메뉴 건너뛰기




Volumn 48, Issue 22, 2009, Pages 4677-4690

Visualizing sequence-governed nucleotide selectivities and mutagenic consequences through a replicative cycle: Processing of a bulky carcinogen N2-dG lesion in a Y-family DNA polymerase

Author keywords

[No Author keywords available]

Indexed keywords

ACTIVE SITE; BENZO [A] PYRENE; DNA POLYMERASE; DYNAMICS SIMULATION; ERROR PRONE; EXPERIMENTAL OBSERVATION; LESION BYPASS; MOLECULAR ORIGINS; PRIMER EXTENSION; RELATIVE DISTORTION; STRUCTURAL INSIGHTS; STRUCTURAL INTERPRETATION; TRANSLESION;

EID: 66649115699     PISSN: 00062960     EISSN: None     Source Type: Journal    
DOI: 10.1021/bi802363f     Document Type: Article
Times cited : (15)

References (63)
  • 1
    • 0037115955 scopus 로고    scopus 로고
    • How DNA lesions are turned into mutations within cells?
    • Pages, V., and Fuchs, R. P. (2002) How DNA lesions are turned into mutations within cells?. Oncogene 21, 8957-8966.
    • (2002) Oncogene , vol.21 , pp. 8957-8966
    • Pages, V.1    Fuchs, R.P.2
  • 3
    • 19444383801 scopus 로고    scopus 로고
    • Trading places: How do DNA polymerases switch during translesion DNA synthesis?
    • Friedberg, E. C., Lehmann, A. R., and Fuchs, R. P. (2005) Trading places: How do DNA polymerases switch during translesion DNA synthesis?. Mol. Cell 18, 499-505.
    • (2005) Mol. Cell , vol.18 , pp. 499-505
    • Friedberg, E.C.1    Lehmann, A.R.2    Fuchs, R.P.3
  • 4
    • 21244506437 scopus 로고    scopus 로고
    • Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function
    • Prakash, S., Johnson, R. E., and Prakash, L. (2005) Eukaryotic translesion synthesis DNA polymerases: Specificity of structure and function. Annu. Rev. Biochem. 74, 317-353.
    • (2005) Annu. Rev. Biochem. , vol.74 , pp. 317-353
    • Prakash, S.1    Johnson, R.E.2    Prakash, L.3
  • 5
    • 33746775293 scopus 로고    scopus 로고
    • Translesion synthesis in mammalian cells
    • Lehmann, A. R. (2006) Translesion synthesis in mammalian cells. Exp. Cell Res. 312, 2673-2676.
    • (2006) Exp. Cell Res. , vol.312 , pp. 2673-2676
    • Lehmann, A.R.1
  • 6
    • 35648951199 scopus 로고    scopus 로고
    • What a difference a decade makes: Insights into translesion DNA synthesis
    • Yang, W., and Woodgate, R. (2007) What a difference a decade makes: Insights into translesion DNA synthesis. Proc. Natl. Acad. Sci. U.S.A. 104, 15591-15598.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 15591-15598
    • Yang, W.1    Woodgate, R.2
  • 7
    • 13444273224 scopus 로고    scopus 로고
    • Nature and nurture: Lessons from chemical carcinogenesis
    • Luch, A. (2005) Nature and nurture: Lessons from chemical carcinogenesis. Nat. Rev. Cancer 5, 113-125.
    • (2005) Nat. Rev. Cancer , vol.5 , pp. 113-125
    • Luch, A.1
  • 8
    • 0020431144 scopus 로고
    • Induction of microsomal enzymes by foreign chemicals and carcinogenesis by polycyclic aromatic hydrocarbons: G. H. A. Clowes Memorial Lecture
    • Conney, A. H. (1982) Induction of microsomal enzymes by foreign chemicals and carcinogenesis by polycyclic aromatic hydrocarbons: G. H. A. Clowes Memorial Lecture. Cancer Res. 42, 4875-4917.
    • (1982) Cancer Res. , vol.42 , pp. 4875-4917
    • Conney, A.H.1
  • 9
    • 0029080079 scopus 로고
    • Central role of radical cations in metabolic activation of polycyclic aromatic hydrocarbons
    • Cavalieri, E. L., and Rogan, E. G. (1995) Central role of radical cations in metabolic activation of polycyclic aromatic hydrocarbons. Xenobiotica 25, 677-688.
