
22
-
-
0030821992
-
Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection
-
_. 1997. Statistical tests of neutrality of mutations against population growth, hitchhiking and background selection. Genetics 147: 915-925.
-
(1997)
Genetics
, vol.147
, pp. 915-925
-
-
-
23
-
-
0027453041
-
Statistical test of neutrality of mutations
-
Fu, Y.X. and Li, W.H. 1993. Statistical test of neutrality of mutations. Genetics 133: 693-709.
-
(1993)
Genetics
, vol.133
, pp. 693-709
-
-
Fu, Y.X.1
Li, W.H.2
-
24
-
-
10344224540
-
The role of barren stalk1 in the architecture of maize
-
Gallavotti, A., Zhao, Q., Kyozuka, J., Meeley, R.B., Ritter, M.K., Doebley, J.F., Pe, M.E., and Schmidt, R.J. 2004. The role of barren stalk1 in the architecture of maize. Nature 432: 630-635.
-
(2004)
Nature
, vol.432
, pp. 630-635
-
-
Gallavotti, A.1
Zhao, Q.2
Kyozuka, J.3
Meeley, R.B.4
Ritter, M.K.5
Doebley, J.F.6
Pe, M.E.7
Schmidt, R.J.8
-
25
-
-
0029812835
-
Substitution rate comparison between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL
-
Gaut, B.S., Morton, B.R., McCaig, B.M., and Clegg, M.T. 1996. Substitution rate comparison between grasses and palms: Synonymous rate differences at the nuclear gene Adh parallel rate differences at the plastid gene rbcL. Proc. Natl. Acad. Sci. 93: 10274-10279.
-
(1996)
Proc. Natl. Acad. Sci.
, vol.93
, pp. 10274-10279
-
-
Gaut, B.S.1
Morton, B.R.2
McCaig, B.M.3
Clegg, M.T.4
-
26
-
-
0347065347
-
Demography and natural selection have shaped genetic variation in Drosophila melanogaster: A multi-locus approach
-
Glinka, S., Ometto, L., Mousset, S., Stephan, W., and Lorenzo, D.D. 2003. Demography and natural selection have shaped genetic variation in Drosophila melanogaster: A multi-locus approach. Genetics 165: 1269-1278.
-
(2003)
Genetics
, vol.165
, pp. 1269-1278
-
-
Glinka, S.1
Ometto, L.2
Mousset, S.3
Stephan, W.4
Lorenzo, D.D.5
-
27
-
-
22344444998
-
Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations
-
Haddrill, P.R., Thornton, K.R., Charlesworth, B., and Andolfatto, P. 2005. Multilocus patterns of nucleotide variability and the demographic and selection history of Drosophila melanogaster populations. Genome Res. 15: 790-799.
-
(2005)
Genome Res.
, vol.15
, pp. 790-799
-
-
Haddrill, P.R.1
Thornton, K.R.2
Charlesworth, B.3
Andolfatto, P.4
-
28
-
-
0033911892
-
Detection of the signature of natural selection in humans: Evidence from the Duffy blood group locus
-
Hamblin, M.T. and Di Rienzo, A. 2000. Detection of the signature of natural selection in humans: Evidence from the Duffy blood group locus. Am. J. Hum. Genet. 66: 1669-1679.
-
(2000)
Am. J. Hum. Genet.
, vol.66
, pp. 1669-1679
-
-
Hamblin, M.T.1
Di Rienzo, A.2
-
29
-
-
4644354737
-
Heterogeneous patterns of variation among multiple human X-linked Loci: The possible role of diversity-reducing selection in non-Africans
-
Hammer, M.F., Garrigan, D., Wood, E., Wilder, J.A., Mobasher, Z., Bigham, A., Krenz, J.G., and Nachman, M.W. 2004. Heterogeneous patterns of variation among multiple human X-linked Loci: The possible role of diversity-reducing selection in non-Africans. Genetics 167: 1841-1853.
-
(2004)
Genetics
, vol.167
, pp. 1841-1853
-
-
Hammer, M.F.1
Garrigan, D.2
Wood, E.3
Wilder, J.A.4
Mobasher, Z.5
Bigham, A.6
Krenz, J.G.7
Nachman, M.W.8
-
30
-
-
0036790812
-
Hitchhiking mapping: A population-based fine-mapping strategy for adaptive mutations in Drosophila melanogaster
-
Harr, B., Kauer, M., and Schlötterer, C. 2002. Hitchhiking mapping: A population-based fine-mapping strategy for adaptive mutations in Drosophila melanogaster. Proc. Natl. Acad. Sci. 99: 12949-12954.
