메뉴 건너뛰기




Volumn 14, Issue 4, 2008, Pages 263-290

Physical optics basis for the X-ray phase imaging of low contrast samples: A primer

Author keywords

Coherent diffractive imaging; Phase contrast; X ray imaging; X ray phase imaging

Indexed keywords

DIFFRACTION; HOLOGRAMS; HOLOGRAPHIC INTERFEROMETRY; LIGHT; OPTICAL PROPERTIES; REFRACTIVE INDEX; TERMINOLOGY; WATER ABSORPTION; X RAY ANALYSIS; X RAYS;

EID: 57349153068     PISSN: 0889311X     EISSN: 14763508     Source Type: Journal    
DOI: 10.1080/08893110802531806     Document Type: Review
Times cited : (2)

References (101)
  • 1
    • 57349189634 scopus 로고
    • accessed through Project Gutenberg Aug 5
    • Hooke, R. Micrographia, 1665. Observation 18, http://www.gutenberg.org/ files/15491/15491-h/15491-h.htm (accessed through Project Gutenberg Aug 5, 2008).
    • (1665) Observation , vol.18
    • Hooke, R.M.1
  • 2
    • 38949216802 scopus 로고    scopus 로고
    • Three-Dimensional Super-Resolution Imaging by Stochastic Optical Reconstruction Microscopy
    • Huang, B.; Wang, W.; Bates, M.; Zhuang, X. Three-Dimensional Super-Resolution Imaging by Stochastic Optical Reconstruction Microscopy. Science 2008, 319, 810-813.
    • (2008) Science , vol.319 , pp. 810-813
    • Huang, B.1    Wang, W.2    Bates, M.3    Zhuang, X.4
  • 4
    • 40649109074 scopus 로고    scopus 로고
    • Expedited Approaches to Whole Cell Electron Tomography and Organelle Mark-up In Situ in High-Pressure Frozen Pancreatic Islets
    • Noske, A.B.; Costin, A.J.; Morgan, G.P.; Marsh, B.J. Expedited Approaches to Whole Cell Electron Tomography and Organelle Mark-up In Situ in High-Pressure Frozen Pancreatic Islets. J. Struct. Biol. 2008, 161, 298-313.
    • (2008) J. Struct. Biol , vol.161 , pp. 298-313
    • Noske, A.B.1    Costin, A.J.2    Morgan, G.P.3    Marsh, B.J.4
  • 5
    • 21744452342 scopus 로고    scopus 로고
    • Soft X-ray Microscopy at a Spatial Resolution better than 15 nm
    • Chao, W.; Harteneck, B.D.; Liddle, J.A.; Anderson, E.H.; Attwood, D.T. Soft X-ray Microscopy at a Spatial Resolution better than 15 nm. Nature 2005, 435, 1210-1213.
    • (2005) Nature , vol.435 , pp. 1210-1213
    • Chao, W.1    Harteneck, B.D.2    Liddle, J.A.3    Anderson, E.H.4    Attwood, D.T.5
  • 7
    • 77957722675 scopus 로고    scopus 로고
    • Phase Retrieval Using The Transport Of Intensity Equation
    • Academic Press Inc: London
    • Paganin, D.; Nugent, K.A. Phase Retrieval Using The Transport Of Intensity Equation. Ch 2 in Advances in Imaging and Electron Physics; Academic Press Inc: London, 2001; Vol. 118, pp. 85-127.
    • (2001) Ch 2 in Advances in Imaging and Electron Physics , vol.118 , pp. 85-127
    • Paganin, D.1    Nugent, K.A.2
  • 8
    • 0036111224 scopus 로고    scopus 로고
    • Perspectives On Single Molecule Diffraction using the X-ray Free Electron Laser
    • Webster, G.; Hilgenfeld, R. Perspectives On Single Molecule Diffraction using the X-ray Free Electron Laser. Single Molecules 2002, 3, 63-68.
    • (2002) Single Molecules , vol.3 , pp. 63-68
    • Webster, G.1    Hilgenfeld, R.2
  • 10
    • 2942701957 scopus 로고    scopus 로고
    • Phase-sensitive Imaging and Phase Tomography using X-ray Interferometers
    • Momose, A. Phase-sensitive Imaging and Phase Tomography using X-ray Interferometers. Opt. Express. 2003, 11, 2303-2314.