    • (1995) Xenobiotica , vol.25 , pp. 677-688
    • Cavalieri, E.L.1    Rogan, E.G.2
  • 10
    • 0032510704 scopus 로고    scopus 로고
    • Expression and characterization of four recombinant human dihydrodiol dehydrogenase isoforms: Oxidation of trans-7, 8-dihydroxy- 7,8-dihydrobenzo[a] pyrene to the activated o-quinone metabolite benzo[a]pyrene-7,8-dione
    • Burczynski, M. E., Harvey, R. G., and Penning, T. M. (1998) Expression and characterization of four recombinant human dihydrodiol dehydrogenase isoforms: Oxidation of trans-7, 8-dihydroxy- 7,8-dihydrobenzo[a]pyrene to the activated o-quinone metabolite benzo[a]pyrene-7,8-dione. Biochemistry 37, 6781-6790.
    • (1998) Biochemistry , vol.37 , pp. 6781-6790
    • Burczynski, M.E.1    Harvey, R.G.2    Penning, T.M.3
  • 11
    • 0000933858 scopus 로고
    • Tumorigenicity of the optical enantiomers of the diastereomeric benzo[a]pyrene 7,8-diol-9,10-epoxides in newborn mice: Exceptional activity of (+)-7β,8α-dihydroxy-9α,10α-epoxy-7,8,9, 10-tetrahydrobenzo[ a]pyrene
    • Buening, M. K., Wislocki, P. G., Levin, W., Yagi, H., Thakker, D. R., Akagi, H., Koreeda, M., Jerina, D. M., and Conney, A. H. (1978) Tumorigenicity of the optical enantiomers of the diastereomeric benzo[a]pyrene 7,8-diol-9,10-epoxides in newborn mice: Exceptional activity of (+)-7β,8α-dihydroxy-9α,10α-epoxy-7,8,9, 10-tetrahydrobenzo[ a]pyrene. Proc. Natl. Acad. Sci. U.S.A. 75, 5358-5361.
    • (1978) Proc. Natl. Acad. Sci. U.S.A. , vol.75 , pp. 5358-5361
    • Buening, M.K.1    Wislocki, P.G.2    Levin, W.3    Yagi, H.4    Thakker, D.R.5    Akagi, H.6    Koreeda, M.7    Jerina, D.M.8    Conney, A.H.9
  • 12
    • 0024442239 scopus 로고
    • DNAadducts from carcinogenic and noncarcinogenic enantiomers of benzo[a]pyrene dihydrodiol epoxide
    • Cheng, S. C., Hilton, B. D., Roman, J. M., and Dipple, A. (1989) DNAadducts from carcinogenic and noncarcinogenic enantiomers of benzo[a]pyrene dihydrodiol epoxide. Chem. Res. Toxicol. 2, 334-340.
    • (1989) Chem. Res. Toxicol. , vol.2 , pp. 334-340
    • Cheng, S.C.1    Hilton, B.D.2    Roman, J.M.3    Dipple, A.4
  • 14
    • 0018137343 scopus 로고
    • Binding of benzo[a]pyrene 7,8-diol-9,10-epoxides to DNA, RNA, and protein of mouse skin occurs with high stereoselectivity
    • Koreeda, M., Moore, P. D., Wislocki, P. G., Levin, W., Yagi, H., and Jerina, D. M. (1978) Binding of benzo[a]pyrene 7,8-diol-9,10-epoxides to DNA, RNA, and protein of mouse skin occurs with high stereoselectivity. Science 199, 778-781.
    • (1978) Science , vol.199 , pp. 778-781
    • Koreeda, M.1    Moore, P.D.2    Wislocki, P.G.3    Levin, W.4    Yagi, H.5    Jerina, D.M.6
  • 15
    • 34547829269 scopus 로고    scopus 로고
    • 2-dG adduct through replication: Elucidating blockage and bypass in a high-fidelity DNA polymerase
    • 2-dG adduct through replication: Elucidating blockage and bypass in a high-fidelity DNA polymerase. Nucleic Acids Res. 35, 4275-4288.