-
(2002)
Proc. Natl. Acad. Sci.
, vol.99
, pp. 12949-12954
-
-
Harr, B.1
Kauer, M.2
Schlötterer, C.3
-
31
-
-
18844439645
-
Soft sweeps: Molecular population genetics of adaptation from standing genetic variation
-
Hermisson, J. and Pennings, P.S. 2005. Soft sweeps: Molecular population genetics of adaptation from standing genetic variation. Genetics 169: 2335-2352.
-
(2005)
Genetics
, vol.169
, pp. 2335-2352
-
-
Hermisson, J.1
Pennings, P.S.2
-
32
-
-
13844313862
-
Whole-genome patterns of common DNA variation in three human populations
-
Hinds, D.A., Stuve, L.L., Nilsen, G.B., Halperin, E., Eskin, E., Ballinger, D.G., Frazer, K.A., and Cox, D.R. 2005. Whole-genome patterns of common DNA variation in three human populations. Science 307: 1072-1079.
-
(2005)
Science
, vol.307
, pp. 1072-1079
-
-
Hinds, D.A.1
Stuve, L.L.2
Nilsen, G.B.3
Halperin, E.4
Eskin, E.5
Ballinger, D.G.6
Frazer, K.A.7
Cox, D.R.8
-
33
-
-
0001935493
-
Gene genealogies and the coalescent process
-
eds. D. Futuyma and J. Antonovics, Oxford University Press, Oxford, UK
-
Hudson, R.R. 1990. Gene genealogies and the coalescent process. In Oxford surveys in evolutionary biology (eds. D. Futuyma and J. Antonovics), Vol. 7, pp. 1-44. Oxford University Press, Oxford, UK.
-
(1990)
Oxford Surveys in Evolutionary Biology
, vol.7
, pp. 1-44
-
-
Hudson, R.R.1
-
34
-
-
0344500841
-
A scan for linkage disequilibrium across the human genome
-
Huttley, G.A., Smith, M.W., Carrington, M., and O'Brien, S.J. 1999. A scan for linkage disequilibrium across the human genome. Genetics 152: 1711-1722.
-
(1999)
Genetics
, vol.152
, pp. 1711-1722
-
-
Huttley, G.A.1
Smith, M.W.2
Carrington, M.3
O'Brien, S.J.4
-
35
-
-
3242714766
-
Pattern of polymorphism after strong artificial selection in a domestication event
-
Innan, H. and Kim, Y. 2004. Pattern of polymorphism after strong artificial selection in a domestication event. Proc. Natl. Acad. Sci. 101: 10667-10672.
-
(2004)
Proc. Natl. Acad. Sci.
, vol.101
, pp. 10667-10672
-
-
Innan, H.1
Kim, Y.2
-
36
-
-
79959524146
-
A haplotype map of the human genome
-
International HapMap Consortium. 2005. A haplotype map of the human genome. Nature 437: 1299-1320.
-
(2005)
Nature
, vol.437
, pp. 1299-1320
-
-
-
37
-
-
23344438911
-
Distinguishing between selective sweeps and demography using DNA polymorphism data
-
Jensen, J.D., Kim, Y., DuMont, V.B., Aquadro, C.F., and Bustamante, C.D. 2005. Distinguishing between selective sweeps and demography using DNA polymorphism data. Genetics 170: 1401-1410.
-
(2005)
Genetics
, vol.170
, pp. 1401-1410
-
-
Jensen, J.D.1
Kim, Y.2
DuMont, V.B.3
Aquadro, C.F.4
Bustamante, C.D.5
-
38
-
-
0024372736
-
The "hitchhiking effect" revisited
-
Kaplan, N.L., Hudson, R.R., and Langley, C.H. 1989. The "hitchhiking effect" revisited. Genetics 123: 887-899.