    • (2003) Opt. Express , vol.11 , pp. 2303-2314
    • Momose, A.1
  • 12
    • 36048984386 scopus 로고    scopus 로고
    • X-ray Nanotomography
    • Withers, P.J. X-ray Nanotomography. Materials Today 2007, 10, 26-34.
    • (2007) Materials Today , vol.10 , pp. 26-34
    • Withers, P.J.1
  • 13
    • 33847305023 scopus 로고    scopus 로고
    • X-ray Noninterferometric Phase Imaging: A Unified Picture
    • Nugent, K.A. X-ray Noninterferometric Phase Imaging: A Unified Picture. J. Opt. Soc. Am. A. 2007, 24, 536-547.
    • (2007) J. Opt. Soc. Am. A , vol.24 , pp. 536-547
    • Nugent, K.A.1
  • 15
    • 43949130424 scopus 로고    scopus 로고
    • Extending X-ray Crystallography to Allow the Imaging of Noncrystalline Materials, Cells, and Single Protein Complexes
    • Miao, J.; Ishikawa, T.; Shen, Q.; Earnest, T. Extending X-ray Crystallography to Allow the Imaging of Noncrystalline Materials, Cells, and Single Protein Complexes. Annu. Rev. Phys. Chem. 2008, 59, 387-410.
    • (2008) Annu. Rev. Phys. Chem , vol.59 , pp. 387-410
    • Miao, J.1    Ishikawa, T.2    Shen, Q.3    Earnest, T.4
  • 17
    • 0000294229 scopus 로고    scopus 로고
    • Non-Interferometric Phase Imaging with Partially-Coherent Light
    • Paganin, D.; Nugent, K.A. Non-Interferometric Phase Imaging with Partially-Coherent Light. Phys. Rev. Lett. 1998, 80, 2586-2589.
    • (1998) Phys. Rev. Lett , vol.80 , pp. 2586-2589
    • Paganin, D.1    Nugent, K.A.2
  • 20
    • 48149089627 scopus 로고    scopus 로고
    • A Coherence Approach to Phase-Contrast Microscopy: Theory
    • Nugent, K.A.; Arhatari, B.D.; Peele, A.G. A Coherence Approach to Phase-Contrast Microscopy: Theory. Ultramicroscopy 2008, 108, 937-945.
    • (2008) Ultramicroscopy , vol.108 , pp. 937-945
    • Nugent, K.A.1    Arhatari, B.D.2    Peele, A.G.3
  • 24
    • 20444449721 scopus 로고    scopus 로고
    • Phase Contrast Radiography: Image Modelling and Optimization
    • Arhatari, B.; Mancuso, A.P.; Peele, A.G.; Nugent, K.A. Phase Contrast Radiography: Image Modelling and Optimization. Rev. Sci. Instrum. 2004, 75, 5271-5276.
    • (2004) Rev. Sci. Instrum , vol.75 , pp. 5271-5276
    • Arhatari, B.1    Mancuso, A.P.2    Peele, A.G.3    Nugent, K.A.4
  • 26
    • 0028821597 scopus 로고
    • Phase-Contrast Imaging Of Weakly Absorbing Materials Using Hard X-rays
    • Davis, T.J.; Gao, D.; Gureyev, T.E.; Stevenson, A.W.; Wilkins, S.W. Phase-Contrast Imaging Of Weakly Absorbing Materials Using Hard X-rays. Nature 1995, 373, 595-598.
    • (1995) Nature , vol.373 , pp. 595-598
    • Davis, T.J.1    Gao, D.2    Gureyev, T.E.3    Stevenson, A.W.4    Wilkins, S.W.5
  • 28
    • 0001349074 scopus 로고
    • An X-ray Interferometer
    • Bonse, U.; Hart, M. An X-ray Interferometer. Appl. Phys. Lett. 1965, 6, 155-157.