    • (2007) Nucleic Acids Res. , vol.35 , pp. 4275-4288
    • Xu, P.1    Oum, L.2    Beese, L.S.3    Geacintov, N.E.4    Broyde, S.5
  • 16
    • 0031568308 scopus 로고    scopus 로고
    • Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 Å resolution
    • Kiefer, J. R., Mao, C., Hansen, C. J., Basehore, S. L., Hogrefe, H. H., Braman, J. C., and Beese, L. S. (1997) Crystal structure of a thermostable Bacillus DNA polymerase I large fragment at 2.1 Å resolution. Structure 5, 95-108.
    • (1997) Structure , vol.5 , pp. 95-108
    • Kiefer, J.R.1    Mao, C.2    Hansen, C.J.3    Basehore, S.L.4    Hogrefe, H.H.5    Braman, J.C.6    Beese, L.S.7
  • 17
    • 0035890599 scopus 로고    scopus 로고
    • Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): An archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic polη
    • Boudsocq, F., Iwai, S., Hanaoka, F., and Woodgate, R. (2001) Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4): An archaeal DinB-like DNA polymerase with lesion-bypass properties akin to eukaryotic polη. Nucleic Acids Res. 29, 4607-4616.
    • (2001) Nucleic Acids Res. , vol.29 , pp. 4607-4616
    • Boudsocq, F.1    Iwai, S.2    Hanaoka, F.3    Woodgate, R.4
  • 18
    • 0034235584 scopus 로고    scopus 로고
    • Error-prone bypass of certain DNA lesions by the human DNA polymerase kappa
    • Ohashi, E., Ogi, T., Kusumoto, R., Iwai, S., Masutani, C., Hanaoka, F., and Ohmori, H. (2000) Error-prone bypass of certain DNA lesions by the human DNA polymerase kappa. Genes Dev. 14, 1589-1594.
    • (2000) Genes Dev. , vol.14 , pp. 1589-1594
    • Ohashi, E.1    Ogi, T.2    Kusumoto, R.3    Iwai, S.4    Masutani, C.5    Hanaoka, F.6    Ohmori, H.7
  • 19
    • 0032518524 scopus 로고    scopus 로고
    • Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal
    • Kiefer, J. R., Mao, C., Braman, J. C., and Beese, L. S. (1998) Visualizing DNA replication in a catalytically active Bacillus DNA polymerase crystal. Nature 391, 304-307.
    • (1998) Nature , vol.391 , pp. 304-307
    • Kiefer, J.R.1    Mao, C.2    Braman, J.C.3    Beese, L.S.4
  • 20
    • 0037388383 scopus 로고    scopus 로고
    • Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations
    • Johnson, S. J., Taylor, J. S., and Beese, L. S. (2003) Processive DNA synthesis observed in a polymerase crystal suggests a mechanism for the prevention of frameshift mutations. Proc. Natl. Acad. Sci. U.S.A. 100, 3895-3900.
    • (2003) Proc. Natl. Acad. Sci. U.S.A. , vol.100 , pp. 3895-3900
    • Johnson, S.J.1    Taylor, J.S.2    Beese, L.S.3
  • 21
    • 9644276853 scopus 로고    scopus 로고
    • Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase
    • Hsu, G. W., Kiefer, J. R., Burnouf, D., Becherel, O. J., Fuchs, R. P., and Beese, L. S. (2004) Observing translesion synthesis of an aromatic amine DNA adduct by a high-fidelity DNA polymerase. J. Biol. Chem. 279, 50280-50285.
    • (2004) J. Biol. Chem. , vol.279 , pp. 50280-50285
    • Hsu, G.W.1    Kiefer, J.R.2    Burnouf, D.3    Becherel, O.J.4    Fuchs, R.P.5    Beese, L.S.6
  • 22
    • 4544273926 scopus 로고    scopus 로고
    • Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase
    • Hsu, G. W., Ober, M., Carell, T., and Beese, L. S. (2004) Error-prone replication of oxidatively damaged DNA by a high-fidelity DNA polymerase. Nature 431, 217-221.