-
(1989)
Genetics
, vol.123
, pp. 887-899
-
-
Kaplan, N.L.1
Hudson, R.R.2
Langley, C.H.3
-
39
-
-
0038586483
-
A genome scan to detect candidate regions influenced by local natural selection in human populations
-
Kayser, M., Brauer, S., and Stoneking, M. 2003. A genome scan to detect candidate regions influenced by local natural selection in human populations. Mol. Biol. Evol. 20: 893-900.
-
(2003)
Mol. Biol. Evol.
, vol.20
, pp. 893-900
-
-
Kayser, M.1
Brauer, S.2
Stoneking, M.3
-
40
-
-
0036189827
-
Detecting a local signature of genetic hitchhiking along a recombining chromosome
-
Kim, Y. and Stephan, W. 2002. Detecting a local signature of genetic hitchhiking along a recombining chromosome. Genetics 160: 765-777.
-
(2002)
Genetics
, vol.160
, pp. 765-777
-
-
Kim, Y.1
Stephan, W.2
-
41
-
-
0016220238
-
The hitch-hiking effect of a favourable gene
-
Maynard-Smith, J. and Haigh, J. 1974. The hitch-hiking effect of a favourable gene. Genet. Res. 23: 23-35.
-
(1974)
Genet. Res.
, vol.23
, pp. 23-35
-
-
Maynard-Smith, J.1
Haigh, J.2
-
42
-
-
2142773942
-
The fine scale structure of recombination rate variation in the human genome
-
McVean, G.A., Myers, S.R., Hunt, S., Deloukas, P., Bentley, D.R., and Donnelly, P. 2004. The fine scale structure of recombination rate variation in the human genome. Science 304: 581-584.
-
(2004)
Science
, vol.304
, pp. 581-584
-
-
McVean, G.A.1
Myers, S.R.2
Hunt, S.3
Deloukas, P.4
Bentley, D.R.5
Donnelly, P.6
-
43
-
-
32944481700
-
Perspectives on human genetic variation from HapMap project
-
McVean, G., Spencer, C.C.A., and Chaix, R. 2005. Perspectives on human genetic variation from HapMap project. PLoS Genet. 1: e54.
-
(2005)
PLoS Genet.
, vol.1
-
-
McVean, G.1
Spencer, C.C.A.2
Chaix, R.3
-
44
-
-
26844482093
-
A fine-scale map of recombination rates and hotspots across human genome
-
Myers, S., Bottolo, L., Freeman, C., McVean, G., and Donnelly, P. 2005. A fine-scale map of recombination rates and hotspots across human genome. Science 310: 321-324.
-
(2005)
Science
, vol.310
, pp. 321-324
-
-
Myers, S.1
Bottolo, L.2
Freeman, C.3
McVean, G.4
Donnelly, P.5
-
45
-
-
0034809334
-
Statistical tests of selective neutrality in the age of genomics
-
Nielsen, R. 2001. Statistical tests of selective neutrality in the age of genomics. Heredity 86: 641-647.
-
(2001)
Heredity
, vol.86
, pp. 641-647
-
-
Nielsen, R.1
-
46
-
-
27544437635
-
Genomic scans for selective sweeps using SNP data
-
Nielsen, R., Williamson, S., Kim, Y., Hubisz, M.J., Clark, A.G., and Bustamante, C. 2005. Genomic scans for selective sweeps using SNP data. Genome Res. 15: 1566.
-
(2005)
Genome Res.
, vol.15
, pp. 1566
-
-
Nielsen, R.1
Williamson, S.2
Kim, Y.3
Hubisz, M.J.4
Clark, A.G.5
Bustamante, C.6
-
47
-
-
24744465216
-
Inferring the effects of demography and selection on Drosophila melanogaster populations from a chromosome-wide scan of DNA variation
-
Ometto, L., Glink, S., De Lorenzo, D., and Stephan, W. 2005. Inferring the effects of demography and selection on Drosophila melanogaster populations from a chromosome-wide scan of DNA variation. Mol. Biol. Evol. 22: 2119-2130.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 2119-2130
-
-
Ometto, L.1
Glink, S.2
De Lorenzo, D.3
Stephan, W.4
-
48
-
-
0037398394
-
The distribution of fitness effects among beneficial mutations
-
Orr, A. 2003. The distribution of fitness effects among beneficial mutations. Genetics 163: 1519-1526.