    • (1965) Appl. Phys. Lett , vol.6 , pp. 155-157
    • Bonse, U.1    Hart, M.2
  • 29
    • 36449004008 scopus 로고
    • Phase-contrast X-ray Computed Tomography for Observing Biological Specimens and Organic Materials
    • Momose, A,; Takeda, T.; Itai, Y. Phase-contrast X-ray Computed Tomography for Observing Biological Specimens and Organic Materials. Rev. Sci. Instrum. 1995, 66, 1434-1436.
    • (1995) Rev. Sci. Instrum , vol.66 , pp. 1434-1436
    • Momose, A.1    Takeda, T.2    Itai, Y.3
  • 32
    • 0001985187 scopus 로고
    • Phase Contrast X-ray Microscopy - Experiments at the BESSY Storage Ring
    • Springer-Verlag: Berlin
    • Schmahl, G.; Rudolph, D.; Guttmann, P. Phase Contrast X-ray Microscopy - Experiments at the BESSY Storage Ring. X-ray Microscopy II; Springer-Verlag: Berlin, 1988; pp. 228-232.
    • (1988) X-ray Microscopy II , pp. 228-232
    • Schmahl, G.1    Rudolph, D.2    Guttmann, P.3
  • 33
    • 84984376267 scopus 로고
    • Double Crystal Diffractometry for the Characterization of Targets for Laser Fusion Experiments
    • Forster, E.; Goetz, K.; Zaumseil, P. Double Crystal Diffractometry for the Characterization of Targets for Laser Fusion Experiments. Krist. Tech. 1980, 15, 937-945.
    • (1980) Krist. Tech , vol.15 , pp. 937-945
    • Forster, E.1    Goetz, K.2    Zaumseil, P.3
  • 35
    • 0029532089 scopus 로고
    • On the Possibilities of X-ray Phase Contrast Microimaging by Coherent High-energy Synchrotron Radiation
    • Snigerev, A.; Snigereva, I.; Kohn, V.; Kuznetsov, S.; Schelokov, I. On the Possibilities of X-ray Phase Contrast Microimaging by Coherent High-energy Synchrotron Radiation. Rev. Sci. Instrum. 1995, 66, 5486-5492.
    • (1995) Rev. Sci. Instrum , vol.66 , pp. 5486-5492
    • Snigerev, A.1    Snigereva, I.2    Kohn, V.3    Kuznetsov, S.4    Schelokov, I.5
  • 36
    • 37849046889 scopus 로고    scopus 로고
    • Phase Contrast, Phase Retrieval and Aberration Balancing in Shift-Invariant Linear Imaging Systems
    • Paganin, D.; Gureyev, T.E. Phase Contrast, Phase Retrieval and Aberration Balancing in Shift-Invariant Linear Imaging Systems. Optics Commun. 2008, 281, 965-981.
    • (2008) Optics Commun , vol.281 , pp. 965-981
    • Paganin, D.1    Gureyev, T.E.2
  • 39
    • 0020849487 scopus 로고
    • Deterministic Phase Retrieval - A Green-Function Solution
    • Teague, M.R. Deterministic Phase Retrieval - A Green-Function Solution. J. Opt. Soc. Am. 1983, 73, 1434-1441.
    • (1983) J. Opt. Soc. Am , vol.73 , pp. 1434-1441
    • Teague, M.R.1
  • 40
    • 84975661885 scopus 로고
    • Partially Coherent Fields, the Transport-of-Intensity Equation, and Phase Uniqueness
    • Gureyev, T.E.; Roberts, A.; Nugent, K.A. Partially Coherent Fields, the Transport-of-Intensity Equation, and Phase Uniqueness. J. Opt. Soc. Am. A 1995, 12, 1942-1946.
    • (1995) J. Opt. Soc. Am. A , vol.12 , pp. 1942-1946
    • Gureyev, T.E.1    Roberts, A.2    Nugent, K.A.3
  • 42
    • 0000294229 scopus 로고    scopus 로고
    • Non-interferometric Phase Imaging with Partially-Coherent Light
    • Paganin, D.; Nugent, K.A. Non-interferometric Phase Imaging with Partially-Coherent Light. Phys. Rev. Lett. 1998, 80, 2586-2589.