    • (2004) Nature , vol.431 , pp. 217-221
    • Hsu, G.W.1    Ober, M.2    Carell, T.3    Beese, L.S.4
  • 23
    • 1642588255 scopus 로고    scopus 로고
    • Structures of mismatch replication errors observed in a DNA polymerase
    • Johnson, S. J., and Beese, L. S. (2004) Structures of mismatch replication errors observed in a DNA polymerase. Cell 116, 803-816.
    • (2004) Cell , vol.116 , pp. 803-816
    • Johnson, S.J.1    Beese, L.S.2
  • 24
    • 13544276569 scopus 로고    scopus 로고
    • Structure of a high fidelity DNA polymerase bound to a benzo[a]pyre?e adduct that blocks replication
    • Hsu, G. W., Huang, X., Luneva, N. P., Geacintov, N. E., and Beese, L. S. (2005) Structure of a high fidelity DNA polymerase bound to a benzo[a]pyre?e adduct that blocks replication. J. Biol. Chem. 280, 3764-3770.
    • (2005) J. Biol. Chem. , vol.280 , pp. 3764-3770
    • Hsu, G.W.1    Huang, X.2    Luneva, N.P.3    Geacintov, N.E.4    Beese, L.S.5
  • 25
    • 0035812849 scopus 로고    scopus 로고
    • Crystal structure of a Y-family DNA polymerase in action: A mechanism for error-prone and lesion-bypass replication
    • Ling, H., Boudsocq, F., Woodgate, R., and Yang, W. (2001) Crystal structure of a Y-family DNA polymerase in action: A mechanism for error-prone and lesion-bypass replication. Cell 107, 91-102.
    • (2001) Cell , vol.107 , pp. 91-102
    • Ling, H.1    Boudsocq, F.2    Woodgate, R.3    Yang, W.4
  • 26
    • 0041864009 scopus 로고    scopus 로고
    • Replication of a cis-syn thymine dimer at atomic resolution
    • Ling, H., Boudsocq, F., Plosky, B. S., Woodgate, R., and Yang, W. (2003) Replication of a cis-syn thymine dimer at atomic resolution. Nature 424, 1083-1087.
    • (2003) Nature , vol.424 , pp. 1083-1087
    • Ling, H.1    Boudsocq, F.2    Plosky, B.S.3    Woodgate, R.4    Yang, W.5
  • 27
    • 1642382214 scopus 로고    scopus 로고
    • Snapshots of replication through an abasic lesion: Structural basis for base substitutions and frameshifts
    • Ling, H., Boudsocq, F., Woodgate, R., and Yang, W. (2004) Snapshots of replication through an abasic lesion: Structural basis for base substitutions and frameshifts. Mol. Cell 13, 751-762.
    • (2004) Mol. Cell , vol.13 , pp. 751-762
    • Ling, H.1    Boudsocq, F.2    Woodgate, R.3    Yang, W.4
  • 30
    • 3543028588 scopus 로고    scopus 로고
    • Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication
    • Boudsocq, F., Kokoska, R. J., Plosky, B. S., Vaisman, A., Ling, H., Kunkel, T. A., Yang, W., and Woodgate, R. (2004) Investigating the role of the little finger domain of Y-family DNA polymerases in low fidelity synthesis and translesion replication. J. Biol. Chem. 279, 32932-32940.
    • (2004) J. Biol. Chem. , vol.279 , pp. 32932-32940
    • Boudsocq, F.1    Kokoska, R.J.2    Plosky, B.S.3    Vaisman, A.4    Ling, H.5    Kunkel, T.A.6    Yang, W.7    Woodgate, R.8
  • 31
    • 27144542782 scopus 로고    scopus 로고
    • Fidelity of Dpo4: Effect of metal ions, nucleotide selection and pyrophosphorolysis
    • Vaisman, A., Ling, H., Woodgate, R., and Yang, W. (2005) Fidelity of Dpo4: Effect of metal ions, nucleotide selection and pyrophosphorolysis. EMBO J. 24, 2957-2967.
    • (2005) EMBO J. , vol.24 , pp. 2957-2967
    • Vaisman, A.1    Ling, H.2    Woodgate, R.3    Yang, W.4
  • 33
    • 33644866040 scopus 로고    scopus 로고
    • Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4
    • Zang, H., Irimia, A., Choi, J. Y., Angel, K. C., Loukachevitch, L. V., Egli, M., and Guengerich, F. P. (2006) Efficient and high fidelity incorporation of dCTP opposite 7,8-dihydro-8-oxodeoxyguanosine by Sulfolobus solfataricus DNA polymerase Dpo4. J. Biol. Chem. 281, 2358-2372.