-
(2003)
Genetics
, vol.163
, pp. 1519-1526
-
-
Orr, A.1
-
49
-
-
0035109378
-
Haldane's sieve and adaptation from the standing genetic variation
-
Orr, A. and Betancourt, A.J. 2001. Haldane's sieve and adaptation from the standing genetic variation. Genetics 157: 875-884.
-
(2001)
Genetics
, vol.157
, pp. 875-884
-
-
Orr, A.1
Betancourt, A.J.2
-
50
-
-
0036196885
-
The signature of positive selection at randomly chosen loci
-
Przeworski, M. 2002. The signature of positive selection at randomly chosen loci. Genetics 160: 1179-1189.
-
(2002)
Genetics
, vol.160
, pp. 1179-1189
-
-
Przeworski, M.1
-
51
-
-
0041817545
-
Estimating the time since the fixation of a beneficial allele
-
_. 2003. Estimating the time since the fixation of a beneficial allele. Genetics 164: 1667-1676.
-
(2003)
Genetics
, vol.164
, pp. 1667-1676
-
-
-
52
-
-
0034237204
-
Adjusting the focus on human variation
-
Przeworski, M., Hudson, R.R., and Di Rienzo, A. 2000. Adjusting the focus on human variation. Trends Genet. 16: 296-302.
-
(2000)
Trends Genet.
, vol.16
, pp. 296-302
-
-
Przeworski, M.1
Hudson, R.R.2
Di Rienzo, A.3
-
53
-
-
28644440530
-
The signature of positive selection on standing genetic variation
-
Przeworski, M., Coop, G., and Wall, J.D. 2005. The signature of positive selection on standing genetic variation. Evolution Int. J. Org. Evolution 59: 2312-2323.
-
(2005)
Evolution Int. J. Org. Evolution
, vol.59
, pp. 2312-2323
-
-
Przeworski, M.1
Coop, G.2
Wall, J.D.3
-
54
-
-
27644509150
-
Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa
-
Ramachandran, S., Deshpande, O., Roseman, C.C., Rosenberg, N.A., Feldman, M.W., and Cavalli-Sforza, L.L. 2005. Support from the relationship of genetic and geographic distance in human populations for a serial founder effect originating in Africa. Proc. Natl. Acad. Sci. 102: 15942-15947.
-
(2005)
Proc. Natl. Acad. Sci.
, vol.102
, pp. 15942-15947
-
-
Ramachandran, S.1
Deshpande, O.2
Roseman, C.C.3
Rosenberg, N.A.4
Feldman, M.W.5
Cavalli-Sforza, L.L.6
-
55
-
-
0035949653
-
Structure of linkage disequilibrium and phenotypic associations in the maize genome
-
Remington, D.L., Thornsberry, J.M., Matsuoka, Y., Wilson, L.M., Whitt, S.R., Doebley, J., Kresovich, S., Goodman, M.M., and Buckler, E.S. 2001. Structure of linkage disequilibrium and phenotypic associations in the maize genome. Proc. Natl. Acad. Sci. 98: 11479-11484.
-
(2001)
Proc. Natl. Acad. Sci.
, vol.98
, pp. 11479-11484
-
-
Remington, D.L.1
Thornsberry, J.M.2
Matsuoka, Y.3
Wilson, L.M.4
Whitt, S.R.5
Doebley, J.6
Kresovich, S.7
Goodman, M.M.8
Buckler, E.S.9
-
56
-
-
0016513539
-
Letters to the editors: Remarks on the Lewontin-Krakauer test
-
Robertson, A. 1975. Letters to the editors: Remarks on the Lewontin-Krakauer test. Genetics 80: 396.
-
(1975)
Genetics
, vol.80
, pp. 396
-
-
Robertson, A.1
-
57
-
-
25444440354
-
The extent of linkage disequilibrium caused by selection on G6PD in humans
-
Saunders, M.A., Slatkin, M., Garner, C., Hammer, M.F., and Nachman, M.W. 2005. The extent of linkage disequilibrium caused by selection on G6PD in humans. Genetics 171: 1219-1229.
-
(2005)
Genetics
, vol.171
, pp. 1219-1229
-
-
Saunders, M.A.1
Slatkin, M.2
Garner, C.3
Hammer, M.F.4
Nachman, M.W.5
-
58
-
-
0026460082
-
Population genetics of polymorphism and divergence
-
Sawyer, S.A. and Hartl, D.L. 1992. Population genetics of polymorphism and divergence. Genetics 132: 1161-1176.