    • (1998) Phys. Rev. Lett , vol.80 , pp. 2586-2589
    • Paganin, D.1    Nugent, K.A.2
  • 47
    • 57349151156 scopus 로고    scopus 로고
    • Turner, L.D. PhD Thesis, University of Melbourne, 2005.
    • Turner, L.D. PhD Thesis, University of Melbourne, 2005.
  • 50
    • 57349160837 scopus 로고    scopus 로고
    • http://nobelprize.org/nobel-prizes/physics/laureates/1914/laue-lecture. pdf.
  • 51
    • 0003972070 scopus 로고    scopus 로고
    • 7th ed, Cambridge University Press: Cambridge
    • Born, M.; Wolf, E. Principles of Optics, 7th ed./ Cambridge University Press: Cambridge, 1999.
    • (1999) Principles of Optics
    • Born, M.1    Wolf, E.2
  • 52
    • 0000746026 scopus 로고
    • A New Type of 'X-ray Microscope,'
    • Bragg, W.L. A New Type of 'X-ray Microscope,'. Nature 1939, 143, 678.
    • (1939) Nature , vol.143 , pp. 678
    • Bragg, W.L.1
  • 53
    • 57349196618 scopus 로고    scopus 로고
    • Jenkins J.; William and Lawrence Bragg, Father and Son: the most extraordinary collaboration in science; Oxford University Press: Oxford, 2008, pp. 355 (citing Bragg, W.H.; X-rays and crystal structure, Philos. Trans. R. Soc., 1915, 215A, 253-274).
    • Jenkins J.; William and Lawrence Bragg, Father and Son: the most extraordinary collaboration in science; Oxford University Press: Oxford, 2008, pp. 355 (citing Bragg, W.H.; X-rays and crystal structure, Philos. Trans. R. Soc., 1915, 215A, 253-274).
  • 54
    • 57349084904 scopus 로고
    • Optically Reciprocal Gratings and their Application to Synthesis of Fourier Series
    • Buerger, M.J. Optically Reciprocal Gratings and their Application to Synthesis of Fourier Series. Proc. Nat. Acad. Sci. 1941, 27, 117-124.
    • (1941) Proc. Nat. Acad. Sci , vol.27 , pp. 117-124
    • Buerger, M.J.1
  • 56
    • 0034495818 scopus 로고    scopus 로고
    • On Possible Extensions of X-ray Crystallography Through Diffraction-Pattern Oversampling
    • Miao, J.; Sayre, D. On Possible Extensions of X-ray Crystallography Through Diffraction-Pattern Oversampling. Acta Crystaltogr. 2000, D56, 1312-1315.
    • (2000) Acta Crystaltogr , vol.D56 , pp. 1312-1315
    • Miao, J.1    Sayre, D.2
  • 62
    • 0000433073 scopus 로고
    • Some Implications of a Theorem due to Shannon
    • Sayre, D. Some Implications of a Theorem due to Shannon. Acta Cryst. 1952, 5, 843.
    • (1952) Acta Cryst , vol.5 , pp. 843
    • Sayre, D.1
  • 63
    • 57349176169 scopus 로고    scopus 로고
    • Sayre, D. Prospects for Long Wavelength X-ray Microscopy and Diffraction. In Imaging Processes and Coherence in Physics; Schlenker, M., Fink, M., Goedgebuer, J.P., Malgrange, C., Vienot, J.C, Wade, R.H., Eds.; Springer Lect. Notes Phys, Springer: Berlin, 1980; 112, pp. 229-235.
    • Sayre, D. Prospects for Long Wavelength X-ray Microscopy and Diffraction. In Imaging Processes and Coherence in Physics; Schlenker, M., Fink, M., Goedgebuer, J.P., Malgrange, C., Vienot, J.C, Wade, R.H., Eds.; Springer Lect. Notes Phys, Springer: Berlin, 1980; Vol. 112, pp. 229-235.
  • 64
    • 0020141837 scopus 로고
    • Fourier Phase Problems are Uniquely Solvable in More Than One Dimension. 1, Underlying Theory
    • Bates, R.H.T. Fourier Phase Problems are Uniquely Solvable in More Than One Dimension. 1, Underlying Theory. Optik 1982, 61, 247-262.