    • (2006) J. Biol. Chem. , vol.281 , pp. 2358-2372
    • Zang, H.1    Irimia, A.2    Choi, J.Y.3    Angel, K.C.4    Loukachevitch, L.V.5    Egli, M.6    Guengerich, F.P.7
  • 35
    • 34547136494 scopus 로고    scopus 로고
    • Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4
    • Eoff, R. L., Irimia, A., Angel, K. C., Egli, M., and Guengerich, F. P. (2007) Hydrogen bonding of 7,8-dihydro-8-oxodeoxyguanosine with a charged residue in the little finger domain determines miscoding events in Sulfolobus solfataricus DNA polymerase Dpo4. J. Biol. Chem. 282, 19831-19843.
    • (2007) J. Biol. Chem. , vol.282 , pp. 19831-19843
    • Eoff, R.L.1    Irimia, A.2    Angel, K.C.3    Egli, M.4    Guengerich, F.P.5
  • 36
    • 47249085697 scopus 로고    scopus 로고
    • Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV
    • Wang, Y., Musser, S. K., Saleh, S., Marnett, L. J., Egli, M., and Stone, M. P. (2008) Insertion of dNTPs opposite the 1,N2-propanodeoxyguanosine adduct by Sulfolobus solfataricus P2 DNA polymerase IV. Biochemistry 47, 7322-7334.
    • (2008) Biochemistry , vol.47 , pp. 7322-7334
    • Wang, Y.1    Musser, S.K.2    Saleh, S.3    Marnett, L.J.4    Egli, M.5    Stone, M.P.6
  • 37
    • 37549025441 scopus 로고    scopus 로고
    • Structure and activity of Y-class DNA polymerase DPO4 from Sulfolobus solfataricus with templates containing t?e hydrophobic thymine analog 2,4-difluorotoluene
    • Irimia, A., Eoff, R. L., Pallan, P. S., Guengerich, F. P., and Egli, M. (2007) Structure and activity of Y-class DNA polymerase DPO4 from Sulfolobus solfataricus with templates containing t?e hydrophobic thymine analog 2,4-difluorotoluene. J. Biol. Chem. 282, 36421-36433.
    • (2007) J. Biol. Chem. , vol.282 , pp. 36421-36433
    • Irimia, A.1    Eoff, R.L.2    Pallan, P.S.3    Guengerich, F.P.4    Egli, M.5
  • 39
    • 35448977252 scopus 로고    scopus 로고
    • Astructural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment
    • Bauer, J., Xing, G., Yagi, H., Sayer, J. M., Jerina, D. M., and Ling, H. (2007)Astructural gap in Dpo4 supports mutagenic bypass of a major benzo[a]pyrene dG adduct in DNA through template misalignment. Proc. Natl. Acad. Sci. U.S.A. 104, 14905-14910.
    • (2007) Proc. Natl. Acad. Sci. U.S.A. , vol.104 , pp. 14905-14910
    • Bauer, J.1    Xing, G.2    Yagi, H.3    Sayer, J.M.4    Jerina, D.M.5    Ling, H.6
  • 40
    • 0026026192 scopus 로고
    • An induced-fit kinetic mechanism for DNA replication fidelity: Direct measurement by single-turnover kinetics
    • Wong, I., Patel, S. S., and Johnson, K. A. (1991) An induced-fit kinetic mechanism for DNA replication fidelity: Direct measurement by single-turnover kinetics. Biochemistry 30, 526-537.
    • (1991) Biochemistry , vol.30 , pp. 526-537
    • Wong, I.1    Patel, S.S.2    Johnson, K.A.3
  • 41
    • 0001858251 scopus 로고
    • Application of a Theory of Enzyme Specificity to Protein Synthesis
    • Koshland, D. E. (1958) Application of a Theory of Enzyme Specificity to Protein Synthesis. Proc. Natl. Acad. Sci. U.S.A. 44, 98-104.