-
(1992)
Genetics
, vol.132
, pp. 1161-1176
-
-
Sawyer, S.A.1
Hartl, D.L.2
-
59
-
-
27544497650
-
Calibrating a coalescent simulation of human genome sequence variation
-
Schaffner, S.F., Foo, C., Gabriel, S., Reich, D., Daly, M.J., and Altshuler, D. 2005. Calibrating a coalescent simulation of human genome sequence variation. Genome Res. 15: 1576-1583.
-
(2005)
Genome Res.
, vol.15
, pp. 1576-1583
-
-
Schaffner, S.F.1
Foo, C.2
Gabriel, S.3
Reich, D.4
Daly, M.J.5
Altshuler, D.6
-
60
-
-
0035978759
-
Natural selection and resistance to HIV
-
Schliekelman, P., Garner, C., and Slatkin, M. 2001. Natural selection and resistance to HIV. Nature 411: 545-546.
-
(2001)
Nature
, vol.411
, pp. 545-546
-
-
Schliekelman, P.1
Garner, C.2
Slatkin, M.3
-
61
-
-
0037213556
-
Hitchhiking mapping - Functional genomics from the population genetics perspective
-
Schlötterer, C. 2003. Hitchhiking mapping - Functional genomics from the population genetics perspective. Trends Genet. 19: 32-38.
-
(2003)
Trends Genet.
, vol.19
, pp. 32-38
-
-
Schlötterer, C.1
-
62
-
-
3042692452
-
Patterns of microsatellite variability among X chromosomes and autosomes indicate a high frequency of beneficial mutations in non-African D. simulans
-
Schöfl, G. and Schlötterer, C. 2004. Patterns of microsatellite variability among X chromosomes and autosomes indicate a high frequency of beneficial mutations in non-African D. simulans. Mol. Biol. Evol. 21: 1384-1390.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1384-1390
-
-
Schöfl, G.1
Schlötterer, C.2
-
63
-
-
0029099781
-
Properties of statistical tests of neutrality for DNA polymorphism data
-
Simonsen, K.L., Churchill, G.A., and Aquadro, C.F. 1995. Properties of statistical tests of neutrality for DNA polymorphism data. Genetics 141: 413-429.
-
(1995)
Genetics
, vol.141
, pp. 413-429
-
-
Simonsen, K.L.1
Churchill, G.A.2
Aquadro, C.F.3
-
64
-
-
0034884532
-
Simulating genealogies of selected alleles in a population of variable size
-
Slatkin, M. 2001. Simulating genealogies of selected alleles in a population of variable size. Genet. Res. 78: 49-57.
-
(2001)
Genet. Res.
, vol.78
, pp. 49-57
-
-
Slatkin, M.1
-
65
-
-
0031825318
-
Genetic hitch-hiking in a subdivided population
-
Slatkin, M. and Wiehe, T. 1998. Genetic hitch-hiking in a subdivided population. Genet. Res. 71: 155-160.
-
(1998)
Genet. Res.
, vol.71
, pp. 155-160
-
-
Slatkin, M.1
Wiehe, T.2
-
66
-
-
10344221021
-
Disentangling the effects of demography and selection in human history
-
Stajich, E.S. and Hahn, M.W. 2005. Disentangling the effects of demography and selection in human history. Mol. Biol. Evol. 22: 63-73.
-
(2005)
Mol. Biol. Evol.
, vol.22
, pp. 63-73
-
-
Stajich, E.S.1
Hahn, M.W.2
-
67
-
-
4143088044
-
Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa
-
Storz, J.F., Payseur, B.A., and Nachman, M.W. 2004. Genome scans of DNA variability in humans reveal evidence for selective sweeps outside of Africa. Mol. Biol. Evol. 21: 1800-1811.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1800-1811
-
-
Storz, J.F.1
Payseur, B.A.2
Nachman, M.W.3
-
68
-
-
0021066244
-
Evolutionary relationship of DNA sequences in finite populations
-
Tajima, F. 1983. Evolutionary relationship of DNA sequences in finite populations. Genetics 105: 437-460.