    • (1982) Optik , vol.61 , pp. 247-262
    • Bates, R.H.T.1
  • 65
    • 13844266776 scopus 로고    scopus 로고
    • Relaxed Averaging Alternating Reflections for Diffraction Imaging
    • Luke, D.R. Relaxed Averaging Alternating Reflections for Diffraction Imaging. Inverse Problems 2005, 21, 37-50.
    • (2005) Inverse Problems , vol.21 , pp. 37-50
    • Luke, D.R.1
  • 66
    • 34047097896 scopus 로고    scopus 로고
    • Unified Evaluation of Iterative Projection Algorithms for Phase Retrieval
    • Marchesini, S.A. Unified Evaluation of Iterative Projection Algorithms for Phase Retrieval. Rev. Sci. Instrum. 2007, 78, 011301.
    • (2007) Rev. Sci. Instrum , vol.78 , pp. 011301
    • Marchesini, S.A.1
  • 67
    • 0017985106 scopus 로고
    • Reconstruction of an Object from the Modulus of its Fourier Transform
    • Fienup, J.R. Reconstruction of an Object from the Modulus of its Fourier Transform. Opt. Lett. 1978, 3, 27-29.
    • (1978) Opt. Lett , vol.3 , pp. 27-29
    • Fienup, J.R.1
  • 68
    • 0020173780 scopus 로고
    • Phase Retrieval Algorithms: A Comparison
    • Fienup, J.R. Phase Retrieval Algorithms: A Comparison. Appl. Opt. 1982, 21, 2758-2769.
    • (1982) Appl. Opt , vol.21 , pp. 2758-2769
    • Fienup, J.R.1
  • 69
    • 84975597896 scopus 로고
    • Phase Retrieval in Crystallography and Optics
    • Millane, R.P. Phase Retrieval in Crystallography and Optics. J. Opt. Soc. Am. A. 1990, 7, 394-411.
    • (1990) J. Opt. Soc. Am. A , vol.7 , pp. 394-411
    • Millane, R.P.1
  • 71
    • 22144491146 scopus 로고    scopus 로고
    • Iterative Image Reconstruction Algorithms using Wavefront Intensity and Phase Variation
    • Quiney, H.M.; Nugent, K.A.; Peele, A.G. Iterative Image Reconstruction Algorithms using Wavefront Intensity and Phase Variation. Optics. Lett. 2005, 30, 1638-1640.
    • (2005) Optics. Lett , vol.30 , pp. 1638-1640
    • Quiney, H.M.1    Nugent, K.A.2    Peele, A.G.3
  • 76
    • 0033595278 scopus 로고    scopus 로고
    • Extending the Methodology of X-ray Crystallography to Allow Imaging of Micrometer-sized Non-crystalline Specimens
    • Maio, J.; Charalambous, P.; Kirz, J.; Sayre, D. Extending the Methodology of X-ray Crystallography to Allow Imaging of Micrometer-sized Non-crystalline Specimens. Nature 1999, 400, 342-344.
    • (1999) Nature , vol.400 , pp. 342-344
    • Maio, J.1    Charalambous, P.2    Kirz, J.3    Sayre, D.4
  • 79
    • 0141651998 scopus 로고    scopus 로고
    • Direct Determination of the Absolute Electron Density of Nanostructured and Disordered Materials at Sub-10-nm Resolution
    • Miao, J.; Amonette, J.E.; Nishino, Y.; Ishikawa, T.; Hodgson, K.O. Direct Determination of the Absolute Electron Density of Nanostructured and Disordered Materials at Sub-10-nm Resolution. Phys. Rev. B 2003, 68, 102201.