    • (1958) Proc. Natl. Acad. Sci. U.S.A. , vol.44 , pp. 98-104
    • Koshland, D.E.1
  • 42
    • 0032425080 scopus 로고    scopus 로고
    • The mechanism of action of T7 DNA polymerase
    • Doublie, S., and Ellenberger, T. (1998) The mechanism of action of T7 DNA polymerase. Curr. Opin. Struct. Biol. 8, 704-712.
    • (1998) Curr. Opin. Struct. Biol. , vol.8 , pp. 704-712
    • Doublie, S.1    Ellenberger, T.2
  • 43
    • 0033577360 scopus 로고    scopus 로고
    • Minor groove interactions between polymerase and DNA: More essential to replication than Watson-Crick hydrogen bonds
    • Morales, J., and Kool, E. T. (1999) Minor groove interactions between polymerase and DNA: More essential to replication than Watson-Crick hydrogen bonds. J. Am. Chem. Soc. 121, 2323-2324.
    • (1999) J. Am. Chem. Soc. , vol.121 , pp. 2323-2324
    • Morales, J.1    Kool, E.T.2
  • 45
    • 40149110948 scopus 로고    scopus 로고
    • New York University, New York
    • 2-dG adducts, New York University, New York.
    • (2007) 2-dG Adducts
    • Oum, L.1
  • 46
    • 40149083124 scopus 로고    scopus 로고
    • 2-dG adduct in a Yfamily DNA polymerase: A 5′-slippage mechanism
    • 2-dG adduct in a Yfamily DNA polymerase: A 5′-slippage mechanism. Biochemistry 47, 2701-2709.
    • (2008) Biochemistry , vol.47 , pp. 2701-2709
    • Xu, P.1    Oum, L.2    Geacintov, N.E.3    Broyde, S.4
  • 47
    • 4344596952 scopus 로고    scopus 로고
    • The spacious active site of a Y-family DNA polymerase facilitates promiscuous nucleotide incorporation opposite a bulky carcinogen-DNA adduct: Elucidating the structure-function relationship through experimental and computational approaches
    • Perlow-Poehnelt, R. A., Likhterov, I., Scicchitano, D. A., Geacintov, N. E., and Broyde, S. (2004) The spacious active site of a Y-family DNA polymerase facilitates promiscuous nucleotide incorporation opposite a bulky carcinogen-DNA adduct: Elucidating the structure-function relationship through experimental and computational approaches. J. Biol. Chem. 279, 36951-36961.
    • (2004) J. Biol. Chem. , vol.279 , pp. 36951-36961
    • Perlow-Poehnelt, R.A.1    Likhterov, I.2    Scicchitano, D.A.3    Geacintov, N.E.4    Broyde, S.5
  • 48
    • 0035810955 scopus 로고    scopus 로고
    • Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I
    • Zhuang, P., Kolbanovskiy, A., Amin, S., and Geacintov, N. E. (2001) Base sequence dependence of in vitro translesional DNA replication past a bulky lesion catalyzed by the exo- Klenow fragment of Pol I. Biochemistry 40, 6660-6669.
    • (2001) Biochemistry , vol.40 , pp. 6660-6669
    • Zhuang, P.1    Kolbanovskiy, A.2    Amin, S.3    Geacintov, N.E.4
  • 49
    • 0027378738 scopus 로고
    • Quantitation of base substitutions and deletions induced by chemical mutagens during DNA synthesis in vitro
    • Shibutani, S. (1993) Quantitation of base substitutions and deletions induced by chemical mutagens during DNA synthesis in vitro. Chem. Res. Toxicol. 6, 625-629.
    • (1993) Chem. Res. Toxicol. , vol.6 , pp. 625-629
    • Shibutani, S.1
  • 51
    • 33644859916 scopus 로고    scopus 로고
    • A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4)
    • Wang, L., and Broyde, S. (2006) A new anti conformation for N-(deoxyguanosin-8-yl)-2-acetylaminofluorene (AAF-dG) allows Watson-Crick pairing in the Sulfolobus solfataricus P2 DNA polymerase IV (Dpo4). Nucleic Acids Res. 34, 785-795.