-
(1983)
Genetics
, vol.105
, pp. 437-460
-
-
Tajima, F.1
-
69
-
-
0024313579
-
Statistical method for testing the neutral mutation hypothesis by DNA polymorphism
-
_. 1989a. Statistical method for testing the neutral mutation hypothesis by DNA polymorphism. Genetics 123: 585-595.
-
(1989)
Genetics
, vol.123
, pp. 585-595
-
-
-
70
-
-
0024762773
-
The effect of change in population size on DNA polymorphism
-
_. 1989b. The effect of change in population size on DNA polymorphism. Genetics 123: 597-601.
-
(1989)
Genetics
, vol.123
, pp. 597-601
-
-
-
71
-
-
3042595170
-
Selection versus demography: A multilocus investigation of the domestication process in maize
-
Tenaillon, M.I., U'Ren, J., Tenaillon, O., and Gaut, B.S. 2004. Selection versus demography: A multilocus investigation of the domestication process in maize. Mol. Biol. Evol. 21: 1214-1225.
-
(2004)
Mol. Biol. Evol.
, vol.21
, pp. 1214-1225
-
-
Tenaillon, M.I.1
U'Ren, J.2
Tenaillon, O.3
Gaut, B.S.4
-
72
-
-
33644778674
-
Directional positive selection on alleles of arbitrary dominance
-
Teshima, K.M. and Przeworski, M. 2006. Directional positive selection on alleles of arbitrary dominance. Genetics 172: 713-718.
-
(2006)
Genetics
, vol.172
, pp. 713-718
-
-
Teshima, K.M.1
Przeworski, M.2
-
73
-
-
8844271778
-
CYP3A variation and the evolution of salt-sensitivity variants
-
Thompson, E.E., Kuttab-Boulos, H., Witonsky, D., Yang, L., Roe, B.A., and Di Rienzo, A. 2004. CYP3A variation and the evolution of salt-sensitivity variants. Am. J. Hum. Genet. 75: 1059-1069.
-
(2004)
Am. J. Hum. Genet.
, vol.75
, pp. 1059-1069
-
-
Thompson, E.E.1
Kuttab-Boulos, H.2
Witonsky, D.3
Yang, L.4
Roe, B.A.5
Di Rienzo, A.6
-
74
-
-
33644763127
-
Approximate Bayesian inference reveals evidence for a recent, severe, bottleneck in Netherlands populations of Drosophila melanogaster
-
Thornton, K.R. and Andolfatto, P. 2006. Approximate Bayesian inference reveals evidence for a recent, severe, bottleneck in Netherlands populations of Drosophila melanogaster. Genetics 172: 1607-1619.
-
(2006)
Genetics
, vol.172
, pp. 1607-1619
-
-
Thornton, K.R.1
Andolfatto, P.2
-
75
-
-
29444451610
-
Interrogating multiple aspects of variation in a full re-sequencing data set to infer human population size
-
Voight, B.F., Adams, A.M., Frisse, L.A., Qian, Y., Hudson, R.R., and Di Rienzo, A. 2005. Interrogating multiple aspects of variation in a full re-sequencing data set to infer human population size. Proc. Natl. Acad. Sci. 102: 18508-18513.
-
(2005)
Proc. Natl. Acad. Sci.
, vol.102
, pp. 18508-18513
-
-
Voight, B.F.1
Adams, A.M.2
Frisse, L.A.3
Qian, Y.4
Hudson, R.R.5
Di Rienzo, A.6
-
76
-
-
33644981509
-
A map of recent positive selection in the human genome
-
Voight, B.F., Kudaravalli, S., Wen, X., and Pritchard, J.K. 2006. A map of recent positive selection in the human genome. PLoS Biol. 4: e72.
-
(2006)
PLoS Biol.
, vol.4
-
-
Voight, B.F.1
Kudaravalli, S.2
Wen, X.3
Pritchard, J.K.4
-
77
-
-
0036743513
-
Testing models of selection and demography in Drosophila simulans
-
Wall, J.D., Andolfatto, P., and Przeworski, M. 2002. Testing models of selection and demography in Drosophila simulans. Genetics 162: 203-216.
-
(2002)
Genetics
, vol.162
, pp. 203-216
-
-
Wall, J.D.1
Andolfatto, P.2
Przeworski, M.3
-
78
-
-
33644522070
-
Searching for signals of evolutionary selection in 168 genes related to immune function
-
Walsh, E., Sabeti, P., Hutcheson, H., Fry, B., Schaffner, S., de Bakker, P., Varilly, P., Palma, A., Roy, J., Cooper, R., et al. 2006. Searching for signals of evolutionary selection in 168 genes related to immune function. Hum. Genet. 119: 92-102.