    • (2003) Phys. Rev. B , vol.68 , pp. 102201
    • Miao, J.1    Amonette, J.E.2    Nishino, Y.3    Ishikawa, T.4    Hodgson, K.O.5
  • 86
    • 33845186032 scopus 로고    scopus 로고
    • Chapman, H.N.; Barty, A.; Bogan, MJ.; Boutet, S.; Frank, M.; Hau-Riege, S.P.; Marchesini, S.; Woods, B.W.; Bajt, S.; Benner, W.H.; London, R.A.; Plönjes, E.; Kuhlmann, M.; Treusch, R.; Düsterer, S.; Tscentscher, T.; Schneider, J.R.; Spiller, E.; Möller, T.; Bostedt, C.; Hoener, M.; Shapiro, D.; Hodgson, K.O.; van der Spoel, D.; Burmeister, F.; Bergh, M.; Caleman, C.; Huldt, G ; Seibert, M.M.; Maia, F.R.N.C.; Lee, R.W.; Szöke, A.; Timneanu, N.; Hajdu, J. Femtosecond Diffractive Imaging with a Soft X-ray Free Electron Laser. Nature Physics 2006, 2, 839-844.
    • Chapman, H.N.; Barty, A.; Bogan, MJ.; Boutet, S.; Frank, M.; Hau-Riege, S.P.; Marchesini, S.; Woods, B.W.; Bajt, S.; Benner, W.H.; London, R.A.; Plönjes, E.; Kuhlmann, M.; Treusch, R.; Düsterer, S.; Tscentscher, T.; Schneider, J.R.; Spiller, E.; Möller, T.; Bostedt, C.; Hoener, M.; Shapiro, D.; Hodgson, K.O.; van der Spoel, D.; Burmeister, F.; Bergh, M.; Caleman, C.; Huldt, G ; Seibert, M.M.; Maia, F.R.N.C.; Lee, R.W.; Szöke, A.; Timneanu, N.; Hajdu, J. Femtosecond Diffractive Imaging with a Soft X-ray Free Electron Laser. Nature Physics 2006, 2, 839-844.
  • 91
    • 11844273891 scopus 로고    scopus 로고
    • Diffractive Imaging of Nonperiodic Materials with Future Coherent X-ray Sources
    • Shen, Q.; Bazarov, I.; Thibault, P. Diffractive Imaging of Nonperiodic Materials with Future Coherent X-ray Sources. J. Synch. Rad. 2004, 11, 432-438.
    • (2004) J. Synch. Rad , vol.11 , pp. 432-438
    • Shen, Q.1    Bazarov, I.2    Thibault, P.3
  • 93
    • 0034680144 scopus 로고    scopus 로고
    • Potential for Biomolecular Imaging with Femtosecond X-ray Pulses
    • Neutze, R.; Wouts, R.; Spoel, D.; Weckert, E.; Hadju, J. Potential for Biomolecular Imaging with Femtosecond X-ray Pulses. Nature 2000, 406, 752-757.
    • (2000) Nature , vol.406 , pp. 752-757
    • Neutze, R.1    Wouts, R.2    Spoel, D.3    Weckert, E.4    Hadju, J.5
  • 97
    • 34547293459 scopus 로고    scopus 로고
    • Encapsulation and Diffraction-Pattern-Correction Methods to Reduce the Effect of Damage in X-ray Diffraction Imaging of Single Biological Molecules
    • Hau-Riege, S.P.; London, R.A.; Chapman, H.N.; Szoke, A. Encapsulation and Diffraction-Pattern-Correction Methods to Reduce the Effect of Damage in X-ray Diffraction Imaging of Single Biological Molecules. Phys. Rev. Lett. 2007, 98, 198302.
    • (2007) Phys. Rev. Lett , vol.98 , pp. 198302
    • Hau-Riege, S.P.1    London, R.A.2    Chapman, H.N.3    Szoke, A.4
  • 100
    • 55349099850 scopus 로고    scopus 로고
    • Spectrum Reconstruction from Young's Double Slit Interference Pattern using the Maximum Entropy Method
    • accepted for publication
    • Dilanian, R.A.; Chen, B.; Teichmann, S.; Dao, L.V.; Quiney, HM,; Nugent, K.A. HHG Spectrum Reconstruction from Young's Double Slit Interference Pattern using the Maximum Entropy Method, Opt. Lett. 2008, accepted for publication.
    • (2008) Opt. Lett
    • Dilanian, R.A.1    Chen, B.2    Teichmann, S.3    Dao, L.V.4    Quiney, H.M.5    Nugent, K.A.H.6


* 이 정보는 Elsevier사의 SCOPUS DB에서 KISTI가 분석하여 추출한 것입니다.