    • (2006) Nucleic Acids Res. , vol.34 , pp. 785-795
    • Wang, L.1    Broyde, S.2
  • 54
    • 0033537638 scopus 로고    scopus 로고
    • Stereochemical origin of opposite orientations in DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides with different tumorigenic potentials
    • Xie, X. M., Geacintov, N. E., and Broyde, S. (1999) Stereochemical origin of opposite orientations in DNA adducts derived from enantiomeric anti-benzo[a]pyrene diol epoxides with different tumorigenic potentials. Biochemistry 38, 2956-2968.
    • (1999) Biochemistry , vol.38 , pp. 2956-2968
    • Xie, X.M.1    Geacintov, N.E.2    Broyde, S.3
  • 55
    • 0036382913 scopus 로고    scopus 로고
    • Toward understanding the mutagenicity of an environmental carcinogen: Structural insights into nucleotide incorporation preferences
    • Perlow, R. A., and Broyde, S. (2002) Toward understanding the mutagenicity of an environmental carcinogen: Structural insights into nucleotide incorporation preferences. J. Mol. Biol. 322, 291-309.
    • (2002) J. Mol. Biol. , vol.322 , pp. 291-309
    • Perlow, R.A.1    Broyde, S.2
  • 57
    • 33847724386 scopus 로고    scopus 로고
    • Increased flexibility enhances misincorporation: Temperature effects on nucleotide incorporation opposite a bulky carcinogen-DNA adduct by a Y-family DNA polymerase
    • Perlow-Poehnelt, R. A., Likhterov, I., Wang, L., Scicchitano, D. A., Geacintov, N. E., and Broyde, S. (2007) Increased flexibility enhances misincorporation: Temperature effects on nucleotide incorporation opposite a bulky carcinogen-DNA adduct by a Y-family DNA polymerase. J. Biol. Chem. 282, 1397-1408.
    • (2007) J. Biol. Chem. , vol.282 , pp. 1397-1408
    • Perlow-Poehnelt, R.A.1    Likhterov, I.2    Wang, L.3    Scicchitano, D.A.4    Geacintov, N.E.5    Broyde, S.6
  • 58
    • 0025109103 scopus 로고
    • Misalignment-mediated DNA synthesis errors
    • Kunkel, T. A. (1990) Misalignment-mediated DNA synthesis errors. Biochemistry 29, 8003-8011.
    • (1990) Biochemistry , vol.29 , pp. 8003-8011
    • Kunkel, T.A.1
  • 59
    • 0025630591 scopus 로고
    • Frameshift mutation: Determinants of specificity
    • Ripley, L. S. (1990) Frameshift mutation: Determinants of specificity. Annu. Rev. Genet. 24, 189-213.
    • (1990) Annu. Rev. Genet. , vol.24 , pp. 189-213
    • Ripley, L.S.1
  • 60
    • 33645984577 scopus 로고    scopus 로고
    • Magnesium-induced assembly of a complete DNA polymerase catalytic complex
    • Batra, V. K., Beard, W. A., Shock, D. D., Krahn, J. M., Pedersen, L. C., and Wilson, S. H. (2006) Magnesium-induced assembly of a complete DNA polymerase catalytic complex. Structure 14, 757-766.
    • (2006) Structure , vol.14 , pp. 757-766
    • Batra, V.K.1    Beard, W.A.2    Shock, D.D.3    Krahn, J.M.4    Pedersen, L.C.5    Wilson, S.H.6
  • 61
    • 34247549227 scopus 로고    scopus 로고
    • A watermediated and substrate-assisted catalytic mechanism for Sulfolobus solfataricus DNA polymerase IV
    • Wang, L., Yu, X., Hu, P., Broyde, S., and Zhang, Y. (2007) A watermediated and substrate-assisted catalytic mechanism for Sulfolobus solfataricus DNA polymerase IV. J. Am. Chem. Soc. 129, 4731-4737.
    • (2007) J. Am. Chem. Soc. , vol.129 , pp. 4731-4737
    • Wang, L.1    Yu, X.2    Hu, P.3    Broyde, S.4    Zhang, Y.5
  • 62
    • 0026639873 scopus 로고
    • DNA replication fidelity
    • Kunkel, T. A. (1992) DNA replication fidelity. J. Biol. Chem. 267, 18251-18254.
    • (1992) J. Biol. Chem. , vol.267 , pp. 18251-18254
    • Kunkel, T.A.1


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.