-
(2006)
Hum. Genet.
, vol.119
, pp. 92-102
-
-
Walsh, E.1
Sabeti, P.2
Hutcheson, H.3
Fry, B.4
Schaffner, S.5
De Bakker, P.6
Varilly, P.7
Palma, A.8
Roy, J.9
Cooper, R.10
-
79
-
-
23644434862
-
The origin of the naked grains of maize
-
Wang, H., Nussbaum-Wagler, T., Li, B., Zhao, Q., Vigouroux, Y., Faller, M., Bomblies, K., Lukens, L., and Doebley, J.F. 2005. The origin of the naked grains of maize. Nature 436: 714-719.
-
(2005)
Nature
, vol.436
, pp. 714-719
-
-
Wang, H.1
Nussbaum-Wagler, T.2
Li, B.3
Zhao, Q.4
Vigouroux, Y.5
Faller, M.6
Bomblies, K.7
Lukens, L.8
Doebley, J.F.9
-
80
-
-
0016491430
-
On the number of segregating sites in genetical models without recombination
-
Watterson, G.A. 1975. On the number of segregating sites in genetical models without recombination. Theor. Popul. Biol. 7: 256-276.
-
(1975)
Theor. Popul. Biol.
, vol.7
, pp. 256-276
-
-
Watterson, G.A.1
-
81
-
-
19744371138
-
The effect of artificial selection on the maize genome
-
Wright, S.I., Bi, I.V., Schroeder, S.G., Yamasaki, M., Doebley, J.F., McMullen, M.D., and Gaut, B.S. 2005. The effect of artificial selection on the maize genome. Science 308: 1310-1314.
-
(2005)
Science
, vol.308
, pp. 1310-1314
-
-
Wright, S.I.1
Bi, I.V.2
Schroeder, S.G.3
Yamasaki, M.4
Doebley, J.F.5
McMullen, M.D.6
Gaut, B.S.7
-
82
-
-
33344469072
-
A large-scale screen for artificial selection in maize identifiers candidate agronomic loci for domestication and crop improvement
-
Yamasaki, M., Tenaillon, M.I., Bi, I.V., Schroeder, S.G., Sanchez-Villeda, H., Doebley, J.F., Gaut, B.S., and McMullen, M.D. 2005. A large-scale screen for artificial selection in maize identifiers candidate agronomic loci for domestication and crop improvement. Plant Cell 17: 2859-2872.
-
(2005)
Plant Cell
, vol.17
, pp. 2859-2872
-
-
Yamasaki, M.1
Tenaillon, M.I.2
Bi, I.V.3
Schroeder, S.G.4
Sanchez-Villeda, H.5
Doebley, J.F.6
Gaut, B.S.7
McMullen, M.D.8
-
83
-
-
27744541698
-
Distribution of the strength of selection against amino acid replacements in human proteins
-
Yampolsky, L.Y., Kondrashov, F.A., and Kondrashov, A.S. 2005. Distribution of the strength of selection against amino acid replacements in human proteins. Hum. Mol. Genet. 14: 3191-3201.
-
(2005)
Hum. Mol. Genet.
, vol.14
, pp. 3191-3201
-
-
Yampolsky, L.Y.1
Kondrashov, F.A.2
Kondrashov, A.S.3
-
84
-
-
55449131653
-
Differential susceptibility to hypertension is due to selection during the out-of-Africa expansion
-
Young, J.H., Chang, Y.P.C., Kim, J.D.O., Chretien, J.P., Klag, M.J., Levine, M.A., Ruff, C.B., Wang, N.Y., and Chakravarti, A. 2005. Differential susceptibility to hypertension is due to selection during the out-of-Africa expansion. PLoS Genet. 1: e82.
-
(2005)
PLoS Genet.
, vol.1
-
-
Young, J.H.1
Chang, Y.P.C.2
Kim, J.D.O.3
Chretien, J.P.4
Klag, M.J.5
Levine, M.A.6
Ruff, C.B.7
Wang, N.Y.8
Chakravarti, A.9
|